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WO2000009687A1 - Novel gene and protein gmp30 encoded thereby - Google Patents

Novel gene and protein gmp30 encoded thereby Download PDF

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Publication number
WO2000009687A1
WO2000009687A1 PCT/JP1999/004351 JP9904351W WO0009687A1 WO 2000009687 A1 WO2000009687 A1 WO 2000009687A1 JP 9904351 W JP9904351 W JP 9904351W WO 0009687 A1 WO0009687 A1 WO 0009687A1
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gmp30
sequence
protein
gene
dna
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PCT/JP1999/004351
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French (fr)
Japanese (ja)
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Kiyoshi Takayamna
Makoto Yoshimoto
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Taisho Pharmaceutical Co., Ltd.
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Priority to AU51965/99A priority Critical patent/AU5196599A/en
Publication of WO2000009687A1 publication Critical patent/WO2000009687A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/46Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates
    • C07K14/47Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates from mammals
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P29/00Non-central analgesic, antipyretic or antiinflammatory agents, e.g. antirheumatic agents; Non-steroidal antiinflammatory drugs [NSAID]

Definitions

  • the present invention relates to a novel protein GMP30 derived from monocytes having an inflammation regulating activity, and a gene gmp30 encoding the protein.
  • Monocytes are mononuclear phagocytes derived from hematopoietic stem cells.Infections such as the incorporation of foreign microorganisms and the like into monocyte cells and melting by the action of lysosomes, which are numerous in monocytes. Plays an important role in the defense of the body.
  • monocytes have the property of migrating from the blood through cells of the vascular basement membrane toward cells that are undergoing an inflammatory reaction due to external stimuli, etc., and in the process, monocytes eventually become macrophages. It is known to differentiate. It is also known that monocytes and macrophages are activated by interferon expressed from cells undergoing an inflammatory response. In particular, since the inflammatory response caused by a foreign stimulus is controlled by the action of immune cells such as T cells and B cells, monocytes or macrophages are immune system cells (T cells, B cells, etc.) at the site of inflammation. It is supposed to have the function of controlling inflammation through some interaction with
  • An object of the present invention is to identify such a molecule and use it for the development of a medicine or the like. Disclosure of the invention
  • the present inventors aimed at identifying factors involved in the control of inflammation, and as a result of intensive studies to determine a desired protein from genes highly expressed in human monocytes,
  • the present invention has succeeded in isolating the presence of GMP30 and the gene encoding it, gmp30, and completed the present invention.
  • the present invention relates to (a) a protein consisting of the amino acid sequence of SEQ ID NO: 1, or (b) an amino acid in which one or several amino acids have been deleted, substituted or added in the amino acid sequence of SEQ ID NO: 1.
  • the present invention relates to a protein comprising a sequence and having an inflammation regulating function.
  • the present invention relates to (c) a gene consisting of the DNA of SEQ ID NO: 2, or (d) a protein that hybridizes with the DNA of SEQ ID NO: 2 under stringent conditions and has an inflammatory regulatory function. It concerns the gene consisting of the encoding DNA.
  • GMP 30 of the present invention is a protein having a molecular weight of 30.3 kilodaltons (k d) consisting of a total of 266 amino acid residues as shown in SEQ ID NO: 1.
  • gmp 30 of the present invention is a gene consisting of 801 base pairs (bp) as shown in SEQ ID NO: 2.
  • the gene gmp30 can be isolated from a human monocyte-derived cDNA library as a cDNA fragment containing the gene.
  • the cDNA library used by the present inventors was prepared based on mRNA extracted from healthy male peripheral blood monocytes according to a general method. Similarly, cDNA can be prepared based on mRNA of peripheral blood monocytes.
  • Human monocyte-derived mRNA was converted to type II, and cDNA synthesis was performed using a primer obtained by binding oligo dT to one end of a vector plasmid opened with an appropriate restriction enzyme as a primer, followed by the restriction enzyme MboI. Cleavage with restriction enzyme BamHI. Since this vector was prepared using dam methylase-positive E. coli as a host, the A residue of “GATC”, which is a recognition sequence of MboI, is methylated. Thus, MboI cuts only the newly synthesized cDNA portion.
  • this vector has only one BamHI cleavage site near the end opposite to the end to which the oligo dT was ligated, the enzyme cuts the vector at one position, and C DN synthesized to If the BamHI recognition sequence is present in part A, the site is also cleaved.
  • BamHI and Mbol are composed of the sequence “GATC” and generate the same cohesive end. Plasmids can be closed by cleaving with both enzymes and then reacting with DNA ligase. Using the plasmid thus prepared, Escherichia coli was transformed to construct a 3′-end cDNA library.
  • the library 1 includes a region from the poly A site at the 3 ′ end of each mRNA to the site where the base sequence of GATC first appears in the 5 ′ side thereof.
  • An appropriate number of recombinants are randomly selected from the 3′-end cDNA library, and the entire nucleotide sequence of the cDNA fragment in each recombinant is determined.
  • An organ-specific gene and a highly expressed gene can be identified based on how many cDNA fragments having the specific sequence determined in this manner are confirmed from randomly selected recombinants.
  • the total number of recombinants selected at random is suitably several hundreds to about 1,000, but if necessary, more recombinants may be processed.
  • the present inventors carried out the above method, determined all the nucleotide sequences of the cDNA fragments in the 117 recombinants, and found that the frequency of appearance as cDNA having the same sequence was 5Z11
  • the 74 cDNA fragment was selected as a candidate DNA fragment of a gene highly expressed in human monocytes.
  • the cDNA fragment contains only a part of the 3 'end of the mRNA. Therefore, the present inventors obtained a full-length cDNA based on the nucleotide sequence information of the region (hereinafter, 3 ′ fragment).
  • a human peripheral blood monocyte cDNA library commercially available from Clontech Co., Ltd. was designated as type ⁇ , and an oligonucleotide of an appropriate length having a sequence in the above 3 ′ fragment and a similar sequence having a sequence in a vector were used. Oligonucleotides of each length were synthesized, and PCR was performed using these as primers. As a result, a DNA fragment of about 1. 1 kb could be amplified. At this time, it can also be carried out by using mRNA extracted from human monocytes as type I and using a 5 'RACE kit from Clonetech or Gibco. Furthermore, it also uses the above 3 ′ fragment as a probe to clone the above human peripheral blood monocyte cDNA library by colony hybridization or Screening can also be performed by plaque hybridization.
  • the cDNA fragment amplified by the above method is incorporated into a vector pTBlue Vector (Novagen), and transfected into E. coli to cut out the fragment containing the cDNA from the clone as a circular plasmid to obtain all bases.
  • the sequence was determined, to obtain 2 clones of recombinant DNA independently, by determining the nucleotide sequence of each of c DNA fragment was confirmed sequence.
  • One protein translation region (Open Reading Flame, ORF) was found in this sequence, and this gene was named gmp30, and the protein encoded by the gene was named GMP30.
  • the gene gmp30 can be made into a recombinant gene by a general gene recombination technique using an appropriate host vector system.
  • Suitable vectors include E. coli-derived plasmids (eg, pBR322, pUC118, etc.), and Bacillus subtilis-derived plasmids (eg, pUB110, pC194, etc.) ), Yeast-derived plasmids (eg, PSH19 and others), and animal viruses such as Pacteriophage II retrovirus and vaccinia virus can be used.
  • a translation initiation codon and a translation termination codon can be added using an appropriate synthetic DNA adapter.
  • an appropriate expression promoter is connected upstream of the gene.
  • the promoter to be used may be appropriately selected depending on the host. For example, when the host is Escherichia coli, T7 promoter, 1 ac promoter, trp promoter, ⁇ PL promoter, etc., and when the host is Bacillus, S S0 promoter, etc. If the host is yeast, use 5 promoters, GAP promoter, ADH promoter, etc.If the host is animal cells, use SV40-derived promoter, retrovirus promoter, etc. it can.
  • the gene can also be expressed as a fusion protein with another protein (eg, glutathione S transferase, protein A, etc.).
  • the fused GMP30 expressed in this manner can be excised using an appropriate protease (eg, thrombin and others).
  • Hosts that can be used for expression of the gene gmp30 include Escherichia bacteria. Various strains of certain Escherichia coli, various strains of Bacillus subtilis belonging to the genus Bacillus, various strains of Saccharomvces cerevisiae as yeast, and COS-7 cells and CHO cells as animal cells can be used. As a method for transforming host cells using the above-described recombinant vector, a transformation method generally used for each host cell can be applied.
  • a DNA that hybridizes with the sequence and encodes a protein having an inflammation regulating function is also within the scope of the present invention.
  • the degree of the above-mentioned DNA mutation is within an allowable range as long as it has 90% or more homology with the DNA sequence of the gene gmp30.
  • the degree of hybridization with the gene gmp30 can be determined by using a DIG DNA labeling kit under normal conditions (for example, DIG DNA Labeling kit, Boehringer's Mannheim Cat No. 1175033). Conditions for hybridizing in Easy Hyb solution (Boehringer Mannheim Cat No. 1603558) and washing the membrane in 50 x 0.5 XSSC solution (containing 0.1% [w / v] SDS) ( (1 XSSC is 0.15M NaC 0.015M sodium citrate), and only needs to hybridize to the gene gmp30.
  • a protein encoded by a mutant gene having high homology to the gene gmp30 as described above, which has an inflammation regulating function, is also included in the scope of the present invention.
  • the mutant has an inflammatory regulatory function. If the protein has the following, the mutant is within the scope of the present invention.
  • the side chains of the amino acids that are the constituents of proteins differ in hydrophobicity, charge, size, etc., but do not substantially affect the three-dimensional structure (also called three-dimensional structure) of the entire protein In this sense, some highly conservative relationships are known empirically and by physicochemical measurements.
  • the mutant protein is a mutation due to substitution, insertion, deletion, etc. in the amino acid sequence of the novel protein GMP30 shown in SEQ ID NO: 1, the mutation is a mutation that is highly conserved in the three-dimensional structure of the GMP30 protein. If the mutant protein has a function of regulating inflammation like GMP30, these can be said to be within the scope of the present invention.
  • the degree of mutation is within a range in which homology to the amino acid sequence shown in SEQ ID NO: 1 is 90% or more.
  • GMP30 Since GMP30 has an inflammation regulating function, it is presumed that abnormal expression of the gene gmp30 or abnormal expression of the activity of GMP30 affects the inflammation enhancement and sedation. Therefore, a substance that regulates the expression of the gene or a substance that regulates the function of GMP 30 can be expected as an anti-inflammatory agent, and the gene gmp 30 and the protein GMP 30 are used to search for such a physiologically active substance. Can be used for For example, the effect of a test substance on gene expression can be investigated by coexisting a test substance in the transcriptional expression system of the gene gmp 30 and detecting the expression level of the gene gmp 30 by an appropriate method such as PCR. it can.
  • a 3′-terminal cDNA library was prepared according to the method of Okubo et al. (Okubo et al. 1. Nature Genet., 1992> 2> pl73). From the library, 1174 recombinants were randomly selected, and the nucleotide sequence of the cDNA portion was determined. For sequencing, DNA sequencing (PRISM377, manufactured by ABI) and a reaction kit manufactured by ABI were used.
  • the expression frequency of the gene having the following sequence was 5/117.
  • the cDNA fragment containing sequence-1 was cloned by the following method. First, an oligonucleotide (Sequence No. 2) which is a reverse complementary strand to a part of Sequence No. 11 and an oligonucleotide (Sequence No. 13) having a sequence near the cDNA insertion site of lambda phage cloning vector (A gtll) were prepared. , DNA synthesizer (ABI 380B) was synthesized.
  • Human Monocyte cDNA 1 ibrary manufactured by Clontech Laboratories
  • ⁇ gt11 as a cloning vector
  • oligonucleotides of sequence 12 and 13 were used as primers.
  • the following PCR operation was performed using PCR Kit Ver.2 and PCR Thermal Cycler MP (both from Takara Shuzo).
  • PCR cycle After holding at 94 ° C for 2 minutes, incubate at 98 ° C for 20 seconds, cool to 68 ° C at a rate of 11 ° C / 2 seconds, and heat at 68 ° C for 3 minutes. The holding was further performed 30 times at 72 ° C. for 10 minutes.
  • the DNA fragment amplified in 2) was fractionated by agarose gel electrophoresis (gel concentration 1%). The gel was stained with ethidium bromide and irradiated with ultraviolet light to cut out the gel containing the target band. Extraction and purification of DNA fragments from agarose gels were performed using GENECLEAN II Kit (manufactured by Hi-101).
  • This extracted and purified DNA fragment was used as a base sequence determination vector pT7blue (Novagen). Subcloning). The ligation solution was reacted for 1.5 hours at 16 ° C with the following composition using Evening DNA Ligation Kit Ver.2 (Takara Shuzo).
  • Escherichia coli K12 strain DH5 was transformed. Transformants were treated with ampicillin (Amp) 50 g / ml, 5-Bromo-4-Chloro-3-indolyl- ⁇ -D-galactoside 40 g / m1, 1 sopropy 1-5-D-Thio- G lactopyranoside 100; plated on LB agar medium containing uM, and cultured at 37 ° C. at ⁇ ° C.
  • the nucleotide sequence was determined using DNA Sequencer 1 (PRISM377, manufactured by ABI) and using the Daiyuichi Minator method. Oligonucleotides were synthesized based on the determined base sequences, and the entire base sequences of both strands were determined by the primer-walking method. SEQ ID NO: 3 shows the entire nucleotide sequence of the same DNA of the clone. Since the base sequence contained the upstream region of sequence 12 of sequence 12 and sequence 11, it was confirmed that the desired gene gmp30 was cloned.
  • the cDNA contains an ORF encoding a protein consisting of 266 residues (GMP30) (SEQ ID NO: 3). Since a stop codon appeared in the same reading frame in the upstream region of the methionine residue which is the start codon of the protein, the amino acid sequence of the protein encoded by the cDNA fragment is the only one shown in SEQ ID NO: 3. It was confirmed that there was.
  • Example 2 Expression of the gene gmp 30 in animal cells
  • oligonucleotide having a sequence upstream of the initiation codon of the protein of SEQ ID NO: 3 (SEQ ID NO: 4) and an oligonucleotide (Sequence-5) having a sequence of a part of the reverse complementary strand downstream of the stop codon were synthesized using a DNA synthesizer (380B manufactured by ABI).
  • the PCR cycle consists of holding at 94 ° C for 2 minutes, reacting at 98 ° C for 20 seconds, cooling to 68 ° C — cooling at 1 ° C for 2 seconds, and 3 minutes at 68 ° C. The holding was further performed 30 times at 72 ° C. for 10 minutes.
  • a DNA fragment (about 1.5 kb) was specifically amplified by the above method.
  • the amplified DNA fragment (1.5 kb) is fractionated by agarose gel electrophoresis at a gel concentration of 1%, and the gel is stained with ethidium bromide and irradiated with ultraviolet light to contain the target band. The gel was cut out. Extraction and purification of DNA fragments from agarose gel were performed using GENECLEAN II Kit (Bio101).
  • the extracted and purified DNA fragment was subcloned into an animal cell expression vector pTARGET (promega).
  • the ligation solution was reacted for 1.5 hours at 16 ° C with the following composition using Evening DNA Ligation Kit Ver.2 (Takara Shuzo).
  • Escherichia coli K12 strain DH5 was transformed. Transformants were treated with ampicillin (Amp) 50 g / m 15-Bromo-4-Chloro-3-indolyl- ⁇ -D-galactoside 40 gZm1, Isopropyl-3-D-Thio-Galactopyranoside 100 / iM was plated on an LB agar medium containing and cultured overnight at 37 ° C. The colonies appearing on the above plate were inoculated into 10 ml of LB liquid medium containing 50 g / m1 Amp, cultured at 37 ° C overnight, and the cells were collected by centrifugation.
  • the recombinant DNA was purified using Plasmid Miniprep Kit (manufactured by Qiagen) to obtain pTARGET-gmp30.
  • This recombinant plasmid has a CMV promoter upstream of the inserted fragment, and gmp30 can be expressed by introducing the recombinant plasmid into an appropriate animal cell.
  • a collagen petri dish with a diameter of 60 mm was added to a collagen Petri dish, and HamF- containing 10% fetal bovine serum (Dainippon Pharmaceutical), 50 units of Zml ⁇ nicillin, and 50 gZm of 1 streptomycin. (Gibco, hereinafter referred to as the growth medium) 12 medium was used to culture at 3 7 ° C, 5% C_ ⁇ 2 presence.
  • a LIPOFECTAMINE reagent manufactured by Gibco
  • pTARGET-gmp30 was overlaid on the cells, cultured for 6 hours, then replaced with a growth medium, and cultured for 48 hours. After dispersing the cells with trypsin, the cell suspension was dispensed into a 60 mm-diameter plastic petri dish and cultured for another 24 hours.
  • the medium was replaced with a growth medium containing G418 reagent (manufactured by Gibco, 500 gZmL final concentration), and the growth medium was replaced every three days and cultured for 2 weeks.
  • G418 reagent manufactured by Gibco, 500 gZmL final concentration
  • the colonies of the cells became visible to the naked eye, three colonies were isolated using a stainless steel cup.
  • pTARGET vector Promega alone was introduced into CHO k1 cells in the same manner as above, and a stable transformant was isolated. Released.
  • the reaction product was fractionated by 1% agarose gel electrophoresis, stained with ethidium die, and irradiated with ultraviolet light to check whether the target band was amplified.
  • the band of interest was amplified only in CHO k1 cells into which pTARGET-gmp30 had been introduced, and no amplification could be confirmed in CHO k1 cells into which the control vector had been introduced.
  • monocytes isolated from healthy males were used in a 10% non-mobilized ⁇ fetal serum (Dainippon Pharmaceutical Co., Ltd.) in RM 1640 medium containing 50 units ZmL penicillin and 50 g / mL streptomycin. To achieve a final concentration of 1000 units The cells were further cultured for 24 hours after the addition of the fermenter (IFN- ⁇ ). Monocytes were prepared in a medium without IFN-I as a control.
  • the PCR cycle consists of holding at 94 ° C for 2 minutes, reacting at 98 ° C for 20 seconds, cooling to 68 ° C at a rate of 1 ° C / 2 seconds, holding at 68X for 3 minutes, The holding at 10 ° C. for 10 minutes was repeated 30 times.
  • the reaction product was fractionated by 1% agarose gel electrophoresis, stained with ethidium amide, and irradiated with ultraviolet light to check whether the target band was amplified.

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Abstract

[Object]: To provide a human monocyte-derived novel protein GMP30 having an inflammation regulatory activity and a gene gmp30 encoding the same. [Constitution]: A gene gmp30 encoding a novel protein GMP30 having an inflammation regulatory activity is obtained by cloning a human monocyte-derived cDNA library. Because of having the inflammation regulatory activity, this protein is usable in developing anti-inflammation drugs, etc.

Description

明 細 書  Specification
新規遺伝子及びそれにコードされる蛋白質 G M P 3 0 技術分野  Novel genes and their encoded proteins GMP 30
本発明は、 炎症調節活性を有する単球由来の新規蛋白質 G M P 3 0、 該蛋白質 をコ一ドする遺伝子 g m p 3 0に関するものである。 背景技術  The present invention relates to a novel protein GMP30 derived from monocytes having an inflammation regulating activity, and a gene gmp30 encoding the protein. Background art
単球 (mon o cy t e) は造血幹細胞由来の単核食細胞であり、 外来の微生物等を単 球細胞内に取り込んで、 単球内に多数存在するライソソームの作用により融解す るなど、 感染からの生体防御に重要な役割を果たしている。  Monocytes are mononuclear phagocytes derived from hematopoietic stem cells.Infections such as the incorporation of foreign microorganisms and the like into monocyte cells and melting by the action of lysosomes, which are numerous in monocytes. Plays an important role in the defense of the body.
また、 単球は外来刺激等により炎症反応を起こしている細胞に向かって、 血中 から血管基底膜を貫通して遊走する性質を有し、 その過程で最終的には単球はマ クロファージへと分化していくことが知られている。 また、 炎症反応を起こして いる細胞から発現されるインターフェロンにより、 単球やマクロファージが活性 化されることも知られている。 特に外来刺激による炎症反応は、 T細胞や B細胞 等の免疫系細胞の働きによって制御されていることから、 単球またはマクロファ —ジは、 炎症局所で免疫系細胞 (T細胞、 B細胞等) との何らかの相互作用を介 して炎症を制御する機能を有すると想定される。  In addition, monocytes have the property of migrating from the blood through cells of the vascular basement membrane toward cells that are undergoing an inflammatory reaction due to external stimuli, etc., and in the process, monocytes eventually become macrophages. It is known to differentiate. It is also known that monocytes and macrophages are activated by interferon expressed from cells undergoing an inflammatory response. In particular, since the inflammatory response caused by a foreign stimulus is controlled by the action of immune cells such as T cells and B cells, monocytes or macrophages are immune system cells (T cells, B cells, etc.) at the site of inflammation. It is supposed to have the function of controlling inflammation through some interaction with
しかし、 免疫系細胞との相互作用を介した炎症制御機能に関して、 特に如何な る分子を介して炎症反応を制御しているかは、 未だに未解明な点が多い。 そのた め、 この炎症反応を制御する分子を明らかにすることにより、 かかる生体分子を 直接的に医薬として使用し、 又は間接的に医薬化合物の探索に供することが可能 となると推察される。  However, there are still many unclear points concerning the inflammatory control function through the interaction with immune system cells, and in particular, what kind of molecule controls the inflammatory response. Therefore, it is presumed that elucidation of a molecule that regulates this inflammatory response makes it possible to use such a biomolecule directly as a drug or indirectly search for a drug compound.
本発明は、 この様な分子を同定し、 医薬等または医薬等の開発に利用すること にある。 発明の開示  An object of the present invention is to identify such a molecule and use it for the development of a medicine or the like. Disclosure of the invention
本発明者らは炎症制御に関与する因子の同定を目的とし、 ヒト単球で高発現し ている遺伝子の中から、 所望の蛋白質を把握するべく鋭意研究の結果、 新規蛋白 質 GMP 30の存在と、 それをコードする遺伝子 gmp 30の単離に成功し、 本 発明を完成するに至った。 The present inventors aimed at identifying factors involved in the control of inflammation, and as a result of intensive studies to determine a desired protein from genes highly expressed in human monocytes, The present invention has succeeded in isolating the presence of GMP30 and the gene encoding it, gmp30, and completed the present invention.
即ち、 本発明は、 (a) 配列番号: 1に記載のアミノ酸配列からなる蛋白質、 または (b) 配列番号: 1のアミノ酸配列において 1もしくは数個のアミノ酸が 欠失、 置換もしくは付加されたアミノ酸配列からなり、 かつ炎症調節機能を有す る蛋白質に関するものである。 さらに本発明は、 (c) 配列番号: 2に記載の D N Aからなる遺伝子、 または、 (d) 配列番号: 2の DN Aとストリンジェント な条件でハイプリダイズし、 かつ炎症調節機能を有する蛋白質をコードする DN Aからなる遺伝子に関するものである。  That is, the present invention relates to (a) a protein consisting of the amino acid sequence of SEQ ID NO: 1, or (b) an amino acid in which one or several amino acids have been deleted, substituted or added in the amino acid sequence of SEQ ID NO: 1. The present invention relates to a protein comprising a sequence and having an inflammation regulating function. Furthermore, the present invention relates to (c) a gene consisting of the DNA of SEQ ID NO: 2, or (d) a protein that hybridizes with the DNA of SEQ ID NO: 2 under stringent conditions and has an inflammatory regulatory function. It concerns the gene consisting of the encoding DNA.
本発明である GMP 30は、 配列番号 1に示すように全 266アミノ酸残基か らなる分子量 30. 3キロダルトン (k d) の蛋白質である。  GMP 30 of the present invention is a protein having a molecular weight of 30.3 kilodaltons (k d) consisting of a total of 266 amino acid residues as shown in SEQ ID NO: 1.
また、 もう一つの本発明である gmp 30は、 配列番号 2に示すように 80 1 塩基対 (b p) からなる遺伝子である。  In addition, gmp 30 of the present invention is a gene consisting of 801 base pairs (bp) as shown in SEQ ID NO: 2.
遺伝子 gmp 30は、 ヒト単球由来の c DNAライブラリーから、 該遺伝子を 含んだ c DN A断片として単離することができる。 本発明者らが使用した c DN Aライブラリ一は、 健常男性末梢血単球から一般的な方法に従って抽出した mR N Aを基に調製したものであるが、 クローンテック社から市販されているヒト末 梢血単球の mRN Aを元にしても同様に c DN Aを調製することができる。  The gene gmp30 can be isolated from a human monocyte-derived cDNA library as a cDNA fragment containing the gene. The cDNA library used by the present inventors was prepared based on mRNA extracted from healthy male peripheral blood monocytes according to a general method. Similarly, cDNA can be prepared based on mRNA of peripheral blood monocytes.
ヒト単球で高発現している遺伝子を識別する方法として、 大久保らの方法 (Ok ubo et al. , Nature Genet. , 2, pl 73, 1992) による、 遺伝子の発現頻度を解析す る方法を用いることができる。 具体的には、 以下の手順による。  As a method for identifying genes highly expressed in human monocytes, a method for analyzing gene expression frequency by the method of Okubo et al. (Okubo et al., Nature Genet., 2, pl 73, 1992) was used. Can be used. Specifically, the following procedure is used.
ヒト単球由来の mRNAを铸型とし、 適当な制限酵素で開環させたベクタープ ラスミドの一端にオリゴ d Tを結合させたものをプライマーとして c DNA合成 を行った後、 制限酵素 Mb o Iと制限酵素 B amH Iで切断する。 当該べクタ一 は d amメチラ一ゼ陽性の大腸菌を宿主として調製されたため、 Mb o Iの認識 配列である 「GATC」 の A残基がメチル化されている。 従って Mb o Iは、 新 たに合成された c DNA部分のみを切断する。 当該ベクターは、 オリゴ dTを結 合させた末端とは反対側の末端近傍に B amH I切断部位を 1ケ所だけ有してい るので、 本酵素は当該べクタ一を 1ケ所切断し、 さらに新たに合成された c DN A部分にもし B amH I認識配列が存在すれば、 その部位も切断する。 B amH I と Mb o lは 「GATC」 なる配列からなる、 同一の付着端を生ぜしめるため、 両酵素で切断した後、 DNAリガーゼを作用させれば、 プラスミ ドを閉環するこ とができる。 このようにして調製したプラスミ ドを用いて、 大腸菌を形質転換す ることで 3 ' 末端 c DNAライブラリーを構築した。 従って当該ライブラリ一は、 各 mRNAの 3 ' 端のポリ A部位から、 その 5 ' 側部分のうち最初に G A T Cな る塩基配列が出現する部位までの領域を含んでいる。 当該 3 ' 末端 c DNAライ ブラリ一から無作為に適当個数の組換え体を選択し、 各組換え体中の c DN A断 片の全塩基配列を決定する。 このようにして決定された特定配列を有する c DN A断片が、 無作為に選択された組み換え体の中から幾つ確認されるかをもって、 臓器特異的遺伝子及び高発現遺伝子を識別することができる。 Human monocyte-derived mRNA was converted to type II, and cDNA synthesis was performed using a primer obtained by binding oligo dT to one end of a vector plasmid opened with an appropriate restriction enzyme as a primer, followed by the restriction enzyme MboI. Cleavage with restriction enzyme BamHI. Since this vector was prepared using dam methylase-positive E. coli as a host, the A residue of “GATC”, which is a recognition sequence of MboI, is methylated. Thus, MboI cuts only the newly synthesized cDNA portion. Since this vector has only one BamHI cleavage site near the end opposite to the end to which the oligo dT was ligated, the enzyme cuts the vector at one position, and C DN synthesized to If the BamHI recognition sequence is present in part A, the site is also cleaved. BamHI and Mbol are composed of the sequence “GATC” and generate the same cohesive end. Plasmids can be closed by cleaving with both enzymes and then reacting with DNA ligase. Using the plasmid thus prepared, Escherichia coli was transformed to construct a 3′-end cDNA library. Therefore, the library 1 includes a region from the poly A site at the 3 ′ end of each mRNA to the site where the base sequence of GATC first appears in the 5 ′ side thereof. An appropriate number of recombinants are randomly selected from the 3′-end cDNA library, and the entire nucleotide sequence of the cDNA fragment in each recombinant is determined. An organ-specific gene and a highly expressed gene can be identified based on how many cDNA fragments having the specific sequence determined in this manner are confirmed from randomly selected recombinants.
上記の高発現遺伝子を識別する方法では、 無作為に選択する組み換え体の総数 は数百から千程度が適当であるが、 必要ならばそれ以上の個数の組み換え体を処 理すればよい。  In the above-mentioned method for identifying a highly expressed gene, the total number of recombinants selected at random is suitably several hundreds to about 1,000, but if necessary, more recombinants may be processed.
本発明者らは上記方法を実施し、 1 1 74個の組み換え体中の c DN A断片の 塩基配列を全て決定し、 その中から、 同一の配列を有する c DNAとしての出現 頻度が 5Z1 1 74であった c DN A断片を、 ヒト単球で高発現している遺伝子 の DN A断片の候補として選別した。  The present inventors carried out the above method, determined all the nucleotide sequences of the cDNA fragments in the 117 recombinants, and found that the frequency of appearance as cDNA having the same sequence was 5Z11 The 74 cDNA fragment was selected as a candidate DNA fragment of a gene highly expressed in human monocytes.
上記 c DNA断片は前述したとおり、 mRNAの 3 ' 端の一部の領域しか含ん でいない。 そこで本発明者らは当該領域 (以下 3 ' 断片) の塩基配列情報を元に して、 全鎖長 c DNAを取得した。  As described above, the cDNA fragment contains only a part of the 3 'end of the mRNA. Therefore, the present inventors obtained a full-length cDNA based on the nucleotide sequence information of the region (hereinafter, 3 ′ fragment).
クローンテック社から市販されているヒト末梢血単球 c DN Aライブラリーを 銬型とし、 上記 3 ' 断片内の配列を有する適当な長さのオリゴヌクレオチドとべ クタ一中の配列を有する同程度の長さのオリゴヌクレオチドをそれぞれ合成し、 これらをプライマ一として P CRを行った。 その結果、 約 1. l k bの DNA断 片を増幅することができた。 この際、 ヒト単球から抽出した mRNAを铸型とし、 クローンテック社またはギブコ社の 5 ' RACEキッ トを用いることによつても 行うことができる。 さらにこれはまた、 上記 3 ' 断片をプローブとして、 上記ヒ ト末梢血単球 c DNAライブラリーを、 コロニ一ハイブリダィゼーションまたは プラークハイブリダイゼ一ションで、 スクリ一ニングすることによつても行うこ とができる。 A human peripheral blood monocyte cDNA library commercially available from Clontech Co., Ltd. was designated as type 、, and an oligonucleotide of an appropriate length having a sequence in the above 3 ′ fragment and a similar sequence having a sequence in a vector were used. Oligonucleotides of each length were synthesized, and PCR was performed using these as primers. As a result, a DNA fragment of about 1. 1 kb could be amplified. At this time, it can also be carried out by using mRNA extracted from human monocytes as type I and using a 5 'RACE kit from Clonetech or Gibco. Furthermore, it also uses the above 3 ′ fragment as a probe to clone the above human peripheral blood monocyte cDNA library by colony hybridization or Screening can also be performed by plaque hybridization.
上記方法によって増幅した c DN A断片は、 ベクタ一 pTBlue Vector (Novagen 社) に組み込み、 大腸菌にトランスフエクトすることにより、 該クローンから当 該 c DN Aを含む断片を環状プラスミ ドとして切り出して全塩基配列を決定した c この際、 組換え DNAを独立に 2クローン取得して、 それぞれの c DNA断片 の塩基配列を決定することにより、 配列の確認を行った。 この配列中に一つの蛋 白質翻訳領域 (Open Reading Flame、 OR F) を見いだし、 この遺伝子を gmp 30、 該遺伝子にコードされる蛋白質を GMP 30と命名した。 The cDNA fragment amplified by the above method is incorporated into a vector pTBlue Vector (Novagen), and transfected into E. coli to cut out the fragment containing the cDNA from the clone as a circular plasmid to obtain all bases. At this time c, the sequence was determined, to obtain 2 clones of recombinant DNA independently, by determining the nucleotide sequence of each of c DNA fragment was confirmed sequence. One protein translation region (Open Reading Flame, ORF) was found in this sequence, and this gene was named gmp30, and the protein encoded by the gene was named GMP30.
遺伝子 gmp 3 0は、 適当な宿主ベクター系による一般的な遺伝子組み換え技 術によって、 組み換え遺伝子とすることができる。 適当なベクターとしては、 大 腸菌由来のプラスミ ド (例、 p B R 3 2 2、 p UC 1 1 8その他) 、 枯草菌由来 のプラスミ ド (例、 p UB 1 1 0、 p C 1 94その他) 、 酵母由来のプラスミ ド (例、 P SH 1 9その他) 、 さらにパクテリオファージゃレトロウイルスやワク シニアウィルス等の動物ウィルス等が利用できる。 組み換えに際しては、 適当な 合成 DNAアダプターを用いて翻訳開始コドンや翻訳終止コドンを付加すること も可能である。 さらに該遺伝子を発現させるために、 遺伝子の上流に適当な発現 プロモータ一を接続する。 使用するプロモーターは、 宿主に応じて適宜選択すれ ばよい。 例えば、 宿主が大腸菌である場合には、 T 7プロモータ一、 1 a cプロ モータ一、 t r pプロモーター、 λ P Lプロモー夕一などが、 宿主がバチルス属 菌である場合には S Ρ 0系プロモータ一等が、 宿主が酵母である場合には ΡΗΟ 5プロモータ一、 GAPプロモーター、 ADHプロモ一夕一等が、 宿主が動物細 胞である場合には S V 40由来プロモータ一、 レトロウィルスプロモーター等が、 それぞれ使用できる。  The gene gmp30 can be made into a recombinant gene by a general gene recombination technique using an appropriate host vector system. Suitable vectors include E. coli-derived plasmids (eg, pBR322, pUC118, etc.), and Bacillus subtilis-derived plasmids (eg, pUB110, pC194, etc.) ), Yeast-derived plasmids (eg, PSH19 and others), and animal viruses such as Pacteriophage II retrovirus and vaccinia virus can be used. Upon recombination, a translation initiation codon and a translation termination codon can be added using an appropriate synthetic DNA adapter. In order to further express the gene, an appropriate expression promoter is connected upstream of the gene. The promoter to be used may be appropriately selected depending on the host. For example, when the host is Escherichia coli, T7 promoter, 1 ac promoter, trp promoter, λPL promoter, etc., and when the host is Bacillus, S S0 promoter, etc. If the host is yeast, use 5 promoters, GAP promoter, ADH promoter, etc.If the host is animal cells, use SV40-derived promoter, retrovirus promoter, etc. it can.
また該遺伝子を他の蛋白質 (例、 グルタチオン S トランスフェラーゼ、 プロテ イン Aその他) との融合蛋白質として発現させることも可能である。 このように して発現させた融合型 GMP 3 0は、 適当なプロテアーゼ (例、 トロンビンその 他) を用いて切り出すことが可能である。  The gene can also be expressed as a fusion protein with another protein (eg, glutathione S transferase, protein A, etc.). The fused GMP30 expressed in this manner can be excised using an appropriate protease (eg, thrombin and others).
遺伝子 gmp 3 0の発現の際に利用できる宿主としては、 ェシエリヒア属菌で ある Escherichia coliの各種菌株、 バチルス属菌である Baci 1 lus subtilisの各 種菌株、 酵母としては Saccharomvces cerevi s i aeの各種菌株、 動物細胞としては COS— 7細胞、 CHO細胞等が利用できる。 上記組み換えべクタ一を用いて宿 主細胞を形質転換する方法としては、 各宿主細胞に対して一般に用いられる形質 転換方法が適用できる。 Hosts that can be used for expression of the gene gmp30 include Escherichia bacteria. Various strains of certain Escherichia coli, various strains of Bacillus subtilis belonging to the genus Bacillus, various strains of Saccharomvces cerevisiae as yeast, and COS-7 cells and CHO cells as animal cells can be used. As a method for transforming host cells using the above-described recombinant vector, a transformation method generally used for each host cell can be applied.
尚、 本発明においては、 配列番号 2に示した塩基配列の他に、 該配列とハイブ リダイズしかつ炎症調節機能を有する蛋白質をコードする DNAも、 本発明の範 囲内である。  In the present invention, in addition to the nucleotide sequence shown in SEQ ID NO: 2, a DNA that hybridizes with the sequence and encodes a protein having an inflammation regulating function is also within the scope of the present invention.
すなわち、 遺伝子 gmp 30の全長配列において、 種々の人為的処理、 例えば 部位特異的変異導入、 変異剤処理によるランダム変異、 制限酵素切断による DN A断片の変異 ·欠失 ·連結等により、 部分的に DN A配列が変化したものであつ ても、 これら DN A変異体が遺伝子 gmp 3 0とストリンジェン卜な条件下でハ イブリダィズし、 かつ炎症調節機能を有する蛋白質をコードする DNAであれば、 配列番号 2に示した DN A配列との相違に関わらず、 本発明の範囲内のものであ る。  That is, in the full-length sequence of the gene gmp30, various artificial treatments, such as site-directed mutagenesis, random mutation by treatment with a mutagen, and mutation, deletion, and ligation of DNA fragments by restriction enzyme digestion, partially Even if the DNA sequence is altered, if the DNA mutant hybridizes with the gene gmp30 under stringent conditions and is a DNA encoding a protein having an inflammatory regulatory function, the sequence may be changed. Despite differences from the DNA sequence shown in No. 2, they are within the scope of the present invention.
上記の DN A変異の程度は、 遺伝子 gmp 3 0の DNA配列と 9 0 %以上の相 同性を有するものであれば許容範囲内である。 また、 遺伝子 gmp 3 0とハイブ リダィズする程度としては、 通常の条件下 (例えば DIG DNA Labeling kit, ベー リンガー 'マンハイム社製 Cat No.1175033) でプローブをラベルした場合に、 3 2°Cの DIG Easy Hyb溶液 (ベーリンガー ·マンハイム社製 Cat No.1603558) 中で ハイブリダィズさせ、 5 0 の0. 5 X S S C溶液 (0. 1 % [w/v] SD S を含む) 中でメンブレンを洗浄する条件 ( 1 X S S Cは 0. 1 5M N a C 0. 0 1 5 M クェン酸ナトリウムである) でのサザンハイブリダィゼーシヨン で、 遺伝子 gmp 3 0にハイプリダイズする程度であればよい。  The degree of the above-mentioned DNA mutation is within an allowable range as long as it has 90% or more homology with the DNA sequence of the gene gmp30. In addition, the degree of hybridization with the gene gmp30 can be determined by using a DIG DNA labeling kit under normal conditions (for example, DIG DNA Labeling kit, Boehringer's Mannheim Cat No. 1175033). Conditions for hybridizing in Easy Hyb solution (Boehringer Mannheim Cat No. 1603558) and washing the membrane in 50 x 0.5 XSSC solution (containing 0.1% [w / v] SDS) ( (1 XSSC is 0.15M NaC 0.015M sodium citrate), and only needs to hybridize to the gene gmp30.
また、 上記のごとく遺伝子 gmp 3 0と相同性の高い変異体遺伝子にコードさ れる蛋白質であって、 炎症調節機能を有する蛋白質もまた、 本発明の範囲内のも のである。  In addition, a protein encoded by a mutant gene having high homology to the gene gmp30 as described above, which has an inflammation regulating function, is also included in the scope of the present invention.
すなわち、 新規蛋白質 GMP 3 0のアミノ酸配列の 1もしくは複数個のァミノ 酸が欠失、 置換もしくは付加された変異体であっても、 該変異体が炎症調節機能 を有する蛋白質であれば、 該変異体は本発明の範囲内のものである。 That is, even if a mutant in which one or more amino acids of the amino acid sequence of the novel protein GMP30 is deleted, substituted or added, the mutant has an inflammatory regulatory function. If the protein has the following, the mutant is within the scope of the present invention.
蛋白質の構成要素となるアミノ酸の側鎖は、 疎水性、 電荷、 大きさなどにおい てそれぞれ異なるものであるが、 実質的に蛋白質全体の 3次元構造 (立体構造と も言う) に影響を与えないという意味で保存性の高い幾つかの関係が、 経験的に また物理化学的な実測により知られている。 例えば、 アミノ酸残基の置換につい ては、 グリシン (G 1 y) とプロリン (P r o) 、 G 1 yとァラニン (A l a) またはバリン (V a 1 ) 、 ロイシン (L e u) とイソロイシン ( I 1 e ) 、 ダル 夕ミン酸 (G 1 u) とグルタミン (G i n) 、 ァスパラギン酸 (A s p) とァス パラギン (A s n) 、 システィン (Cy s) とスレオニン (Th r) 、 Th rと セリン (S e r ) または A 1 a、 リジン (L y s ) とアルギニン (A r g) 、 等 が挙げられる。  The side chains of the amino acids that are the constituents of proteins differ in hydrophobicity, charge, size, etc., but do not substantially affect the three-dimensional structure (also called three-dimensional structure) of the entire protein In this sense, some highly conservative relationships are known empirically and by physicochemical measurements. For example, for substitution of amino acid residues, glycine (G1y) and proline (Pro), G1y and alanine (Ala) or valine (Va1), leucine (Leu) and isoleucine (I 1e), dal permic acid (G1u) and glutamine (Gin), aspartic acid (Asp) and asparagine (Asn), cysteine (Cys) and threonine (Thr), Thr Serine (Ser) or A1a; lysine (Lys) and arginine (Arg);
従って、 配列番号 1に示した新規蛋白質 GMP 30のアミノ酸配列上の置換、 挿入、 欠失等による変異蛋白質であっても、 その変異が GMP 30蛋白質の 3次 元構造において保存性が高い変異であって、 その変異蛋白質が GMP 30と同様 に炎症調節機能を有する蛋白質であれば、 これらは本発明の範囲内にあるものと 言うことができる。 変異の程度としては、 配列番号 1に示したアミノ酸配列との 相同性が、 90 %以上のものが許容し得る範囲である。 産業上の利用可能性  Therefore, even if the mutant protein is a mutation due to substitution, insertion, deletion, etc. in the amino acid sequence of the novel protein GMP30 shown in SEQ ID NO: 1, the mutation is a mutation that is highly conserved in the three-dimensional structure of the GMP30 protein. If the mutant protein has a function of regulating inflammation like GMP30, these can be said to be within the scope of the present invention. The degree of mutation is within a range in which homology to the amino acid sequence shown in SEQ ID NO: 1 is 90% or more. Industrial applicability
GMP 30が炎症調節機能を有していることから、 遺伝子 gmp 30の発現異 常や GMP 30の活性発現異常は、 炎症の亢進や鎮静に影響を与えるものと推測 される。 そのため、 当該遺伝子の発現を調節する物質や GMP 30の機能を調節 する物質は、 抗炎症剤として期待され得るものであり、 遺伝子 gmp 30や蛋白 質 GMP 30は、 この様な生理活性物質の探索に利用することができる。 例えば、 遺伝子 gmp 30の転写発現系中に被験物質を同時に存在させ、 遺伝子 gmp 3 0の発現量を P C R等の適当な方法で検出することにより、 被験物質の遺伝子発 現に与える影響を調べることができる。 発明を実施するための最良の形態 以下実施例を挙げて本発明を詳述する。 尚、 以下特に断らない限り、 実施例で 示す各種実験方法、 例えば組み換え体 c DN Aの抽出や c DN Aの塩基配列の決 定等は、 いずれも当業者にとって自体公知の各種方法 (Molecular Cloning, 2nd. ed. , ColdSpring Harbor Lab. Press, 1989、 その他当業者にとって標準的な方法を 紹介した技術解説書等に記載の方法) により行った。 Since GMP30 has an inflammation regulating function, it is presumed that abnormal expression of the gene gmp30 or abnormal expression of the activity of GMP30 affects the inflammation enhancement and sedation. Therefore, a substance that regulates the expression of the gene or a substance that regulates the function of GMP 30 can be expected as an anti-inflammatory agent, and the gene gmp 30 and the protein GMP 30 are used to search for such a physiologically active substance. Can be used for For example, the effect of a test substance on gene expression can be investigated by coexisting a test substance in the transcriptional expression system of the gene gmp 30 and detecting the expression level of the gene gmp 30 by an appropriate method such as PCR. it can. BEST MODE FOR CARRYING OUT THE INVENTION Hereinafter, the present invention will be described in detail with reference to examples. Unless otherwise specified below, various experimental methods shown in the Examples, such as extraction of recombinant cDNA and determination of the nucleotide sequence of cDNA, are all methods known to those skilled in the art (Molecular Cloning , 2nd. Ed., ColdSpring Harbor Lab. Press, 1989, and other methods described in technical manuals that introduce standard methods for those skilled in the art.
実施例 1. 遺伝子 gmp 3 0のクローニング Example 1. Cloning of gene gmp30
1) 遺伝子の部分配列の決定  1) Determination of partial sequence of gene
ヒト男性健常単球由来の mRNAを錡型として、 大久保らの方法 (Okubo et a 1. Nature Genet. , 1992> 2> pl73) に従い、 3 ' 末端 c D N Aライブラリ一を作成し た。 当該ライブラリーから無作為に 1 1 74個の組換え体を選択し、 c DNA部 分の塩基配列を決定した。 配列決定には DN Aシークェンサ一 (ABI社製 PRISM37 7) と同社製反応キットを用いた。  Using a human male healthy monocyte-derived mRNA as type I, a 3′-terminal cDNA library was prepared according to the method of Okubo et al. (Okubo et al. 1. Nature Genet., 1992> 2> pl73). From the library, 1174 recombinants were randomly selected, and the nucleotide sequence of the cDNA portion was determined. For sequencing, DNA sequencing (PRISM377, manufactured by ABI) and a reaction kit manufactured by ABI were used.
1 1 74個の組み換え体中の各 DNA断片の発現頻度を解析した結果、 下記の 配列 (配列一 1 ) を有する遺伝子の発現頻度が 5/ 1 1 74であった。  As a result of analyzing the expression frequency of each DNA fragment in the 117 recombinants, the expression frequency of the gene having the following sequence (sequence 11) was 5/117.
配列一 1 Array 1
Figure imgf000009_0001
Figure imgf000009_0001
AGAAGACGGATTATCTAGAGAATAATCATATATATGCATACGTAAAAAT 3 '  AGAAGACGGATTATCTAGAGAATAATCATATATATGCATACGTAAAAAT 3 '
2) 配列一 1 を含む c DNA断片のクロ一ニング 2) Cloning of cDNA fragment containing sequence 11
配列— 1を含む c DNA断片のクローニングを以下の方法により行った。 まず, 配列一 1の一部分と逆相補鎖となるオリゴヌクレオチド (配列一 2) 、 ならびに ラムダファージクロ一ニングベクタ一 (A g t l l ) の c DNA挿入部位近傍の 配列を有するオリゴヌクレオチド (配列一 3) を、 DNA合成機 (ABI社製 380B) で合成した。 The cDNA fragment containing sequence-1 was cloned by the following method. First, an oligonucleotide (Sequence No. 2) which is a reverse complementary strand to a part of Sequence No. 11 and an oligonucleotide (Sequence No. 13) having a sequence near the cDNA insertion site of lambda phage cloning vector (A gtll) were prepared. , DNA synthesizer (ABI 380B) Was synthesized.
配列一 2 Sequence 1 2
5' -GAAAAGATAGTAAAGCCCTGTTTGC-3'  5 '-GAAAAGATAGTAAAGCCCTGTTTGC-3'
配列一 3 Sequence 1 3
5' - GCTGAATATCGACGGTTTCCATATGG - 3'  5 '-GCTGAATATCGACGGTTTCCATATGG-3'
λ g t 1 1をクローニングベクターとする、 Human Monocyte c DNA 1 ibrary (クロンテツクラボラトリーズ社製)を铸型とし、 配列一 2のオリゴヌクレオチド と配列一 3のオリゴヌクレオチドをプライマ一とし、 さらに夕カラ LA PCR Kit V er.2と P CRサ一マルサイクラ一 MP (いずれも宝酒造製) を用いて、 以下の P C R操作を行った。  Human Monocyte cDNA 1 ibrary (manufactured by Clontech Laboratories) using λ gt11 as a cloning vector was type 、, and oligonucleotides of sequence 12 and 13 were used as primers. The following PCR operation was performed using PCR Kit Ver.2 and PCR Thermal Cycler MP (both from Takara Shuzo).
cDNA library(≥108pfu/ml) 5 1 cDNA library (≥10 8 pfu / ml) 5 1
10XPCRバッファ一(25mM Mg++を含む) 5 1 10X PCR buffer (including 25mM Mg ++ ) 5 1
2.5mM dNTP 1 1  2.5mM dNTP 1 1
IOMM 配列— 2 2 1  IOMM array—2 2 1
10 /M 配列一 3 In 1  10 / M sequence 1 3 In 1
 water
LA Tag*0リメラ-セ' 0.5 1 LA Tag * 0 Limera-Se '0.5 1
総量 50 1  Total 50 1
P C Rサイクルは、 9 4 °Cで 2分保持後、 9 8 °Cで 2 0秒間反応させ、 6 8 °C まで一 1 °C/ 2秒の速度で冷却し、 6 8 °Cで 3分保持し、 更に 7 2 °Cで 1 0分間 保持を 3 0回繰り返して行った。  PCR cycle: After holding at 94 ° C for 2 minutes, incubate at 98 ° C for 20 seconds, cool to 68 ° C at a rate of 11 ° C / 2 seconds, and heat at 68 ° C for 3 minutes. The holding was further performed 30 times at 72 ° C. for 10 minutes.
上記方法により、 配列一 1を有する DNA断片 (約 1. 5 k b) を特異的に増 幅させた。  By the above method, a DNA fragment having the sequence 11 (about 1.5 kb) was specifically amplified.
3) 塩基配列決定用ベクターへのサブクローニング  3) Subcloning into nucleotide sequence determination vector
2) で増幅した DNA断片を、 ァガロースゲル電気泳動 (ゲル濃度 1 %) で分 画した。 ゲルをェチジゥムブロマイ ドで染色した後、 紫外光照射して目的とする バンドを含むゲルを切り出した。 ァガロースゲルからの DNA断片の抽出と精製 は、 GENECLEAN II Kit ひ イォ 1 0 1社製) を用いて行った。  The DNA fragment amplified in 2) was fractionated by agarose gel electrophoresis (gel concentration 1%). The gel was stained with ethidium bromide and irradiated with ultraviolet light to cut out the gel containing the target band. Extraction and purification of DNA fragments from agarose gels were performed using GENECLEAN II Kit (manufactured by Hi-101).
この抽出精製した DN A断片を、 塩基配列決定用べクタ一 pT7blue (Novagen社 製) にサブクロ一ニングした。 Ligation溶液は夕カラ DNA Ligation Kit Ver.2 (宝酒造製) を用い、 以下の組成で 1 6°Cで 1. 5時間反応させた。 This extracted and purified DNA fragment was used as a base sequence determination vector pT7blue (Novagen). Subcloning). The ligation solution was reacted for 1.5 hours at 16 ° C with the following composition using Evening DNA Ligation Kit Ver.2 (Takara Shuzo).
抽出精製した DN A断片 1^ 1 (50ng)  Extracted and purified DNA fragment 1 ^ 1 (50ng)
pT7blue 1 1 (10ng)  pT7blue 1 1 (10ng)
水 3 1  Water 3 1
Ligat ion溶液 5 I  Ligat ion solution 5 I
総量 IO  Total IO
上記反応後の溶液を用いて、 大腸菌 K 1 2株 DH 5の形質転換を行った。 形質 転換体をアンピシリン (Amp) 5 0 g/m l、 5-Bromo-4-Chloro-3-indolyl - β - D - galac t os ide 40 g /m 1、 1 sopropy 1- 5 -D-Thio-G lactopyranos ide 1 00; uMを含有する L B寒天培地にプレーティングし、 3 7°Cでー晚培養した。 上記プレートに出現したコロニーを 50 g/m 1の Ampを含む L B液体培 地 1 0m l に接種して 3 7 °Cで一晩培養し、 遠心分離によって菌体を集めた後、 QIAprep Spin Plasmid Miniprep Kit (キアゲン社製) で組換え D N Aを精製した < 4) DNA断片の塩基配列の決定  Using the solution after the above reaction, Escherichia coli K12 strain DH5 was transformed. Transformants were treated with ampicillin (Amp) 50 g / ml, 5-Bromo-4-Chloro-3-indolyl-β-D-galactoside 40 g / m1, 1 sopropy 1-5-D-Thio- G lactopyranoside 100; plated on LB agar medium containing uM, and cultured at 37 ° C. at 晚 ° C. The colonies that appeared on the above plate were inoculated into 10 ml of LB liquid medium containing 50 g / m1 Amp, cultured at 37 ° C overnight, and the cells were collected by centrifugation.Then, QIAprep Spin Plasmid Recombinant DNA purified using Miniprep Kit (Qiagen) <4) Determination of base sequence of DNA fragment
塩基配列決定には DN Aシークェンサ一 (ABI社製 PRISM377) を用い、 ダイ夕一 ミネーター法を用いた。 決定された塩基配列を元にしてオリゴヌクレオチドを合 成し、 プライマ一ウォーキング法で両鎖の全塩基配列を決定した。 当該クローン のじ DN Aの全塩基配列を配列番号 3に示す。 当該塩基配列が配列一 2及び配列 一 1のうち配列一 2の上流領域を含んでいたことから、 目的とする遺伝子 gmp 3 0がクローニングされたことを確認した。  The nucleotide sequence was determined using DNA Sequencer 1 (PRISM377, manufactured by ABI) and using the Daiyuichi Minator method. Oligonucleotides were synthesized based on the determined base sequences, and the entire base sequences of both strands were determined by the primer-walking method. SEQ ID NO: 3 shows the entire nucleotide sequence of the same DNA of the clone. Since the base sequence contained the upstream region of sequence 12 of sequence 12 and sequence 11, it was confirmed that the desired gene gmp30 was cloned.
当該 c DNAは 2 6 6残基より成る蛋白質 (GMP 3 0) をコードする ORF を含んでいる (配列番号 3) 。 該蛋白質の開始コドンであるメチォニン残基の上 流域に同じ reading frameで終止コドンが出現したことから、 当該 c DNA断片が コードする蛋白質のアミノ酸配列は配列番号 3に示したものが唯一のものである ことが確認された。  The cDNA contains an ORF encoding a protein consisting of 266 residues (GMP30) (SEQ ID NO: 3). Since a stop codon appeared in the same reading frame in the upstream region of the methionine residue which is the start codon of the protein, the amino acid sequence of the protein encoded by the cDNA fragment is the only one shown in SEQ ID NO: 3. It was confirmed that there was.
実施例 2. 動物細胞内での遺伝子 gmp 30の発現 Example 2. Expression of the gene gmp 30 in animal cells
1) 動物細胞発現用ベクターの構築 1) Construction of animal cell expression vector
配列番号 3の蛋白質の開始コドンより上流の配列を有するオリゴヌクレオチド (配列一 4) と、 終止コドンより下流の一部分の逆相補鎖の配列を有するオリゴ ヌクレオチド (配列— 5) を DNA合成機 (ABI社製 380B) で合成した。 An oligonucleotide having a sequence upstream of the initiation codon of the protein of SEQ ID NO: 3 (SEQ ID NO: 4) and an oligonucleotide (Sequence-5) having a sequence of a part of the reverse complementary strand downstream of the stop codon were synthesized using a DNA synthesizer (380B manufactured by ABI).
配列一 4  Sequence 1 4
5'-TATCTGCAGAATTCAGGATCCCTACC-3'  5'-TATCTGCAGAATTCAGGATCCCTACC-3 '
配列一 5  Sequence 1 5
5' - TCAATAATGTTTTTCTTGACTGTTCAAG- 3'  5 '-TCAATAATGTTTTTCTTGACTGTTCAAG- 3'
< 1. 遺伝子 gmp 3 0のクローニング〉で単離した配列番号 3を含む組み換 え c DNAを鎵型とし、 配列— 4と配列一 5のオリゴヌクレオチドをプライマ一 とし、 夕カラ LA PCR Kit Ver.2と P C Rサーマルサイクラ一 MP (いずれも宝酒 造製) を用いて、 以下の P C R操作を行った。  The recombinant cDNA containing SEQ ID NO: 3 isolated in <1. Cloning of gene gmp30> was designated as type III, and the oligonucleotides of sequence-4 and sequence-15 were designated as primers. .2 and PCR Thermal Cycler MP (both from Takara Shuzo) were used to perform the following PCR procedures.
cDNA 5 / 1  cDNA 5/1
10XPCRバッファ一(25mM Mg+ +を含む) 5 /x 1 10XPCR buffer (including 25mM Mg ++ ) 5 / x1
2.5mM dNTP 1 \  2.5mM dNTP 1 \
lO iM 配列一 4 l]i 1  lO iM array 1 4 l] i 1
10//M 配列一 5 2{i \  10 // M array 1 5 2 {i \
水 34.  Water 34.
LA Taq*°リメラ-セ' _ —0· 5 1  LA Taq * ° Limera-se '_ —0
総量 50 1  Total 50 1
P CRサイクルは、 9 4 °Cで 2分保持後、 9 8 °Cで 2 0秒間反応させ、 6 8 °C まで— 1 °CZ 2秒の速度で冷却し、 6 8 °Cで 3分保持し、 更に 7 2 °Cで 1 0分間 保持を 3 0回繰り返して行った。 上記方法により DNA断片 (約 1. 5 k b) を 特異的に増幅させた。  The PCR cycle consists of holding at 94 ° C for 2 minutes, reacting at 98 ° C for 20 seconds, cooling to 68 ° C — cooling at 1 ° C for 2 seconds, and 3 minutes at 68 ° C. The holding was further performed 30 times at 72 ° C. for 10 minutes. A DNA fragment (about 1.5 kb) was specifically amplified by the above method.
増幅された DNA断片 ( 1. 5 k b) を、 ゲル濃度 1 %のァガロースゲル電気 泳動で分画し、 ゲルをェチジゥムブロマイ ドで染色した後、 紫外線照射して目的 とするバンドを含むゲルを切り出した。 ァガロースゲルからの DNA断片の抽出 と精製は、 GENECLEAN II Kit (バイオ 1 0 1社製) を用いて行った。  The amplified DNA fragment (1.5 kb) is fractionated by agarose gel electrophoresis at a gel concentration of 1%, and the gel is stained with ethidium bromide and irradiated with ultraviolet light to contain the target band. The gel was cut out. Extraction and purification of DNA fragments from agarose gel were performed using GENECLEAN II Kit (Bio101).
この抽出精製した DNA断片を、 動物細胞発現用ベクター pTARGET (プロメガ社 製) にサブクローニングした。 Ligation溶液は夕カラ DNA Ligation Kit Ver.2 (宝酒造製) を用い、 以下の組成で 1 6°Cで 1. 5時間反応させた。 抽出精製した DN A断片 1 / 1 (50ng) The extracted and purified DNA fragment was subcloned into an animal cell expression vector pTARGET (promega). The ligation solution was reacted for 1.5 hours at 16 ° C with the following composition using Evening DNA Ligation Kit Ver.2 (Takara Shuzo). Extracted and purified DNA fragment 1/1 (50ng)
pTARGET 1111 (lOng)  pTARGET 1111 (lOng)
水 3 1  Water 3 1
Li gat ion溶液 5 1  Li gat ion solution 5 1
総量 10 1  Total 10 1
上記反応後の溶液を用いて、 大腸菌 K 1 2株 DH 5の形質転換を行った。 形質 転換体をアンピシリン (Amp) 5 0 g/m 1 5- Bromo- 4-Chloro - 3- indolyl - β -D-galactos ide 40 gZm 1、 Isopropyl- 3 -D-Thio-Galactopyranoside 1 0 0 /iMを含有する L B寒天培地にプレーティングし、 3 7 °Cで一晩培養した。 上記プレートに出現したコロニ一を 50 g/m 1の Ampを含む L B液体培 地 1 0m 1に接種して 3 7°Cで一晩培養し、 遠心分離によって菌体を集めた後、 QIAprep Spin Plasmid Miniprep Kit (キアゲン社製) で組換え DNAを精製し、 pTARGET- gmp30を得た。 この組み換えプラスミ ドは、 挿入断片の上流に C MVプロ モーターを有しており、 当該組み換えプラスミドを適当な動物細胞に導入すれば、 gmp 3 0を発現させることができる。  Using the solution after the above reaction, Escherichia coli K12 strain DH5 was transformed. Transformants were treated with ampicillin (Amp) 50 g / m 15-Bromo-4-Chloro-3-indolyl-β-D-galactoside 40 gZm1, Isopropyl-3-D-Thio-Galactopyranoside 100 / iM Was plated on an LB agar medium containing and cultured overnight at 37 ° C. The colonies appearing on the above plate were inoculated into 10 ml of LB liquid medium containing 50 g / m1 Amp, cultured at 37 ° C overnight, and the cells were collected by centrifugation. The recombinant DNA was purified using Plasmid Miniprep Kit (manufactured by Qiagen) to obtain pTARGET-gmp30. This recombinant plasmid has a CMV promoter upstream of the inserted fragment, and gmp30 can be expressed by introducing the recombinant plasmid into an appropriate animal cell.
2) CH〇 k 1細胞への組み換えベクターの導入  2) Introduction of recombinant vector into CH〇k1 cells
CHO k 1細胞を宿主とし、 直径 6 0mmのプラスチックシャーレをコラーゲ ンコ一卜したものに、 1 0 %牛胎児血清 (大日本製薬) 、 50ユニット Zmlぺ ニシリン、 5 0 gZm 1ストレプトマイシンを含む HamF-12培地 (ギブコ社製、 以下増殖培地とする) を使用して、 3 7°C、 5 %C〇2存在下で培養した。 Using a CHO k1 cell as a host, a collagen petri dish with a diameter of 60 mm was added to a collagen Petri dish, and HamF- containing 10% fetal bovine serum (Dainippon Pharmaceutical), 50 units of Zml ぺ nicillin, and 50 gZm of 1 streptomycin. (Gibco, hereinafter referred to as the growth medium) 12 medium was used to culture at 3 7 ° C, 5% C_〇 2 presence.
細胞密度が 50 %になった時点で、 pTARGET- gmp30を含む LIPOFECTAMINE試薬 (ギブコ社製) を、 細胞上に重層して 6時間培養した後、 増殖培地に置換して 4 8時間培養した。 トリプシンで細胞を分散した後、 細胞懸濁液を直径 6 0mmの プラスチックシャーレに分注してさらに 24時間培養した。  When the cell density reached 50%, a LIPOFECTAMINE reagent (manufactured by Gibco) containing pTARGET-gmp30 was overlaid on the cells, cultured for 6 hours, then replaced with a growth medium, and cultured for 48 hours. After dispersing the cells with trypsin, the cell suspension was dispensed into a 60 mm-diameter plastic petri dish and cultured for another 24 hours.
培地を除いた後、 G418試薬 (ギブコ社製、 終濃度 5 0 0 gZmL) を含有す る増殖培地に置換した後、 増殖培地を 3日毎に交換してして 2週間培養した。 細 胞のコロニーが肉眼で確認できるようになった時点で、 ステンレスカップを用い てコロニーを 3個単離した。 対照として用いるために CHO k 1細胞に pTARGETベ クタ一 (プロメガ社製) のみを上記と同様にして導入し、 安定な形質転換体を単 離した。 After removing the medium, the medium was replaced with a growth medium containing G418 reagent (manufactured by Gibco, 500 gZmL final concentration), and the growth medium was replaced every three days and cultured for 2 weeks. When the colonies of the cells became visible to the naked eye, three colonies were isolated using a stainless steel cup. To use as a control, pTARGET vector (Promega) alone was introduced into CHO k1 cells in the same manner as above, and a stable transformant was isolated. Released.
3) 形質転換体中の遺伝子発現の確認  3) Confirmation of gene expression in transformants
単離した各形質転換体を、 6穴のプレートで G418添加培地 (終濃度 500 /mL) で培養し、 細胞密度が 80 %コンフルェントになった時点で培地を除去 し、 PB Sを添加して洗浄後、 Trizol (ギブコ社製) を用いて細胞からそれぞれ 全 RNAを精製した。 2 gの全 RNAを铸型に、 Superscript逆転写酵素 (ギブ コ社製) を用いて c DNAを合成した。 さらにこの c DNAを铸型にして、 実施 例 2 _ 1 ) と同じオリゴヌクレオチド (配列 2、 3) を用いて PCR反応を実施 した。  Each isolated transformant was cultured on a G418-supplemented medium (final concentration 500 / mL) in a 6-well plate. When the cell density reached 80% confluence, the medium was removed, and PBS was added. After washing, total RNA was purified from the cells using Trizol (manufactured by Gibco). Using 2 g of total RNA as type II, cDNA was synthesized using Superscript reverse transcriptase (manufactured by Gibco). Further, using this cDNA as type III, a PCR reaction was carried out using the same oligonucleotides (sequences 2 and 3) as in Example 2-1).
cDNA 5^ 1  cDNA 5 ^ 1
10 X PCRバッファ (25mM Mg++を含む) 5^ 1 10 X PCR buffer (including 25 mM Mg ++ ) 5 ^ 1
2.5mM dNTP 1 1  2.5mM dNTP 1 1
配列一 2 lu \  Array one 2 lu \
ΙΟ^Μ 配列一 3 2 1  ΙΟ ^ Μ Sequence 1 3 2 1
水 34.5 t 1  Water 34.5 t 1
LA Taa リメラ-セ' 0.5^ί 1  LA Taa Limera-Se '0.5 ^ ί 1
総量 50 pi 1  Total volume 50 pi 1
P CRサイクルは、 94°Cで 2分保持後、 9 8 °Cで 2 0秒間反応させ、 6 8 °C まで— 1 2秒の速度で冷却し、 6 8 °Cで 3分保持し、 更に 7 2 °Cで 1 0分間 保持を 30回繰り返して行った。  In the PCR cycle, hold at 94 ° C for 2 minutes, react at 98 ° C for 20 seconds, cool to 68 ° C at a rate of 12 seconds, hold at 68 ° C for 3 minutes, Further, holding at 70 ° C. for 10 minutes was repeated 30 times.
反応物を 1 %ァガロースゲル電気泳動で分画し、 ェチジゥムブ口マイドで染色 した後、 紫外線照射して目的とするバンドが増幅されているか調べた。  The reaction product was fractionated by 1% agarose gel electrophoresis, stained with ethidium die, and irradiated with ultraviolet light to check whether the target band was amplified.
その結果、 pTARGET- gmp30を導入した CHO k 1細胞でのみ、 目的のバンドが増 幅され、 コント口一ルベクターを導入した CHOk 1細胞では、 増幅は確認でき なかった。  As a result, the band of interest was amplified only in CHO k1 cells into which pTARGET-gmp30 had been introduced, and no amplification could be confirmed in CHO k1 cells into which the control vector had been introduced.
試験例. インターフェロンァ刺激による遺伝子 gmp 3 0の発現応答 Test Example. Expression response of gmp30 gene induced by interferona
健常男性より単離した単球 1 00 000 0個を、 1 0 %非動化ゥシ胎児血清 (大日本製薬) 5 0ユニット ZmLペニシリン、 5 0 g/mLストレプトマイ シンを含む RM 1640培地中で、 最終濃度 1 00 0ュニッ ト ZmLとなるようにィ ン夕一フエロンァ ( I FN- τ) を添加して、 さらに 24時間培養した。 コント 口一ルとして I FN—ァを含まない培地で単球を調製した。 100 000,000 monocytes isolated from healthy males were used in a 10% non-mobilized ゥ fetal serum (Dainippon Pharmaceutical Co., Ltd.) in RM 1640 medium containing 50 units ZmL penicillin and 50 g / mL streptomycin. To achieve a final concentration of 1000 units The cells were further cultured for 24 hours after the addition of the fermenter (IFN-τ). Monocytes were prepared in a medium without IFN-I as a control.
培養後、 培地を除去し、 PB Sを添加し洗浄後、 Trizol (ギブコ社製) を用い て細胞からそれぞれ全 RNAを精製した。 2 gの全 RN Aを銬型に、 Superscr ipt逆転写酵素 (ギブコ社製) を用いて c DNAを合成した。 さらにこの c DNA を铸型にして、 配列一 2と配列— 3を用いて P CR反応を実施した。  After the culture, the medium was removed, PBS was added and the cells were washed, and then total RNA was purified from the cells using Trizol (manufactured by Gibco). 2 g of all RNAs were converted into type II and cDNA was synthesized using Superscript reverse transcriptase (manufactured by Gibco). Further, this cDNA was made into type III, and a PCR reaction was carried out using SEQ ID NO: 2 and SEQ ID NO: 3.
cDNA 5 1  cDNA 5 1
10XPCRバッファー(25mM Mg+ +を含む) 5 1 10XPCR buffer (including 25mM Mg ++ ) 5 1
2.5mM dNTP 1 n 1  2.5mM dNTP 1 n 1
10 t M 配列— 2 2^ 1  10 t M array—2 2 ^ 1
IO M 配列— 3 2fi l  IO M array — 3 2fi l
水 34· 5 1  Water 34
LA TaqTリメラ-セ 一 一 0.5 1  LA TaqT Limera-1 1 1 1
50 1  50 1
PCRサイクルは、 94 °Cで 2分保持後、 9 8 °Cで 20秒間反応させ、 68 °C まで— 1 °C/ 2秒の速度で冷却し、 68 Xで 3分保持し、 更に 72 °Cで 10分間 保持を 30回繰り返して行った。  The PCR cycle consists of holding at 94 ° C for 2 minutes, reacting at 98 ° C for 20 seconds, cooling to 68 ° C at a rate of 1 ° C / 2 seconds, holding at 68X for 3 minutes, The holding at 10 ° C. for 10 minutes was repeated 30 times.
反応物を 1 %ァガロースゲル電気泳動で分画し、 ェチジゥムブ口マイドで染色 した後、 紫外線照射して目的とするバンドが増幅されているか調べた。  The reaction product was fractionated by 1% agarose gel electrophoresis, stained with ethidium amide, and irradiated with ultraviolet light to check whether the target band was amplified.
その結果、 I FN—ァで刺激した単球において、 遺伝子 gmp 30が有意に高 発現している事が確認できた。  As a result, it was confirmed that the gene gmp30 was significantly highly expressed in monocytes stimulated with IFN-α.

Claims

請 求 の 範 囲 The scope of the claims
1 以下の (a) または (b) の蛋白質;  1 The following (a) or (b) protein:
(a) 配列番号: 1に記載のアミノ酸配列からなる蛋白質;  (a) a protein consisting of the amino acid sequence of SEQ ID NO: 1;
(b) 配列番号: 1のアミノ酸配列において 1もしくは数個のアミノ酸が欠失、 置換もしくは付加されたアミノ酸配列からなり、 かつ炎症調節活性を有する蛋白  (b) a protein comprising an amino acid sequence in which one or several amino acids are deleted, substituted or added in the amino acid sequence of SEQ ID NO: 1, and having an inflammatory regulatory activity
2 以下の (a) または (b) の DNA 2 DNA of (a) or (b) below
(a) 配列番号: 2に記載の塩基配列からなる DN A  (a) DNA comprising the nucleotide sequence of SEQ ID NO: 2
(b) 配列番号: 2の DNAとストリンジェン卜な条件でハイブリダィズし かつ炎症調節活性を有する蛋白質をコードする DNA。  (b) a DNA that hybridizes with the DNA of SEQ ID NO: 2 under stringent conditions and encodes a protein having an inflammatory regulatory activity.
PCT/JP1999/004351 1998-08-12 1999-08-11 Novel gene and protein gmp30 encoded thereby WO2000009687A1 (en)

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WO1998025959A2 (en) * 1996-12-11 1998-06-18 Chiron Corporation Secreted human proteins
WO1998033913A1 (en) * 1997-01-31 1998-08-06 Incyte Pharmaceuticals, Inc. Human integral membrane protein
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WO1998020130A2 (en) * 1996-11-01 1998-05-14 Genetics Institute, Inc. Secreted proteins and polynucleotides encoding them
WO1998025959A2 (en) * 1996-12-11 1998-06-18 Chiron Corporation Secreted human proteins
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WO2001065259A1 (en) * 2000-03-02 2001-09-07 Genox Research, Inc. Method of examining allergic diseases

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