WO1998039347A2 - Synthesis of l-ribose and 2-deoxy l-ribose - Google Patents
Synthesis of l-ribose and 2-deoxy l-ribose Download PDFInfo
- Publication number
- WO1998039347A2 WO1998039347A2 PCT/US1998/004302 US9804302W WO9839347A2 WO 1998039347 A2 WO1998039347 A2 WO 1998039347A2 US 9804302 W US9804302 W US 9804302W WO 9839347 A2 WO9839347 A2 WO 9839347A2
- Authority
- WO
- WIPO (PCT)
- Prior art keywords
- ribose
- recited
- deoxy
- tetraester
- yield
- Prior art date
Links
- PYMYPHUHKUWMLA-MROZADKFSA-N aldehydo-L-ribose Chemical compound OC[C@H](O)[C@H](O)[C@H](O)C=O PYMYPHUHKUWMLA-MROZADKFSA-N 0.000 title claims abstract description 52
- ASJSAQIRZKANQN-UHNVWZDZSA-N 2-deoxy-L-arabinose Chemical compound OC[C@H](O)[C@H](O)CC=O ASJSAQIRZKANQN-UHNVWZDZSA-N 0.000 title claims abstract description 26
- 230000015572 biosynthetic process Effects 0.000 title abstract description 10
- 238000003786 synthesis reaction Methods 0.000 title abstract description 8
- PYMYPHUHKUWMLA-UHFFFAOYSA-N arabinose Natural products OCC(O)C(O)C(O)C=O PYMYPHUHKUWMLA-UHFFFAOYSA-N 0.000 claims abstract description 65
- SRBFZHDQGSBBOR-UHFFFAOYSA-N beta-D-Pyranose-Lyxose Natural products OC1COC(O)C(O)C1O SRBFZHDQGSBBOR-UHFFFAOYSA-N 0.000 claims abstract description 47
- 238000000034 method Methods 0.000 claims abstract description 44
- PYMYPHUHKUWMLA-LMVFSUKVSA-N aldehydo-D-ribose Chemical compound OC[C@@H](O)[C@@H](O)[C@@H](O)C=O PYMYPHUHKUWMLA-LMVFSUKVSA-N 0.000 claims abstract description 40
- HMFHBZSHGGEWLO-UHFFFAOYSA-N alpha-D-Furanose-Ribose Natural products OCC1OC(O)C(O)C1O HMFHBZSHGGEWLO-UHFFFAOYSA-N 0.000 claims abstract description 40
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 claims abstract description 30
- HMFHBZSHGGEWLO-SOOFDHNKSA-N D-ribofuranose Chemical compound OC[C@H]1OC(O)[C@H](O)[C@@H]1O HMFHBZSHGGEWLO-SOOFDHNKSA-N 0.000 claims abstract description 29
- 150000001299 aldehydes Chemical class 0.000 claims abstract description 17
- OZAIFHULBGXAKX-UHFFFAOYSA-N 2-(2-cyanopropan-2-yldiazenyl)-2-methylpropanenitrile Chemical compound N#CC(C)(C)N=NC(C)(C)C#N OZAIFHULBGXAKX-UHFFFAOYSA-N 0.000 claims abstract description 15
- DBGVGMSCBYYSLD-UHFFFAOYSA-N tributylstannane Chemical compound CCCC[SnH](CCCC)CCCC DBGVGMSCBYYSLD-UHFFFAOYSA-N 0.000 claims abstract description 15
- OZAIFHULBGXAKX-VAWYXSNFSA-N AIBN Substances N#CC(C)(C)\N=N\C(C)(C)C#N OZAIFHULBGXAKX-VAWYXSNFSA-N 0.000 claims abstract description 13
- MJOQJPYNENPSSS-XQHKEYJVSA-N [(3r,4s,5r,6s)-4,5,6-triacetyloxyoxan-3-yl] acetate Chemical compound CC(=O)O[C@@H]1CO[C@@H](OC(C)=O)[C@H](OC(C)=O)[C@H]1OC(C)=O MJOQJPYNENPSSS-XQHKEYJVSA-N 0.000 claims abstract description 13
- 230000002829 reductive effect Effects 0.000 claims abstract description 9
- YLQBMQCUIZJEEH-UHFFFAOYSA-N tetrahydrofuran Natural products C=1C=COC=1 YLQBMQCUIZJEEH-UHFFFAOYSA-N 0.000 claims abstract description 8
- DJOWTWWHMWQATC-KYHIUUMWSA-N Karpoxanthin Natural products CC(=C/C=C/C=C(C)/C=C/C=C(C)/C=C/C1(O)C(C)(C)CC(O)CC1(C)O)C=CC=C(/C)C=CC2=C(C)CC(O)CC2(C)C DJOWTWWHMWQATC-KYHIUUMWSA-N 0.000 claims abstract description 7
- 238000006859 Swern oxidation reaction Methods 0.000 claims abstract description 5
- 230000008707 rearrangement Effects 0.000 claims abstract description 4
- -1 methyl riboside Chemical class 0.000 claims description 44
- JUJWROOIHBZHMG-UHFFFAOYSA-N Pyridine Chemical compound C1=CC=NC=C1 JUJWROOIHBZHMG-UHFFFAOYSA-N 0.000 claims description 34
- 239000000203 mixture Substances 0.000 claims description 31
- RTZKZFJDLAIYFH-UHFFFAOYSA-N Diethyl ether Chemical compound CCOCC RTZKZFJDLAIYFH-UHFFFAOYSA-N 0.000 claims description 28
- QTBSBXVTEAMEQO-UHFFFAOYSA-N Acetic acid Chemical compound CC(O)=O QTBSBXVTEAMEQO-UHFFFAOYSA-N 0.000 claims description 26
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 claims description 24
- UMJSCPRVCHMLSP-UHFFFAOYSA-N pyridine Natural products COC1=CC=CN=C1 UMJSCPRVCHMLSP-UHFFFAOYSA-N 0.000 claims description 17
- 239000002904 solvent Substances 0.000 claims description 16
- 125000004029 hydroxymethyl group Chemical group [H]OC([H])([H])* 0.000 claims description 14
- IAZDPXIOMUYVGZ-UHFFFAOYSA-N Dimethylsulphoxide Chemical compound CS(C)=O IAZDPXIOMUYVGZ-UHFFFAOYSA-N 0.000 claims description 12
- BWHMMNNQKKPAPP-UHFFFAOYSA-L potassium carbonate Chemical compound [K+].[K+].[O-]C([O-])=O BWHMMNNQKKPAPP-UHFFFAOYSA-L 0.000 claims description 12
- ZMANZCXQSJIPKH-UHFFFAOYSA-N Triethylamine Chemical group CCN(CC)CC ZMANZCXQSJIPKH-UHFFFAOYSA-N 0.000 claims description 11
- CPELXLSAUQHCOX-UHFFFAOYSA-N Hydrogen bromide Chemical compound Br CPELXLSAUQHCOX-UHFFFAOYSA-N 0.000 claims description 10
- BDAGIHXWWSANSR-UHFFFAOYSA-N methanoic acid Natural products OC=O BDAGIHXWWSANSR-UHFFFAOYSA-N 0.000 claims description 10
- DNJIEGIFACGWOD-UHFFFAOYSA-N ethyl mercaptane Natural products CCS DNJIEGIFACGWOD-UHFFFAOYSA-N 0.000 claims description 9
- QAEDZJGFFMLHHQ-UHFFFAOYSA-N trifluoroacetic anhydride Chemical compound FC(F)(F)C(=O)OC(=O)C(F)(F)F QAEDZJGFFMLHHQ-UHFFFAOYSA-N 0.000 claims description 9
- SRBFZHDQGSBBOR-HWQSCIPKSA-N L-arabinopyranose Chemical compound O[C@H]1COC(O)[C@H](O)[C@H]1O SRBFZHDQGSBBOR-HWQSCIPKSA-N 0.000 claims description 8
- 230000003301 hydrolyzing effect Effects 0.000 claims description 8
- 239000003999 initiator Substances 0.000 claims description 7
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 claims description 7
- YWBHROUQJYHSOR-UHFFFAOYSA-N $l^{1}-selanylbenzene Chemical compound [Se]C1=CC=CC=C1 YWBHROUQJYHSOR-UHFFFAOYSA-N 0.000 claims description 6
- 238000004440 column chromatography Methods 0.000 claims description 6
- 125000002887 hydroxy group Chemical group [H]O* 0.000 claims description 6
- 229910000027 potassium carbonate Inorganic materials 0.000 claims description 6
- RMVRSNDYEFQCLF-UHFFFAOYSA-N thiophenol Chemical compound SC1=CC=CC=C1 RMVRSNDYEFQCLF-UHFFFAOYSA-N 0.000 claims description 6
- OSWFIVFLDKOXQC-UHFFFAOYSA-N 4-(3-methoxyphenyl)aniline Chemical compound COC1=CC=CC(C=2C=CC(N)=CC=2)=C1 OSWFIVFLDKOXQC-UHFFFAOYSA-N 0.000 claims description 5
- HMFHBZSHGGEWLO-HWQSCIPKSA-N L-arabinofuranose Chemical compound OC[C@@H]1OC(O)[C@H](O)[C@H]1O HMFHBZSHGGEWLO-HWQSCIPKSA-N 0.000 claims description 5
- 125000003236 benzoyl group Chemical group [H]C1=C([H])C([H])=C(C([H])=C1[H])C(*)=O 0.000 claims description 5
- 239000003153 chemical reaction reagent Substances 0.000 claims description 5
- 235000019253 formic acid Nutrition 0.000 claims description 5
- 150000004678 hydrides Chemical class 0.000 claims description 5
- 229910000042 hydrogen bromide Inorganic materials 0.000 claims description 5
- 239000002253 acid Substances 0.000 claims description 4
- HOPRXXXSABQWAV-UHFFFAOYSA-N anhydrous collidine Natural products CC1=CC=NC(C)=C1C HOPRXXXSABQWAV-UHFFFAOYSA-N 0.000 claims description 4
- UTBIMNXEDGNJFE-UHFFFAOYSA-N collidine Natural products CC1=CC=C(C)C(C)=N1 UTBIMNXEDGNJFE-UHFFFAOYSA-N 0.000 claims description 4
- 238000010992 reflux Methods 0.000 claims description 4
- 239000012279 sodium borohydride Substances 0.000 claims description 4
- 229910000033 sodium borohydride Inorganic materials 0.000 claims description 4
- GFYHSKONPJXCDE-UHFFFAOYSA-N sym-collidine Natural products CC1=CN=C(C)C(C)=C1 GFYHSKONPJXCDE-UHFFFAOYSA-N 0.000 claims description 4
- 239000003638 chemical reducing agent Substances 0.000 claims description 3
- LSDPWZHWYPCBBB-UHFFFAOYSA-N methyl mercaptane Natural products SC LSDPWZHWYPCBBB-UHFFFAOYSA-N 0.000 claims description 3
- 150000007530 organic bases Chemical class 0.000 claims description 3
- 230000001590 oxidative effect Effects 0.000 claims description 3
- 150000003512 tertiary amines Chemical class 0.000 claims description 3
- 125000005425 toluyl group Chemical group 0.000 claims description 3
- 125000002221 trityl group Chemical group [H]C1=C([H])C([H])=C([H])C([H])=C1C([*])(C1=C(C(=C(C(=C1[H])[H])[H])[H])[H])C1=C([H])C([H])=C([H])C([H])=C1[H] 0.000 claims description 3
- 230000021736 acetylation Effects 0.000 claims description 2
- 238000006640 acetylation reaction Methods 0.000 claims description 2
- 150000005691 triesters Chemical class 0.000 claims description 2
- OAMLWJSTEGDKHJ-OTJWKRSZSA-N [(4S,5R)-2,3-dibenzoyl-2,4,5-trihydroxyoxan-3-yl]-phenylmethanone Chemical compound C(C1=CC=CC=C1)(=O)C1(C(O)(OC[C@H]([C@H]1O)O)C(C1=CC=CC=C1)=O)C(C1=CC=CC=C1)=O OAMLWJSTEGDKHJ-OTJWKRSZSA-N 0.000 claims 2
- SUVIGLJNEAMWEG-UHFFFAOYSA-N propane-1-thiol Chemical compound CCCS SUVIGLJNEAMWEG-UHFFFAOYSA-N 0.000 claims 2
- KXCAEQNNTZANTK-UHFFFAOYSA-N stannane Chemical compound [SnH4] KXCAEQNNTZANTK-UHFFFAOYSA-N 0.000 claims 2
- 229910000083 tin tetrahydride Inorganic materials 0.000 claims 2
- ZVQAVWAHRUNNPG-WISUUJSJSA-N (2S,4R,5S)-Tetrahydropyran-2,4,5-triol Chemical compound O[C@@H]1C[C@@H](O)[C@@H](O)CO1 ZVQAVWAHRUNNPG-WISUUJSJSA-N 0.000 claims 1
- FWEOQOXTVHGIFQ-UHFFFAOYSA-N 8-anilinonaphthalene-1-sulfonic acid Chemical class C=12C(S(=O)(=O)O)=CC=CC2=CC=CC=1NC1=CC=CC=C1 FWEOQOXTVHGIFQ-UHFFFAOYSA-N 0.000 claims 1
- VEXZGXHMUGYJMC-UHFFFAOYSA-N Hydrochloric acid Chemical compound Cl VEXZGXHMUGYJMC-UHFFFAOYSA-N 0.000 claims 1
- 238000006480 benzoylation reaction Methods 0.000 claims 1
- 125000001495 ethyl group Chemical group [H]C([H])([H])C([H])([H])* 0.000 claims 1
- IXCSERBJSXMMFS-UHFFFAOYSA-N hydrogen chloride Substances Cl.Cl IXCSERBJSXMMFS-UHFFFAOYSA-N 0.000 claims 1
- 229910000041 hydrogen chloride Inorganic materials 0.000 claims 1
- SRBFZHDQGSBBOR-SOOFDHNKSA-N D-ribopyranose Chemical compound O[C@@H]1COC(O)[C@H](O)[C@@H]1O SRBFZHDQGSBBOR-SOOFDHNKSA-N 0.000 abstract description 15
- 230000007062 hydrolysis Effects 0.000 abstract description 13
- 238000006460 hydrolysis reaction Methods 0.000 abstract description 13
- XXFXTBNFFMQVKJ-UHFFFAOYSA-N [diphenyl(trityloxy)methyl]benzene Chemical compound C=1C=CC=CC=1C(C=1C=CC=CC=1)(C=1C=CC=CC=1)OC(C=1C=CC=CC=1)(C=1C=CC=CC=1)C1=CC=CC=C1 XXFXTBNFFMQVKJ-UHFFFAOYSA-N 0.000 abstract description 4
- CIHZADLBBUAFTD-ZRBLBEILSA-N (2r,3r,4r)-2,3,4-trihydroxy-5-trityloxypentanal Chemical compound C=1C=CC=CC=1C(C=1C=CC=CC=1)(OC[C@@H](O)[C@@H](O)[C@@H](O)C=O)C1=CC=CC=C1 CIHZADLBBUAFTD-ZRBLBEILSA-N 0.000 abstract 2
