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Refactor adding EDAM ontologies and allowing detect more patterns (e.g., versions.yml)
Fix indentation in included_configs API docs
Co-authored-by: Matthias Zepper <github@mail.matthias-zepper.de>
…for easier testing
* chore(deps): update python:3.12-slim docker digest to fd95fa2 * [automated] Update CHANGELOG.md --------- Co-authored-by: renovate[bot] <29139614+renovate[bot]@users.noreply.github.com> Co-authored-by: nf-core-bot <core@nf-co.re> Co-authored-by: Matthias Hörtenhuber <mashehu@users.noreply.github.com>
Linting: add linting of nf-test files content
Bump version to 3.3.0
…3595) Co-authored-by: renovate[bot] <29139614+renovate[bot]@users.noreply.github.com>
mashehu
reviewed
Jun 2, 2025
mashehu
reviewed
Jun 2, 2025
Comment on lines
+19
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| exclude: | | ||
| (?x)^( | ||
| .*\.snap$| | ||
| nf_core/pipeline-template/subworkflows/.*| | ||
| nf_core/pipeline-template/modules/.*| | ||
| tests/pipelines/__snapshots__/.* | ||
| )$ |
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Suggested change
| exclude: | | |
| (?x)^( | |
| .*\.snap$| | |
| nf_core/pipeline-template/subworkflows/.*| | |
| nf_core/pipeline-template/modules/.*| | |
| tests/pipelines/__snapshots__/.* | |
| )$ | |
| exclude: | | |
| (?x)^( | |
| .*\.snap$| | |
| nf_core/pipeline-template/(subworkflows|modules)/.*| | |
| tests/pipelines/__snapshots__/.* | |
| )$ |
would be a bit more compact.
Remove resourceLimits from nf-test nextflow.config file and use profile instead
Co-authored-by: Júlia Mir Pedrol <mirp.julia@gmail.com>
mashehu
approved these changes
Jun 2, 2025
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Wait until 02/06/2025 for merging!