Search results

Make ro-crate updated with the template README during sync

enhancement

Status: Open.

Enhancement

#3679 In nf-core/tools;

· ningyuxin1999 opened on Jul 15, 2025

schema_params linting is failing when a = is in the args

bugSomething isn't workingSomething isn't working

Status: Open.

#3672 In nf-core/tools;

· maxulysse opened on Jul 9, 2025

Handle pipelines without <code>manifest.contributors</code> in the <code>nextrflow.config</code> during pipeline sync

bugSomething isn't workingSomething isn't working

high-priority

Status: Open.

#3671 In nf-core/tools;

· mirpedrol opened on Jul 9, 2025

Modules yaml schemes don't follow nf-core releases

schema

Status: Open.

#3668 In nf-core/tools;

· AlexVCaron opened on Jul 7, 2025

Enable configurations for module linting

enhancement

Status: Open.

#3656 In nf-core/tools;

· FriederikeHanssen opened on Jul 3, 2025

Allow user names with dots when creating modules

good-first-issue

Status: Open.

#3655 In nf-core/tools;

· FriederikeHanssen opened on Jul 3, 2025

Template: Resume function can lead to inconsistencies in software version reporting

bugSomething isn't workingSomething isn't working

Status: Open.

#3653 In nf-core/tools;

· JohannesKersting opened on Jul 2, 2025

RefTrace trail implementation

linting

Status: Open.

#3651 In nf-core/tools;

· mashehu opened on Jul 1, 2025

Exclude entire directories from linting

enhancement

Status: Open.

#3644 In nf-core/tools;

· rrahn opened on Jun 26, 2025

Pipeline linting: check consistency of .nf-core.yml version

command line toolsAnything to do with the cli interfacesAnything to do with the cli interfaces

enhancement

good-first-issue

linting

Status: Open.

#3620 In nf-core/tools;

· mirpedrol opened on Jun 17, 2025

Template: inconsistency between pipeline_test_database_path parameters

bugSomething isn't workingSomething isn't working

Status: Open.

#3614 In nf-core/tools;

· jfy133 opened on Jun 11, 2025

Template: add official place for 'custom' logos

enhancement

Status: Open.

#3613 In nf-core/tools;

· jfy133 opened on Jun 11, 2025