WO2008110301A1 - Variants d'aprotinine à propriétés améliorées - Google Patents
Variants d'aprotinine à propriétés améliorées Download PDFInfo
- Publication number
- WO2008110301A1 WO2008110301A1 PCT/EP2008/001820 EP2008001820W WO2008110301A1 WO 2008110301 A1 WO2008110301 A1 WO 2008110301A1 EP 2008001820 W EP2008001820 W EP 2008001820W WO 2008110301 A1 WO2008110301 A1 WO 2008110301A1
- Authority
- WO
- WIPO (PCT)
- Prior art keywords
- aprotinin
- seq
- bpti
- amino acid
- inhibition
- Prior art date
Links
- 108010039627 Aprotinin Proteins 0.000 title claims abstract description 103
- 229960004405 aprotinin Drugs 0.000 title claims abstract description 80
- ZPNFWUPYTFPOJU-LPYSRVMUSA-N iniprol Chemical compound C([C@H]1C(=O)NCC(=O)NCC(=O)N[C@H]2CSSC[C@H]3C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](C)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@H](C(N[C@H](C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H](CC=4C=CC(O)=CC=4)C(=O)N[C@@H](CC=4C=CC=CC=4)C(=O)N[C@@H](CC=4C=CC(O)=CC=4)C(=O)N[C@@H](CC(N)=O)C(=O)N[C@@H](C)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](C)C(=O)NCC(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CSSC[C@H](NC(=O)[C@H](CC(O)=O)NC(=O)[C@H](CCC(O)=O)NC(=O)[C@H](C)NC(=O)[C@H](CO)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CC=4C=CC=CC=4)NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](CCCNC(N)=N)NC(=O)[C@H](CCCCN)NC(=O)[C@H](C)NC(=O)[C@H](CCCNC(N)=N)NC2=O)C(=O)N[C@@H](CCSC)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@@H](CSSC[C@H](NC(=O)[C@H](CC=2C=CC=CC=2)NC(=O)[C@H](CC(O)=O)NC(=O)[C@H]2N(CCC2)C(=O)[C@@H](N)CCCNC(N)=N)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CCC(O)=O)C(=O)N2[C@@H](CCC2)C(=O)N2[C@@H](CCC2)C(=O)N[C@@H](CC=2C=CC(O)=CC=2)C(=O)N[C@@H]([C@@H](C)O)C(=O)NCC(=O)N2[C@@H](CCC2)C(=O)N3)C(=O)NCC(=O)NCC(=O)N[C@@H](C)C(O)=O)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@H](C(=O)N[C@@H](CC=2C=CC=CC=2)C(=O)N[C@H](C(=O)N1)C(C)C)[C@@H](C)O)[C@@H](C)CC)=O)[C@@H](C)CC)C1=CC=C(O)C=C1 ZPNFWUPYTFPOJU-LPYSRVMUSA-N 0.000 title claims abstract description 78
- 230000035772 mutation Effects 0.000 claims description 6
- 125000000539 amino acid group Chemical group 0.000 abstract description 33
- 230000009260 cross reactivity Effects 0.000 abstract description 12
- 230000005764 inhibitory process Effects 0.000 abstract description 11
- 102000003827 Plasma Kallikrein Human genes 0.000 abstract description 9
- 108090000113 Plasma Kallikrein Proteins 0.000 abstract description 9
- 229940012957 plasmin Drugs 0.000 abstract description 8
- 230000002829 reductive effect Effects 0.000 abstract description 8
- 230000005847 immunogenicity Effects 0.000 abstract description 7
- 102000004190 Enzymes Human genes 0.000 abstract description 6
- 108090000790 Enzymes Proteins 0.000 abstract description 6
- 238000004458 analytical method Methods 0.000 abstract description 6
- 229940088598 enzyme Drugs 0.000 abstract description 6
- 230000018341 negative regulation of fibrinolysis Effects 0.000 abstract description 6
- 230000014508 negative regulation of coagulation Effects 0.000 abstract description 5
- 230000009467 reduction Effects 0.000 abstract description 5
- 210000001744 T-lymphocyte Anatomy 0.000 abstract description 3
- 230000000740 bleeding effect Effects 0.000 abstract description 3
- 230000004054 inflammatory process Effects 0.000 abstract description 3
- 238000004519 manufacturing process Methods 0.000 abstract description 3
- 210000002966 serum Anatomy 0.000 abstract description 2
- -1 amino acid esters Chemical class 0.000 abstract 2
- 230000000052 comparative effect Effects 0.000 abstract 1
- 108090000623 proteins and genes Proteins 0.000 description 20
- 239000000243 solution Substances 0.000 description 19
- 235000018102 proteins Nutrition 0.000 description 17
- 102000004169 proteins and genes Human genes 0.000 description 17
- 210000004027 cell Anatomy 0.000 description 12
- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 10
- 230000000694 effects Effects 0.000 description 10
- 108090000765 processed proteins & peptides Proteins 0.000 description 10
- HEMHJVSKTPXQMS-UHFFFAOYSA-M Sodium hydroxide Chemical compound [OH-].[Na+] HEMHJVSKTPXQMS-UHFFFAOYSA-M 0.000 description 9
- 108090000631 Trypsin Proteins 0.000 description 9
- 102000004142 Trypsin Human genes 0.000 description 9
- 230000002401 inhibitory effect Effects 0.000 description 9
- 238000003752 polymerase chain reaction Methods 0.000 description 9
- 239000012588 trypsin Substances 0.000 description 9
- 238000002703 mutagenesis Methods 0.000 description 8
- 231100000350 mutagenesis Toxicity 0.000 description 8
- 108010088842 Fibrinolysin Proteins 0.000 description 7
- 239000011230 binding agent Substances 0.000 description 7
- 230000015572 biosynthetic process Effects 0.000 description 7
- 238000000855 fermentation Methods 0.000 description 7
- 230000004151 fermentation Effects 0.000 description 7
- 238000011534 incubation Methods 0.000 description 7
- 239000003112 inhibitor Substances 0.000 description 7
- 235000015097 nutrients Nutrition 0.000 description 7
- 102000004196 processed proteins & peptides Human genes 0.000 description 7
- 101150034979 DRB3 gene Proteins 0.000 description 6
- 238000002965 ELISA Methods 0.000 description 6
- 101100278514 Oryza sativa subsp. japonica DRB2 gene Proteins 0.000 description 6
- 239000007983 Tris buffer Substances 0.000 description 6
- 239000002609 medium Substances 0.000 description 6
- 238000012360 testing method Methods 0.000 description 6
- LENZDBCJOHFCAS-UHFFFAOYSA-N tris Chemical compound OCC(N)(CO)CO LENZDBCJOHFCAS-UHFFFAOYSA-N 0.000 description 6
- 108020004414 DNA Proteins 0.000 description 5
- 108700005078 Synthetic Genes Proteins 0.000 description 5
- 150000001413 amino acids Chemical class 0.000 description 5
- 230000015271 coagulation Effects 0.000 description 5
- 238000005345 coagulation Methods 0.000 description 5
- 238000000746 purification Methods 0.000 description 5
- 239000011780 sodium chloride Substances 0.000 description 5
- 239000006228 supernatant Substances 0.000 description 5
- 229940108519 trasylol Drugs 0.000 description 5
- 210000005253 yeast cell Anatomy 0.000 description 5
- CURLTUGMZLYLDI-UHFFFAOYSA-N Carbon dioxide Chemical compound O=C=O CURLTUGMZLYLDI-UHFFFAOYSA-N 0.000 description 4
- LYCAIKOWRPUZTN-UHFFFAOYSA-N Ethylene glycol Chemical compound OCCO LYCAIKOWRPUZTN-UHFFFAOYSA-N 0.000 description 4
- 208000034486 Multi-organ failure Diseases 0.000 description 4
- 102000035195 Peptidases Human genes 0.000 description 4
- 108091005804 Peptidases Proteins 0.000 description 4
- 239000004365 Protease Substances 0.000 description 4
- 240000004808 Saccharomyces cerevisiae Species 0.000 description 4
- 102000003978 Tissue Plasminogen Activator Human genes 0.000 description 4
- 108090000373 Tissue Plasminogen Activator Proteins 0.000 description 4
- 230000004913 activation Effects 0.000 description 4
- 239000007640 basal medium Substances 0.000 description 4
- 238000002474 experimental method Methods 0.000 description 4
