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fix the nested list bug that makes email not be delivered #3081

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fix the nested list bug that makes email not be delivered #3081

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16 changes: 8 additions & 8 deletions nf_core/pipeline-template/subworkflows/local/utils_nfcore_pipeline_pipeline/main.nf
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Original file line number Diff line number Diff line change
Expand Up @@ -117,13 +117,13 @@ workflow PIPELINE_INITIALISATION {
workflow PIPELINE_COMPLETION {

take:
email // string: email address
email_on_fail // string: email address sent on pipeline failure
plaintext_email // boolean: Send plain-text email instead of HTML
outdir // path: Path to output directory where results will be published
monochrome_logs // boolean: Disable ANSI colour codes in log output
hook_url // string: hook URL for notifications
multiqc_report // string: Path to MultiQC report
email // string: email address
email_on_fail // string: email address sent on pipeline failure
plaintext_email // boolean: Send plain-text email instead of HTML
outdir // path: Path to output directory where results will be published
monochrome_logs // boolean: Disable ANSI colour codes in log output
hook_url // string: hook URL for notifications
multiqc_report // [string]: List of paths to MultiQC report (Note: only the first one will be used)

main:

Expand All @@ -134,7 +134,7 @@ workflow PIPELINE_COMPLETION {
//
workflow.onComplete {
if (email || email_on_fail) {
completionEmail(summary_params, email, email_on_fail, plaintext_email, outdir, monochrome_logs, multiqc_report.toList())
completionEmail(summary_params, email, email_on_fail, plaintext_email, outdir, monochrome_logs, multiqc_report)
}

completionSummary(monochrome_logs)
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