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WO2003000904A3 - Identification and characterization of plant genes - Google Patents

Identification and characterization of plant genes Download PDF

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Publication number
WO2003000904A3
WO2003000904A3 PCT/EP2002/006968 EP0206968W WO03000904A3 WO 2003000904 A3 WO2003000904 A3 WO 2003000904A3 EP 0206968 W EP0206968 W EP 0206968W WO 03000904 A3 WO03000904 A3 WO 03000904A3
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WO
WIPO (PCT)
Prior art keywords
characterization
identification
plant genes
development
flower
Prior art date
Application number
PCT/EP2002/006968
Other languages
French (fr)
Other versions
WO2003000904A2 (en
Inventor
Allen Sessions
Steven Briggs
Bret Cooper
Stephen A Goff
Todd Moughamer
Jane Glazebrook
Fumiaki Katagiri
Joel Kreps
Nicolas Provart
Darrell Ricke
Tong Zhu
Original Assignee
Syngenta Participations Ag
Allen Sessions
Steven Briggs
Bret Cooper
Stephen A Goff
Todd Moughamer
Jane Glazebrook
Fumiaki Katagiri
Joel Kreps
Nicolas Provart
Darrell Ricke
Tong Zhu
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Syngenta Participations Ag, Allen Sessions, Steven Briggs, Bret Cooper, Stephen A Goff, Todd Moughamer, Jane Glazebrook, Fumiaki Katagiri, Joel Kreps, Nicolas Provart, Darrell Ricke, Tong Zhu filed Critical Syngenta Participations Ag
Priority to AU2002325266A priority Critical patent/AU2002325266A1/en
Priority to EP02758266A priority patent/EP1409696A2/en
Publication of WO2003000904A2 publication Critical patent/WO2003000904A2/en
Publication of WO2003000904A3 publication Critical patent/WO2003000904A3/en

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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/0004—Oxidoreductases (1.)
    • C12N9/0008—Oxidoreductases (1.) acting on the aldehyde or oxo group of donors (1.2)
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07K—PEPTIDES
    • C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/415—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from plants
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/82—Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
    • C12N15/8241—Phenotypically and genetically modified plants via recombinant DNA technology
    • C12N15/8242—Phenotypically and genetically modified plants via recombinant DNA technology with non-agronomic quality (output) traits, e.g. for industrial processing; Value added, non-agronomic traits
    • C12N15/8243—Phenotypically and genetically modified plants via recombinant DNA technology with non-agronomic quality (output) traits, e.g. for industrial processing; Value added, non-agronomic traits involving biosynthetic or metabolic pathways, i.e. metabolic engineering, e.g. nicotine, caffeine
    • C12N15/8251—Amino acid content, e.g. synthetic storage proteins, altering amino acid biosynthesis
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/82—Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
    • C12N15/8241—Phenotypically and genetically modified plants via recombinant DNA technology
    • C12N15/8261—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield
    • C12N15/8262—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield involving plant development
    • C12N15/827—Flower development or morphology, e.g. flowering promoting factor [FPF]
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/82—Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
    • C12N15/8241—Phenotypically and genetically modified plants via recombinant DNA technology
    • C12N15/8261—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield
    • C12N15/8271—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/82—Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
    • C12N15/8241—Phenotypically and genetically modified plants via recombinant DNA technology
    • C12N15/8261—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield
    • C12N15/8271—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance
    • C12N15/8273—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance for drought, cold, salt resistance
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/6895—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for plants, fungi or algae
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/156—Polymorphic or mutational markers
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/158—Expression markers

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  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Chemical & Material Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Organic Chemistry (AREA)
  • Biotechnology (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Molecular Biology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • Biomedical Technology (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Microbiology (AREA)
  • Physics & Mathematics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Cell Biology (AREA)
  • Plant Pathology (AREA)
  • Analytical Chemistry (AREA)
  • Botany (AREA)
  • Medicinal Chemistry (AREA)
  • Nutrition Science (AREA)
  • Gastroenterology & Hepatology (AREA)
  • Physiology (AREA)
  • Mycology (AREA)
  • Immunology (AREA)
  • Peptides Or Proteins (AREA)
  • Breeding Of Plants And Reproduction By Means Of Culturing (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)

Abstract

The present invention relates to nucleic acid molecules obtainable from the rice genome that encode protein products that are involved in the development and timing of flower formation in plants and which can be used to modulate flower development, architecture and flowering time.
PCT/EP2002/006968 2001-06-22 2002-06-24 Identification and characterization of plant genes WO2003000904A2 (en)

Priority Applications (2)

Application Number Priority Date Filing Date Title
AU2002325266A AU2002325266A1 (en) 2001-06-22 2002-06-24 Identification and characterization of plant genes
EP02758266A EP1409696A2 (en) 2001-06-22 2002-06-24 Identification and characterization of plant genes

Applications Claiming Priority (6)

Application Number Priority Date Filing Date Title
US30011201P 2001-06-22 2001-06-22
US60/300,112 2001-06-22
US32527701P 2001-09-26 2001-09-26
US60/325,277 2001-09-26
US33498401P 2001-11-30 2001-11-30
US60/334,984 2001-11-30

Publications (2)

Publication Number Publication Date
WO2003000904A2 WO2003000904A2 (en) 2003-01-03
WO2003000904A3 true WO2003000904A3 (en) 2003-12-04

Family

ID=27404698

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/EP2002/006968 WO2003000904A2 (en) 2001-06-22 2002-06-24 Identification and characterization of plant genes

Country Status (3)

Country Link
EP (1) EP1409696A2 (en)
AU (1) AU2002325266A1 (en)
WO (1) WO2003000904A2 (en)

Families Citing this family (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7538260B2 (en) 2002-09-05 2009-05-26 Jeroen Demmer Compositions isolated from forage grasses and methods for their use
NZ538532A (en) * 2002-09-05 2008-04-30 Genesis Res & Dev Corp Ltd Polypeptides involved in the regulation of flowering in forage grasses
AU2003902412A0 (en) * 2003-05-16 2003-06-05 Agresearch Limited Flowering inhibition
WO2006026287A2 (en) * 2004-08-25 2006-03-09 The Samuel Roberts Noble Foundation, Inc. Plants with delayed flowering
JP2008052371A (en) 2006-08-22 2008-03-06 Fujitsu Ltd Network system with out-of-band authentication
RU2017129844A (en) 2011-04-11 2019-02-06 Таргетед Гроус, Инк. IDENTIFICATION AND APPLICATION OF MUTANT KRP IN PLANTS
CN104928284A (en) * 2015-06-30 2015-09-23 华南农业大学 Soybean vernalization gene GmVRN1 and colonizing method and application thereof
CN105671054B (en) * 2016-03-03 2019-04-26 中国农业科学院作物科学研究所 Application of rice flowering regulator gene OsWRKY104 in regulating plant photoperiod and flowering time
CN106995853B (en) * 2017-05-16 2020-08-25 浙江海洋大学 Method for screening molecular markers associated with leaf growth of Rhizoma chinensis
CN110205402B (en) * 2019-07-03 2020-07-03 江西省超级水稻研究发展中心(江西省农科院海南水稻育种中心) Identification of early-flowering trait QTL of rice and application of early-flowering trait QTL in rice breeding

Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5861542A (en) * 1994-10-14 1999-01-19 Washington State University Research Foundation Gene controlling floral development and apical dominance in plants
WO2000037488A2 (en) * 1998-12-21 2000-06-29 MAX-PLANCK-Gesellschaft zur Förderung der Wissenschaften e.V. Mads-box genes and uses thereof

Patent Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5861542A (en) * 1994-10-14 1999-01-19 Washington State University Research Foundation Gene controlling floral development and apical dominance in plants
WO2000037488A2 (en) * 1998-12-21 2000-06-29 MAX-PLANCK-Gesellschaft zur Förderung der Wissenschaften e.V. Mads-box genes and uses thereof

Non-Patent Citations (9)

* Cited by examiner, † Cited by third party
Title
CHEN X ET AL: "Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.).", THEORETICAL AND APPLIED GENETICS, vol. 95, no. 4, 1997, pages 553 - 567, XP002249193, ISSN: 0040-5752 *
CHUNG YONG-YOON ET AL: "Characterization of two rice MADS box genes homologous to GLOBOSA.", PLANT SCIENCE (LIMERICK), vol. 109, no. 1, 1995, pages 45 - 56, XP002249202, ISSN: 0168-9452 *
IZAWA T ET AL: "Phytochromes confer the photoperiodic control of flowering in rice (a short-day plant)", PLANT JOURNAL, BLACKWELL SCIENTIFIC PUBLICATIONS, OXFORD, GB, vol. 22, no. 5, June 2000 (2000-06-01), pages 391 - 399, XP002956381, ISSN: 0960-7412 *
JIA HONG-WU ET AL: "Characterization and transcriptional profiles of two rice MADS-box genes.", PLANT SCIENCE (SHANNON), vol. 155, no. 2, 29 June 2000 (2000-06-29), pages 115 - 122, XP002249188, ISSN: 0168-9452 *
KANG H G ET AL: "Isolation and characterization of a rice MADS box gene belonging to the AGL2 gene family", MOLECULES AND CELLS, SEOUL, KR, XP002076363, ISSN: 1016-8478 *
KANG H-G ET AL: "CHARACTERIZATION OF TWO RICE MADS BOX GENES THAT CONTROL FLOWERING TIME", MOLECULES AND CELLS, SEOUL, KR, vol. 7, no. 4, 1997, pages 559 - 566, XP009009585, ISSN: 1016-8478 *
KYOZUKA JUNKO ET AL: "Down-regulation of RFL, the FLO/LFY homolog of rice, accompanied with panicle branch initiation.", PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES, vol. 95, no. 5, 3 March 1998 (1998-03-03), March 3, 1998, pages 1979 - 1982, XP002249192, ISSN: 0027-8424 *
KYOZUKA JUNKO ET AL: "Spatially and temporally regulated expression of rice MADS box genes with similarity to Arabidopsis class A, B and C genes.", PLANT AND CELL PHYSIOLOGY, vol. 41, no. 6, June 2000 (2000-06-01), pages 710 - 718, XP002249187, ISSN: 0032-0781 *
YANO M ET AL: "HD1, A MAJOR PHOTOPERIOD SENTIVITY QUANTITATIVE TRAIT LOCUS IN RICE, IS CLOSELY RELATED TO THE ARABIDOPSIS FLOWERING TIME GENE CONSTANS", PLANT CELL, AMERICAN SOCIETY OF PLANT PHYSIOLOGISTS, ROCKVILLE, MD, US, vol. 12, December 2000 (2000-12-01), pages 2473 - 2483, XP002941717, ISSN: 1040-4651 *

Also Published As

Publication number Publication date
AU2002325266A1 (en) 2003-01-08
WO2003000904A2 (en) 2003-01-03
EP1409696A2 (en) 2004-04-21

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