CHIMERIC RECEPTORS FOR JA -STAT SIGNAL TRANSDUCTION
The research leading to the present invention was supported, at least in part, by United States Public Health Service Grant Nos. R01 CA46465 from the National Cancer Institute, and Grant No. 1 -R01 AI36450 from the National Institutes of Health. Accordingly, the Government may have certain rights in the invention.
FIELD OF THE INVENTION
The present invention relates to genetically engineered chimeric receptor proteins, cells expressing the same, and uses thereof to overcome deficiencies in cellular activation mechanisms and to define new therapeutic modalities.
BACKGROUND OF THE INVENTION
Cytokine Activation of Cells Each cytokine which utilizes the Jak-Stat signal transduction pathway activates a distinct combination of members of the Jak and Stat families. Thus, either the Jaks, the Stats or both could contribute to the specificity of ligand action. The Jak-Stat signal transduction pathway was first discovered for interferon alpha
(IFN-σ) and interferon gamma (IFN-j/) by the complementation of mutant cell lines defective in response to IFN-j/ and/or IFN-σ [Velazquez et al. , Cell, 70:313- 322 (1 992); Watling et al. , Nature, 366:230-235 ( 1 993); Muller et al., Nature, 366: 1 29- 1 35 ( 1 993) and EMBO, 12:4221 -4228 ( 1 993); Darnell et al. , Science, 264: 141 5-1421 ( 1 994); Leung et al. , Mol. Cell. Biol. , 15: 1 31 2-1 31 7 (1 995)]. It has subsequently been shown that the same general pathway is activated by most cytokines and some growth factors [for review, see Ihle and Kerr, Trends Genet., 1 1 :69-74 (1 995); Taniguchi, Science, 268:251 -255 ( 1995)]. This pathway is activated predominantly through receptors which do not possess intrinsic intracellular kinase domains and belong to the class I or class II cytokine receptor superfamily. The lack of inherent catalytic activity in these receptors is overcome through the use of receptor-associated kinases of the Janus kinase (Jak) family. Upon ligand binding, the receptor chains oligomerize, allowing the associated kinases to interact and likely crossactivate each other by tyrosine
phosphorylation. Subsequently, the activated Jaks directly phosphorylate the intracellular domains of the receptors on specific tyrosine residues. This phosphorylation allows the selective recruitment of SH2-domain containing proteins, particularly Stats (Signal transducers and activators of transcription), through a specific interaction between the Stat SH2 domains and the phosphotyrosines within the Stat recruitment sites of the intracellular domains of the receptor chains. These receptor-associated Stats are then rapidly phosphorylated, likely by the activated Jaks [Quelle et al., supra]. The phosphorylation of the Stats is followed by Stat dimeπzation, translocation to the nucleus and activation of cytokine inducible genes.
The Jak and Stat families are growing rapidly. The Jak family consists of four members so far: Jak1, Jak2, Jak3 and Tyk2 [Wilks eta/., Mol. Cell. Biol., 11:2057-2065 (1991); Silvennomen etal., Proc. Natl. Acad. Sci. USA, 90:8429-8433 (1993); Firmbach-Kraft etal., Oncogene, 5:1329-1336 (1990); Witthuhn etal., Cell, 742:27-236 (1994); Kawamura et al., Proc. Natl. Acad.
Sci. USA, 91:6374-6378 (1994); for review see Ziemiecki etal., Trends Cell Biol., 4:207-212 (1994); Ihle etal., Trends in Biochemical Sciences, 19:222- 227 (1994); Ihle etal., Trends Genet, 11:69-74 (1995); Ihle and Kerr, supra]. The Stat family now includes seven different members, which have been cloned: Statlα, Statl/?, and Stats2-6 [Schindler et al., Proc. Natl. Acad. Sci. USA,
89:7836-7839 (1992); Fu etal., Proc. natl. Acad. Sci. USA, 89:7840-7843 (1992); Zhong etal., Science, 264:95-98 (1994) and Proc. Natl. Acad. Sci. USA, 91:4806-4810 (1994); Yamamoto etal., Mol. Cell. Biol., 14:4342-4349 (1994); Akiraefa/., Cell, 77:63-71 (1994); Wakao etal., Cell, 70:2182-2191 (1994); Hou etal., Science, 265:1701-1706 (1994); International Patent
Publication WO 95/08629, by Darnell etal., published March 30, 1995; and International Patent Publication No. WO 93/19179, by Darnell et al., published September 30, 1993] and several others, which were identified by electrophoretic mobility shift assays, but have not been cloned yet [Meyer et al., J. Biol. Chem., 269:4701-4704 (1994); Finbloom etal., Mol. Cell. Biol.,
14:2113-2118 (1994); Tian et al., Blood, 84:1760-1764 (1994); Finbloom and Winestock, J. Immunol., 155:1079-1090 (1995); Frank etal., Proc. Natl. Acad. Sci. USA, 92:7779-7783 (1995)].
The Jak kinases are characterized by seven conserved domains: two PTK- related domains and five domains with unknown functions [Ziemiecki et al., supra]. The main difference between Jaks and other protein tyrosine kinases (PTK) is that along with a kinase domain, shown to be active [Wilks et al., supra], they also contain a PTK-like domain with substitutions of several residues essential for kinase activity. Thus, the second domain is expected to be inactive as a PTK and probably has some other function. Another feature of this family is the lack of any detectable SH2 or SH3 domains. The functions of the other five regions of homology are also unknown.
Stats represent proteins containing SH2, SH3 and DNA-binding domains [for reviews, see Darnell et al., supra; Fu, Journal of Leukocyte Biology, 57:529-535 (1995)]. The highly selective and specific interaction between Stat SH2 domains and the phosphotyrosine containing Stat recruitment sites on the intracellular domains of the cytokine receptors determines which Stats are to be recruited to a particular receptor complex [Heim et al., Science, 267:1347-1349
(1995); Stahl etal., Science, 267:1349-1353 (1995)].
The intracellular domain of each cytokine receptor specifically associates with one or more distinct Jaks. While some Jaks and Stats participate in several cytokine signalling pathways, others are more restricted. In the case of Jaks, Jak2 and, especially Jak1, associate with receptors participating in different apparently unrelated cytokine-receptor systems [for reviews, see Ziemiecki et al., supra; Ihle etal., supra; Taniguchi, supra; Ihle and Kerr, supra]. Jak3 appears to be restricted to the ligand receptor systems through its association with the IL-2R c chain [Johnston etal., Nature, 370:151-153 (1994); Witthuhn et al., supra; Russell etal., Science, 266:1042-1045 (1994); Miyazaki etal.,
Science, 266:1045-1047 (1994); Tanaka et al., Proc. Natl. Acad. Sci. USA, 91:7271-7275 (1994)]. Tyk2 was shown to be activated during IFN-σ signalling [Velazquez etal., supra; Barbieri etal., Eur. J. Biochem., 223:427-435 (1994)] and also during CNTF-related cytokine signalling, albeit only in certain cell types [Stahl etal., Science, 263:92-95 (1994); Lϋtticken etal., Science, 262:89-92
(1994)]. Recently, the activation of Tyk2 by IL-10 and IL-12 was shown [Finbloom and Winestock, supra; Bacon et al., J. Exp. Med., 181:399-404
(1995); Ho etal., Mol. Cell. Biol., 15:5043-5053 (1995)]. Thus, the Jaks may contribute to the specificity of signal transduction at some level.
Interferon-/ Receptor Complex The interferon gamma (IFN- ) receptor complex consists of at least two receptor components, a ligand binding chain and a signal transducing chain, each of which is a member of the class II cytokine receptor family [Bazan, Proc. Natl. Acad. Sci. USA, 87:6934-6938 (1990); Thoreau etal., FEBS Lett.282:26-31 (1991)]. Isolation of the two chains of the interferon gamma receptor (IFN--R) has permitted an analysis of the contributions of each to the signal transduction mechanism. The first chain of the receptor (IFN- R1) binds ligand [Rashidbaigi et al., Proc. Natl. Acad. Sci. USA 83:384-388 (1986); Aguet et al., Cell, 55:273-280 (1988); Kumar et al., J. Biol. Chem.264:17939-17946 (1989); Hemmi βf al., Proc. Natl. Acad. Sci. U.S.A.86:9901-9905 (1989); Gray et al., Proc. Natl. Acad. Set USA, 86:8497-8501 (1989); Munro and Maniatis, Proc. Natl. Acad. Sci. USA 86:9248-9252 (1989); Cofano et al , J. Biol Chem.,
265:4064-4071 (1990)]. The second chain of the receptor (IFN--R2) does not bind ligand by itself but is required for signal transduction [Rashidbaigi et al., 1986, supra; Jung et al., Proc. Natl. Acad Sci USA 84:4151-4155 (1987), Somat. Cell Mol. Genet. 14:583-592 (1988), J Biol. Chem.265, 1827-1830 (1990); Soh et al., Proc. Natl. Acad. Sci. USA 908737-8741 (1993), Cell,
76:793-802 (1994); Hemmiefal., Cell 76:803-810 (1994); Kotenko efal., J. Biol. Chem.270:20915-20921 (1995)] It was suggested that the two chains of the IFN- receptor bind the ligand with a higher apparent affinity than the IFN- )/R1 chain alone [Lai, The Mapping of the Murine and the Human Interferon Gamma Receptor. Ph.D. thesis submitted to the Graduate School - New
Brunswick, Rutgers, The State University of New Jersey, and the Graduate School of Biomedical Sciences, University of Medicine and Dentistry of New Jersey (1994); Marsters et al., Proc. Natl. Acad. Sci. USA 92:5401-5405 (1995)]. Though the cytoplasmic domains of both IFN- receptor subunits lack tyrosine kinase activity, ligand binding is coupled to the induction of protein phosphorylation, which is essential for receptor function Jak1 and Jak2 are required for signal transduction by IFN-)/. Further analyses of the interactions have shown that the IFN- R1 chain binds Jak1 [Igarashi ef al., J. Biol. Chem.