- NPOKZMNZAPKSBT-ZRMNMSDTSA-N (3s,4r,5r)-2-bromooxane-3,4,5-triol Chemical compound O[C@@H]1COC(Br)[C@@H](O)[C@@H]1O NPOKZMNZAPKSBT-ZRMNMSDTSA-N 0.000 abstract 1
- QTBSBXVTEAMEQO-UHFFFAOYSA-M Acetate Chemical compound CC([O-])=O QTBSBXVTEAMEQO-UHFFFAOYSA-M 0.000 abstract 1
- 230000002194 synthesizing effect Effects 0.000 abstract 1
- YMWUJEATGCHHMB-UHFFFAOYSA-N Dichloromethane Chemical compound ClCCl YMWUJEATGCHHMB-UHFFFAOYSA-N 0.000 description 67
- YXFVVABEGXRONW-UHFFFAOYSA-N Toluene Chemical compound CC1=CC=CC=C1 YXFVVABEGXRONW-UHFFFAOYSA-N 0.000 description 45
- 239000000243 solution Substances 0.000 description 33
- HEDRZPFGACZZDS-MICDWDOJSA-N Trichloro(2H)methane Chemical compound [2H]C(Cl)(Cl)Cl HEDRZPFGACZZDS-MICDWDOJSA-N 0.000 description 31
- CSNNHWWHGAXBCP-UHFFFAOYSA-L Magnesium sulfate Chemical compound [Mg+2].[O-][S+2]([O-])([O-])[O-] CSNNHWWHGAXBCP-UHFFFAOYSA-L 0.000 description 24
- WFDIJRYMOXRFFG-UHFFFAOYSA-N Acetic anhydride Chemical compound CC(=O)OC(C)=O WFDIJRYMOXRFFG-UHFFFAOYSA-N 0.000 description 23
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 23
- VLKZOEOYAKHREP-UHFFFAOYSA-N n-Hexane Chemical class CCCCCC VLKZOEOYAKHREP-UHFFFAOYSA-N 0.000 description 22
- 238000005481 NMR spectroscopy Methods 0.000 description 20
- 238000006243 chemical reaction Methods 0.000 description 17
- XEKOWRVHYACXOJ-UHFFFAOYSA-N Ethyl acetate Chemical compound CCOC(C)=O XEKOWRVHYACXOJ-UHFFFAOYSA-N 0.000 description 15
- 229910052943 magnesium sulfate Inorganic materials 0.000 description 12
- 239000012267 brine Substances 0.000 description 11
- 239000010410 layer Substances 0.000 description 11
- 239000012044 organic layer Substances 0.000 description 11
- HPALAKNZSZLMCH-UHFFFAOYSA-M sodium;chloride;hydrate Chemical compound O.[Na+].[Cl-] HPALAKNZSZLMCH-UHFFFAOYSA-M 0.000 description 11
- 238000001644 13C nuclear magnetic resonance spectroscopy Methods 0.000 description 9
- WEVYAHXRMPXWCK-UHFFFAOYSA-N Acetonitrile Chemical compound CC#N WEVYAHXRMPXWCK-UHFFFAOYSA-N 0.000 description 9
- UHOVQNZJYSORNB-UHFFFAOYSA-N Benzene Chemical compound C1=CC=CC=C1 UHOVQNZJYSORNB-UHFFFAOYSA-N 0.000 description 9
- 238000001704 evaporation Methods 0.000 description 9
- 239000000047 product Substances 0.000 description 9
- 239000011541 reaction mixture Substances 0.000 description 9
- UIIMBOGNXHQVGW-UHFFFAOYSA-M Sodium bicarbonate Chemical class [Na+].OC([O-])=O UIIMBOGNXHQVGW-UHFFFAOYSA-M 0.000 description 8
- 229960000583 acetic acid Drugs 0.000 description 8
- 238000003818 flash chromatography Methods 0.000 description 8
- 238000001953 recrystallisation Methods 0.000 description 8
- 230000008020 evaporation Effects 0.000 description 7
- HEDRZPFGACZZDS-UHFFFAOYSA-N Chloroform Chemical compound ClC(Cl)Cl HEDRZPFGACZZDS-UHFFFAOYSA-N 0.000 description 6
- ZAZZFZLLPGMINF-UHFFFAOYSA-N 5-(trityloxymethyl)oxolane-2,3,4-triol Chemical compound OC1C(O)C(O)OC1COC(C=1C=CC=CC=1)(C=1C=CC=CC=1)C1=CC=CC=C1 ZAZZFZLLPGMINF-UHFFFAOYSA-N 0.000 description 5
- VYPSYNLAJGMNEJ-UHFFFAOYSA-N Silicium dioxide Chemical compound O=[Si]=O VYPSYNLAJGMNEJ-UHFFFAOYSA-N 0.000 description 5
- PASDCCFISLVPSO-UHFFFAOYSA-N benzoyl chloride Chemical compound ClC(=O)C1=CC=CC=C1 PASDCCFISLVPSO-UHFFFAOYSA-N 0.000 description 5
- 150000001720 carbohydrates Chemical class 0.000 description 5
- 235000014633 carbohydrates Nutrition 0.000 description 5
- 229940093499 ethyl acetate Drugs 0.000 description 5
- 235000019439 ethyl acetate Nutrition 0.000 description 5
- QAOWNCQODCNURD-UHFFFAOYSA-N sulfuric acid Substances OS(O)(=O)=O QAOWNCQODCNURD-UHFFFAOYSA-N 0.000 description 5
- ASJSAQIRZKANQN-CRCLSJGQSA-N 2-deoxy-D-ribose Chemical compound OC[C@@H](O)[C@@H](O)CC=O ASJSAQIRZKANQN-CRCLSJGQSA-N 0.000 description 4
- XKRFYHLGVUSROY-UHFFFAOYSA-N Argon Chemical compound [Ar] XKRFYHLGVUSROY-UHFFFAOYSA-N 0.000 description 4
- CPELXLSAUQHCOX-UHFFFAOYSA-M Bromide Chemical compound [Br-] CPELXLSAUQHCOX-UHFFFAOYSA-M 0.000 description 4
- OKTJSMMVPCPJKN-UHFFFAOYSA-N Carbon Chemical compound [C] OKTJSMMVPCPJKN-UHFFFAOYSA-N 0.000 description 4
- OFBQJSOFQDEBGM-UHFFFAOYSA-N Pentane Chemical compound CCCCC OFBQJSOFQDEBGM-UHFFFAOYSA-N 0.000 description 4
- 125000002777 acetyl group Chemical group [H]C([H])([H])C(*)=O 0.000 description 4
- 238000007792 addition Methods 0.000 description 4
- 229910052799 carbon Inorganic materials 0.000 description 4
- 150000001875 compounds Chemical class 0.000 description 4
- 239000012043 crude product Substances 0.000 description 4
- 239000000126 substance Substances 0.000 description 4
- 235000000346 sugar Nutrition 0.000 description 4
- 238000004809 thin layer chromatography Methods 0.000 description 4
- JBWKIWSBJXDJDT-UHFFFAOYSA-N triphenylmethyl chloride Chemical compound C=1C=CC=CC=1C(C=1C=CC=CC=1)(Cl)C1=CC=CC=C1 JBWKIWSBJXDJDT-UHFFFAOYSA-N 0.000 description 4
- GPZXFICWCMCQPF-UHFFFAOYSA-N 2-methylbenzoyl chloride Chemical compound CC1=CC=CC=C1C(Cl)=O GPZXFICWCMCQPF-UHFFFAOYSA-N 0.000 description 3
- VEXZGXHMUGYJMC-UHFFFAOYSA-M Chloride anion Chemical compound [Cl-] VEXZGXHMUGYJMC-UHFFFAOYSA-M 0.000 description 3
- RABHEDIJTIQZRI-ODYACQGXSA-N [(2R,3R,4R)-3,4-dibenzoyloxy-5-phenylselanyloxolan-2-yl]methyl benzoate Chemical compound O=C(OC[C@H]1OC([Se]c2ccccc2)[C@H](OC(=O)c2ccccc2)[C@@H]1OC(=O)c1ccccc1)c1ccccc1 RABHEDIJTIQZRI-ODYACQGXSA-N 0.000 description 3
- WNYGTPGDKDGNIK-YPKYBTACSA-N [(2s,3r,4r)-2,3,4-triacetyloxy-5-trityloxypentyl] acetate Chemical compound C=1C=CC=CC=1C(C=1C=CC=CC=1)(OC[C@H]([C@@H](OC(C)=O)[C@@H](OC(C)=O)COC(=O)C)OC(C)=O)C1=CC=CC=C1 WNYGTPGDKDGNIK-YPKYBTACSA-N 0.000 description 3
- 125000004122 cyclic group Chemical group 0.000 description 3
- 238000001035 drying Methods 0.000 description 3
- LYGJENNIWJXYER-UHFFFAOYSA-N nitromethane Chemical compound C[N+]([O-])=O LYGJENNIWJXYER-UHFFFAOYSA-N 0.000 description 3
- 239000002777 nucleoside Substances 0.000 description 3
- 150000003254 radicals Chemical class 0.000 description 3
- 239000000741 silica gel Substances 0.000 description 3
- 229910002027 silica gel Inorganic materials 0.000 description 3
- 239000002002 slurry Substances 0.000 description 3
- NALRCAPFICWVAQ-NNXAEHONSA-N (2s,3r,4s)-2-(hydroxymethyl)-5-methoxyoxolane-3,4-diol Chemical compound COC1O[C@@H](CO)[C@H](O)[C@@H]1O NALRCAPFICWVAQ-NNXAEHONSA-N 0.000 description 2
- HIGPHXFCCWPQCN-ZRBLBEILSA-N (2s,3s,4r)-5-trityloxypentane-1,2,3,4-tetrol Chemical compound C=1C=CC=CC=1C(C=1C=CC=CC=1)(OC[C@@H](O)[C@@H](O)[C@@H](O)CO)C1=CC=CC=C1 HIGPHXFCCWPQCN-ZRBLBEILSA-N 0.000 description 2
- 239000004342 Benzoyl peroxide Substances 0.000 description 2
- OMPJBNCRMGITSC-UHFFFAOYSA-N Benzoylperoxide Chemical compound C=1C=CC=CC=1C(=O)OOC(=O)C1=CC=CC=C1 OMPJBNCRMGITSC-UHFFFAOYSA-N 0.000 description 2
- KZMGYPLQYOPHEL-UHFFFAOYSA-N Boron trifluoride etherate Chemical compound FB(F)F.CCOCC KZMGYPLQYOPHEL-UHFFFAOYSA-N 0.000 description 2
- IAZDPXIOMUYVGZ-WFGJKAKNSA-N Dimethyl sulfoxide Chemical compound [2H]C([2H])([2H])S(=O)C([2H])([2H])[2H] IAZDPXIOMUYVGZ-WFGJKAKNSA-N 0.000 description 2
- 238000005684 Liebig rearrangement reaction Methods 0.000 description 2
- WYURNTSHIVDZCO-UHFFFAOYSA-N Tetrahydrofuran Chemical compound C1CCOC1 WYURNTSHIVDZCO-UHFFFAOYSA-N 0.000 description 2
- ZYPMNZKYVVSXOJ-FRRDWIJNSA-N [(2s,3s,4s)-2,3,4-triacetyloxy-5-oxopentyl] acetate Chemical compound CC(=O)OC[C@H](OC(C)=O)[C@H](OC(C)=O)[C@H](OC(C)=O)C=O ZYPMNZKYVVSXOJ-FRRDWIJNSA-N 0.000 description 2
- MJOQJPYNENPSSS-PFGBXZAXSA-N [(3r,4r,5r)-4,5,6-triacetyloxyoxan-3-yl] acetate Chemical compound CC(=O)O[C@@H]1COC(OC(C)=O)[C@H](OC(C)=O)[C@@H]1OC(C)=O MJOQJPYNENPSSS-PFGBXZAXSA-N 0.000 description 2
- WETWJCDKMRHUPV-UHFFFAOYSA-N acetyl chloride Chemical compound CC(Cl)=O WETWJCDKMRHUPV-UHFFFAOYSA-N 0.000 description 2
- 239000012346 acetyl chloride Substances 0.000 description 2
- 125000002015 acyclic group Chemical group 0.000 description 2
- PYMYPHUHKUWMLA-VAYJURFESA-N aldehydo-L-arabinose Chemical compound OC[C@H](O)[C@H](O)[C@@H](O)C=O PYMYPHUHKUWMLA-VAYJURFESA-N 0.000 description 2
- 238000013459 approach Methods 0.000 description 2
- PYMYPHUHKUWMLA-WDCZJNDASA-N arabinose Chemical compound OC[C@@H](O)[C@@H](O)[C@H](O)C=O PYMYPHUHKUWMLA-WDCZJNDASA-N 0.000 description 2
- 229910052786 argon Inorganic materials 0.000 description 2
- 235000019400 benzoyl peroxide Nutrition 0.000 description 2
- SRBFZHDQGSBBOR-TXICZTDVSA-N beta-D-ribopyranose Chemical compound O[C@@H]1CO[C@@H](O)[C@H](O)[C@@H]1O SRBFZHDQGSBBOR-TXICZTDVSA-N 0.000 description 2
- SRBFZHDQGSBBOR-FCAWWPLPSA-N beta-L-ribopyranose Chemical compound O[C@H]1CO[C@H](O)[C@@H](O)[C@H]1O SRBFZHDQGSBBOR-FCAWWPLPSA-N 0.000 description 2
- 238000005660 chlorination reaction Methods 0.000 description 2
- 238000010549 co-Evaporation Methods 0.000 description 2
- 150000002243 furanoses Chemical class 0.000 description 2
- 150000004820 halides Chemical class 0.000 description 2
- 239000000463 material Substances 0.000 description 2
- HEBKCHPVOIAQTA-UHFFFAOYSA-N meso ribitol Natural products OCC(O)C(O)C(O)CO HEBKCHPVOIAQTA-UHFFFAOYSA-N 0.000 description 2
- OKKJLVBELUTLKV-VMNATFBRSA-N methanol-d1 Chemical compound [2H]OC OKKJLVBELUTLKV-VMNATFBRSA-N 0.000 description 2
- 125000003835 nucleoside group Chemical group 0.000 description 2
- 230000003287 optical effect Effects 0.000 description 2
- 230000003647 oxidation Effects 0.000 description 2
- 238000007254 oxidation reaction Methods 0.000 description 2
- ZRSNZINYAWTAHE-UHFFFAOYSA-N p-methoxybenzaldehyde Chemical compound COC1=CC=C(C=O)C=C1 ZRSNZINYAWTAHE-UHFFFAOYSA-N 0.000 description 2
- HEBKCHPVOIAQTA-ZXFHETKHSA-N ribitol Chemical compound OC[C@H](O)[C@H](O)[C@H](O)CO HEBKCHPVOIAQTA-ZXFHETKHSA-N 0.000 description 2
- 229910000030 sodium bicarbonate Inorganic materials 0.000 description 2
- 235000017557 sodium bicarbonate Nutrition 0.000 description 2
- 239000007787 solid Substances 0.000 description 2
- 150000008163 sugars Chemical class 0.000 description 2
- 239000006188 syrup Substances 0.000 description 2
- 235000020357 syrup Nutrition 0.000 description 2
- 238000005406 washing Methods 0.000 description 2
- UERNRFHISLXQFU-DFWYDOINSA-N (2S)-5-oxopyrrolidine-2-carboxylic acid pyridine Chemical compound c1ccncc1.OC(=O)[C@@H]1CCC(=O)N1 UERNRFHISLXQFU-DFWYDOINSA-N 0.000 description 1
- NPOKZMNZAPKSBT-MBMOQRBOSA-N (2r,3s,4r,5r)-2-bromooxane-3,4,5-triol Chemical compound O[C@@H]1CO[C@H](Br)[C@@H](O)[C@@H]1O NPOKZMNZAPKSBT-MBMOQRBOSA-N 0.000 description 1
- WSLDOOZREJYCGB-UHFFFAOYSA-N 1,2-Dichloroethane Chemical compound ClCCCl WSLDOOZREJYCGB-UHFFFAOYSA-N 0.000 description 1
- QBEIABZPRBJOFU-CAHLUQPWSA-N 4-amino-5-fluoro-1-[(2r,5s)-5-(hydroxymethyl)oxolan-2-yl]pyrimidin-2-one Chemical compound C1=C(F)C(N)=NC(=O)N1[C@@H]1O[C@H](CO)CC1 QBEIABZPRBJOFU-CAHLUQPWSA-N 0.000 description 1
- BAWRQSYFRBPSPK-VDTYLAMSSA-N 4-amino-5-fluoro-1-[(2s,5r)-5-(hydroxymethyl)thiolan-2-yl]pyrimidin-2-one Chemical compound C1=C(F)C(N)=NC(=O)N1[C@H]1S[C@@H](CO)CC1 BAWRQSYFRBPSPK-VDTYLAMSSA-N 0.000 description 1
- XVMSFILGAMDHEY-UHFFFAOYSA-N 6-(4-aminophenyl)sulfonylpyridin-3-amine Chemical compound C1=CC(N)=CC=C1S(=O)(=O)C1=CC=C(N)C=N1 XVMSFILGAMDHEY-UHFFFAOYSA-N 0.000 description 1
- 229910015900 BF3 Inorganic materials 0.000 description 1
- 150000001100 L-ribose derivatives Chemical class 0.000 description 1
- 108091034117 Oligonucleotide Proteins 0.000 description 1
- ATJFFYVFTNAWJD-UHFFFAOYSA-N Tin Chemical group [Sn] ATJFFYVFTNAWJD-UHFFFAOYSA-N 0.000 description 1
- WREGKURFCTUGRC-POYBYMJQSA-N Zalcitabine Chemical compound O=C1N=C(N)C=CN1[C@@H]1O[C@H](CO)CC1 WREGKURFCTUGRC-POYBYMJQSA-N 0.000 description 1
- NNOGORHXCSHEKM-LHJLODMPSA-N [(2R,3S)-3,5-bis[(2-methylbenzoyl)oxy]oxolan-2-yl]methyl 2-methylbenzoate Chemical compound C=1(C(=CC=CC=1)C(=O)OC1C[C@H](OC(=O)C=2C(=CC=CC=2)C)[C@H](O1)COC(=O)C=1C(=CC=CC=1)C)C NNOGORHXCSHEKM-LHJLODMPSA-N 0.000 description 1
- OBHMDUHODIMVPL-MHYDHLEJSA-N [(2r,3s,4s)-5-chloro-4-hydroxy-3-(2-methylbenzoyl)oxyoxolan-2-yl]methyl 2-methylbenzoate Chemical compound CC1=CC=CC=C1C(=O)OC[C@@H]1[C@@H](OC(=O)C=2C(=CC=CC=2)C)[C@H](O)C(Cl)O1 OBHMDUHODIMVPL-MHYDHLEJSA-N 0.000 description 1
- MJOQJPYNENPSSS-TXRDPFJMSA-N [(3s,4s,5s)-4,5,6-triacetyloxyoxan-3-yl] acetate Chemical compound CC(=O)O[C@H]1COC(OC(C)=O)[C@@H](OC(C)=O)[C@H]1OC(C)=O MJOQJPYNENPSSS-TXRDPFJMSA-N 0.000 description 1
- YBCVMFKXIKNREZ-UHFFFAOYSA-N acoh acetic acid Chemical compound CC(O)=O.CC(O)=O YBCVMFKXIKNREZ-UHFFFAOYSA-N 0.000 description 1
- 230000004913 activation Effects 0.000 description 1
- 150000001298 alcohols Chemical class 0.000 description 1
- HMFHBZSHGGEWLO-AIHAYLRMSA-N alpha-D-ribose Chemical compound OC[C@H]1O[C@H](O)[C@H](O)[C@@H]1O HMFHBZSHGGEWLO-AIHAYLRMSA-N 0.000 description 1
- 150000008064 anhydrides Chemical class 0.000 description 1
- 150000001450 anions Chemical class 0.000 description 1
- 230000000840 anti-viral effect Effects 0.000 description 1
- 239000000074 antisense oligonucleotide Substances 0.000 description 1
- 238000012230 antisense oligonucleotides Methods 0.000 description 1
- 239000003443 antiviral agent Substances 0.000 description 1
- SMDHCQAYESWHAE-UHFFFAOYSA-N benfluralin Chemical compound CCCCN(CC)C1=C([N+]([O-])=O)C=C(C(F)(F)F)C=C1[N+]([O-])=O SMDHCQAYESWHAE-UHFFFAOYSA-N 0.000 description 1
- WDODWFPDZYSKIA-UHFFFAOYSA-N benzeneselenol Chemical compound [SeH]C1=CC=CC=C1 WDODWFPDZYSKIA-UHFFFAOYSA-N 0.000 description 1
- 239000012965 benzophenone Substances 0.000 description 1
- AQIHMSVIAGNIDM-UHFFFAOYSA-N benzoyl bromide Chemical compound BrC(=O)C1=CC=CC=C1 AQIHMSVIAGNIDM-UHFFFAOYSA-N 0.000 description 1
- HMFHBZSHGGEWLO-TXICZTDVSA-N beta-D-ribose Chemical compound OC[C@H]1O[C@@H](O)[C@H](O)[C@@H]1O HMFHBZSHGGEWLO-TXICZTDVSA-N 0.000 description 1
- 230000031709 bromination Effects 0.000 description 1
- 238000005893 bromination reaction Methods 0.000 description 1
- 229910052985 chalcogen hydride Inorganic materials 0.000 description 1
- 239000003795 chemical substances by application Substances 0.000 description 1
- 229910052681 coesite Inorganic materials 0.000 description 1
- 238000001816 cooling Methods 0.000 description 1
- 229910052906 cristobalite Inorganic materials 0.000 description 1
- 239000013058 crude material Substances 0.000 description 1
- 239000013078 crystal Substances 0.000 description 1
- IJKVHSBPTUYDLN-UHFFFAOYSA-N dihydroxy(oxo)silane Chemical compound O[Si](O)=O IJKVHSBPTUYDLN-UHFFFAOYSA-N 0.000 description 1
- CETRZFQIITUQQL-UHFFFAOYSA-N dmso dimethylsulfoxide Chemical compound CS(C)=O.CS(C)=O CETRZFQIITUQQL-UHFFFAOYSA-N 0.000 description 1
- 230000000694 effects Effects 0.000 description 1
- 238000010828 elution Methods 0.000 description 1
- 125000004185 ester group Chemical group 0.000 description 1
- OLAMWIPURJGSKE-UHFFFAOYSA-N et2o diethylether Chemical compound CCOCC.CCOCC OLAMWIPURJGSKE-UHFFFAOYSA-N 0.000 description 1
- LHWWETDBWVTKJO-UHFFFAOYSA-N et3n triethylamine Chemical compound CCN(CC)CC.CCN(CC)CC LHWWETDBWVTKJO-UHFFFAOYSA-N 0.000 description 1
- OCLXJTCGWSSVOE-UHFFFAOYSA-N ethanol etoh Chemical compound CCO.CCO OCLXJTCGWSSVOE-UHFFFAOYSA-N 0.000 description 1
- 238000000605 extraction Methods 0.000 description 1
- 239000000499 gel Substances 0.000 description 1
- 239000012362 glacial acetic acid Substances 0.000 description 1
- 230000036541 health Effects 0.000 description 1
- 238000010438 heat treatment Methods 0.000 description 1
- 239000005457 ice water Substances 0.000 description 1
- 238000005342 ion exchange Methods 0.000 description 1
- COTNUBDHGSIOTA-UHFFFAOYSA-N meoh methanol Chemical compound OC.OC COTNUBDHGSIOTA-UHFFFAOYSA-N 0.000 description 1
- 230000004048 modification Effects 0.000 description 1
- 238000012986 modification Methods 0.000 description 1
- 239000002808 molecular sieve Substances 0.000 description 1
- SYSQUGFVNFXIIT-UHFFFAOYSA-N n-[4-(1,3-benzoxazol-2-yl)phenyl]-4-nitrobenzenesulfonamide Chemical class C1=CC([N+](=O)[O-])=CC=C1S(=O)(=O)NC1=CC=C(C=2OC3=CC=CC=C3N=2)C=C1 SYSQUGFVNFXIIT-UHFFFAOYSA-N 0.000 description 1
- 230000007935 neutral effect Effects 0.000 description 1
- 238000000655 nuclear magnetic resonance spectrum Methods 0.000 description 1
- 239000008188 pellet Substances 0.000 description 1
- 125000001997 phenyl group Chemical group [H]C1=C([H])C([H])=C(*)C([H])=C1[H] 0.000 description 1
- 239000002798 polar solvent Substances 0.000 description 1
- 229920001467 poly(styrenesulfonates) Polymers 0.000 description 1
- 229920005862 polyol Polymers 0.000 description 1
- 150000003077 polyols Chemical class 0.000 description 1
- 125000006239 protecting group Chemical group 0.000 description 1
- 238000000425 proton nuclear magnetic resonance spectrum Methods 0.000 description 1
- 150000003215 pyranoses Chemical class 0.000 description 1
- 238000010791 quenching Methods 0.000 description 1
- 239000000376 reactant Substances 0.000 description 1
- 230000009467 reduction Effects 0.000 description 1
- 238000011160 research Methods 0.000 description 1
- 238000002390 rotary evaporation Methods 0.000 description 1
- 238000000926 separation method Methods 0.000 description 1
- 239000000377 silicon dioxide Substances 0.000 description 1
- URGAHOPLAPQHLN-UHFFFAOYSA-N sodium aluminosilicate Chemical compound [Na+].[Al+3].[O-][Si]([O-])=O.[O-][Si]([O-])=O URGAHOPLAPQHLN-UHFFFAOYSA-N 0.000 description 1
- 238000010561 standard procedure Methods 0.000 description 1
- 238000003756 stirring Methods 0.000 description 1
- 229910052682 stishovite Inorganic materials 0.000 description 1
- HIFJUMGIHIZEPX-UHFFFAOYSA-N sulfuric acid;sulfur trioxide Chemical compound O=S(=O)=O.OS(O)(=O)=O HIFJUMGIHIZEPX-UHFFFAOYSA-N 0.000 description 1
- 229920002994 synthetic fiber Polymers 0.000 description 1
- CZDYPVPMEAXLPK-UHFFFAOYSA-N tetramethylsilane Chemical compound C[Si](C)(C)C CZDYPVPMEAXLPK-UHFFFAOYSA-N 0.000 description 1
- 238000002560 therapeutic procedure Methods 0.000 description 1
- 230000001988 toxicity Effects 0.000 description 1
- 231100000419 toxicity Toxicity 0.000 description 1
- 238000012546 transfer Methods 0.000 description 1
- 229910052905 tridymite Inorganic materials 0.000 description 1
- LZTRCELOJRDYMQ-UHFFFAOYSA-N triphenylmethanol Chemical compound C=1C=CC=CC=1C(C=1C=CC=CC=1)(O)C1=CC=CC=C1 LZTRCELOJRDYMQ-UHFFFAOYSA-N 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
- C07H3/00—Compounds containing only hydrogen atoms and saccharide radicals having only carbon, hydrogen, and oxygen atoms
- C07H3/02—Monosaccharides
Definitions
- This invention relates generally to carbohydrate synthesis and, more particularly, to the synthesis of L-ribose and a 2-deoxy derivative.
- L-carbohydrates and their derived nucleosides in medicinal applications has greatly increased.
- modified nucleosides derived from L-sugars e.g., L-5-fluoro-2', 3'-dideoxycytidine and L-2', 3'-dideoxycytidine (L-5FddC and L-ddC)
- L-5FddC and L-ddC L-5FddC and L-ddC
- antisense oligonucleotide therapy approaches utilize L-nucleosides, either normal L-RNA or 2'-deoxy L-DNA as materials to bind pieces of D-RNA.
- L-ribose is the enantiomer of D-ribose, which occurs naturally.
- Several syntheses of L-ribose are known. The most direct synthetic methodology currently available begins with L-arabinose and proceeds in about 30% yield after a difficult separation from unreacted L- arabinose and other carbohydrates. Because L-sugars offer tremendous potential in many medicinal applications, a need exists for an improved synthesis of L-ribose and its derivatives.
- the present invention provides a unique synthetic route for making L-ribose (1) and its derivatives, beginning with the natural enantiomer, D-ribose (2).
- the two sugars differ only in their respective groups at Cl and C5, with C2, C3 and C4 being identical.
- the overall route provided by the invention is the conversion of (2) into (1), as shown in the following scheme, where the sugars are drawn in their cyclic, ribofuranose configurations:
- the present invention provides a method for converting inexpensive, naturally occurring D-ribose into L-ribose, by interconverting the hydroxy group at Cl and the hydroxymethyl group at C5.
- this proceeds by oxidizing the hydroxymethyl group at C5 to an aldehyde, and reducing the pseudo-aldehyde at Cl (obscured in the ribofuranose configuration) to a hydroxymethyl group.
- the L-ribose thus formed is dehydroxylated at C2 to obtain 2-deoxy L-ribose.
- L-Ribose is prepared from D-ribose by (a) forming a hydroxy-protected D-ribose; (b) reducing the hydroxy-protected D-ribose to a protected tetrol; (c) converting the tetrol to a tetraester, such as a tetraacetate; (d) hydrolyzing the protecting group to form a hydroxymethyl tetraester; (e) oxidizing the hydroxymethyl group to form a tetraester aldehyde; and (f) hydrolysing the ester groups to yield L-ribose.
- 2-deoxy-L-ribose is prepared by an extension of the approach described above. More particularly, L-ribose is methylated to form a methyl riboside, which is then perbenzoylated and anomerically acetylated, yielding a tetraester in essentially quantitative yield over the three operations. The tetraester is converted (at Cl) to a ⁇ -selenophenyl ribofuranoside by treatment with phenylselenol and acid.
- Refluxing a solution of the ⁇ -selenophenyl ribofuranoside with an organotin compound (e.g., tributylstannane) and an initiator agent (e.g., AIBN ) yields a tribenzoyl 2-deoxy-L- ribofuranoside, which is easily converted to 2-deoxy L-ribose by basic hydrolysis.
- organotin compound e.g., tributylstannane
- AIBN initiator agent
- L-arabinose is converted to 2-deoxy L-ribose. More particularly, perbenzoylation of L-arabinose followed by treatment with hydrogen bromide yields two isomers — a pyranosyl bromide and a furanosyl bromide, which are separated by column chromatography.
- the pyranosyl bromide is reductively rearranged under Giese conditions, forming a perbenzoate of desired configuration, which is readily hydrolyzed to 2- deoxy L-ribose.
- L-arabinose is converted to L-2- deoxyribose by an alternate route.
- TrCl trityl chloride (triphenylmethyl chloride) pyr pyridine
- D-ribose dissolves in water to form an equilibrium mixture of several species: a— and jS-D-ribofuranose D-ribose a— and j8-D-ribopyranose
- the ⁇ -and ⁇ -D-ribofuranose species are the predominant species in solution.
- D-ribose and L-ribose is used herein to denote both cyclic and acyclic species of the given sugar, unless a particular context indicates otherwise.
- D-ribose is efficiently converted into L- ribose by interconversion of the two end groups of D-ribose ⁇ the hydroxy group at Cl and the hydroxymethyl group at C5.
- the inter-conversion is accomplished via Synthetic Scheme 1.
- a 7:3 volume ratio of formic acid:diethyl ether was used.
- the alcohol (6) was isolated without any problems due to acetyl transfer. Several methods for oxidation of the hydroxy-methyl group to aldehyde were studied, but Swern oxidation turned out to give the highest yields. Addition of the alcohol (6) to a mixture of DMSO and trifluoroacetic anhydride (TFAA) in dichloromethane or other suitable solvent, followed by addition of a tertiary amine, such as Et 3 N, at low temperature, (e.g.
- TFAA trifluoroacetic anhydride
- L-ribose (1) itself was prepared in 95% yield by basic hydrolysis of (7) using, e.g., K 2 CO 3 in EtOH. The steps of hydrolyzing the tritylether, Swern oxidation, and hydrolysis of the tetraacetate to yield L-ribose are all believed to occur with the open form of the sugar.
- L-ribose (1) In order to prove the structure of the L-ribose (1), we carried out its peracetylation to give the L-ribopyranose tetraacetate (8) in 84% overall yield from the aldehyde (7) (See H. Zinner, Chem. Ber. 86, 817 (1953). A rotation of -55.4° was reported for D-ribopyranose tetraacetate.) The optical rotation of (8) (+55.2°) matched that of D-ribopyranose tetraacetate but had the opposite sign, thus proving the structure and chirality of our synthetic material. Proton and carbon NMR for the compounds were consistent with the assigned structures. Thus, L-ribose (1) is available from D-ribose (2) in six steps in 39% overall yield.
- 2-Deoxy L-ribose is prepared from L-ribose by an extension of the above-described route, depicted below in Scheme 2.
- a mercaptan such as phenyl mercaptan, or some other organo-chalcogen hydride or halide can be used, yeilding a ⁇ -substituted ribofuranoside.
- the method of Giese (Giese, B., et al., Liebigs Ann. Chem.. 615 (1988)) was used to prepare the desired 2-deoxy carbohydrate. In general terms, this entailed refluxing (10) with a reducing agent and a free radical initiator, such as AIBN, benzoyl peroxide, or an azo initiator.
- L-Arabinoise is converted to L-2-deoxyribose by an alternate route, according to Scheme 4:
- F could be converted in one step and high yield into the crystalline ⁇ -anomer of the 3,5-bis-O-toluoylarabinofuranosyl chloride H, a known compound that has been taken on to the L-2'-deoxynucleosides by reaction with the anions of the appropriate bases.
- the chloride H can then be used to prepare ⁇ -nucleosides by known methods. (See e.g., Fujimori, S.; Iwanami, N.; Hashimoto, Y.; and Shudo, K. Nucleosides & Nucleotides 1992, 11,341.)
- the resulting slurry was taken up in water and extensively extracted with dichloromethane. The combined organic layers were shaken with brine, dried over MgSO 4 , and the solvents removed in vacuo. The product was then purified by successive recrystallization from ethanol or recrystallization after a silica gel column to remove trityl alcohol to give the monotrityl ribose (3) (12.6 g, 60.2% yield).
- 5-O-Trityl-D-ribitol (4) 5-O-Trityl-D-ribose (3) (12.6 g, 32 mmol) was dissolved in 25 mL of absolute ethanol and 100 mL of dry dichloromethane. To this solution was added 1.21 g (32 mmol) of NaBH 4 and the reaction mixture was stirred for 1 h at 25 °C. Another 1.21 g of
- the peracetate (5) can be purified by flash column chromatography (ethyl acetate/hexanes) to give 15.3 g (85% from 3).
- the temperature of the solution was carefully maintained below -70 °C during the additions.
- the reaction mixture was stirred for 5 min at -78 °C and then allowed to warm up to 25 °C briefly. It was then cooled again to -78 °C and 2.87 mL of triethylamine was added dropwise. After stirring for 15 min. at -78 °C, the reaction mixture was warmed up to 25 °C and quenched with water.
- L-Ribose (2) L-Ribose, 2,3,4,5-tetraacetate (7) (71 mg, 0.223 mmol) was stirred with potassium carbonate (138 mg, 1.00 mmol) in 4 mL of ethanol and 1 drop (33 mg, 1.83 mmol) of water. After 4 h, the reaction was complete (by TLC). The potassium carbonate was filtered off and the ethanol was removed in vacuo to give L-ribose (1) (32 mg, 95%, 84% from 6). For proof of structure, the L-ribose was characterized as its pyranosyl tetraacetate (8).
- Methyl L-ribofuranoside Five drops of fuming sulfuric acid was added to a solution of L- ribose (1) (30 mg, 0.2 mmol) in 10 mL of anhydrous methanol. The mixture was stored in a refrigerator for 24 h, and TLC indicated completion of the reaction. The reaction mixture was then passed through a strongly basic Dowex ion-exchange column, and the column was thoroughly rinsed with more methanol. Rotary evaporation and co-evaporation with toluene gave crude product (33 mg, 0.2 mmol, 100%) that was directly used in the next reaction.
- Methyl 2,3,5-tri-O-benzoyl- ⁇ -L-ribofuranoside A solution of methyl L-ribofuranoside (33 mg, 0.2 mmol) and 0.15 mg of benzoyl chloride in 2 mL of pyridine was left at 25°C overnight. The reaction was then quenched with 20 mL of water. The mixture was extracted three times with chloroform. The combined chloroform layer was rinsed with water and brine, dried over MgSO 4 , and the solvent removed in vacuo. Co-evaporation with toluene afforded the product (100 mg, 0.2 mmol, 100%) as a syrup which was used in the next reaction directly.
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- Chemical & Material Sciences (AREA)
- Organic Chemistry (AREA)
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Engineering & Computer Science (AREA)
- Biochemistry (AREA)
- Biotechnology (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Molecular Biology (AREA)
- Saccharide Compounds (AREA)
Abstract
Description
Claims
Priority Applications (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
AU66866/98A AU6686698A (en) | 1997-03-05 | 1998-03-05 | Synthesis of l-ribose and 2-deoxy l-ribose |
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US4027097P | 1997-03-05 | 1997-03-05 | |
US60/040,270 | 1997-03-05 |
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WO1998039347A2 true WO1998039347A2 (en) | 1998-09-11 |
WO1998039347A3 WO1998039347A3 (en) | 1998-10-22 |
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ID=21910078
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PCT/US1998/004302 WO1998039347A2 (en) | 1997-03-05 | 1998-03-05 | Synthesis of l-ribose and 2-deoxy l-ribose |
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AU (1) | AU6686698A (en) |
WO (1) | WO1998039347A2 (en) |
Cited By (11)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2004007513A1 (en) * | 2002-07-15 | 2004-01-22 | Samchully Pharm. Co., Ltd. | Method for producing 2-deoxy-l-ribose |
KR100426030B1 (en) * | 2000-07-22 | 2004-04-03 | (주) 한켐 | Chirality conversion method in lactone sugar compounds |
KR100433179B1 (en) * | 2001-11-10 | 2004-05-27 | 주식회사 삼천리제약 | Method for Producing 2-Deoxy-L-ribose |
KR100440461B1 (en) * | 2000-08-19 | 2004-07-15 | (주) 한켐 | Process for the preparation of L-ribose using 1,4-lactone |
KR100449310B1 (en) * | 2001-11-08 | 2004-09-18 | 주식회사 삼천리제약 | preparation method of 2-deoxy-L-ribose |
JP2006232861A (en) * | 2000-11-29 | 2006-09-07 | Mitsui Chemicals Inc | L-nucleic acid derivative and process for synthesis thereof |
CN102108089A (en) * | 2009-12-29 | 2011-06-29 | 唐传生物科技(厦门)有限公司 | Preparation method of 2-deoxy-L-ribose |
CN102153600A (en) * | 2010-02-12 | 2011-08-17 | 何遂庆 | Method for preparing 2-deoxidation-L-ribose |
US8114987B2 (en) | 2006-12-06 | 2012-02-14 | Samchully Pharm. Co. Ltd. | Preparation method of 2-deoxy-L-ribose |
NL2007240C2 (en) * | 2011-08-09 | 2013-02-12 | Konink Co Peratie Cosun U A | Sugar-based plasticizers. |
CN107778334A (en) * | 2016-08-26 | 2018-03-09 | 康普药业股份有限公司 | A kind of preparation method of Sebivo key intermediate |
-
1998
- 1998-03-05 WO PCT/US1998/004302 patent/WO1998039347A2/en active Application Filing
- 1998-03-05 AU AU66866/98A patent/AU6686698A/en not_active Abandoned
Non-Patent Citations (4)
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CHEMICAL ABSTRACTS, vol. 108, no. 19, 9 May 1988 Columbus, Ohio, US; abstract no. 167793w, R.A.GAKHOKIDZE ET AL.: "Synthesis of 2-Deoxyribose." page 684; column 2; XP002066660 & ZH. ORG. KHIM., vol. 23, no. 5, 1987, pages 1126-1127, * |
CHEMICAL ABSTRACTS, vol. 119, no. 25, 20 December 1993 Columbus, Ohio, US; abstract no. 271608c, J.KUBALA ET AL.: "Method of Preparing Optically Active 2-Deoxy-L-Ribose." page 1049; column 1; XP002066659 & CS 274 394 A * |
CHEMICAL ABSTRACTS, vol. 122, no. 5, 30 January 1995 Columbus, Ohio, US; abstract no. 56398r, J.KUBALA ET AL.: "Process for Preparing L-Ribose." page 1231; column 2; XP002066661 & CS 275 890 A * |
M.E.JUNG ET AL.: "Efficient Synthesis of L-Ribose and 2-Deoxy-L-Ribose from D-Ribose and L-Arabinose." TETRAHEDRON LETTERS., vol. 38, no. 24, 1997, OXFORD GB, pages 4199-4202, XP004074789 * |
Cited By (16)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
KR100426030B1 (en) * | 2000-07-22 | 2004-04-03 | (주) 한켐 | Chirality conversion method in lactone sugar compounds |
KR100440461B1 (en) * | 2000-08-19 | 2004-07-15 | (주) 한켐 | Process for the preparation of L-ribose using 1,4-lactone |
JP2006232861A (en) * | 2000-11-29 | 2006-09-07 | Mitsui Chemicals Inc | L-nucleic acid derivative and process for synthesis thereof |
KR100449310B1 (en) * | 2001-11-08 | 2004-09-18 | 주식회사 삼천리제약 | preparation method of 2-deoxy-L-ribose |
KR100433179B1 (en) * | 2001-11-10 | 2004-05-27 | 주식회사 삼천리제약 | Method for Producing 2-Deoxy-L-ribose |
KR100446560B1 (en) * | 2002-07-15 | 2004-09-04 | 주식회사 삼천리제약 | Method for Producing 2-Deoxy-L-ribose |
EP1556396A4 (en) * | 2002-07-15 | 2007-10-24 | Samchully Pharm Co Ltd | Method for producing 2-deoxy-l-ribose |
WO2004007513A1 (en) * | 2002-07-15 | 2004-01-22 | Samchully Pharm. Co., Ltd. | Method for producing 2-deoxy-l-ribose |
US8114987B2 (en) | 2006-12-06 | 2012-02-14 | Samchully Pharm. Co. Ltd. | Preparation method of 2-deoxy-L-ribose |
CN102108089A (en) * | 2009-12-29 | 2011-06-29 | 唐传生物科技(厦门)有限公司 | Preparation method of 2-deoxy-L-ribose |
CN102108089B (en) * | 2009-12-29 | 2013-10-02 | 唐传生物科技(厦门)有限公司 | Preparation method of 2-deoxy-L-ribose |
CN102153600A (en) * | 2010-02-12 | 2011-08-17 | 何遂庆 | Method for preparing 2-deoxidation-L-ribose |
CN102153600B (en) * | 2010-02-12 | 2016-09-14 | 何遂庆 | The preparation method of 2-deoxidation-L-ribose |
NL2007240C2 (en) * | 2011-08-09 | 2013-02-12 | Konink Co Peratie Cosun U A | Sugar-based plasticizers. |
WO2013022345A1 (en) * | 2011-08-09 | 2013-02-14 | Koninklijke Coöperatie Cosun U.A. | Sugar-based plasticizers |
CN107778334A (en) * | 2016-08-26 | 2018-03-09 | 康普药业股份有限公司 | A kind of preparation method of Sebivo key intermediate |
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AU6686698A (en) | 1998-09-22 |
WO1998039347A3 (en) | 1998-10-22 |
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