- 238000013508 migration Methods 0.000 description 4
- 230000005012 migration Effects 0.000 description 4
- 208000029744 multiple organ dysfunction syndrome Diseases 0.000 description 4
- 210000000440 neutrophil Anatomy 0.000 description 4
- 239000000126 substance Substances 0.000 description 4
- 229960000187 tissue plasminogen activator Drugs 0.000 description 4
- DTQVDTLACAAQTR-UHFFFAOYSA-N trifluoroacetic acid Substances OC(=O)C(F)(F)F DTQVDTLACAAQTR-UHFFFAOYSA-N 0.000 description 4
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 4
- WEVYAHXRMPXWCK-UHFFFAOYSA-N Acetonitrile Chemical compound CC#N WEVYAHXRMPXWCK-UHFFFAOYSA-N 0.000 description 3
- 241000283690 Bos taurus Species 0.000 description 3
- 108091026890 Coding region Proteins 0.000 description 3
- 102000016928 DNA-directed DNA polymerase Human genes 0.000 description 3
- 108010014303 DNA-directed DNA polymerase Proteins 0.000 description 3
- 241000588724 Escherichia coli Species 0.000 description 3
- WQZGKKKJIJFFOK-GASJEMHNSA-N Glucose Natural products OC[C@H]1OC(O)[C@H](O)[C@@H](O)[C@@H]1O WQZGKKKJIJFFOK-GASJEMHNSA-N 0.000 description 3
- PEDCQBHIVMGVHV-UHFFFAOYSA-N Glycerine Chemical compound OCC(O)CO PEDCQBHIVMGVHV-UHFFFAOYSA-N 0.000 description 3
- 206010020751 Hypersensitivity Diseases 0.000 description 3
- 208000010718 Multiple Organ Failure Diseases 0.000 description 3
- FSVCELGFZIQNCK-UHFFFAOYSA-N N,N-bis(2-hydroxyethyl)glycine Chemical compound OCCN(CCO)CC(O)=O FSVCELGFZIQNCK-UHFFFAOYSA-N 0.000 description 3
- 108091028043 Nucleic acid sequence Proteins 0.000 description 3
- 108010000499 Thromboplastin Proteins 0.000 description 3
- 102000002262 Thromboplastin Human genes 0.000 description 3
- 238000003556 assay Methods 0.000 description 3
- 239000007998 bicine buffer Substances 0.000 description 3
- 239000000872 buffer Substances 0.000 description 3
- 238000006243 chemical reaction Methods 0.000 description 3
- 230000035605 chemotaxis Effects 0.000 description 3
- 210000000038 chest Anatomy 0.000 description 3
- 238000003776 cleavage reaction Methods 0.000 description 3
- 238000012217 deletion Methods 0.000 description 3
- 230000037430 deletion Effects 0.000 description 3
- 208000009190 disseminated intravascular coagulation Diseases 0.000 description 3
- 239000008103 glucose Substances 0.000 description 3
- 238000000338 in vitro Methods 0.000 description 3
- 238000005259 measurement Methods 0.000 description 3
- 239000000203 mixture Substances 0.000 description 3
- 238000012986 modification Methods 0.000 description 3
- 230000004048 modification Effects 0.000 description 3
- 239000013612 plasmid Substances 0.000 description 3
- 108091008146 restriction endonucleases Proteins 0.000 description 3
- 230000007017 scission Effects 0.000 description 3
- 239000013606 secretion vector Substances 0.000 description 3
- 229920001817 Agar Polymers 0.000 description 2
- 229920000936 Agarose Polymers 0.000 description 2
- 206010002199 Anaphylactic shock Diseases 0.000 description 2
- 244000258136 Costus speciosus Species 0.000 description 2
- 235000000385 Costus speciosus Nutrition 0.000 description 2
- 208000032843 Hemorrhage Diseases 0.000 description 2
- 101000663639 Homo sapiens Kunitz-type protease inhibitor 2 Proteins 0.000 description 2
- 101001100327 Homo sapiens RNA-binding protein 45 Proteins 0.000 description 2
- 101000653189 Homo sapiens Tissue factor pathway inhibitor Proteins 0.000 description 2
- 102000004890 Interleukin-8 Human genes 0.000 description 2
- 108090001007 Interleukin-8 Proteins 0.000 description 2
- 101100386050 Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) cys-14 gene Proteins 0.000 description 2
- 206010030113 Oedema Diseases 0.000 description 2
- 102100038823 RNA-binding protein 45 Human genes 0.000 description 2
- 102000012479 Serine Proteases Human genes 0.000 description 2
- 108010022999 Serine Proteases Proteins 0.000 description 2
- 208000000453 Skin Neoplasms Diseases 0.000 description 2
- 108090000190 Thrombin Proteins 0.000 description 2
- 102100035140 Vitronectin Human genes 0.000 description 2
- 108010031318 Vitronectin Proteins 0.000 description 2
- 208000009621 actinic keratosis Diseases 0.000 description 2
- 239000008272 agar Substances 0.000 description 2
- 235000001014 amino acid Nutrition 0.000 description 2
- 208000003455 anaphylaxis Diseases 0.000 description 2
- 239000000427 antigen Substances 0.000 description 2
- 108091007433 antigens Proteins 0.000 description 2
- 102000036639 antigens Human genes 0.000 description 2
- 208000034158 bleeding Diseases 0.000 description 2
- 210000004369 blood Anatomy 0.000 description 2
- 239000008280 blood Substances 0.000 description 2
- 230000023555 blood coagulation Effects 0.000 description 2
- 210000004556 brain Anatomy 0.000 description 2
- 229940041514 candida albicans extract Drugs 0.000 description 2
- 229910002092 carbon dioxide Inorganic materials 0.000 description 2
- 230000003197 catalytic effect Effects 0.000 description 2
- 230000001413 cellular effect Effects 0.000 description 2
- 238000005119 centrifugation Methods 0.000 description 2
- 230000007012 clinical effect Effects 0.000 description 2
- 238000010367 cloning Methods 0.000 description 2
- 230000035602 clotting Effects 0.000 description 2
- 230000002860 competitive effect Effects 0.000 description 2
- 238000000502 dialysis Methods 0.000 description 2
- 238000000605 extraction Methods 0.000 description 2
- 239000007850 fluorescent dye Substances 0.000 description 2
- 239000001963 growth medium Substances 0.000 description 2
- 238000004128 high performance liquid chromatography Methods 0.000 description 2
- 102000052154 human SPINT2 Human genes 0.000 description 2
- 238000011081 inoculation Methods 0.000 description 2
- 238000003780 insertion Methods 0.000 description 2
- 230000037431 insertion Effects 0.000 description 2
- 210000000265 leukocyte Anatomy 0.000 description 2
- 238000004949 mass spectrometry Methods 0.000 description 2
- 239000012528 membrane Substances 0.000 description 2
- 239000002504 physiological saline solution Substances 0.000 description 2
- 229920001223 polyethylene glycol Polymers 0.000 description 2
- 230000003389 potentiating effect Effects 0.000 description 2
- 238000002741 site-directed mutagenesis Methods 0.000 description 2
- 201000000849 skin cancer Diseases 0.000 description 2
- 238000001228 spectrum Methods 0.000 description 2
- 239000000758 substrate Substances 0.000 description 2
- 208000024891 symptom Diseases 0.000 description 2
- 238000002560 therapeutic procedure Methods 0.000 description 2
- 229960004072 thrombin Drugs 0.000 description 2
- 230000009466 transformation Effects 0.000 description 2
- 239000013598 vector Substances 0.000 description 2
- 239000012138 yeast extract Substances 0.000 description 2
- HMPUHXCGUHDVBI-UHFFFAOYSA-N 5-methyl-1,3,4-thiadiazol-2-amine Chemical compound CC1=NN=C(N)S1 HMPUHXCGUHDVBI-UHFFFAOYSA-N 0.000 description 1
- 241000242759 Actiniaria Species 0.000 description 1
- 206010002388 Angina unstable Diseases 0.000 description 1
- 206010003694 Atrophy Diseases 0.000 description 1
- 206010004146 Basal cell carcinoma Diseases 0.000 description 1
- 108010081589 Becaplermin Proteins 0.000 description 1
- 206010048962 Brain oedema Diseases 0.000 description 1
- 206010008111 Cerebral haemorrhage Diseases 0.000 description 1
- 229910021591 Copper(I) chloride Inorganic materials 0.000 description 1
- FBPFZTCFMRRESA-FSIIMWSLSA-N D-Glucitol Natural products OC[C@H](O)[C@H](O)[C@@H](O)[C@H](O)CO FBPFZTCFMRRESA-FSIIMWSLSA-N 0.000 description 1
- 238000001712 DNA sequencing Methods 0.000 description 1
- 206010051055 Deep vein thrombosis Diseases 0.000 description 1
- ZGTMUACCHSMWAC-UHFFFAOYSA-L EDTA disodium salt (anhydrous) Chemical compound [Na+].[Na+].OC(=O)CN(CC([O-])=O)CCN(CC(O)=O)CC([O-])=O ZGTMUACCHSMWAC-UHFFFAOYSA-L 0.000 description 1
- 208000005189 Embolism Diseases 0.000 description 1
- 241000620209 Escherichia coli DH5[alpha] Species 0.000 description 1
- 206010016654 Fibrosis Diseases 0.000 description 1
- 241000282412 Homo Species 0.000 description 1
- 206010061218 Inflammation Diseases 0.000 description 1
- 206010027476 Metastases Diseases 0.000 description 1
- 208000004221 Multiple Trauma Diseases 0.000 description 1
- 208000023637 Multiple injury Diseases 0.000 description 1
- 241001223904 Nudibranchia Species 0.000 description 1
- 108091034117 Oligonucleotide Proteins 0.000 description 1
- 238000009004 PCR Kit Methods 0.000 description 1
- 208000002193 Pain Diseases 0.000 description 1
- 239000001888 Peptone Substances 0.000 description 1
- 108010080698 Peptones Proteins 0.000 description 1
- 239000002202 Polyethylene glycol Substances 0.000 description 1
- 101710093543 Probable non-specific lipid-transfer protein Proteins 0.000 description 1
- 239000012980 RPMI-1640 medium Substances 0.000 description 1
- 206010040047 Sepsis Diseases 0.000 description 1
- 238000012300 Sequence Analysis Methods 0.000 description 1
- 206010063036 Spinal cord oedema Diseases 0.000 description 1
- 208000006011 Stroke Diseases 0.000 description 1
- 208000007814 Unstable Angina Diseases 0.000 description 1
- 206010047249 Venous thrombosis Diseases 0.000 description 1
- 241000251539 Vertebrata <Metazoa> Species 0.000 description 1
- 238000002441 X-ray diffraction Methods 0.000 description 1
- JLCPHMBAVCMARE-UHFFFAOYSA-N [3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methyl [5-(6-aminopurin-9-yl)-2-(hydroxymethyl)oxolan-3-yl] hydrogen phosphate Polymers Cc1cn(C2CC(OP(O)(=O)OCC3OC(CC3OP(O)(=O)OCC3OC(CC3O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c3nc(N)[nH]c4=O)C(COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3CO)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cc(C)c(=O)[nH]c3=O)n3cc(C)c(=O)[nH]c3=O)n3ccc(N)nc3=O)n3cc(C)c(=O)[nH]c3=O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)O2)c(=O)[nH]c1=O JLCPHMBAVCMARE-UHFFFAOYSA-N 0.000 description 1
- 238000010521 absorption reaction Methods 0.000 description 1
- 206010000496 acne Diseases 0.000 description 1
- 239000004480 active ingredient Substances 0.000 description 1
- 239000011543 agarose gel Substances 0.000 description 1
- 229940008201 allegra Drugs 0.000 description 1
- 208000030961 allergic reaction Diseases 0.000 description 1
- 230000001567 anti-fibrinolytic effect Effects 0.000 description 1
- ZPNFWUPYTFPOJU-MPSLMFKFSA-N aprotinin Chemical compound CC[C@H](C)[C@@H]1NC(=O)[C@@H](CCCNC(N)=N)NC(=O)[C@@H](C)NC(=O)[C@H](CCCCN)NC(=O)[C@@H]2CSSC[C@H]3NC(=O)CNC(=O)CNC(=O)[C@H](Cc4ccc(O)cc4)NC(=O)[C@H](NC(=O)[C@H](Cc4ccccc4)NC(=O)[C@@H](NC(=O)[C@H](CCC(N)=O)NC(=O)[C@@H](CSSC[C@@H](NC(=O)[C@H](CC(O)=O)NC(=O)[C@@H](CCC(O)=O)NC(=O)[C@H](C)NC(=O)[C@@H](CO)NC(=O)[C@H](CCCCN)NC(=O)[C@@H](Cc4ccccc4)NC(=O)[C@H](CC(N)=O)NC(=O)[C@@H](CC(N)=O)NC(=O)[C@H](CCCNC(N)=N)NC(=O)[C@@H](CCCCN)NC(=O)[C@H](C)NC(=O)[C@H](CCCNC(N)=N)NC3=O)C(=O)N[C@H](CCSC)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@H](CSSC[C@@H](NC(=O)[C@H](Cc3ccccc3)NC(=O)[C@@H](CC(O)=O)NC(=O)[C@H]3CCCN3C(=O)[C@H](N)CCCNC(N)=N)C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](CCC(O)=O)C(=O)N3CCC[C@@H]3C(=O)N3CCC[C@H]3C(=O)N[C@H](Cc3ccc(O)cc3)C(=O)N[C@H]([C@H](C)O)C(=O)NCC(=O)N3CCC[C@H]3C(=O)N2)C(=O)NCC(=O)NCC(=O)N[C@H](C)C(O)=O)NC(=O)[C@@H](CC(C)C)NC(=O)CNC(=O)[C@@H](C)NC(=O)[C@H](CCCCN)NC(=O)[C@@H](C)NC(=O)[C@H](CC(N)=O)NC(=O)[C@@H](Cc2ccc(O)cc2)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@@H](Cc2ccc(O)cc2)NC(=O)[C@H](CCCNC(N)=N)NC(=O)[C@H](NC1=O)[C@H](C)CC)[C@@H](C)O)C(C)C ZPNFWUPYTFPOJU-MPSLMFKFSA-N 0.000 description 1
- 239000012131 assay buffer Substances 0.000 description 1
- 208000006673 asthma Diseases 0.000 description 1
- 230000037444 atrophy Effects 0.000 description 1
- 238000010256 biochemical assay Methods 0.000 description 1
- 229960000074 biopharmaceutical Drugs 0.000 description 1
- 208000006752 brain edema Diseases 0.000 description 1
- 210000004899 c-terminal region Anatomy 0.000 description 1
- 239000001569 carbon dioxide Substances 0.000 description 1
- 238000007675 cardiac surgery Methods 0.000 description 1
- 230000020411 cell activation Effects 0.000 description 1
- 239000013553 cell monolayer Substances 0.000 description 1
- 230000004663 cell proliferation Effects 0.000 description 1
- 238000012512 characterization method Methods 0.000 description 1
- 239000011248 coating agent Substances 0.000 description 1
- 238000000576 coating method Methods 0.000 description 1
- 238000001816 cooling Methods 0.000 description 1
- OXBLHERUFWYNTN-UHFFFAOYSA-M copper(I) chloride Chemical compound [Cu]Cl OXBLHERUFWYNTN-UHFFFAOYSA-M 0.000 description 1
- 208000035250 cutaneous malignant susceptibility to 1 melanoma Diseases 0.000 description 1
- 208000031513 cyst Diseases 0.000 description 1
- 125000000151 cysteine group Chemical group N[C@@H](CS)C(=O)* 0.000 description 1
- 230000009089 cytolysis Effects 0.000 description 1
- 238000004925 denaturation Methods 0.000 description 1
- 230000036425 denaturation Effects 0.000 description 1
- 238000001212 derivatisation Methods 0.000 description 1
- 210000004207 dermis Anatomy 0.000 description 1
- 238000001514 detection method Methods 0.000 description 1
- 238000010790 dilution Methods 0.000 description 1
- 239000012895 dilution Substances 0.000 description 1
- 239000013024 dilution buffer Substances 0.000 description 1
- 201000010099 disease Diseases 0.000 description 1
- 208000037265 diseases, disorders, signs and symptoms Diseases 0.000 description 1
- 238000010494 dissociation reaction Methods 0.000 description 1
- 230000005593 dissociations Effects 0.000 description 1
- VHJLVAABSRFDPM-QWWZWVQMSA-N dithiothreitol Chemical compound SC[C@@H](O)[C@H](O)CS VHJLVAABSRFDPM-QWWZWVQMSA-N 0.000 description 1
- 231100000673 dose–response relationship Toxicity 0.000 description 1
- 238000007876 drug discovery Methods 0.000 description 1
- 230000002255 enzymatic effect Effects 0.000 description 1
- 238000011156 evaluation Methods 0.000 description 1
- 230000005284 excitation Effects 0.000 description 1
- 230000007717 exclusion Effects 0.000 description 1
- 239000012527 feed solution Substances 0.000 description 1
- 230000020764 fibrinolysis Effects 0.000 description 1
- 239000003527 fibrinolytic agent Substances 0.000 description 1
- 230000003480 fibrinolytic effect Effects 0.000 description 1
- 230000004761 fibrosis Effects 0.000 description 1
- 239000012634 fragment Substances 0.000 description 1
- 239000000499 gel Substances 0.000 description 1
- 230000002068 genetic effect Effects 0.000 description 1
- 238000010353 genetic engineering Methods 0.000 description 1
- 230000012010 growth Effects 0.000 description 1
- PJJJBBJSCAKJQF-UHFFFAOYSA-N guanidinium chloride Chemical compound [Cl-].NC(N)=[NH2+] PJJJBBJSCAKJQF-UHFFFAOYSA-N 0.000 description 1
- 230000036541 health Effects 0.000 description 1
- 210000002216 heart Anatomy 0.000 description 1
- 230000002439 hemostatic effect Effects 0.000 description 1
- 229940094991 herring sperm dna Drugs 0.000 description 1
- 230000008348 humoral response Effects 0.000 description 1
- 230000001900 immune effect Effects 0.000 description 1
- 208000015181 infectious disease Diseases 0.000 description 1
- 208000027866 inflammatory disease Diseases 0.000 description 1
- 230000002757 inflammatory effect Effects 0.000 description 1
- 208000014674 injury Diseases 0.000 description 1
- 230000003993 interaction Effects 0.000 description 1
- 201000004332 intermediate coronary syndrome Diseases 0.000 description 1
- PGLTVOMIXTUURA-UHFFFAOYSA-N iodoacetamide Chemical compound NC(=O)CI PGLTVOMIXTUURA-UHFFFAOYSA-N 0.000 description 1
- 150000002500 ions Chemical class 0.000 description 1
- 238000002955 isolation Methods 0.000 description 1
- 210000004185 liver Anatomy 0.000 description 1
- 210000004072 lung Anatomy 0.000 description 1
- 201000001441 melanoma Diseases 0.000 description 1
- 230000009401 metastasis Effects 0.000 description 1
- 238000010232 migration assay Methods 0.000 description 1
- 238000002156 mixing Methods 0.000 description 1
- 201000006417 multiple sclerosis Diseases 0.000 description 1
- 208000010125 myocardial infarction Diseases 0.000 description 1
- 210000004897 n-terminal region Anatomy 0.000 description 1
- 238000000424 optical density measurement Methods 0.000 description 1
- 230000003287 optical effect Effects 0.000 description 1
- 210000000056 organ Anatomy 0.000 description 1
- 230000008816 organ damage Effects 0.000 description 1
- 230000036407 pain Effects 0.000 description 1
- 210000000496 pancreas Anatomy 0.000 description 1
- 235000019319 peptone Nutrition 0.000 description 1
- 102000013415 peroxidase activity proteins Human genes 0.000 description 1
- 108040007629 peroxidase activity proteins Proteins 0.000 description 1
- 239000008194 pharmaceutical composition Substances 0.000 description 1
- 239000000049 pigment Substances 0.000 description 1
- 238000007747 plating Methods 0.000 description 1
- 239000004417 polycarbonate Substances 0.000 description 1
- 229920000515 polycarbonate Polymers 0.000 description 1
- 229920002523 polyethylene Glycol 1000 Polymers 0.000 description 1
- 229920001184 polypeptide Polymers 0.000 description 1
- 239000011148 porous material Substances 0.000 description 1
- 230000014773 positive regulation of hemostasis Effects 0.000 description 1
- 238000011533 pre-incubation Methods 0.000 description 1
- 238000002360 preparation method Methods 0.000 description 1
- 230000002265 prevention Effects 0.000 description 1
- 238000012545 processing Methods 0.000 description 1
- 239000011535 reaction buffer Substances 0.000 description 1
- 230000010410 reperfusion Effects 0.000 description 1
- 238000011160 research Methods 0.000 description 1
- 230000000717 retained effect Effects 0.000 description 1
- 238000012552 review Methods 0.000 description 1
- 230000035945 sensitivity Effects 0.000 description 1
- 238000000926 separation method Methods 0.000 description 1
- 238000012163 sequencing technique Methods 0.000 description 1
- 238000013207 serial dilution Methods 0.000 description 1
- 125000003607 serino group Chemical group [H]N([H])[C@]([H])(C(=O)[*])C(O[H])([H])[H] 0.000 description 1
- 230000035939 shock Effects 0.000 description 1
- 239000002356 single layer Substances 0.000 description 1
- 230000009759 skin aging Effects 0.000 description 1
- 239000000600 sorbitol Substances 0.000 description 1
- 210000000278 spinal cord Anatomy 0.000 description 1
- 206010041823 squamous cell carcinoma Diseases 0.000 description 1
- 238000010561 standard procedure Methods 0.000 description 1
- 239000007858 starting material Substances 0.000 description 1
- 230000001954 sterilising effect Effects 0.000 description 1
- 238000004659 sterilization and disinfection Methods 0.000 description 1
- 238000001356 surgical procedure Methods 0.000 description 1
- WROMPOXWARCANT-UHFFFAOYSA-N tfa trifluoroacetic acid Chemical compound OC(=O)C(F)(F)F.OC(=O)C(F)(F)F WROMPOXWARCANT-UHFFFAOYSA-N 0.000 description 1
- 230000009424 thromboembolic effect Effects 0.000 description 1
- 235000013619 trace mineral Nutrition 0.000 description 1
- 239000011573 trace mineral Substances 0.000 description 1
- 238000000844 transformation Methods 0.000 description 1
- 230000008733 trauma Effects 0.000 description 1
- 239000002753 trypsin inhibitor Substances 0.000 description 1
- 230000004614 tumor growth Effects 0.000 description 1
- 238000000108 ultra-filtration Methods 0.000 description 1
- 230000002792 vascular Effects 0.000 description 1
- 210000004509 vascular smooth muscle cell Anatomy 0.000 description 1
- 230000029663 wound healing Effects 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- C07K14/81—Protease inhibitors
- C07K14/8107—Endopeptidase (E.C. 3.4.21-99) inhibitors
- C07K14/811—Serine protease (E.C. 3.4.21) inhibitors
- C07K14/8114—Kunitz type inhibitors
- C07K14/8117—Bovine/basic pancreatic trypsin inhibitor (BPTI, aprotinin)
Definitions
- the present invention relates to aprotinin variants with improved immunological and enzyme-inhibiting properties and their preparation and use.
- Kunitz domains are polypeptides that inhibit a variety of different potency serine proteases. They usually contain three disulfide bridges, which stabilize the protein and determine its three-dimensional structure. The interaction with the respective serine protease occurs mainly via an approximately 9 amino acid residues long loop in the N-terminal region of the
- Kunitz-domain This loop binds to the catalytic center of the protease and thus prevents cleavage of the corresponding protease substrates (Laskowski and Kato [1980], Bode and Huber [1992]).
- Aprotinin also referred to as bovine pancreatic trypsin inhibitor (BPTI) (BPTI; Figure 1: SEQ ID NO: 1), is considered a prototype of the Kunitz domains (Fritz and Wunderer [1983]). It is a basic protein of 58 amino acid residues in length that can be isolated from various bovine organs (including pancreas, lung, liver and heart). Aprotinin is stabilized by three disulfide bridges (Cys 5 - Cys 55, Cys 14 - Cys 38, Cys 30 - Cys 51) and is among others. a potent inhibitor of trypsin, plasmin and plasma kallikrein.