269:14333-14336 (1994); Sakatsume etal., J. Biol. Chem.270:17528-17534 (1995); Kotenko et al., 1995, supra)] and the intracellular domain of the \FN-yR2 chain brings Jak2 into the signal transduction complex [Kotenko et al., 1995, supra]. The only apparent function of the intracellular domain of the IFN--/R2 chain is to bring Jak2 into the signal transduction complex. Upon binding of the ligand, IFN-y, to the IFN-J/R1 chain, activation of Jak1 and/or Jak2 by reciprocal transphosphorylation causes the phosphorylation of IFN--R1 [Greenlund et a\., J. Biol. Chem.268:18103-18110 (1994); Kotenko etal., 1995, supra]. Statlσ, a latent cytoplasmic transcription factor [Schindler etal., Proc. Natl. Acad. Sci USA 89:7836-7839 (1992)] binds to the phosphorylated IFN-J/R1, undergoes tyrosine phosphorylation [(Shuai etal., Science 261:1744-1746 (1993)] and forms homodimers that translocate to the nucleus and initiate transcription of IFN- inducible genes (for review see Darnell etal., Science 264:1415-1421 (1994)).
The detailed cell surface events that initiate signaling by IFN-j/ have not been clearly elucidated. As with other cytokine receptors, oligomeπzation upon ligand binding is the first step in the signaling cascade of IFN-JΛ IFN-J/ IS a non-covalent symmetrical homodimer [Ealick etal., Science 252:698-700 (1991)] that binds to IFN-JR1 with a stoichiometry of 1:2 [Fountoulakis etal., Eur. J. Biochem. 208:781-787 (1992); Greenlund et al., J Biol. Chem., 268:18103-18110,
(1993)]. It is known that a species-specific interaction between the extracellular domains of the IFN--R1 and IFN- R2 subunits is essential for signaling [Gibbs et al., Mol. Cell. Biol. 11:5860-5866 (1991); Hibino etal., J. Biol. Chem. 267:3741-3749 (1992); Hemmi etal., Proc. Natl. Acad. Sci. USA 89:2737- 2741 (1992)]. The IFN-J/R2 subunit does not by itself bind the ligand, but can be crosslmked to IFN- when both IFN-/R1 and IFN- R2 chains are present [Kotenko etal., 1995, supra]. Several lines of evidence [Marsters etal., 1995, supra; Kotenko etal., 1995, supra] suggest that the IFN- signaling complex contains two IFN-JR1 chains, and probably two IFN-|/R2 chains. The requirement for formation of a heteromeric ternary complex containing two IFN- jR1 chains, two IFN--R2 chains and one IFN* homodimer remains unexplained in light of the fact that the IFN--R1 chain possesses both a Jak1 binding site and a Statlσ recruitment site. Therefore, a heterodimer of IFN--R1 and IFN--R2 or a
homodimer of IFN-) R1 alone, upon ligand binding, would be expected to bring into apposition a Jak 1 and a Jak2 kinase in the former case, and two Jak 1 kinases in the latter case, to activate each other by transphosphorylation. It is not known whether the absolute requirement for two Jaks is unique to the IFN receptor systems, or if it extends to other receptor systems in which two Jaks are activated. Although IL-6 activates Jak 1 , Jak2, and Tyk2 [Ihle et al., Annu. Rev. Immunol., 13:369-398 ( 1 995)], only Jak1 is involved in IL-6-ιnduced gp1 30 tyrosme phosphorylation [Guschin et al., EMBO J., 14: 1421 -1429 (1 995)].
Erythropoietin Receptor
The erythropoietin (Epo) receptor, EpoR, is a member of the class 1 cytokine receptor subfamily. A single chain appears to encode both hgand-binding and signal-transducing functions. Epo induces homodimerization of the receptor and appears to signal via the dimeπzed receptor complex [reviewed by Wells, Curr. Opinion Cell Biol. 6: 1 63-1 73 ( 1 994)]. Jak2 is associated with the cytoplasmic domain of the EpoR and is activated upon gand-induced dimeπzation of the receptor [Witthuhn et al., Cell 74:227-236 ( 1 993)] Strikingly an Arg-to-Cys mutation in the extracellular domain of EpoR results in ligand independent dimeπzation/oligomeπzation and constitutive, ligand-independent activation of Jak2 and mitogenesis [Watowich et al , Proc Natl. Acad. Sci. USA, 89:2140-
2144 ( 1 992); Yoshimura et al. , Nature, 348:647-649 (1 990)].
lnterleukιn-10 Receptor IL-10 is a pleiotropic cytokine that plays an important role in the regulation of immune response by controlling the functions of myeloid and lymphoid cells [reviewed in Moore et al. , Annu. Rev. Immunol, 1 1 : 1 65-90 ( 1 993)]. Distinct activities of IL-10 on TH1 - and TH2-related immune functions suggest a possible role in controlling development of the class of an immune response. IL-10's multiple activities have been shown so far to include: the ability to inhibit macrophage activation and suppress cytokine synthesis by activated T cells and NK cells by blocking the ability of macrophages to act as antigen-presenting or costimulatory cells; and costimulation of proliferation and differentiation of B cells, mast cells, and thymocytes. IL-10 can inhibit dendritic and antigen
presenting cell (APC) functions. It can also inhibit cytokine synthesis and effector functions of TH1 cells. IL-10 has distinct pathways for its activities, for example on NK cells. Thus, although both IL-4 and IL-10 inhibit IL-2 induced synthesis of IFN-p and TNF-σby PBMC, IL-1 0 does not affect IL-2-induced NK or PBMC proliferation, nor does it affect IL-2-induced LAK activity. The effects of
IL-10 on IFN-| suppression are mediated by CD14 + cells (monocytes/macrophages) [Hsu et al. , Int. Immunol. 4:563-569 ( 1 991 )].
The IL- 10 receptor binding chain was isolated [Liu et al. , J. Immunol. 152: 1 821 - 1829 ( 1 994)] and binds to IL-1 0, but surprisingly does not seem to bind vlL-10 [See Ho and Moore, Therapeutic Immunology, 1 : 1 73-1 85 (1 994)]. Recently, as described herein and more fully in co-owned, co-pending application Serial No. 08/683,743, filed on the same date as this application, having attorney docket no. 601 -1 -050, entitled "CYTOKINE RECEPTOR SIGNAL TRANSDUCTION CHAIN" by Sidney Pestka and Serguei Kotenko, which is incorporated herein by reference in its entirety, the protein CRFB4 [Lutfall et al , Genomics, 16:366-
373 ( 1 993)] was identified as the second chain of the functional IL-10 receptor, which is necessary for signal transduction.
Non-MHC-Restricted T Cells Previous reports describe chimeric receptors comprising extracellular domains capable of binding to an antigen in a non-MHC restricted manner, for example an immunoglobulin antigen binding domain, a transmembrane domain, and a cytoplasmic domain of a T cell receptor complex or Fcf receptor-1 gamma chain capable of activating a signalling pathway have been described (Capon et al. , U.S. Patent No. 5,359,046, issued October 25, 1 994). Functional antigen- specific receptors were generated in B cells [Sanchez et al. , J. Exp. Med.
178: 1 049-1055 (1 993)] and T cells [Burkhardt et al. , Mol. Cell. Biol. , 14: 1 095- 1 103 ( 1 994)] by creating a chimeric receptor by fusing the Igσ and lg ? signal transduction chains to IgM. These reports demonstrated that the molecular structures involved in antigen receptor signaling pathways are conserved between T and B cells.
One problem with the chimeric receptor constructs of the prior art is that
although they permit creation of non-MHC restricted T cells, the signal transduction machinery may not extend to other effector cells that do not respond to the same molecule structures involved in receptor signalling that are employed by B cells and T cells. Thus, there is a need in the art for mediating signal transduction through an entirely different set of pathways.
There is a further need in the art to identify alternative signalling routes in subjects who are deficient in one pathway or another For example, there is a need to compensate for the lack of Jak3 in some individuals, who consequently present with a SCID phenotype.
These and other deficiencies of the prior art are addressed by the present invention, which particularly relates to activation via cytokine and growth factor receptor signal transduction pathways through binding of alternative ligands to chimeric receptors.
The citation of any reference herein should not be construed as an admission that such reference is available as "Prior Art" to the instant application.
SUMMARY OF THE INVENTION
The present invention advantageously, and unexpectedly, harnesses cytokine and growth factor receptor cellular activation pathways for responses to different receptor ligands, thus enabling reconstitution of cellular activation to a ligand, such as a cytokine or growth factor, where some deficiency prevents activation by the native pathway; targeting of effector cells to tumors, virally infected cells, or autoimmune cells; and creating new cytokine or growth factor sensitivities in responder cells, e.g. , to develop an assay system in which cells not normally responsive to a given cytokine are rendered responsive.
Accordingly, the invention provides a chimeric receptor for cellular activation comprising an extracellular domain capable of binding to a cognate molecule, and a cytokine intracellular domain capable of interacting with a Jak-Stat protein, thereby participating in signal transduction, with the proviso that the
cytokine intracellular domain is not naturally associated with the extracellular domain. Preferably, the cytokine intracellular domain interacts with a Jak protein selected from the group consisting of Jak 1 , Jak2, Jak3, and Tyk2. In another embodiment, preferably the cytokine intracellular domain interacts with a Stat protein selected from the group consisting of Statl σ, Statl ?, Stat2,
Stat3, Stat4, Statδ, and Stat6.
The invention provides for a wide variety of extracellular domains for the chimeric receptors, provided that the binding activity of the extracellular domain accomplishes receptor dimeπzation or oligomeπzation. Thus, in one embodiment, the chimeric receptor extracellular domain is selected from the group consisting of a cytokine and a growth factor. A cell that expresses a chimeric receptor of this aspect of the invention would be targeted to cells bearing the cognate cytokine or growth factor receptor. In specific embodiments of this aspect of the invention, the cytokine is selected from the group consisting of ιnterleukιn-1 , ιnterleukιn-2, ιnterleukιn-3, ιnterleukιn-4, ιnterleukιn-6, ιnterleukιn-8, ιnterleukιn-10, and ιnterleukιn-1 2.
Alternatively, the chimeric receptor may employ an extracellular domain that is a receptor ligand binding extracellular domain. For example, the receptor ligand binding extracellular domain is selected from the group consisting of a cytokine receptor ligand binding domain, and a growth factor receptor ligand binding domain. In this embodiment of the invention, where a deficiency in the native signal transduction pathway prevents activation to a cytokine or growth factor, substitution of a different cytoplasmic signal transduction domain for the ineffective domain in a chimeric receptor construct can circumvent the deficiency. Alternatively, cells that normally do not respond to a given cytokine or growth factor can be made responsive by substituting cytoplasmic signal transduction domains from a growth factor or cytokine receptor to which the cells responds for the native cytoplasmic domain on the naturally non-responsive receptor. The Examples, infra, demonstrate these aspects of the invention. In specific embodiments, the cytokine receptor ligand binding domain is an extracellular domain selected from the group consisting of Interferon-σ, Interferon-/.?, Interferon-1 , ιnterleukιn- 1 , ιnterleukιn-2, ιnterleukιn-3, ιnterleukιn-4,
ιnterleukιn-6, ιnterleukιn-8, ιnterleukιn-10, ιnterleukιn-1 2, and erythropoietin.
In yet another embodiment, the chimeric receptor employs an immunoglobulin antigen binding domain, e.g. , a heavy chain, a light chain, a heavy chain-light chain dimer, a single chain Fv, as the receptor ligand binding extracellular domain.
Naturally, the present invention provides a genetically engineered nucleic acid encoding a chimeric receptor for cellular activation comprising an extracellular domain capable of binding to a cognate molecule, and a cytokine intracellular domain capable of interacting with a Jak-Stat protein, thereby participating in signal transduction, with the proviso that the cytokine intracellular domain is not naturally associated with the extracellular domain Thus, the invention includes a nucleic acid encoding each of the chimeric receptors set forth above.
Preferably, the nucleic acid of the invention is capable of expressing the chimeric receptor protein Accordingly, the invention provides an expression vector comprising the nucleic acid operably associated with an expression control sequence Preferably, the expression control sequence, e.g. , promoter, provides for high level expression in the cell in which the expression vector is introduced.
In addition to the expression vectors of the invention, also provided is a genetically engineered host cell comprising the expression vector. Suitable host cells include bacterial, yeast, and eukaryotic cells Preferably the host cell is a mammalian cell. In one aspect, the host cell is an effector cell, and the expression vector is introduced into the effector cell ex vivo or in vivo, as set forth below. In another embodiment, the cell is a responder cell, and the expression vector is introduced into the effector cell ex vivo or in vivo, as set forth below. In yet another embodiment, the host cell is a cultured cell, which provides a novel cytokine or growth factor assay system.
Using the chimeric receptors encoded by the expression vectors, the invention provides a method for reconstituting responsiveness to a soluble factor comprising administering the expression vector to cells of a host animal lacking
responsiveness to a soluble factor, wherein the chimeric receptor encoded by the expression vector comprises an extracellular domain that binds to the soluble factor. Administration of the expression vector can be accomplished ex vivo or in vivo.
In still another aspect, the invention provides targeted effector cells, which are prepared by introducing the expression vector into effector cells, wherein the chimeric receptor encoded by the expression vector comprises an extracellular domain which is an antibody antigen binding domain. In specific embodiments, the effector cells are selected from the group consisting of natural killer cells, lymphokine activated killer cells, cytotoxic T cells, macrophages/monocytes, neutrophils, basophils, and polymorphonuclear leukocytes. The effector cells of the invention are useful in a method for treating a disease or disorder characterized by disregulation of a cellular activity; the invention contemplates administering the effector cells targeted to the cell which is undergoing disregulation. The disease or disorder may be, but is by no means limited to, viral infection, cancer, inflammatory disease, and autoimmune disease.
In another embodiment, the invention provides targeted effector cells comprising an expression vector that encodes a chimeric receptor having an extracellular domain which is selected from the group consisting of a cytokine and a growth factor. More particularly, the effector cells may be selected from the group consisting of natural killer cells, lymphokine activated killer cells, cytotoxic T cells, macrophages/monocytes, neutrophils, basophils, and polymorphonuclear leukocytes. Other effector cells may be chosen. By analogy with the cells that are modified to express an immunoglobulin chimeric receptor, the invention provides a method for treating a disease or disorder characterized by disregulation of a cellular activity comprising administering the effector cells containing a growth factor or cytokine chimeric receptor targeted to the cell which is undergoing disregulation, which cell undergoing disregulation expresses the receptor for the growth factor or the cytokine. As described above, the disease or disorder may be, but is not limited to, viral infection, cancer, inflammatory disease, and autoimmune disease.
DESCRIPTION OF THE DRAWINGS
FIGURE 1. Structure of Chimeric Receptors. Hu-IFN- R1 (cRD and Hu-IFN-|/R2 (|/R2) are the intact chains of the human IFN-)/ receptor complex. All chimeric receptors have the extracellular domain of the human IFN--R2 and the transmembrane and intracellular domains of different human receptors: -/R2/-/R1,
Hu-IFN-|/R1; |R2/σR1, Hu-IFN-σR1 [Uze, etal, Cell 60:225-234 (1990)]; γR2lαR2, Hu-IFN-σR2 [Novick etal, Cell 77:381-400 (1995)]; R2/CRF, CRFB4 [Lutfalla etal., Genomics 16:366-373 (1993)]; γR2/γc, IL-2 receptor yc chain [Takeshita eta/., Science 257:379-382 (1992)]. Although it was reported that the short form of Hu-IFN-σR2 we used binds Jak2 [Novick etal., supra], a "?" is placed under the γRMαR2 chimera because only the long form of Hu-IFN-)R2 is functional [Lutfalla etal., EMBO J. 14:5100-8 (1995); Domanski etal., J. Biol. Chem. 270:21606-11 (1995)].
FIGURE 2. Expression of Chimeric Receptors in COS-1 Cells. COS-1 cells were transfected with the expression vectors encoding different chimeric receptors: γR2, γR2/αR,, γR2/αR2, -R2/CRF, R2 R c< γR2/γR> and R2 κR1t456. The intracellular domain of the chimera ι/R2/|/R1t456 represents the intracellular domain of Hu-IFN-|/R1 terminated by premature stop codon after amino acid 456 [Kotenko etal., J. Biol. Chem.270:20915-21 (1995)]. Cells were harvested after three days and lysed as described under "Experimental Procedures" in
Example 1. Lysates were resolved on SDS-PAGE, transferred to PVDF membranes and Western blots probed with antι-Hu-IFN-)/R2 antibodies.
FIGURE 3. Covaient Cross-linking of [32P]IFN-γ to the Receptors. Cells were harvested and incubated with [3ZP]Hu-IFN-| with or without addition of a 200- fold excess of unlabeled Hu-IFN-|/ and cross-linked as described under
"Experimental Procedures" in Example 1. The extracted ligand:receptor complexes were analyzed on a 7.5% SDS-polyacrylamide gel. The cell lines indicated on the figure represent the 16-9 hamster cells (expressing the exogenous Hu-IFN-)/R1 chain) transfected with plasmids encoding different second receptor chains: κR2; R2/ R1, R2/ R1 456, R2/σR1, R2/o*R2, -R2/CRF and γR2lγc. The arrows designate the complexes of Hu-IFN-|/ with different
receptors: yR , , γR2, R2/αR1 , R2/σR2, (/R2/CRF, γR2lγc, yR2/γR , and R2/ R1 t456.
FIGURE 4. Induction of HLA-B7 Surface Antigen. Induction of HLA-B7 surface antigen in cells treated with Hu-IFN-)/. The parental 1 6-9 cells express only exogenous Hu-IFN-(/R 1 (A); the other cells express both yRλ and various receptor chains: (B); γR2lγR ι (C); γ \ lγR U^ (D); γR2lαRλ (E); γR2lαR2 (F); 1 R2/CRF (G); and γR2lγc (H). The γR2lγc + ~ι~y\χ.2 cell line represents 1 6-9 cells cotransfected with expression vectors encoding R2 c and human Tyk2. HLA-B7 antigen was detected by treatment of cells with mouse anti-HLA monoclonal antibody W6/32 followed by treatment with fiuorescein isothiocyanate-conjugated goat anti-mouse IgG. The cells were then analyzed by cytofluorography The unstippled areas represent cells not treated with IFN; stippled areas represent cells treated with 1000 units/ml of Hu-IFN-) . Relative fluorescence values are shown on a log scale as described [Hibino et al , J. Biol Chem. 267:3741 -3749 ( 1 992)].
FIGURE 5. Tyrosine Phosphorylation of Jaks upon IFN-γ Treatment. Untreated and Hu-IFN-)/ treated cells were lysed and immunoprecipitated with antι-Jak2 (A), antι-Tyk2 (B, D and E), antι-Jak3 (F) and anti-phosphotyrosine antibodies (D) as described under "Experimental Procedures" in Example 1 . The cell lines are as indicated on the figure and defined in the legends to Figure 3 and 4. In addition, the )/R2/X -ι Tyk2 cell lines represents 1 6-9 cells cotransfected with the designated expression vectors encoding R2/X receptors and human Tyk2; and the |/R2/X + Jak3 cell line, 16-9 cells cotransfected with designated expression vectors encoding ( R2/X receptors and Jak3. Immunoprecipitates were resolved on SDS-PAGE, transferred to PVDF membranes and probed with various antibodies: anti-phosphotyrosine antibodies, first panels in A, B, D, E and F; with antι-Jak2 antibodies, second panel in A; with antι-Tyk2 antibodies, C, D and second panels in B and E; and with antι-Jak3 antibodies, second panel in F.
FIGURE 6. Electrophoretic Mobility Shift Assay (EMSAJ. EMSAs were performed as described under "Experimental Procedures" in Example 1 with the
22 base pair labeled sequence containing the Statl σ binding site corresponding
to the GAS element in the promoter region of the human IRF-1 gene with nuclear extracts from the cells indicated on the figure and defined in the legend to Figure 4. In addition, HEp-2 cells, a human epidermoid larynx carcinoma cell line, were used as a positive control. Supershift assays were performed with specific anti-Statl σ antibodies. The position of the Statl σ DNA-bindmg complexes are indicated by the arrow.
FIGURE 7. Model of the Signal Transduction by IFN-γ. After oligomeπzation of the IFN-y receptor chains caused by ligand binding, the IFN-*/ homodimer binds to two IFN-) R1 chains which in turn brings two associated \ z -γR2 (AF-1 ) chains and all the associated components (Jaks and Stats) into the complex
[Kotenko et al. , supra]. The interaction of Jaks with the intracellular chains initiates the cascade of events resulting in activation of specific Stats as described in the text. JAS, represents Jak association site; SRS, Stat recruitment site; ST, signal transducing receptor; HR, helper receptor; PTK, protein tyrosine kinase; γR2I , chimeric receptor with the extracellular domain of the IFN-J/R2 and the intracellular domains of various receptors swapped for the intracellular domain of the Hu-IFN-(/R2 chain.
FIGURE 8. Map of expression vector pEF2.
FIGURE 9. Induction of HLA-B7 Surface Antigen in Hamster Cells by IL- 10. (A) The hamster cells stably transfected with the Hu-IL-10R/|/R1 chimeric receptor chain were treated with IL-1 0 or left untreated. (B) The hamster cells stably transfected with both IL-10R/* R 1 chimeric receptor and CRFB4 chains were treated with IL-10 or left untreated. The cells were then analyzed by flow cytometry as described. The unstippled areas represent cells left untreated with IL-10; stippled areas represent cells treated with IL-10. HLA-B7 antigen was detected by treatment of cells with mouse anti-HLA monoclonal antibody W6/32 followed by treatment with fiuorescein isothiocyanate-conjugated goat anti- mouse IgG. Relative fluorescence values are shown on a log scale as described [Hibino et al. , J. Biol. Chem. , 267:3741 -3749 (1 992)].
FIGURE 10. Schematic representation of native and chimeric receptors. EpoR,
■ R1 and | R2 represent the wild-type human erythropoietin receptor, Hu-IFN-| R 1 and Hu-IFN-| R2, respectively. The various chimeric constructs were made by joining the extracellular domain (top) with the transmembrane and cytoplasmic domains (bottom) of the receptors indicated. The EpoR(p91 ) and EpoR/j R2(p91 ) chimeras contain the five-amino acid Stati c recruitment site of Hu-IFN-* R1 at the 3' end of the intracellular domain of EpoR and IFN-| R2 respectively.
FIGURE 1 1 . Induction of class I MHC surface antigens. Induction of class I MHC surface antigens by Hu-IFN-) or Epo, as indicated, of the parental 1 6-9 cells which expresses only Hu-IFN-) R1 (panel A), and of 1 6-9 cells expressing Hu-IFN-|/R1 along with various transfected receptor chains: IFN-) R2 (panel B),
| R2/EpoR (panel C), EpoR (panel D), EpoR/ R1 (panel E), both EpoR/( R 1 and EρoR/ R2 (panel F), R 1 /EpoR(p91 ) (panel G) and EpoR(p91 ) (panel H). Cells were treated with Hu-IFN-)/ at 1000 units/ml, or Epo at 1 0 units/ml for 72 hours as described. Class I MHC antigens were detected by treatment of cells with mouse antι-human-HLA-B7 monoclonal antibody (W6/32) followed by treatment with FITC-conjugated goat anti-mouse IgG and cytofluorographic analysis. The unshaded regions represent untreated cells and shaded regions represent cells treated with Hu-IFN-)/ (panels A-C, G) or Epo (panels D-F, H).
FIGURE 12. Induction of expression of class I MHC surface antigens as a function of interferon concentration. Cells were treated with Hu-IFN-)/ at concentrations of 0, 1 , 1 0 and 1 00 units/ml. Class I MHC antigens were detected as described in the legend to Figure 1 1 . Relative fluorescence values are based on the mean fluorescence of cell populations (n = 10,000).
FIGURE 13. Induction of class I MHC antigens as a function of Epo concentration. The induction of expression of class I MHC antigens as a function of Epo concentration was assessed by treating cells with varying concentrations of Epo at 0, 0.1 , 1 , 1 0 and 50 units/ml. Relative fluorescence values are based on the mean fluorescence of cell populations (n = 1 0,000) .
FIGURE 14. Electrophoretic mobility shift assays of cells expressing chimeric receptors. Transfected clones of 1 6-9 cells stably expressing native IFN--/R2 or
chimeric IFN-)/R2/EpoR receptor subunits were induced with 1 ,000 units/ml of IFN-)/. Whole cell extracts were prepared, incubated with 32P-labeled GAS probe, complexes resolved by separation on 5 % polyacrylamide gels and detected by autoradiography. Competition experiments contained a 1 00-fold molar excess of unlabeled GAS oligonucleotide. Supershift assays were performed by the addition of 0.1 μg of antibody specific to Statl σ (anti-Statl σ) or Statδ (anti-Statδ). Arrow A marks the position of the Statl σ complex, B marks the position of the Statδ complex activated only in those cells expressing the intracellular domain of EpoR. Arrows C and D designate the positions of the Statl σ and Stat 5 complexes supershifted by their respective antibodies.
FIGURE 15. Electrophoretic mobility shift assays of cells expressing chimeric receptors. The 1 6-9 cells were transfected with EρoR/j/R 1 chimeric receptor or co-transfected with EpoR/|/R1 and EpoR/|/R2 chimeric constructs. A clonal population of transfected cells were induced with erythropoietin at 50 units/ml f or 1 5 minutes at 37 °C. Whole cell extracts were made and the electrophoretic mobility shift assay performed. As shown in the figure, induction with Epo causes activation of Statl σ in cells expressing EpoR/) R 1 alone as well as in those cells expressing both EpoR/)/R 1 and EpoR/)/R2. Addition of anti-Stat l σ antibody to the reaction mixture causes the Stat l α complex to be shifted.
FIGURE 16. Phosphorylation of Jak 1 and Jak2 kinases. Untreated and Hu-IFN-)/ or Epo treated cells were lysed and immunoprecipitated with monoclonal anti- phosphotyrosine antibodies (panels A and C) or polyclonal anti-Jakl (panel B) or anti-Jak2 antibodies (panel D) as described in "Materials and Methods" in Example 3. The cell lines are indicated on the figure and are defined in the legend to Figure 10. Immunoprecipitates were resolved on SDS-PAGE, transferred to PVDF membrane and probed with antι-Ja 1 (panels A and B) or anti-Jak2 (panels C and D) antibodies.
FIGURE 17. Schematic representation of receptor complexes. (A) represents the IFN--/R1 homodimer bound to IFN-)/. The cytoplasmic domains of the two chains are too far apart to permit transactivation of the two Jak1 kinases. (B) represents the active heteromeπc IFN- receptor complex with two IFN--/R1 and
two IFN- R2 subunits per complex. The associated Jak2 and Jak1 kinases activate one another by transphosphorylation, with subsequent phosphorylation and dimerization of Stat 1 σ. (C) depicts the EpoR/|/R1 homodimer which, unlike the IFN-| R 1 homodimer, permits transactivation of the two Jak1 kinases. (D) illustrates the structure of the heterodimer of EpoR/)/R 1 and EpoR/)/R2 which is the putative active receptor complex.
FIGURE 18. Induction of HLA-B7 Surface Antigen The parental 1 6-9 cells (A) and the H 1 /- R1 + L1 /-/R2 cells (B), 1 6 9 cells co-transfected with two expression plasmids encoding chimeric antibody-receptor molecules L1 /- R2 (VL domain of light chain of cc49 antibody fused to the transmembrane and intracellular domains of human IFN--/R2 chain) and H 1 /]/R1 (VL domain of heavy chain of cc49 antibody fused to the transmembrane and intracellular domains of human IFN--/R1 chain) were treated (stippled area) or untreated (unstippled areas) with paraformaldehyde fixed MCF-7 clone 4C 10 cells for 72 hours. HLA-B7 antigen was detected by treatment of cells with mouse anti-HLA monoclonal antibody
W6/32 followed by treatment with FITC-conjugated goat anti-mouse IgG. The cells were then analyzed by cytofluorography. Relative fluorescence values are shown on a log scale.
FIGURE 19. Expression of Chimeric Antibody-Receptor molecules. Two expression plasmids encoding chimeric antibody-receptor molecules L1 /-/R2 and
H 1 /|/R1 were co-transfected into mouse CTL1 -2 cells (B). The expression of the chimeric antibodies on the cell surface was detected by treatment of cells with FITC-conjugated goat anti-mouse IgG. The H 1 /)/R 1 + L1 /-/R2 16-9 cells (A) described in Figure 1 8 were used as a positive control, as they were shown to be antigen-responsive and thus express functional chimeric antibody-receptor molecules on the cell surface. Unstippled areas represent untransfected cells and stippled areas represent transfected cells. The cells were then analyzed by cytofluorography. Relative fluorescence values are shown on a log scale.
DETAILED DESCRIPTION OF THE INVENTION
As noted above, the present invention harnesses cytokine and growth factor
receptor cellular activation pathways for responses to different receptor ligands. The chimeric receptors enable reconstitution of cellular activation to a ligand, such as a cytokine or growth factor, where some deficiency prevents activation by the native pathway. They allow for targeting of effector cells to tumors, virally infected cells, or autoimmune cells. The chimer receptors further provide for creating new cytokine or growth factor sensitivities in responder cells, e.g. , to develop an assay system in which cells not normally responsive to a given cytokine are rendered responsive, and for testing the activation pathways of unknown cytoplasmic domains.
Cell surface receptors exist for small and large ligands. They are naturally occurring on eukaryotic and prokaryotic cells. According to the invention, chimeric cell surface receptors are linked to signal transduction mechanisms, thus creating functional synthetic receptors with customized ligand recognition and cellular activation pathways. The chimeric receptors can be designed to interact with any ligand (i.e. , almost any chemical moiety) and generate virtually any growth factor or cytokine receptor signals. For example, as shown in specific examples, infra, cells reactive to IFN-) can be engineered to respond via the IFN-)/ activation pathway in response to exposure to a cytokine (in specific examples, erythropoietin and IL-10) or an antigen (in a specific example, the tumor-associated antigen TAG72).
Expression of a chimeric receptor or chimeric receptor complex in cytotoxic cells, for example, receptors generated to interact specifically with tumor associated antigens, allows creation of cytotoxic cells that can then be used to eliminate cancer cells. Receptors generated specifically to interact with viral cell surface antigens can be used to eliminate these cells and effectively cure chronic viral infections such as AIDS, hepatitis, herpes, papiilomatosis, and many other infectious diseases. Furthermore, by eliminating specific cytotoxic cells recognizing self-antigens, autoimmune disease such as multiple sclerosis, rheumatoid arthritis, and other autoimmune disease could be attacked by this technology. The ability to harness the signal transduction machine of Class I and II cytokine receptors, which involves highly complex oligomeπzation and activation of Jak/Stat proteins, with chimeric receptor ectodomains, was wholly
unpredictable and unexpected.
Antibodies can be generated to virtually any antigen or hapten. Accordingly, the heavy and light chains of an antibody molecule represents a specific antigen- antibody reason comparable to the ligand-receptor interaction in its specificity. The range of specificities and chemical constants (e.g. , association constants, forward and reverse kinetic constants) for both these reactions are also comparable and represent a wide range of possibilities. For this reason, it seemed feasible that the use of specific antibodies could be used to generate synthetic receptors that could be coupled to the cytokine or growth factor signal transduction pathways of cells. By combining the appropπate heavy and light chains with specific cytoplasmic receptor chains, a wide variety of signal transduction pathways can be activated by the combinatorial choice of the cytoso c domains. In this manner, it would be possible to generate a synthetic receptor to any antigen or hapten and to couple this to virtually any cytokine or grow factor signal transduction array to activate specific biological pathways within the cell. By modifying these "ectodomains" and internal domains synthetically, one can modulate and develop an incomparable greater variety of synthetic receptors
Two major specific recognition components of the immune system are antibodies produced by B-lymphocytes and the T-cell receptor of T-lymphocytes
The outline noted above for antibodies can also be applied to the T-cell receptor By using specific chimeric T-cell receptors (T-cell receptor ectodomam coupled to different intracellular domains) that can recognize specific antigens in combination with the appropriate MHC molecules, it would be possible to upregulate and down regulate immune response, or to develop a parallel cellular response.
It is also possible to use ligands where appropriate as extracellular domains For example, in T-cell leukemia the IL-2 receptor is overexpressed on these cells. Antibodies to the IL-2R (with radioisotopes, toxins, or cytotoxic molecules attached) are being used to kill these cells to treat T-cell leukemia. To apply synthetic receptors of the invention to kill these cells, IL-2 itself would be
coupled (i.e. , fuse the IL-2 ligand as an ectodomam) to the appropriate receptor intracellular domains (e.g. , IFN- R complex) to introduce into effector cells, such as cytotoxic T-ceils, NK cells, and/or macrophages so that they are activated on interaction with the target T-cell leukemia cell, and thus kill the T-cell leukemia cells.
By modifying the intracellular domains of the receptors by the introduction of different components parts of various receptors, synthetic internal domains to generate customized signals can be constructed. By introducing these receptors into the appropriate cells (e.g. cytotoxic cells) cytotoxic or other effector response against any target cells can be generated. Response from one cytokine or growth factor can be converted to those of another to responses of another.
Combining the synthetic receptors and the desired growth factor or cytokine signal transduction mechanism to be activated with appropriate cells allows one to generate new cells with new and desired properties. For example, with the use of antibodies generated against tumor associated antigens (TAA) used as the ectodomam of the receptor and the activation of cellular signals with a cytotoxic cells such as a CD8 T-cell, natural killer (NK) cell, macrophage, or TIL cell, new cellular entities could be generated that will specifically target tumor cells to which the ectodomains of the antibodies are targeted. In a specific embodiment, effective chimeric receptors prepared from an anti TAG72 antigen antibody ectodomam and IFN-)/1 R and 2R signal transduction domains.
In another embodiment, multiple signal domains can be used. In this case several pathways known to enhance cytotoxic activity could be activated in a single cell with the same set of heavy and light chains by introducing a combinatorial set of endodomains attached to the heavy and light chains that serve as the ectodomains of these new receptors Such cells introduced into animals or patients with tumors expressing the tumor antigens will be activate when these cells interact with the tumor cell. Soluble forms of the TAA present in the serum will not activate the cells because the receptors require dimerization to initiate the signal transduction pathway. Cells can be developed
to downregulate immune responses by directing (targeting) the cytotoxic cells against specific lymphocytes generating the autoimmune response. The principles developed can be utilized for a variety of therapeutic studies.
In a further specific example, the CRFB4 transmembrane chain supports IL-1 0- induced signal transduction with the chimeric IL- 1 0REC/IFN-) R1 lc receptor. This chimeric receptor was used to test the model that IL-10 would produce a IFN- - like response if the IFN--/R1 intracellular domain were coupled to the intracellular domain of the IFN--/R 1 chain. It was also used to test the hypothesis that the IFN-r /R2 chain as a helper receptor is required only to bring a second kinase protein into the complex.
This technology also provides a new method for assessing whether receptor chains are part of a specific complex by forming chimeric receptors and evaluation cellular activation.
Various terms are used in this specification, which are more fully defined as follows:
The term "chimeric receptors" refers to a non-naturally occurring receptor molecule having an extracellular domain capable of binding to a ligand or a receptor; a transmembrane domain that anchors the chimeric receptor in the cell membrane; and a cytoplasmic domain that is involved in signal transduction by activation of the Jak/Stat pathway. In the nomenclature convention adopted for this application, the extracellular domain is identified, followed by a slash, followed by the identifier for the cytoplasmic domain. Thus, EpoR/IFN-) R1 refers to a chimeric receptor having an erythropoietin receptor extracellular domain, and an interferon-)/ receptor- 1 chain cytoplasmic domain.
The term "extracellular domain" refers to the part of the chimeric receptor that is located on the outside of the cell, and which therefore is capable of binding soluble ligand, such as a cytokine or growth factor, or binding to a binding partner on another cell, such as a target cell. Synonyms for the term extracellular domain used in this specification include "ectodomam, " a subscript
"EC," and "extracyoplasmic domain." Examples of extracellular domains of the invention include, but are not limited to, membrane immunoglobulin/single chain membrane immunoglobulin; a ligand binding domain of a cytokine or growth factor receptor; and a cytokine or growth factor, or receptor-binding domain δ thereof.
The term "cytokine" as used herein refers to cytokines, lymphokines, and other soluble protein mediators of intercellular signalling that are involved in cell growth, recruitment, inflammation, immunity, differentiation, and repair. These include, but are not limited to, T-cell-derived cytokines (interleukin (IL)-2, 11-3, II- 0 4, ll-δ, IL-6, IL-9, IL- 10, interferon (IFN)-)/, granulocyte-macrophage colony stimulating factor (GM-CSF), tumor necrosis factor (TNF)-σ, and TNF- ?) [Howard et a/. , "T-Cell-Derived Cytokines and Their Receptors, " In Fundamental Immunology, Third Edition, W. Paul, Ed., Raven Press: New York, pp. 763-800 (1 993)]; pro-inflammatory cytokines produced predominantly by macrophages δ (IL-1 , TNF, IL-6, IFN -σ, IFN- ?, platelet-derived growth factor (PDGF), and chemokines ~ IL-8, macrophage inflammatory protein (MIP)-1 σ, MIP-1/?, MIP-2, and macrophage chemotactic and activating factor (MCAF/MCP-1 ), RANTES, MGSA/GRO) [Durum and Oppenheim, "Proinflammatory Cytokines and Immunity," In Fundamental Immunology, Third Edition, W. Paul, Ed., Raven 0 Press: New York, pp. 801 -835 ( 1 993)]; and other cytokines (IL-1 0, IL-1 1 , IL-
1 2, etc.). As used herein, the term "cytokine" is inclusive of "lymphokine. "
The term "growth factor" refers to soluble intercellular signalling proteins that induce cell growth or differentiation, or both. Growth factors include, but are by no means limited to, erythropoietin (Epo), colony stimulating factor (CSF; GM- 5 CSF, G-CSF, M-CSF), nerve growth factor (NGF), epidermal growth factor (EGF), transforming growth factor (TGF)-σ, TGF- ?, fibroblast growth factor (FGF), growth hormone (GH), platelet-derived growth factor (PDGF), somatomedins, and the like [see generally Darnell et al. , Molecular Cell Biology, Scientific American Books/W.H. Freeman and Company: New York ( 1 986)].
0 The term "cytokine or growth factor receptor" refers to the receptor molecule specific for the cytokines and growth factors described herein. Receptors are
described in the references cited above, and are well known in the art.
The cytokines/growth factors and corresponding receptors described herein may be from any species of animal, preferably a species of mammal, and most preferably are human. Also contemplated are cytokines/growth factors and corresponding receptors from domestic animals, such as feline or canine sources, farm animals, such as but not limited to bovine, equine, caprine, ovine, and porcine sources, wild animals (whether in the wild or in a zoological garden), research animals, such as mice, rats, rabbits, goats, sheep, pigs, dogs, cats, etc., avian species, such as chickens, turkeys, songbirds, etc., i.e. , for veterinary medical use or in in vitro assay systems.
A "binding partner on another cell" is a receptor, cell adhesion molecule, or other integral membrane protein that is specifically recognized by a chosen extracellular domain of a chimeric receptor.
The term "cytoplasmic domain" is used herein to refer to the part of the chimeric receptor that is located in the cytoplasm of the cell, i.e. , inside the cell
This domain contains any Jak/Stat recognition sites, and is involved in signal transduction upon binding of the chimeric receptor to its ligand or binding partner on another cell. Synonyms for the term cytoplasmic domain used in this specification include "endodomam, " "intracellular domain, " "cyotsolic domain, " and "signal transduction domain " Cytoplasmic domains of the invention may be obtained from any cytokine receptor or growth factor receptor; preferably a Type I or Type II cytokine receptor. Specific embodiments, detailed herein, include the IFN--/R 1 cytoplasmic chain, the IFN- R2 cytoplasmic chain, EpoR cytoplasmic chain, and the CFRB4 cytoplasmic chain. Clearly, other cytoplasmic chains (i.e. , domains) from similar growth factor or cytokine receptors can be used as well, e.g. , IFN-αR, IFN- ?R, etc
The term "receptor complex" refers to the chimeric receptor, with or without accessory proteins - including other chimeric receptors — non-covalently associated in the cell membrane upon binding to ligand. Upon formation of a receptor complex, which may be a chimeric receptor homodimer or homo-
oligomer, e.g. , an EpoR/IFN- R1 homodimer (Example 3, infra); a heterodimer or hetero-oligomer comprising the chimeric receptor and an endogenous receptor complex protein, e.g. , IL- 10R/IFN-|/R 1 and CRFB4 (Example 3, infra); a heterodimer or hetero-oligomer comprising two different chimeric receptors, e.g. , EpoR/| R1 and EpoR/| R2 (Example 3, infra), and an apparent heterotetramer comprising two chains of H 1 /IFN-)/R 1 and two chains of L1 /IFN--/R2 forms (Example 4, infra).
The term "effector cell" as used herein refers to a cell that, upon activation, engages in some action, such as cell-mediated immunity, preferably by migrating to the site of a target cell or target tissue. Preferred effector cells of the invention include, but are by no means limited to, helper T cells [Fitch et al., "1- Cell-Mediated Immune Regulation," In Fundamental Immunology, Third Edition, W. Paul, Ed., Raven Press: New York, pp. 733-761 (1993)], cytolytic or cytocidal lymphocytes (including cytotoxic T cells, lymphokine activated killer (LAK) cells, and natural killer (NK) cells) [Berke, "The Functions and Mechanisms of Action of Cytolytic Lymphocytes, " In Fundamental Immunology, Third Edition, W. Paul, Ed., Raven Press: New York, pp. 965-1 014 ( 1 993)], phagocytic and inflammatory cells (including mononuclear phagocytes ~ macrophages and monocytes, and polymorphonuclear phagocytes - neutrophils, eosinophils, and basophils) [Greenberg and Silverstein, "Phagocytosis, " In Fundamental
Immunology, Third Edition, W. Paul, Ed., Raven Press: New York, pp. 941 -964 ( 1 993)] mast cells, granulocytes, etc.
The term "target cell" refers to a cell having a binding partner on the cell surface that is capable of recognition. Preferred target cells of the invention include tumor cells, virally infected cells, autoimmune cells, and inflammatory cells.
The term "responder cell" refers to a cell that is activated, e.g. , produces a soluble factor, such as a cytokine or lymphokine, proliferates, differentiates, transcribes a gene, engages in some activity in response to activation via a chimeric receptor. Examples of responder cells include, but are not limited to, animal cells, such as CHO, Rl.l, B-W, and L-M cells, African Green Monkey kidney cells (e.g. , COS 1 , COS 7, BSC 1 , BSC40, and BMT1 0), human cells
(such as HeLa), and hybrid cells (e.g. , 1 6-9 CHO/human hybrid cells) in tissue culture. Responder cells also include animal cells that express a chimeric receptor of the invention in vivo, e.g. , T cells or B cells that express a chimeric IL-2 receptor γc chain extracellular domain and an intracellular domain that would 5 recruit Tyk2, Jak1 , or Jak2, e.g. , CRFB4. Thus, any cell that normally responds to a cytokine or growth can be modified to respond to that cytokine or growth factor by an alternative activation pathway.
Antibody Extracellular Domains According to the invention, a monoclonal antibody to any molecule, such as but 0 not limited to a viral antigen, bacterial antigen, tumor antigen, etc., may be employed to provide a membrane immunoglobulin/single chain immunoglobulin cytoplasmic domain. The genes and/or cDNAs for the heavy and light chain corresponding to the desired hybπdomas are isolated and modified if desired. Modifications include humanization, point mutations, deletions, additions that δ yield improved properties such as changes in affinity or ease of expression.
Once the genes and/or cDNAs for the immunoglobulins are isolated, humanization can take place through the genetic engineering of the sequences encoding the MAbs. Humanization is an option, but may not be necessary for short term treatments. Furthermore, light and heavy chains from different 0 antibodies can be introduced into a single cell to modulate the properties of the new surface antibodies.
Various procedures known in the art may be used for the production of antibodies to a target antigen. For the production of antibody, various host animals can be immunized by injection with the target antigen, or a derivative δ (e.g. , fragment or fusion protein) thereof, including but not limited to rabbits, mice, rats, sheep, goats, etc. In one embodiment, the target antigen or fragment thereof can be conjugated to an immunogenic carrier, e.g. , bovine serum albumin (BSA) or keyhole limpet hemocyanin (KLH). Various adjuvants may be used to increase the immunological response, depending on the host 0 species, including but not limited to Freund's (complete and incomplete), mineral gels such as aluminum hydroxide, surface active substances such as lysolecithm, pluronic polyols, polyanions, peptides, oil emulsions, keyhole limpet
hemocyanms, dinitrophenol, and potentially useful human adjuvants such as BCG (baci/le Calmette-Guerm) and Corynebactenum parvυm.
For preparation of monoclonal antibodies using B cells generated by the foregoing immunization methods, any technique that provides for the production δ of antibody molecules by continuous cell lines in culture may be used. These include but are not limited to the hybπdoma technique originally developed by Kohler and Milstein Nature 256:495-497 ( 1975)], as well as the tπoma technique, the human B-cell hybπdoma technique [Kozbor et a/. , Immunology Today 4:72 1 983); Cote et al , Proc. Natl. Acad Sci. U.S.A. 80:2026-2030 0 (1983)], and the EBV-hybπdoma technique to produce human monoclonal antibodies [Cole et a/. , in Monoclonal Antibodies and Cancer Therapy, Alan R. Liss, Inc., pp. 77-96 ( 1 985)]. In an additional embodiment of the invention, monoclonal antibodies can be produced in germ-free animals utilizing recent technology [PCT/US90/02646]. According to the invention, techniques 6 described for the production of single chain antibodies [U.S. Patent Nos.
6,476,786 and 6, 1 32,405 to Huston; U.S. Patent 4,946,778] can be adapted to produce target antigen-specific single chain antibodies. An additional embodiment of the invention utilizes the techniques described for the construction of Fab expression libraries [Huse et al. , Science 246: 1 275-1 281 0 ( 1 989)] to allow rapid and easy identification of monoclonal Fab fragments with the desired specificity for an target antigen, or its derivatives, or analogs.
It is possible to introduce the heavy and light chain as a single chain antibody construct (SCA). In this case, the intracellular domain will be coupled to signal transduction in two ways. In one case, the SCA will be coupled to both Hu-IFN- δ |/R1 and Hu-IFN-(/R2 intracellular domains; both constructs will be co-infected into cells. Intracellular domains of other receptors that require the aggregation of two JAK kinases and subsequent STAT proteins can also be used. In the second case, the intracellular domain will be chosen from among single chain receptors such as EGF and EPO. The this construct only a single chain needs to 0 be expressed in the cells by infecting with only one retroviral construct.
In the production of antibodies, screening for the desired antibody can be
accomplished by techniques known in the art, e.g , radioimmunoassay, ELISA (enzyme-linked immunosorbant assay), "sandwich" immunoassays, immunoradiometπc assays, gel diffusion precipitin reactions, immunodiffusion assays, in situ immunoassays (using colloidal gold, enzyme or radioisotope labels, for example), western blots, precipitation reactions, agglutination assays
(e.g. , gel agglutination assays, hemagglutination assays), complement fixation assays, immunofluorescence assays, protein A assays, and immunoeiectrophoresis assays, etc. In one embodiment, antibody binding is detected by detecting a label on the primary antibody. In another embodiment, the primary antibody is detected by detecting binding of a secondary antibody or reagent to the primary antibody. In a further embodiment, the secondary antibody is labeled. Many means are known in the art for detecting binding in an immunoassay and are within the scope of the present invention. For example, to select antibodies which recognize a specific epitope of an target antigen, one may assay generated hybπdomas for a product which binds to an target antigen fragment containing such epitope For selection of an antibody specific to an target antigen from a particular species of animal, one can select on the basis of positive binding with target antigen expressed by or isolated from cells of that species of animal
Cytokine and Growth Factor Receptor Extracellular Domains
As described above, the ligand binding portion of a cytokine or growth factor receptor extracellular domain can be used as the extracellular domain of a chimeric receptor of the invention. Examples of cytokine and growth factor receptors are described above. The methods for isolating the extracellular domains are routine in the art, such as PCR amplification of the region coding for such receptor, specific endonuclease cleavage (perhaps after introduction of the endonuclease cleavage site by site directed mutagenesis or other techniques), and gene synthesis The molecular biological manipulations are described in greater detail, infra, and are exemplified in the Examples.
Cytokine and Growth Factor Extracellular Domains
A particularly interesting feature of the present invention is that is allows targeting of cells that express a chimeric receptor to cells that express a
cytokine or growth factor receptor using the corresponding cytokine or growth factor. This aspect of the invention advantageously provides for highly specific targeting, which is not dependent on generating a receptor-specific antibody. The cytoplasmic domain of a chimeric receptor of this aspect of the invention may be generated from the full length cytokine or growth factor, or the receptor binding fragment thereof. Examples of cytokines and growth factors suitable for use according to the invention are provided supra.
Genetically Engineered Genes for Chimeric Receptors Preparation of Expression Vectors for Synthetic Receptors. The chimeric receptor consists of two parts: the ectodomam targeting a specific antigen or hapten; the intracellular domain of the specific cytokine (e.g. , interferon), growth factor, or other ligand. Furthermore, combinations of the cytoplasmic domain from one cytokine can be mixed with that from another. The synthetic cell surface receptor provides the targeting domain; the internal domains provide the polypeptides that activate the desired signal transduction mechanisms. By using intracellular domains from different cytokines, novel new signal transduction mechanisms can be obtained. In one embodiment, the first chain (ligand- binding; Hu-IFN-) R1 ) and second (accessory factor 1 , AF- 1 ; Hu-IFN-)/R2) chain of the human IFN-|/R complex as the intracellular components are used. A variety of retroviral vectors or simple plasmid vectors can be used for these purposes as well as many other eukaryotic viral and non-viral based vectors. The requirement for useable final constructs is that the synthetic receptor chains are expressed on the cell surface of transfected or infected cells.
In accordance with the present invention there may be employed conventional molecular biology, microbiology, and recombinant DNA techniques within the skill of the art. Such techniques are explained fully in the literature. See, e.g. , Sambrook, Fπtsch & Maniatis, Molecular Cloning A Laboratory Manual, Second Edition ( 1 989) Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York (herein "Sambrook et al. , 1 989"); DNA Cloning: A Practical Approach, Volumes I and II (D.N. Glover ed. 1 986); Oligonucleotide Synthesis (M.J. Gait ed. 1 984); Nucleic Acid Hybridization [B.D. Hames & S.J. Higgins eds. ( 1 985)], Transcription And Translation [B.D. Hames & S.J. Higgins, eds. (1984)]; Animal
Cell Culture [R.I. Freshney, ed. ( 1 986)]; Immobilized Cells And Enzymes [IRL Press, ( 1 986)]; B. Perbal, A Practical Guide To Molecular Cloning (1 984); F.M. Ausubel et al. (eds.), Current Protocols in Molecular Biology, John Wiley & Sons, Inc. (1 994) .
δ Therefore, if appearing herein, the following terms shall have the definitions set out below.
A "vector" is a replicon, such as plasmid, phage or cosmid, to which another DNA segment may be attached so as to bring about the replication of the attached segment. A "replicon" is any genetic element (e.g. , plasmid, 0 chromosome, virus) that functions as an autonomous unit of DNA replication in vivo, i.e. , capable of replication under its own control.
A "cassette" refers to a segment of DNA that can be inserted into a vector at specific restriction sites. The segment of DNA encodes a polypeptide of interest, and the cassette and restriction sites are designed to ensure insertion 6 of the cassette in the proper reading frame for transcription and translation.
Cassettes of the invention may provide an insertion site for DNA encoding an extracellular domain in reading frame with a coding region for the transmembrane domain and a cytoplasmic domain; an insertion site for a DNA encoding an extracellular domain and transmembrane domain in reading frame 0 with a cytoplasmic domain; a coding region for an extracellular domain and a transmembrane domain with an insertion site in reading frame for a cytoplasmic domain; or a coding region for an extracellular domain with a cassette insertion site in reading frame for a transmembrane domain and a cytoplasmic domain. In the first two cassette constructs, a specific cell signal pathway can be used δ with a multiplicity of ligand/bmding partner specificities. In the second pair of cassette constructions, the ligand/bindmg partner specificity will be constant, with different intracellular signal pathways employed. In still another embodiment, a cassette insertion site can receive a construct encoding the extracellular-transmembrane-cytoplasmic domains. In still another embodiment, 0 two cassette insertion sites can be provided: one δ' to a transmembrane coding region for DNA encoding an extracellular domain, the other 3' to the
transmembrane coding region for DNA encoding the cytoplasmic domain. The cassette vector may include a signal sequence (see infra) δ' to the site for the extracellular domain, or a signal sequence may be inserted. It should be noted that the arrangement of coding regions for specific domains will ordinarily be δ δ'-signal sequence-extracellular-transmembrane-cytoplasmιc-3', which will provide for the proper orientation upon expression as discussed below in connection with "signal sequences."
The present invention generally concerns introduction of a nucleic acid molecule, preferably and expression vector, into a cell, whether by transfection, 0 transduction, or transformation (which terms are frequently, if improperly, used interchangeably in the art). A cell has been "transfected" by exogenous or heterologous DNA when such DNA has been introduced inside the cell. A cell has been "transformed" by exogenous or heterologous DNA when the transfected DNA effects a phenotypic change. A cells has been "transduced" δ by heterologous DNA when the DNA recombinantly inserts in a chromosome
Preferably, the transforming DNA should be integrated (covalently linked) into chromosomal DNA making up the genome of the cell, i.e , transduced in the cell
"Heterologous" DNA refers to DNA not naturally located in the cell, or in a chromosomal site of the cell. According to the invention, DNA encoding a 0 chimeric receptor, which does not naturally occur in the cell, is heterologous
DNA. Another common synonym for heterologous DNA is "exogenous" DNA.
A "nucleic acid molecule" refers to the phosphate ester polymeric form of πbonucleosides (adenosme, guanosme, undine or cytidine; "RNA molecules") or deoxyπbonucleosides (deoxyadenosine, deoxyguanosine, deoxythymidine, or δ deoxycytidine; "DNA molecules"), or any phosphoester anologs thereof, such as phosphorothioates and thioesters, in either single stranded form, or a double- stranded helix. Double stranded DNA-DNA, DNA-RNA and RNA-RNA helices are possible. The term nucleic acid molecule, and in particular DNA or RNA molecule, refers only to the primary and secondary structure of the molecule, 0 and does not limit it to any particular tertiary forms. Thus, this term includes
double-stranded DNA found, inter alia, in linear or circular DNA molecules (e.g. , restriction fragments), plasmids, and chromosomes. In discussing the structure of particular double-stranded DNA molecules, sequences may be described herein according to the normal convention of giving only the sequence in the 5' to 3' direction along the nontranscribed strand of DNA (i.e., the strand having a sequence homologous to the mRNA). A "recombinant DNA molecule" is a DNA molecule that has undergone a molecular biological manipulation.
A nucleic acid molecule is "hybridizable" to another nucleic acid molecule, such as a cDNA, genomic DNA, or RNA, when a single stranded form of the nucleic acid molecule can anneal to the other nucleic acid molecule under the appropriate conditions of temperature and solution ionic strength (see Sambrook et al. , supra). The conditions of temperature and ionic strength determine the "stringency" of the hybridization. For preliminary screening for homologous nucleic acids, low stringency hybridization conditions, corresponding to a Tm of 56 °, can be used, e.g. , δx SSC, 0.1 % SDS, 0.26 % milk, and no formamide; or
30% formamide, 5x SSC, 0.5 % SDS). Moderate stringency hybridization conditions correspond to a higher Tm, e.g. , 40% formamide, with 5x or 6x SCC. High stringency hybridization conditions correspond to the highest Tm, e.g. , 60% formamide, 5x or 6x SCC. Hybridization requires that the two nucleic acids contain complementary sequences, although depending on the stringency of the hybridization, mismatches between bases are possible. The appropriate stringency for hybridizing nucleic acids depends on the length of the nucleic acids and the degree of complementation, variables well known in the art. The greater the degree of similarity or homology between two nucleotide sequences, the greater the value of Tm for hybrids of nucleic acids having those sequences.
The relative stability (corresponding to higher Tm) of nucleic acid hybridizations decreases in the following order: RNA:RNA, DNA:RNA, DNA:DNA. For hybrids of greater than 100 nucleotides in length, equations for calculating Tm have been derived (see Sambrook et al., supra, 9.50-0.61 ). For hybridization with shorter nucleic acids, i.e. , ohgonucleotides, the position of mismatches becomes more important, and the length of the oligonucleotide determines its specificity (see Sambrook et al. , supra, 1 1 .7-1 1 .8). Preferably a minimum length for a hybridizable nucleic acid is at least about 10 nucleotides; preferably at least
about 1 5 nucleotides; and more preferably the length is at least about 20 nucleotides.
"Homologous recombination" refers to the insertion of a foreign DNA sequence of a vector in a chromosome. Preferably, the vector targets a specific chromosomal site for homologous recombination. For specific homologous recombination, the vector will contain sufficiently long regions of homology to sequences of the chromosome to allow complementary binding and incorporation of the vector into the chromosome. Longer regions of homology, and greater degrees of sequence similarity, may increase the efficiency of homologous recombination.
A DNA "coding sequence" is a double-stranded DNA sequence which is transcribed and translated into a polypeptide in a cell in vitro or in vivo when placed under the control of appropriate regulatory sequences. The boundaries of the coding sequence are determined by a start codon at the 5 ' (amino) terminus and a translation stop codon at the 3 ' (carboxyl) terminus. A coding sequence can include, but is not limited to, prokaryotic sequences, cDNA from eukaryotic mRNA, genomic DNA sequences from eukaryotic (e.g. , mammalian) DNA, and even synthetic DNA sequences. If the coding sequence is intended for expression in a eukaryotic cell, a polyadenylation signal and transcription termination sequence will usually be located 3' to the coding sequence.
Transcriptional and translational control sequences are DNA regulatory sequences, such as promoters, enhancers, terminators, and the like, that provide for the expression of a coding sequence in a host cell. In eukaryotic cells, polyadenylation signals are control sequences.
A "promoter sequence" is a DNA regulatory region capable of binding RNA polymerase in a cell and initiating transcription of a downstream (3' direction) coding sequence. For purposes of defining the present invention, the promoter sequence is bounded at its 3 ' terminus by the transcription initiation site and extends upstream (δ ' direction) to include the minimum number of bases or elements necessary to initiate transcription at levels detectable above
background. Within the promoter sequence will be found a transcription initiation site (conveniently defined for example, by mapping with nuclease S1 ), as well as protein binding domains (consensus sequences) responsible for the binding of RNA polymerase.
A coding sequence is "under the control of," "operably associated with, " or
"operationally associated with" transcriptional and translational control sequences in a ceil when RNA polymerase transcribes the coding sequence into mRNA, which is then trans-RNA spliced and translated into the protein encoded by the coding sequence.
A "signal sequence" is included at the beginning (δ') of the coding sequence of a protein to be expressed on the surface of a cell or secreted for a cell. This sequence encodes a signal peptide, N-terminal to the mature polypeptide, that directs the host cell to translocate the polypeptide. The term "translocation signal sequence" is used herein to refer to this sort of signal sequence. Translocation signal sequences can be found associated with a variety of proteins native to eukaryotes and prokaryotes, and are often functional in both types of organisms. According to the invention, an expression vector providing for expression of a chimeric receptor will include a signal sequence δ' to the region coding for the extracellular domain, in reading frame therewith. Usually, the signal peptide encoded by the signal sequence is cleaved upon translation of the mRNA and translocation of the expressed protein, resulting in the mature protein.
As used herein, the term "sequence homology" in all its grammatical forms refers to the relationship between proteins that possess a "common evolutionary origin, " including proteins from superfamihes (e.g , the immunoglobulin superfamily) and homologous proteins from different species (e.g. , myosin light chain, etc.) (Reeck et al , 1 987, Cell 60:667).
Accordingly, the term "sequence similarity" in all its grammatical forms refers to the degree of identity or correspondence between nucleic acid or ammo acid sequences of proteins that do not share a common evolutionary origin (see
Reeck et a/. , supra). However, in common usage and in the instant application, the term "homologous," when modified with an adverb such as "highly," may refer to sequence similarity and not a common evolutionary origin.
In a specific embodiment, two DNA sequences are "substantially homologous" or "substantially similar" when at least about 60% (preferably at least about
76%, and most preferably at least about 90 or 95%) of the nucleotides match over the defined length of the DNA sequences. Sequences that are substantially homologous can be identified by comparing the sequences using standard software available in sequence data banks, or in a Southern hybridization experiment under, for example, stringent conditions as defined for that particular system. Defining appropriate hybridization conditions is within the skill of the art. See, e.g., Maniatis et al., supra; DNA Cloning, Vols. I & II, supra; Nucleic Acid Hybridization, supra.
Similarly, in a particular embodiment, two ammo acid sequences are "substantially homologous" or "substantially similar" when greater than 30% of the ammo acids are identical, or greater than about 60% are similar (functionally identical) . Preferably, the similar or homologous sequences are identified by alignment using, for example, the GCG (Genetics Computer Group, Program Manual for the GCG Package, Version 7, Madison, Wisconsin) pileup program.
The term "corresponding to" is used herein to refer similar or homologous sequences, whether the exact position is identical or different from the molecule to which the similarity or homology is measured Thus, the term "corresponding to" refers to the sequence similarity, and not the numbering of the ammo acid residues or nucleotide bases.
Genes encoding a chimeric receptor, can be prepared using standard genetic engineering techniques, using starting materials (the extracellular domain and cytoplasmic domain) isolated from any source, particularly from a human cDNA or genomic library. Methods for obtaining such genes are well known in the art, as described above (see, e.g. , Sambrook et al. , 1 989, supra), as are the sources for the native genes or recombinantly derived versions thereof. Accordingly, any
animal cell potentially can serve as the nucleic acid source for the molecular cloning of these genes. The DNA may be obtained by standard procedures known in the art from cloned DNA (e.g., a DNA "library"), and preferably is obtained from a cDNA library prepared from tissues with high level expression of the protein, by chemical synthesis, by cDNA cloning, or by the cloning of genomic DNA, or fragments thereof, purified from the desired cell (See, for example, Sambrook et al , 1 989, supra; Glover, D.M. (ed.), 1 985, DNA Cloning: A Practical Approach, MRL Press, Ltd., Oxford, U.K. Vol. I, II). Clones derived from genomic DNA may contain regulatory and intron DNA regions in addition to coding regions; clones derived from cDNA will not contain intron sequences.
Whatever the source, the gene should be molecularly cloned into a suitable vector for propagation of the gene.
The present invention also relates to genes encoding analogs and derivatives of the extracellular domains and cytoplasmic domains of the invention, that have the same or homologous functional activity as the native proteins, and homologs thereof from other species. The production and use of derivatives and analogs related to these protein components of a functional chimeric receptor are within the scope of the present invention. In a specific embodiment, the derivative or analog is functionally active, i.e. , capable of exhibiting one or more functional activities, such as but not limited to, activation of a Jak kinase or Stat protein
Derivatives of the extracellular domain or cytoplasmic domain can be made by altering encoding nucleic acid sequences of the component proteins by substitutions, additions or deletions that provide for functionally equivalent molecules. Preferably, derivatives are made that have enhanced or increased functional activity relative to native receptor molecules.
Due to the degeneracy of nucleotide coding sequences, other DNA sequences which encode substantially the same ammo acid sequence as native genes for extracellular and cytoplasmic domains may be used in the practice of the present invention. These include but are not limited to allelic genes, homologous genes from other species, and nucleotide sequences comprising all or portions of the genes which are altered by the substitution of different codons that encode the
same ammo acid residue within the sequence, thus producing a silent change. Altered sequences in which functionally equivalent am o acid residues are substituted for residues within the sequence resulting in a conservative ammo acid substitution, are contemplated. For example, one or more ammo acid residues within the sequence can be substituted by another ammo acid of a similar polarity, which acts as a functional equivalent, resulting in a silent alteration. Substitutes for an am o acid within the sequence may be selected from other members of the class to which the ammo acid belongs. For example, the nonpolar (hydrophobic) am o acids include alanine, leucine, isoleucme, valme, prohne, phenylalanine, tryptophan and methionme. Ammo acids containing aromatic ring structures are phenylalanine, tryptophan, and tyrosme The polar neutral ammo acids include glycine, serine, threonine, cysteine, tyrosme, asparagine, and glutamme. The positively charged (basic) ammo acids include arginine, lysine and histidine. The negatively charged (acidic) ammo acids include aspartic acid and glutamic acid. Such alterations will not be expected to affect apparent molecular weight as determined by polyacrylamide gel electrophoresis, or isoelectπc point.
Particularly preferred substitutions are.
- Lys for Arg and vice versa such that a positive charge may be maintained; - Glu for Asp and vice versa such that a negative charge may be maintained;
- Ser for Thr such that a free -OH can be maintained; and
- Gin for Asn such that a free NH2 can be maintained.
Other preferred substitutions are with divergent am o acid residues in homologous proteins from other species.
Ammo acid substitutions may also be introduced to substitute an ammo acid with a particularly preferable property. For example, a Cys may be introduced a potential site for disulfide bridges with another Cys. A His may be introduced as a particularly "catalytic" site (i.e. , His can act as an acid or base and is the most common ammo acid in biochemical catalysis). Pro may be introduced because of its particularly planar structure, which induces ?-turns in the protein's structure.
Additionally, a nucleic acid sequence can be mutated in vitro or in vivo, to create and/or destroy translation, initiation, and/or termination sequences, or to create variations in coding regions and/or form new restriction endonuclease sites or destroy preexisting ones, to facilitate further in vitro modification. Indeed, such mutations are required to create the chimeric receptor encoding nucleic acid constructs of the invention. Preferably, such mutations enhance the functional activity of the mutated gene product. Any technique for mutagenesis known in the art can be used, including but not limited to, in vitro site-directed mutagenesis (Hutchmson, C, et al., 1 978, J. Biol. Chem. 263:6561 ; Zoller and Smith, 1 984, DNA 3:479-488; Oliphant et al. , 1 986, Gene 44: 1 77; Hutchmson et al. , 1 986, Proc. Natl. Acad. Sci. U.S.A. 83:71 0), use of TAB® linkers (Pharmacia), etc. PCR techniques are preferred for site directed mutagenesis (see Higuchi, 1 989, "Using PCR to Engineer DNA" , in PCR Technology: Principles and Applications for DNA Amplification, H. Erlich, ed., Stockton Press, Chapter 6, pp. 61 -70).
Using the DNA encoding extracellular and cytoplasmic domains selected for the chimeric receptor, the specific domains are isolated as described above and joined together using standard genetic engineering techniques. Examples of these techniques are provided in the Examples, infra. Generally, the desired region for the extracellular domain or the cytoplasmic domain is amplified using
PCR, cloned, and inserted in an expression vector construct in correct reading frame with other components of the chimeric receptor. PCR, endonuclease cleavage, and insertion of DNA in vectors are all well established, routine techniques that require no further elaboration here.
The gene encoding a chimeric receptor can then be inserted into an appropriate cloning vector. A large number of vector-host systems known in the art may be used. Possible vectors include, but are not limited to, plasmids or modified viruses, but the vector system must be compatible with the host cell used. Examples of vectors include, but are not limited to, E. coli, bacteπophages such as lambda derivatives, or plasmids such as pBR322 derivatives or pUC plasmid derivatives, e.g. , pGEX vectors, pmal-c, pFLAG, etc. The insertion into a cloning vector can, for example, be accomplished by hgating the DNA fragment into a
cloning vector which has complementary cohesive termini. However, if the complementary restriction sites used to fragment the DNA are not present in the cloning vector, the ends of the DNA molecules may be enzymatically modified. Alternatively, any site desired may be produced by ligatmg nucleotide sequences (linkers) onto the DNA termini; these ligated linkers may comprise specific chemically synthesized o gonucleotides encoding restriction endonuclease recognition sequences. Recombinant molecules can be introduced into host cells via transformation, transfection, infection, electroporation, etc., so that many copies of the gene sequence are generated Preferably, the cloned gene is contained on a shuttle vector plasmid, which provides for expansion in a cloning cell, e.g., E. coli, and facile purification for subsequent insertion into an appropriate expression cell line, if such is desired For example, a shuttle vector, which is a vector that can replicate in more than one type of organism, can be prepared for replication in both E. coli and Saccharomyces cerevisiae by linking sequences from an E coli plasmid with sequences form the yeast 2μ plasmid.
Restriction endonuclease sites may be created in the cloning vector to provide for easy excision of the coding sequence for insertion in an expression vector.
The nucleic acid, preferably DNA, molecules coding for the chimeric receptor can be inserted into one or more appropriate expression vector(s), i.e , a vector which contains the necessary elements for the transcription and translation of the inserted protein-coding sequence. Such elements are termed herein a "promoter. " Thus, the nucleic acids encoding a chimeric receptor of the invention are operationally associated with a promoter in an expression vector or vectors of the invention. Both cDNA and genomic sequences can be cloned and expressed under control of such regulatory sequences. An expression vector also preferably includes a replication origin.
The necessary transcriptional and translational signals can be provided on a recombinant expression vector, or they may be supplied by the native gene encoding the extracellular domain, the cytoplasmic domain, and/or its flanking regions. Alternatively, a heterologous promoter, preferably one that enhances expression in the host cell, is used
The expression elements of vectors vary in their strengths and specificities. Depending on the host-vector system utilized, any one of a number of suitable transcription and translation elements may be used.
Genetically Engineered Cells That Express a Chimeric Receptor According to the invention, an expression vector or vectors that provide for expression of one or more chimeric receptor(s) are introduced into cells of an animal, preferably mammal, e.g. , by transfection in vitro or in vitro. Such cells can be used in vitro for identification of agonists and antagonists the extracellular domain of the chimeric receptor, where cellular activation will not proceed with the native receptor having that extracellular domain.
The cell into which the recombinant vector or vectors comprising the nucleic acid encoding the chimeric receptor is cultured in an appropriate cell culture medium under conditions that provide for expression of the chimeric receptor and formation of a functional chimeric receptor complex by the cell. In a specific embodiment, infra, the cell is an African Green Monkey kidney COS-1 cell. Other appropriate cells include, but are not limited to, Chinese hamster ovary (CHO) cells; RU, B-W and L-M cells; other African Green Monkey kidney cells (e.g. , COS 7, BSC1 , BSC40, and BMT10); murine fibroblast NIH-3T3 cells; and human cell lines such as HeLa, 2fTGH cells, HEp-2, and human kidney 293 cells; and other cells routinely used in in vitro cultures, i.e. , for which optimal culture conditions have been established. In an alternative embodiment, the present invention further provides for introducing the recombinant vector or vectors that provide for expression of a functional chimeric receptor complex into primary cells that either lack a functional receptor complex, or lack expression of a particular species of a functional Jak or Stat protein.
Any of the methods for the insertion of DNA fragments into a vector may be used to construct expression vectors containing a gene consisting of appropriate transcπptional/translational control signals and the protein coding sequences. These methods may include in vitro recombinant DNA and synthetic techniques and in vivo recombination (genetic recombination).
Expression of a chimeric receptor may be controlled by any promoter/enhancer element known in the art, but these regulatory elements must be functional in the host selected for expression Promoters which may be used to control gene expression include, but are not limited to, the SV40 early promoter region (Benoist and Chambon, 1981, Nature 290:304-310), the promoter contained in the 3' long terminal repeat of Rous sarcoma virus (Yamamoto, et al., 1980, Cell 22:787-797), the herpes thymidine kinase promoter (Wagner et al., 1981, Proc. Natl. Acad. Sci. U.S.A.78:1441-1445), the regulatory sequences of the metallothionein gene (Bπnster et al., 1982, Nature 296:39-42); and animal transcriptional control regions, which exhibit tissue specificity and have been utilized in transgenic and are useful for gene therapy applications: elastase I gene control region which is active in pancreatic acinar cells (Swift et al, 1984, Cell 38:639-646; Ornitz etal., 1986, Cold Spring Harbor Symp. Quant. Biol. 50:399-409; MacDonald, 1987, Hepatology 7:425-515); insulin gene control region which is active in pancreatic beta cells (Hanahan, 1985, Nature 315:115-
122), immunoglobulin gene control region which is active in lymphoid cells (Grosschedl etal, 1984, