WO2000043779A1 - Identification des ligands d'un recepteur capable de s'internaliser - Google Patents
Identification des ligands d'un recepteur capable de s'internaliser Download PDFInfo
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- WO2000043779A1 WO2000043779A1 PCT/FR2000/000113 FR0000113W WO0043779A1 WO 2000043779 A1 WO2000043779 A1 WO 2000043779A1 FR 0000113 W FR0000113 W FR 0000113W WO 0043779 A1 WO0043779 A1 WO 0043779A1
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- Prior art keywords
- receptor
- ligand
- internalization
- receptors
- cell
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Classifications
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- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/5005—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells
- G01N33/5008—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells for testing or evaluating the effect of chemical or biological compounds, e.g. drugs, cosmetics
- G01N33/502—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells for testing or evaluating the effect of chemical or biological compounds, e.g. drugs, cosmetics for testing non-proliferative effects
- G01N33/5035—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells for testing or evaluating the effect of chemical or biological compounds, e.g. drugs, cosmetics for testing non-proliferative effects on sub-cellular localization
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- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/5005—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells
- G01N33/5008—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells for testing or evaluating the effect of chemical or biological compounds, e.g. drugs, cosmetics
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- G—PHYSICS
- G01—MEASURING; TESTING
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- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/566—Immunoassay; Biospecific binding assay; Materials therefor using specific carrier or receptor proteins as ligand binding reagents where possible specific carrier or receptor proteins are classified with their target compounds
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
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- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/58—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving labelled substances
- G01N33/582—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving labelled substances with fluorescent label
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- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N2333/00—Assays involving biological materials from specific organisms or of a specific nature
- G01N2333/435—Assays involving biological materials from specific organisms or of a specific nature from animals; from humans
- G01N2333/705—Assays involving receptors, cell surface antigens or cell surface determinants
- G01N2333/715—Assays involving receptors, cell surface antigens or cell surface determinants for cytokines; for lymphokines; for interferons
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- G—PHYSICS
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- G01N2333/00—Assays involving biological materials from specific organisms or of a specific nature
- G01N2333/435—Assays involving biological materials from specific organisms or of a specific nature from animals; from humans
- G01N2333/705—Assays involving receptors, cell surface antigens or cell surface determinants
- G01N2333/72—Assays involving receptors, cell surface antigens or cell surface determinants for hormones
- G01N2333/726—G protein coupled receptor, e.g. TSHR-thyrotropin-receptor, LH/hCG receptor, FSH
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- G01N2333/90—Enzymes; Proenzymes
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- G01N2333/91205—Phosphotransferases in general
- G01N2333/9121—Phosphotransferases in general with an alcohol group as acceptor (2.7.1), e.g. general tyrosine, serine or threonine kinases
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Definitions
- the present invention relates to a screening method applicable to the identification of potential ligands for a receptor capable of internalizing.
- the invention relates more particularly, but not exclusively, to receptors belonging to the family of receptors with 7 transmembrane domains coupled to G proteins as well as those of the family of tyrosine kinase receptors to a single transmembrane domain.
- GPCR G proteins
- valorization on a therapeutic level implies beforehand to isolate their endogenous ligand and, by the same token, to elucidate their function.
- the identification process consisting in evaluating the production of second messengers requires knowing the signaling pathway of the receptor. In the presence of an orphan receptor, having no idea of the path involved, it is necessary to test all of the known signaling pathways with the hope that the receptor of interest is not coupled to a path still unknown. This therefore requires having a large amount of sample. This approach also implies that the receptor of interest is coupled to a cascade of second messengers in the heterologous transfection systems in which they are expressed, which is not necessarily the case.
- the object of the present invention is precisely to propose a new method for detecting and / or identifying ligands for orphan receptors which proves to be more reliable than those mentioned above, feasible on samples of low volumes and usable in the presence of other endogenous receptors and a large number of ligands, peptide or non-peptide, for these annexed endogenous receptors.
- the method developed in the context of the present invention takes advantage of the properties of receptors with seven transmembrane domains, coupled to G proteins, or tyrosine kinase receptors, of internalizing in the cells which express them under the action of agonist ligands. Internalization is a fairly universal phenomenon that affects a large number of receptors.
- ⁇ -arestine 2 the option of labeling either a ligand or a protein involved in signal transduction or in the desensitization of a receptor after activation, such as labeled ⁇ -arestine 2, is not completely reliable. There may indeed remain an ambiguity as to the identity of the receiver whose internalization has been followed. Moreover recent data suggest that different proteins may be involved in the internalization and desensitization mechanisms of various receptors. ⁇ -arestine 2, in particular, does not seem to play a universal role. For example, when monitoring the mobilization of ⁇ -arestine coupled to EGFP, during stimulation of the orphan receptor by its ligand, there is phosphorylation of the receptor which can then fix the mobilized ⁇ -arestine2-GFP from the membrane cytoplasm.
- the claimed screening method precisely has the advantage of removing this indeterminacy.
- the present invention relates to a method useful for detecting and / or identifying in a library of peptide, pseudopeptide or non-peptide compounds, a biological extract and / or a purified fraction of a tissue extract, a ligand of a receptor of interest and capable of undergoing internalization induced by the binding of said ligand, characterized in that it comprises at least the steps consisting in: - expressing said receptor in a form marked on the surface of a cell,
- the present invention therefore involves labeling the orphan receptor for which, in particular, potential agonists are sought.
- the fact of marking in itself the orphan receptor is clearly advantageous with regard to the detection techniques mentioned above. Indeed, this approach offers the possibility of directly visualizing the target studied.
- the receptor When the receptor is brought into contact with the endogenous ligand, it is the ligand-receptor-marker complex which is internalized. There is no ambiguity about the identity of the internalized receptor.
- the cell constitutively overexpresses the labeled receptor.
- the labeling is intracellular, on the cytoplasmic tail of the receptor and therefore has the advantage of not hindering the binding of the ligand.
- markers suitable for the invention may be either an autofluorescent protein or an epitopic marker capable of being detected by immunohistochemistry.
- the fluorescent proteins which can be used in the claimed process preferably belong to the family of wild fluorescent protein GFP and its mutants (Ex: EGFP, EBFP and EYFP).
- EGFP wild fluorescent protein GFP
- EBFP EBFP
- EYFP mutant fluorescent protein GFP
- non-fluorescent markers capable of also being used according to the invention, mention may be made most particularly of hemaglutinin, polyhistidine, myc and flag proteins and viral epitopes.
- highly immunogenic compounds there are already commercially highly selective antibodies (e.g. monoclonal antimyc antibodies, Clontech; antihemaglutinin influenza antibodies, Boehringer; anti-vesicular somatostatitis virus antibody, Clontech; anti-polyhistidine antibody, In Vitrogen).
- This type of labeling is particularly advantageous insofar as it allows a high measurement sensitivity which results in the detection of a ligand concentration of the order of 10 "8 M, that is to say 100 fmoles in 10
- the internalization of the complex is visible by confocal or even optical microscopy when the receptor is strongly expressed and if the ligand is in sufficient concentration (minimum 10 "8 M).
- This internalization is preferably detected by confocal and / or optical microscopy.
- the other endogenous, unlabeled receptors present on the surface of the host cells are not visible and do not interfere with the measurement. No background noise is therefore noted, which is particularly interesting in view of the high sensitivity of the measurement method.
- the claimed method turns out to have sufficient sensitivity to allow visualization of an internalization of a receptor-ligand conjugate within the fraction tested notwithstanding the presence of other endogenous receptors and a large number of ligands, peptide or non-peptide for these additional endogenous receptors.
- the claimed screening method proves to be suitable for the study of any receptor provided that it has the capacity to internalize.
- the receptor of interest is coupled to a protein G.
- the claimed method is particularly interesting for characterizing receptor ligands belonging to the receptor family with 7 transmembrane domains coupled to the G protein, the GPCRs, to the family of tyrosine kinase receptors with a single transmembrane domain or to the family of cytokine receptors.
- labeling receptors at C-terminal has the following advantages:
- the expression detection method is rapid and can be carried out on non-fixed living cells.
- the receptor to be studied is coupled to a marker and then expressed on the surface of a host cell.
- these two operations namely the labeling and expression of said receptor at the level of a host cell, they of course both fall within the competence of those skilled in the art.
- the procedure is as follows: The sequence of the coding part of the receptor of interest is inserted in phase, in an expression vector, upstream or downstream of the coding sequence of the fluorescent protein (GFP, EGFP, EBFP, EYFP) or an epitopic marker.
- These expression vectors (of the pGFP-N1 or pGFP-C1, N1 or C1 type indicate the position of the receptor relative to the protein either at the N-terminal or at the C-terminal) already contain the sequence of these markers.
- the cells are transfected by a conventional method (such as the liposome method, calcium phosphate), then selected for their resistance to an antibiotic.
- a conventional method such as the liposome method, calcium phosphate
- proteins of the GFP family it is possible to sort the cells expressing the receptor coupled to the fluorescent protein by flow cytometry.
