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Nextflow build from source #3555

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Merged
merged 3 commits into from
Apr 30, 2025
Merged

Nextflow build from source #3555

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4e5efab
Try to fix Nextflow build step
ewels Apr 30, 2025
b5bc0d6
Binary isn't called just 'nextflow'
ewels Apr 30, 2025
43a609b
Merge branch 'dev' into nextflow-build-from-source
ewels Apr 30, 2025
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12 changes: 8 additions & 4 deletions .github/workflows/nextflow-source-test.yml
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Expand Up @@ -36,14 +36,18 @@ jobs:
uses: actions/setup-java@v4
with:
distribution: "temurin"
architecture: x64
cache: gradle
java-version: "21"

- name: Build Nextflow
run: cd nextflow && make pack

- name: Move Nextflow to local bin/
run: |
cd nextflow
./gradlew compile
chmod +x nextflow
echo "$(pwd)" >> $GITHUB_PATH
mkdir -p $HOME/.local/bin/
mv nextflow/build/releases/nextflow*dist $HOME/.local/bin/nextflow
chmod +x $HOME/.local/bin/nextflow
nextflow -version

- name: Install nf-core/tools
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