- BPTI bovine pancreatic trypsin inhibitor
- X-ray diffraction analysis of the aprotinin-bovine trypsin complex revealed that the aprotinin contact region to the protease catalytic center is essentially formed by a loop consisting of amino acid residues 11 to 19 (see Bode and Huber [1992] and references therein).
- the amino acid residue Lys 15 which is in particularly close contact with the catalytically active serine residue of the protease.
- the amino acid residue Lys 15 is therefore designated by definition as Pl residue (Schechter and Berger [1967].) N-terminal of Lys-15 are the residues P2, P3, etc., while the amino acid residues are C-terminal of Lys-15 as Pl ', P2', etc. It has previously been shown that the inhibitory effect of aprotinin can be altered by targeted replacement of amino acid residues in the range from residue 11 to residue 19 (Otlewski et al., 2001, Apeler et al [2004], Krowarsch et al. [2005].) The amino acid residues 36-39 are also important for the effectiveness of aprotinin (Fritz and Wunder [1983], Krowarsch et al. [2005]).
- aprotinin is sold under the trade name Trasylol is currently used mainly in cardiac surgery, after clinical studies have shown that treatment with aprotinin significantly reduces the need for transfusion in such operations and reduces rebleeding (Royston [1992]) It is attributed to the inhibition of intrinsic blood coagulation (contact activation), the inhibition of fibrinolysis and the reduction of thrombin formation (Blauhut et al. [1991], Dietrich et al. [1995]). Thus, inhibition of both the plasma and plasma kallikrein is important for the hemostatic effect of aprotinin.
- Kunitz domains within the meaning of this invention are homologs of the aprotinin having 55 to 62 amino acid residues, which usually contain six cysteine residues and three disulfide bridges, each between the positions Cys 5 - Cys 55; Cys 14 - Cys 38 and Cys 30 - Cys 51 (aprotinin numbering) are formed.
- the amino acid residues are numbered according to the 58 amino acid residues of aprotinin as shown in Table 1.
- Some Kunitz domains contain insertions or deletions in addition to the amino acid residues shown in Table 1.
- Kunitz inhibitors have hitherto been found, inter alia, in various vertebrates (eg human, bovine) and in some invertebrates (nudibranch, sea anemone) (Laskowski and Kato [1980] and references therein). Such naturally occurring Kunitz domains are referred to in this application as "natural Kunitz domains.” Examples of natural Kunitz domains include aprotinin, human placental bikunin domain 1, human placental Bikunin domain 2 and human TFPI-I domain 1. The sequences of some natural Kunitz domains are listed in Table 2.
- Non-natural Kunitz domains Various unnatural Kunitz domains have been described in the literature (Dennis et al., 1995, Markland et al., 1996a). , Markland et al [1996b], Apeler et al. [2004], EP 0307592) The sequences of some non-natural Kunitz domains are shown in Table 3.
- Aprotinin is a potent inhibitor of plasmin and plasma kallikrein (Table 4), its clinical effect is attributed to the inhibition of intrinsic blood coagulation (contact activation), the inhibition of fibrinolysis and the reduction of thrombin formation (Blauhut et al., 1991, Dietrich et al., 1995) Formation of antibodies Repeated Trasylol may cause allergic reactions (anaphylactic shock), which may increase the possibility of multiple use of aprotinin restricted (Dietrich et al. [2001], Beierlein et al. [2005]).
- the aim of the present invention is the production of aprotinin variants with an aprotinin comparable or improved efficacy (in terms of enzyme inhibition of plasmin and plasma kallikrein, inhibition of fibrinolysis, inhibition of coagulation and reduction of bleeding time) with less antigenicity and immunogenicity.
- aprotinin surprisingly revealed positions of amino acid residues of aprotinin whose targeted replacement with corresponding amino acid residues of other natural or non-natural Kunitz domains yield aprotinin variants which show an immunologically improved profile. These amino acid residues serve as a starting point for targeted mutagenesis (formation of chimeras, see below).
- amino acid residues of aprotinin Tyr-10, Arg-17, He-19, Ala-40, Lys-41 and Ala-48; Also important in this analysis are the amino acid residues of aprotinin Pro-9, Lys-26, Ala-27, Leu-29, Gln-31, Arg-39, Lys-46 and Asp-50 Considered as immunologically relevant.
- Variants of aprotinin according to the invention are formed by formation of chimeras between aprotinin and other natural or non-natural Kunitz domains.
- the formation of chimeras occurs by replacement of one or more amino acid residues that are considered immunologically relevant.
- amino acid residues in the aprotinin active site become more resistant to the amino acid residues of other natural or non-natural Kunitz domains exchanged to improve the effectiveness.
- Variants of aprotinin according to the invention have the general formula: X 1 X 2 DFCLEPPX 1 OTGPCX 15 X 16 XI 7 XI 8 XI 9 RYFYNAKAGX 29 CQTFVYGGCRX 4 OX 4 IRNNFKSX 48 EDCMRTCGGA
- X n means an amino acid residue of a Kunitz domain according to the numbering shown in Table 1. This amino acid residue can be either aprotinin or another natural or non-natural Kunitz domain listed in Tables 2 and 3. Variants of the invention are produced by exchanging at least one amino acid residue of aprotinin for another amino acid residue of the corresponding natural or unnatural Kunitz domain.
- Preferred variants of aprotinin according to the invention inhibit plasmin with an IC50 ⁇ 30 nM.
- Plasma kallikrein is inhibited by preferred erf ⁇ ndungssiee variants with an IC50 ⁇ 30 nM (see Table 4).
- Preferred variants of aprotinin according to the invention show a lower cross-reactivity to sera of aprotinin-treated patients (reduced antigenicity in a cross-reactivity score 1, see Table 4) and have a reduced immunogenicity in the T-cell epitope profiling (reduced T H epitope number , see Table 5).
- Preferred variants of aprotinin according to the invention exhibit, upon inhibition of fibrinolysis (FIGS.
- aprotinin BPTI-mut2 (Seq No. 3), BPTI-mut5 (Seq No. 6), BPTI-mut10 (Seq No. 11) and BPTI-mutl3 (Seq No. 14) shown in FIG ). Further variants of aprotinin according to the invention are shown in FIG.
- This invention also relates to pharmaceutical compositions containing one or more of the variants of aprotinin according to the invention.
- the described novel aprotinin variants are suitable for the treatment of the following disease states: loss of blood in operations with an increased risk of bleeding; Therapy of thromboembolic conditions (eg after surgery, accidents), shock, polytrauma, sepsis, disseminated intravascular coagulation (DIC), multiple organ failure (MOF), unstable angina, Heart attack, stroke, embolism, deep vein thrombosis, inflammatory diseases (eg rheumatism, asthma), invasive tumor growth and metastasis, pain and edema therapy (cerebral edema, spinal cord edema), prevention of activation of hemostasis in dialysis treatment, treatment of skin aging symptoms (elastosis, atrophy , Wrinkling, vascular changes, pigment changes, actinic keratosis, blackheads, cysts), wound healing, skin cancer, treatment of skin cancer symptoms (actinic keratosis, basal cell carcinoma, squamous cell carcinoma, malignant melanoma
- Oligonucleotides for site directed mutagenesis experiments primers for PCR (polymerase chain reaction) and sequencing reactions were purchased from the company Operon, synthetic genes (optimized for S. cerevisiae coden-usage) from Geneart.
- In vitro mutagenesis was performed using the Quick-change II XL site-directed mutagenesis kit according to the manufacturer (Stratagene).
- kits from Qiagen Hot Star Mastermix
- Stratagene PfuUltra Hotstart DNA Polymerase
- Novagen KOD HiFi, Hot Start and XL DNA Polymerases
- Qiagen was used PCR Purification Kit from Qiagen. All vector constructs and mutagenesis were confirmed by cycle DNA sequencing with fluorescently-labeled terminators (Big Dye Terminator, Version 1.1, Applied Biosystems) on a sequencer (3100 Avant Genetic Analyzer, Applied Biosystem).
- Variants of BPTI bovine pancreatic trypsin inhibitor, aprotinin
- BPTI bovine pancreatic trypsin inhibitor, aprotinin
- BPTI-mutl 3 generated using the Stratagene PCR kit.
- the mutagenesis primer A (down) and primer B (up) were used.
- the mutagenesis primer A had the following sequence: mutagenesis primer A:
- This primer generates the mutations RIA, P2E in BPTI-mut10 (coded by GCT and GAA, in bold) and can also be used to generate mutations R1A, P2E in BPTI-mutl3, the restriction site for BsaBI (GATnnnATC) at 5 '- End of the primer is underlined.
- Primer B :
- the PCR mixture contained approximately 100 ng of plasmid DNA (BPTI-mut2 or BPTI-mut5), 1 OpMoI mutagenesis primer A, 1 OpMoI primer B, ImM dNTPs, IxPCR reaction buffer (Stratagene), 2.5 U PfuUltra hotstart DNA polymerase (Stratagene) in a total volume of 50 ⁇ l.
- the 'cycle' conditions were 3 min. at 94 ° C, 30 cycles of 1 min each. at 94 ° C, 1 min. at 50 ° C., 1 min. at 72 ° C and a subsequent incubation for 5 min. at 72 ° C.
- the PCR mixture was purified with a purification kit (Qiagen), cut with the restriction enzymes BsaBI and Sphl and ligated into the yeast secretion vector pIU10.10W, also cut with BsaBI and Sphl. E.coli DH5 ⁇ cells were transformed with the ligation mixture. From the resulting clones, the successful mutagenesis was verified by DNA sequence analysis and the variants BPTI mutlO and BPTI mutl3 used for further work.
- Yeast cells eg strain JC34.4D (MATD, ura3-52, suc2) were grown in 10 ml YEPD (2% glucose, 2% peptone, 1% Difco yeast extract) and harvested at an ODgQO of 0.6 to 0.8 , The cells were washed with 5 ml of solution A (1 M sorbitol, 3% ethylene glycol; 10 mM bicine pH 8.35), resuspended in 0.2 ml of solution A and stored at -7O 0 C.
- solution A (1 M sorbitol, 3% ethylene glycol; 10 mM bicine pH 8.35
- Plasmid DNA (5 ⁇ g) and carrier DNA (50 ⁇ g of herring sperm DNA) were added to the frozen cells. The cells were then thawed by shaking for 5 min at 37 ° C. After addition of 1, 5 ml of solution B (40% PEG 1000; 200 mM bicine pH 8.35) the cells were incubated for 60 min at 30 0 C, (after pelleting with 1.5 ml of solution C 0.15 M NaCl, 10 mM bicine pH 8.35) and resuspended in 100 ⁇ l of solution C. The plating took place on a selection medium with 2% agar. Were transformants after incubation for 3 days at 3O 0 C obtained Example 3
- the contents of the SL4 solution were dissolved in demineralised water and the pH was adjusted to 3-4 with NaOH.
- the nutrient solution was made up to 1000 ml with demineralized water and stored in aliquots at -20 ° C.
- the starting materials of the nutrient solutions SD2 and SC5 were prepared in demineralized water and the pH was adjusted to pH 5.5. Sterilization was carried out at 121 ° C. for 20 min. Glucose was dissolved in 1/5 of the required volume in demineralized water, sterilized separately and, after cooling, added to the remaining nutrient solution. strain stocks
- yeast transformants were created by mixing 1 ml aliquots of a preculture with 1 ml of 80% glycerol solution and stored at -14O 0 C. Precultivations The preculture fermentations were carried out in 50 ml (for main cultures in small volume) or 1 liter shake flasks (for main cultures in medium volume) filled with 10 or 100 ml SD2 nutrient solution. The inoculation took place with a trunk preserve or with a single colony from an SD2 agar plate. The cultures were incubated with constant shaking (240 rpm) for 2 - 3 days at 28 - 30 0 C. Main culture fermentations
- the main culture fermentations on a small scale were carried out using 1 liter shake flasks filled with 100 ml SC5 nutrient solution.
- the inoculation was usually carried out with 3 ml of the preculture described above.
- the cultures with continuous shaking (240 rev / min) for 4 days at 28 were - incubated 30 0 C.
- the bioreactor system of Wave Biotech (Tageiswangen, CH) was used.
- BPTI-mutl3 Purification of BPTI-mutl3 from the supernatants of fermented yeast cells
- the cell-free supernatants containing BPTI-mutl3 prepared in the main culture fermentation were mixed with IM NaOH until the pH was 7.8. Suspended particulates suspended in the supernatant were sedimented by centrifugation at 2,000 rpm at 4 ° C (15 minutes, Beckman-Allegra 6KR). The supernatant was applied at 1 ml / min to a 10 ml trypsin agarose column (Sigma-T1763).
- BPTI-mutl 3 was eluted with 180 ml of 50 mM KCl / 10 mM HCl pH 2.0. The 2 ml fractions were collected in Collected tubes each containing 500 ul 200 raM Tris pH 7.6, 2 M NaCl to neutralize. Fractions containing BPTI-mutl3 were identified by the trypsin inhibition assay described below.
- Trypsin-inhibiting fractions were pooled and dialysed twice in a dialysis tubing with a 1,000,000 dalton cut-off size (Spectra / POR6) against each 2 liters of 50 mM Tris pH 7.5.
- the dialyzate was concentrated in an Amicon 8200 stirred cell over an ultrafiltration membrane of exclusion size 1, 000 daltons.
- the protein concentration was determined with a Coomassie Plus test (Pierce, 23236) according to the manufacturer's instructions. The measured protein concentration was typically between 0.1 and 6 mg / ml.
- the trypsin-inhibiting fractions were pooled after purification over trypsin agarose, mixed with the same volume of 0.1% TFA and applied to a Source 15 RPC column.
- the column was washed with 6 ml of 0.1% TFA (buffer HPLC-A) and then BPTI-mutl 3 with a 25 ml gradient on 50% buffer HPLC-B (0.1% TFA, 60% acetonitrile) and another 5 ml Gradients to 100% buffer HPLC-B eluted.
- the eluates containing BPTI-mutl3 were lyophilized and the lyophilizate was taken up in 250 ⁇ l of 50 mM Tris pH 7.5 per fraction.
- the purified protein was diluted to 2 pmol / ⁇ l with a 0.1% TFA solution and acidified at the same time. After separation, this sample was analyzed by mass spectrometry using a GromSil 120 ODS-4 HE (3 ⁇ m, 250 ⁇ 0.2 mm). The molecular weights of BPTI mut 13 (6379.1 daltons) were unambiguously demonstrated with a delta of 0.7 daltons on the basis of the multiply charged substance ions obtained.
- the protein after denaturation with guanidinium hydrochloride, reduction with dithiothreitol and derivatization with iodoacetamide, was cleaved by tryptic cleavage.
- the resulting cleavage peptides were also analyzed by mass spectrometry and, based on the proven peptide masses and MS / MS spectra, accurate sequence coverage of the protein was established.
- the inhibitory potency of BPTI-mutl3 against the enzymatic activities of trypsin, plasmin and plasma kallikrein were determined in biochemical assays in white 384-well microtiter plates using fluorogenic substrates.
- the assay buffer was composed of 50 mM Tris / Cl, pH 7.4, 100 mM NaCl, 5 mM CaCl 2 , 0.08% (w / v) BSA.
- the test conditions were as follows:
- BPTI-mutl3 Per 10 ul of a serial dilution of BPTI-mutl3 were placed and pre-incubated with 20 ul of enzyme for 5 min at RT. Subsequently, the reaction was started by addition of 20 .mu.l of substrate. The measurement was carried out after 60-90 min in a Tecan reader at an excitation wavelength of 360 nm and an emission wavelength of 465 nm. Dose-response curves and half-maximal inhibitory constants (IC50 values) were determined using GraphPad Prism software (Version 4.02). determined.
- trasylol aprotinin
- Human citrated plasma was supplemented with 0.13 pM tissue factor (TF) and 164 U / ml tissue plasminogen activator (tPA) as well as BPTI mutl3 or
- BPTI-mutl3 Inhibition of Coagulation by BPTI-mutl3
- trasylol aprotinin
- Human citrated plasma was spiked with 12 mM CaCl 2 to induce coagulation and with BPTI-mutl3 or aprotinin in various concentrations (0.1 ⁇ M to 10 ⁇ M).
- physiological saline was used in place of the Kunitz domains.
- the increase in OD at 405 nm was determined as a measure of coagulation. From this, the half-maximal coagulation time was calculated. An extension of the half-maximal coagulation time means inhibition of coagulation.
- a competitive ELISA was established.
- a commercially available ELISA for the detection of anti-aprotinin antibodies in human serum (CellTrend, Luckenwalde) was modified so that the competition of the variants and aprotinin for binding to anti-aprotinin antibodies could be detected with high sensitivity.
- the anti-aprotinin antibody-containing antisera were from aprotinin-treated patients who had developed a high antibody titre to the protein.
- the antisera in the dilution buffer together with aprotinin or the BPTI variant to be tested were preincubated at room temperature for 1 h with gentle shaking in a total volume of 300 ⁇ l each. This usually came depending on the used Antiserum dilutions of 1: 3000 to 1: 7500 are used.
- Each protein to be tested was tested at three different concentrations (1, 10, 100 nM). An empty control without aprotinin or BPTI variant was felt as a reference. After preincubation, the batch was transferred to a well precoated with aprotinin well of the microtiter modules contained in the test kit.
- each well was washed according to the manufacturer's instructions and then a color reaction was generated with the aid of the peroxidase-coupled secondary antibody supplied.
- the optical density was measured in a Tecan Reader at 450 nm (reference wavelength 620 nm).
- the measured values for each protein concentration tested were set to the reference blank value (100%) in the percentage ratio.
- Variants with cross-reactivities reduced relative to aprotinin to the antisera used were typically> 20% residual ELISA at 100 nM protein (cross-reactivity score: 1).
- aprotinin and variants with similar or increased cross-reactivity were characterized by residual signals of ⁇ 20% at 100 nM protein (cross-reactivity score: 0).
- HLA class II epitopes also referred to as T H epitopes.
- the Epibase® platform analyzes all possible 10 amino acid residue long peptide portions of a target sequence to be tested for binding to 48 HLA class II receptors (allotypes are 20x DRB1, 7x DRB3 / 4/5, 14x DQ and 7x DP).
- the free binding energy is calculated and a dissociation constant (K d ) is determined.
- the respective peptides are classified as strong (S), middle (M) and weak or non (N) binders. The following limits were used: S: strong binders, K d ⁇ 0.1 ⁇ M; M: middle binders, 0.1 ⁇ M ⁇ IQ ⁇ 0.8 ⁇ M; N: weak or not binder, 0.8 ⁇ M ⁇ K d .
- the observed T H cell activation / proliferation is generally interpreted as DRBI specific.
- participation of the DRB3 / 4/5, DQ and DP can not be ruled out. Due to the lower expression rate of these genes compared to DRBl, only strong binders for DRB3 / 4/5, DQ and DP are included in the consideration of the critical epitopes. The critical epitopes are therefore strong binders compared to the DRBl, DRB3 / 4/5, DQ and DP and additionally middle binders against DRBl counted.
- hCAVSMC Human coronary arterial vascular smooth muscle cells
- TEBU vascular smooth muscle cells
- M 231 medium growth medium
- TEBU vascular smooth muscle cells
- the plates are previously coated with vitronectin (50 ng / cm 2) (Gibco / Invitrogen, Düsseldorf, Germany). After the incubation period, one half of the confluent cell monolayer is removed. In the cell-free area of the well about 50% of the vitronectin coating is retained.
- the growth medium is replaced by the test medium MCDB-131 / 0.2% BSA (Molecular Cellular Developmental Biology (MCDB); Basal Medium (BSA)) (Gibco / Invitrogen, Düsseldorf, Germany) and the cells are replaced with 1OnM PDGF-BB (( R & D Systems, Wiesbaden-Nordenstadt, Germany).
- BSA Molecular Cellular Developmental Biology
- BSA Basal Medium
- test substances are then added in the indicated concentrations. After 24 and 48 hours of incubation, the migration distance of the cells into the free corrugation area is determined microscopically. Each measurement point represents an average of four measured regions and at least three independent experiments were performed.
- Neutrophils are isolated from blood by standard methods.
- the chemotaxis of neutrophils is performed in a two chamber system.
- a HUVEC monolayer is cultured for 24 h.
- 1x105 Neutrophils in RPMI 1640 medium, previously loaded with a fluorescent dye, are placed in the upper chamber.
- the lower chamber contains varying concentrations of stimulus or constant stimulus concentration (IL-8: 5nM or C5a: 1OnM) and varying concentrations of the test substance.
- the substances to be investigated are in both chambers.
- the assay is incubated for 45 min at 37 ° C and 5% CO2. After incubation, the cells which have migrated to the lower chamber are determined (fluorescence measurement, counting).
- Amino acid residues 1, 2, 3, 4 may be missing 15 amino acid residues 56, 57, 58 may be missing
- cross reactivity score 0 ⁇ 20% residual signal in ELISA at 100 nM protein
- Cross-reactivity score 1 > 20% residual signal in ELISA at 100 nM protein
- T H epitope number per HLA gene for aprotinin and aprotinin variants Peptides which bind to several HLAs of the same gene (DRB1, DRB3 / 4/5, DQ and DP) are counted once (for definitions, see embodiment)
Landscapes
- Chemical & Material Sciences (AREA)
- Organic Chemistry (AREA)
- Health & Medical Sciences (AREA)
- General Health & Medical Sciences (AREA)
- Biochemistry (AREA)
- Biophysics (AREA)
- Life Sciences & Earth Sciences (AREA)
- Genetics & Genomics (AREA)
- Medicinal Chemistry (AREA)
- Molecular Biology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Gastroenterology & Hepatology (AREA)
- Peptides Or Proteins (AREA)
Abstract
L'objet de la présente invention est la mise au point de variants d'aprotinine ayant une efficacité comparable à celle de l'aprotinine ou améliorée, pour une antigénicité et une immunogénicité réduites. Les propriétés souhaitées sont obtenues par l'échange de restes d'acides aminés dans le centre actif et hors du centre actif contre des restes d'acides aminés correspondants d'autres domaines de Kunitz naturels et non naturels. Une analyse détaillée de l'aprotinine a révélé étonnamment des positions de restes d'acides aminés de l'aprotinine dont l'échange ciblé contre des restes d'acides aminés correspondants d'autres domaines de Kunitz naturels et non naturels donne des variantes d'aprotinine (fig. 1: séq. No 2 à séq. No 6 et séq. No 10 à séq. No 14) qui présentent une réactivité croisée plus faible avec des sérums de patients traités à l'aprotinine (antigénicité réduite) (tableau 4), présentent une immunogénicité réduite (fig. 1: séq. No 10 et séq. No 13) (tableau 5) dans des recherches de profils d'épitopes de lymphocytes T, et possèdent une efficacité comparable à l'aprotinine ou améliorée par rapport à l'inhibition enzymatique de plasmine et de kallikréine plasmatique (tableau 4), à l'inhibition de la fibrinolyse (fig. 3 et fig. 4), à l'inhibition de la coagulation (fig. 5 et fig. 6), à l'inhibition de processus inflammatoires complexes (fig. 7 et fig. 8) et à la réduction de la durée de saignement.
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
EP07005100.8 | 2007-03-13 | ||
EP07005100 | 2007-03-13 |
Publications (1)
Publication Number | Publication Date |
---|---|
WO2008110301A1 true WO2008110301A1 (fr) | 2008-09-18 |
Family
ID=39523815
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
PCT/EP2008/001820 WO2008110301A1 (fr) | 2007-03-13 | 2008-03-07 | Variants d'aprotinine à propriétés améliorées |
Country Status (1)
Country | Link |
---|---|
WO (1) | WO2008110301A1 (fr) |
Cited By (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
DE102011013326A1 (de) | 2011-03-08 | 2012-09-13 | Solution Shop Ag | Neue Fibrinolyse-Inhibitoren und deren mdizinische Verwendung |
Citations (9)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP0132732A2 (fr) * | 1983-07-28 | 1985-02-13 | Bayer Ag | Les homologues d'aprotinine avec d'autres amino-acides en position 15 que la lysine, leur procédé de préparation et leur emploi comme médicaments |
EP0238993A2 (fr) * | 1986-03-26 | 1987-09-30 | Bayer Ag | Homologues d'aprotinine produits par génie génétique |
EP0307592A2 (fr) * | 1987-08-07 | 1989-03-22 | Bayer Ag | Analogues de l'inhibiteur de la trypsine pancréatique bovine, leur production et utilisation |
EP0683229A2 (fr) * | 1994-05-18 | 1995-11-22 | Bayer Ag | Procédé de préparation de l'aprotinine recombinante et de variants recombinants de l'aprotinine avec une séquence N-terminale naturelle |
EP0821007A2 (fr) * | 1996-07-25 | 1998-01-28 | Bayer Ag | Variantes d'aprotinin ayant des propriétés améliorées |
DE19725014A1 (de) * | 1997-06-13 | 1998-12-17 | Bayer Ag | Aprotininvarianten mit verbesserten Eigenschaften und Bikunine von Aprotininvarianten |
WO2006017355A2 (fr) * | 2004-07-13 | 2006-02-16 | Bayer Pharmaceuticals Corporation | Variants d'aprotinine ameliores |
US7078383B2 (en) * | 1988-09-02 | 2006-07-18 | Dyax Corp. | ITI-D1 Kunitz domain mutants as HNE inhibitors |
DE102006060375A1 (de) * | 2006-12-20 | 2007-08-09 | Bayer Healthcare Ag | Aprotininvarianten die mit einem Nicht-Protein-Polymer modifiziert sind |
-
2008
- 2008-03-07 WO PCT/EP2008/001820 patent/WO2008110301A1/fr active Application Filing
Patent Citations (9)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP0132732A2 (fr) * | 1983-07-28 | 1985-02-13 | Bayer Ag | Les homologues d'aprotinine avec d'autres amino-acides en position 15 que la lysine, leur procédé de préparation et leur emploi comme médicaments |
EP0238993A2 (fr) * | 1986-03-26 | 1987-09-30 | Bayer Ag | Homologues d'aprotinine produits par génie génétique |
EP0307592A2 (fr) * | 1987-08-07 | 1989-03-22 | Bayer Ag | Analogues de l'inhibiteur de la trypsine pancréatique bovine, leur production et utilisation |
US7078383B2 (en) * | 1988-09-02 | 2006-07-18 | Dyax Corp. | ITI-D1 Kunitz domain mutants as HNE inhibitors |
EP0683229A2 (fr) * | 1994-05-18 | 1995-11-22 | Bayer Ag | Procédé de préparation de l'aprotinine recombinante et de variants recombinants de l'aprotinine avec une séquence N-terminale naturelle |
EP0821007A2 (fr) * | 1996-07-25 | 1998-01-28 | Bayer Ag | Variantes d'aprotinin ayant des propriétés améliorées |
DE19725014A1 (de) * | 1997-06-13 | 1998-12-17 | Bayer Ag | Aprotininvarianten mit verbesserten Eigenschaften und Bikunine von Aprotininvarianten |
WO2006017355A2 (fr) * | 2004-07-13 | 2006-02-16 | Bayer Pharmaceuticals Corporation | Variants d'aprotinine ameliores |
DE102006060375A1 (de) * | 2006-12-20 | 2007-08-09 | Bayer Healthcare Ag | Aprotininvarianten die mit einem Nicht-Protein-Polymer modifiziert sind |
Non-Patent Citations (2)
Title |
---|
BERNINI ET AL: "NMR studies of BPTI aggregation by using paramagnetic relaxation reagents", BIOCHIMICA ET BIOPHYSICA ACTA (BBA) - PROTEINS & PROTEOMICS, ELSEVIER, vol. 1764, no. 5, 1 May 2006 (2006-05-01), pages 856 - 862, XP005434096, ISSN: 1570-9639 * |
LANDIS R C ET AL: "THE ANTITHROMBOTIC AND ANTIINFLAMMATORY MECHANISMS OF ACTION OF APROTININ", ANNALS OF THORACIC SURGERY, NEW YORK, NY, US, vol. 72, no. 6, 1 December 2001 (2001-12-01), pages 2169 - 2175, XP001113092 * |
Cited By (2)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
DE102011013326A1 (de) | 2011-03-08 | 2012-09-13 | Solution Shop Ag | Neue Fibrinolyse-Inhibitoren und deren mdizinische Verwendung |
WO2012119744A1 (fr) | 2011-03-08 | 2012-09-13 | Solution Shop Ag | Nouveaux inhibiteurs de la fibrinolyse et leur utilisation médicale |
Similar Documents
Publication | Publication Date | Title |
---|---|---|
DE69004966T2 (de) | Antikoagulierendes protein. | |
DE69534656T2 (de) | Gentechnisch manipulierte menschliche kunitz domänen die menschliche neutrophile elastase hemmen | |
DE68914022T2 (de) | Aprotinin-Analoge und Verfahren zu ihrer Herstellung. | |
DE69616770T2 (de) | Thrombin inhibitore mit einer hirudin-ähnlichen sequenz | |
DE69126205T2 (de) | Oxidationsresistente analoga des thrombomodulins | |
DE69311893T2 (de) | Inhibitorvariante der menschlichen protease vom kunitz-typ | |
RU2292351C2 (ru) | Полипептид с биологической активностью ингибитора индуцируемой коллагеном адгезии тромбоцитов, его получение и применение | |
FI94876C (fi) | Menetelmä aprotiniinin valmistamiseksi yhdistelmä-DNA-tekniikalla ja menetelmään soveltuva DNA, ilmentämisplasmidi ja isäntäsolu | |
DE60208343T2 (de) | FUSIONSPROTEINE aus hirudin und proinsulin oder insulin | |
DE60215315T2 (de) | Verwendung von fusionsproteinen, deren n-terminaler teil aus einem hirudinderivat besteht, zur herstellung rekombinanter proteine durch sekretion durch hefen | |
EP0393431A1 (fr) | Homologues de l'inhibiteur de la protéase d'Alzheimer préparés de manière génétique, des souches hôtes et vecteurs d'expression pour leur préparation et leur utilisation comme médicament | |
DE3850878T2 (de) | Elastase-inhibierungspolypeptide und verfahren zur herstellung durch genetische rekombination. | |
EP0821007B1 (fr) | Variant de l'aprotinine ayant des propriétés améliorées | |
DE10108100A1 (de) | Verwendung supersekretierbarer Peptide in Verfahren zu deren Herstellung und paralleler Verbesserung der Exportate eines oder mehrerer anderer Polypeptide von Interesse | |
EP0297362A2 (fr) | Aprotinine humaine dont le reste Lys en 15 est substitué par un autre reste protogène d'amino-acide | |
WO2008110301A1 (fr) | Variants d'aprotinine à propriétés améliorées | |
EP0549915A1 (fr) | Nouveaux isohirudines avec stabilité améliorée | |
EP0677107B1 (fr) | Inhibiteur de thrombine provenant de salive de protostomiens | |
WO1998056916A1 (fr) | Variantes d'aprotinine a proprietes ameliorees et bikunines de variantes d'aprotinine | |
EP0496327A1 (fr) | Polypeptides ayant l'activité de la prourokinase, plasmides codant pour les polypeptides, leur production et utilisation | |
WO2009030464A2 (fr) | Préparation et utilisation de variantes d'inhibiteurs de protéase du type kunitz humains (hktpi) | |
DE102006060375A1 (de) | Aprotininvarianten die mit einem Nicht-Protein-Polymer modifiziert sind | |
CA2375224C (fr) | Variants d'antithrombine humaine | |
DE69034118T2 (de) | Polypeptid mit Calpain-inhibierender Aktivität und Verfahren zur Herstellung davon | |
DE102007056231A1 (de) | Herstellung und Verwendung von Varianten humander Kunitz-Typ Protease-Inhibitoren (hKTPI) |
Legal Events
Date | Code | Title | Description |
---|---|---|---|
121 | Ep: the epo has been informed by wipo that ep was designated in this application |
Ref document number: 08716335 Country of ref document: EP Kind code of ref document: A1 |
|
NENP | Non-entry into the national phase |
Ref country code: DE |
|
122 | Ep: pct application non-entry in european phase |
Ref document number: 08716335 Country of ref document: EP Kind code of ref document: A1 |