- these are eukaryotic cells such as, for example, epithelial cells from monkey kidneys: COS-7; hamster ovaries: CHO; and human embryonic kidney cells: HEK 293).
- the two receivers are of course capable of internalizing. This option thus offers the possibility of screening potential ligands for several receptors simultaneously on the same sample.
- the host cells are brought into contact with a potential ligand.
- the cells are therefore brought into contact with either a bank of peptide, pseudopeptide or non-peptide compounds, a biological extract or even purified fractions of a tissue extract.
- This contacting is carried out under conditions sufficient to allow cellular internalization of the receptor-marker-ligand complex (s). These sufficient conditions are of course appreciated by those skilled in the art, in terms of temperature, duration and concentration. It may also be necessary to carry out repeated experiments.
- internalization of ligand-receptor complexes in mammalian cells is optimal at 37 ° C.
- the average half-life of the internalization process (time required for 50% of occupied surface receptors to be internalized) is around 10 minutes.
- exposures to the ligand of 20 to 40 minutes are usually optimal for the identification of internalized receptors, the optimal ligand concentrations are of the order of 10 to 20 times the affinity of the ligand for its receptor (Kd).
- the visualization is carried out directly by observing the displacement of the fluorescence.
- the receptor is labeled with a non-fluorescent antigen
- the internalization is visualized by confocal microscopy after fixation of the cells and detection of the antigenic epitopes by secondary antibodies coupled to a fluorophore.
- the antigenic epitopes can be revealed by an enzymatic reaction, or with the help of a radioactive antibody which is concretized in both cases by the accumulation of opaque deposits visible both by light and electron microscopy.
- the claimed method proves to be particularly advantageous for detecting and / or identifying the endogenous ligand (s) of an orphan receptor or else identifying new agonists or antagonists for a known receptor, that is to say which knows the endogenous ligand.
- this method proves to be particularly useful for the search for ligands for orphan receptors and more particularly receptors for peptides, using biological preparations such as tissue extracts.
- the present invention also extends to any ligand of a receptor of interest, identified using the claimed method.
- the examples and figures submitted below are presented by way of non-limiting illustration of the present invention.
- FIGURES Figures 1 Figure 1a: Visualization by confocal microscopy of the neurotensin type 1 receptor coupled to the fluorescent protein EGFP (NTR1-
- FIG. 1b Visualization of the internalization of the NTR1-EGFP receptor characterized by the formation of numerous fluorescent cytoplasmic vesicles of 0.6 ⁇ m in diameter inside CHO cells incubated with neurotensin concentrations of 10 and 100 nM.
- Figures 2 Visualization of the internalization of the NTR1- receptor
- EGFP with or without acid washing, in the presence of: 10 nM of neurotensin (FIG. 2a) or of a purified fraction of extract of frog brains (FIG. 2b).
- the conditions are the same as in FIG. 1, and also include an acid wash of the endogenous ligand still bound to the surface of the cells at the end of the charge period.
- Figure 3 Internalization of the NTR1-EGFP receptor in the presence of 10 prepurified fractions of an extract of frog brains.
- Figure 4 Radioimmunoassay of the prepurified fractions of an extract of frog brains using an antibody directed against the conserved region of neurotensin. Materials and methods
- the amplified sequence was inserted into the expression vector pEGFP-N1 (Clontech) at the Hindlll and BamH1 sites.
- the construction was verified on an AbiPrism 377 automatic sequencer (Perkin-Elmer) using fluorescent ddNTPs.
- the CHO-K1 cells (American Type Culture Collection: ATCC) were cultured in a humid atmosphere at 5% CO2, in F12 medium supplemented with 7.5% fetal calf serum, 1 mM glutamine, 100 units / ml of penicillin and 100 units / ml streptomycin (Boehringer
- CHO-K1 (approximately 2.6x106 cells) were transfected with 8 ⁇ g of plasmid using cationic liposomes (Dosper, Boehringer). The transfected cells are selected for their resistance to geneticin. The clones obtained were sorted using flow cytometry which takes into account the intensity of the fluorescence of each cell. A second selection was made using a fluorescence microscope, observing the level of expression of the fluorescent NTR1-EGFP receptor, located on the membrane surface of the cells of each of the clones. 3) Pre-purification of frog brain extract
- 2541 brains of male green frog (species Rana ridibunda), corresponding to a weight of fresh tissue of 215 g, were collected in the laboratory from freshly sacrificed animals. The brains were frozen on dry ice immediately after being removed and stored at -80 ° C.
- the brains were immersed for 15 min in 0.5 M boiling acetic acid (2 liters), then homogenized in a mixer. The homogenate was centrifuged at 4000 x g for 30 min at 4 ° C. The supernatant was then prefiltered on an assembly of 10 columns of Sep-Pak C18 (Waters Associates, Milford, MA) mounted in series at a flow rate of 2 ml / min. The material fixed on the Sep-Pak columns was eluted with 20 ml of a 70% acetonitrile solution. This operation was repeated 2 times.
- the material eluted from the Sep-Pak columns was partially evaporated in order to remove the acetonitrile, then centrifuged at 13,000 xg for 5 min. The supernatant was removed and divided into 2. Each of the 2 pools was then injected into a Vydac C18 218TP1010 semi-preparative column (1 x 25 cm) (The Séparations Group, Hesperia, CA) balanced with a solution of water / trifluoroacetic acid (99.9: 0.1; vo vol) at a flow rate of 2 ml / min.
- Peptide material attached to the matrix was eluted using an acetonitrile gradient rising from 14 to 42% in 40 min at a flow rate of 2 ml / min, then rising from 42 to 56% for 60 min at a flow rate 1 ml / min.
- the eluate was collected in 1 min fraction and the absorbance measured at 215 and 280 nm.
- the elution fractions were stored at -20 ° C. Before the experiments internalisation, each of the fractions was diluted with water, partially evaporated in order to remove the acetonitrile, and made up to a final volume of 50 ⁇ l.
- the cells are distributed (50% confluence, 20,000 cells per well) then cultured overnight on multi-well slides (LabTek, Nunc) pretreated with polyallylamine (0.1 mg / ml, Aldrich) . On these slides, the volume of incubations (except for the loading period) and washes is 250 ⁇ l per well. 90 min before the start of the experiment, the cell medium is changed to a medium supplemented with cycloheximide (70 ⁇ M, Sigma).
- the cells are then preincubated for 15 min on ice in cold Earle's buffer (pH 7.4, containing 140 mM NaCI, 5 mM KG, 1.8 mM CaCI 2 , 3.6 mM MgCI 2 , 0.1% albumin bovine serum, 0.01% glucose and 0.8 mM 1.10-phenanthroline).
- the cells are then incubated for 30 min with the ligand diluted in 50 ⁇ l of Earle's buffer at 4 ° C (loading period).
- a batch of cells is subjected to a hypertonic acid wash (0.2 M acetic acid and 0.5 mM NaCl in Earle's buffer, pH 4 for 2 min at 4 ° C.) in order to dissociate the ligand of its surface receptors.
- Internalization is caused by replacing the medium with Earle's buffer at 37 ° C and incubation of the slides at 37 ° C for 20 to 30 min (hunting period).
- the cells are rinsed with cold Earle's buffer, fixed with 4% paraformaldehyde dissolved in 0.1 M phosphate buffer at pH 7.4, rinsed again in cold Earle's buffer and then assembled. using Vectashield (Vector).
- the cells are examined with a Leica TCS NT confocal microscope configured with an inverted microscope (Leica DM IRBE) equipped with an argon / krypton laser with excitation and emission filters of 488 and 530-600 nm respectively. 1024-1024 pixel images of individual cells are obtained using a 63x oil immersion objective. 6) Radioimmunoassay of neurotensin on prepurified fractions of an extract of frog brains
- a volume of 5 ⁇ l of each fraction collected at the outlet of semi-preparative HPLC is subjected to a radioimmunoassay of neurotensin.
- the neurotensin assay was carried out using an antibody directed against the C-terminal fragment of the pig neurotensin
- the antibody is used at a final dilution of 1: 50,000, and the sensitivity of the assay is 10 pg.
- the radioimmunoassay is carried out at 4 ° C in a 0.02 M veronal buffer (pH 8.6) containing 4% bovine serum albumin and 7000 cpm of (3- [125i] iodotyrosyl) neurotensin (Amersham, Buckingamshire, UK ). The samples and the antibody were incubated at 4 ° C for 48 h.
- the separation of the tracer fraction linked to the antibody was carried out by precipitation by adding to each sample a solution of ⁇ -globulins (1% in 0.02 M veronal buffer) and a solution of polyethylene glycol (20% in 0.02 M veronal buffer containing 0.1% bovine serum albumin and 0.1% newt X-100). After an incubation of 20 min at room temperature, the samples are centrifuged (3000 x g, 30 min) and the pellets counted in a gamma counter.
- NTR1-EGFP receptor Characterization of the NTR1 -EGFP receptor
- the NTR1-EGFP receptor is stably expressed in the CHO cell line and its binding and intracellular signal transmission properties have been determined.
- the affinity of neurotensin was found to be of the same order (0.3 nM) for the NTR1-EGFP receptor and the wild-type NT1 receptor.
- the labeled receptor leads to the production of phosphate inositols with an EC50 (1 nM) identical to that obtained for the wild-type NT1 receptor (results not shown).
- fractions in pool 2 that is to say fractions 11 to 20 (0.5 ⁇ l of volume of original fraction diluted to 50 ⁇ l with Ear's buffer) were tested individually. Only fractions 15,16,17,18 induce the internalization of the NTR1-EGFP receptor (Fig. 3). This internalization is not detected if the cells are subjected to an acid wash at the end of the charge period (Fig. 2b) indicating that the internalization observed is the result of the binding of a specific ligand to the NTR1-EGFP receptors during the loading period.
- the radioimmunoassay of the prepurified fractions of a frog brain extract using an antibody directed against the conserved region of neurotensin shows that the immunoreactive material is exclusively contained in the fractions 15,16,17,18 (Fig. 4).
- the total apparent amount of neurotensin measured in the elution fractions of the semi-preparative HPLC is 894 ng in 16 ml, which corresponds to a value of 352 pg of peptide per frog brain. Consequently, the material causing the internalization of the NTR1-EGFP receptor, contained in the fractions 15,16,17,18 corresponds to the endogenous neurotensin of the frog brain.
- the internalization process described above is a direct, simple, specific and reliable means, making it possible to detect, from the observation of a single cell, an amount of neurotensin as low as 500 fmoles in 50 ⁇ l. It appears that this measurement can be carried out both on a pure neurotensin solution and on a fraction of tissue extract containing not only neurotensin but also a large number of other neuropeptides (the minimum estimated number per fraction being 50 peptides) , with a similar sensitivity since we manage to detect, according to the RIA assay, about 250 fmoles.
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JP2000595149A JP2002535654A (ja) | 1999-01-20 | 2000-01-19 | インターナリゼーションによって細胞内に取込まれ得る受容体リガンドの同定方法 |
CA002359213A CA2359213A1 (fr) | 1999-01-20 | 2000-01-19 | Identification des ligands d'un recepteur capable de s'internaliser |
EP00900617A EP1145003A1 (fr) | 1999-01-20 | 2000-01-19 | Identification des ligands d'un recepteur capable de s'internaliser |
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FR9900588A FR2788602B1 (fr) | 1999-01-20 | 1999-01-20 | Procede de criblage utile pour identifier des ligands potentiels pour un recepteur capable de s'internaliser |
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WO2002052268A1 (fr) * | 2000-12-22 | 2002-07-04 | Active Biotech Ab | Dosage biologique d'antagonistes de recepteurs de leucocytes humains |
EP1579212A2 (fr) * | 2002-10-25 | 2005-09-28 | Molecular Devices Corporation | Methodes d'identification d'agonistes du recepteur transmembranaire a internalisation reduite |
GB2439377A (en) * | 2006-06-09 | 2007-12-27 | Pasteur Institut Korea | Methods of identifying modulators of and modulating GPCR cellular distribution and medical uses thereof |
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DE102005003687A1 (de) * | 2005-01-26 | 2006-07-27 | Sphingo Tec Gmbh | Immunoassay zur Bestimmung der Freisetzung von Neurotensin in die Zirkulation |
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- 2000-01-19 WO PCT/FR2000/000113 patent/WO2000043779A1/fr not_active Application Discontinuation
- 2000-01-19 JP JP2000595149A patent/JP2002535654A/ja not_active Withdrawn
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Cited By (4)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2002052268A1 (fr) * | 2000-12-22 | 2002-07-04 | Active Biotech Ab | Dosage biologique d'antagonistes de recepteurs de leucocytes humains |
EP1579212A2 (fr) * | 2002-10-25 | 2005-09-28 | Molecular Devices Corporation | Methodes d'identification d'agonistes du recepteur transmembranaire a internalisation reduite |
EP1579212A4 (fr) * | 2002-10-25 | 2007-02-14 | Molecular Devices Corp | Methodes d'identification d'agonistes du recepteur transmembranaire a internalisation reduite |
GB2439377A (en) * | 2006-06-09 | 2007-12-27 | Pasteur Institut Korea | Methods of identifying modulators of and modulating GPCR cellular distribution and medical uses thereof |
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EP1145003A1 (fr) | 2001-10-17 |
CA2359213A1 (fr) | 2000-07-27 |
FR2788602B1 (fr) | 2002-06-07 |
JP2002535654A (ja) | 2002-10-22 |
FR2788602A1 (fr) | 2000-07-21 |
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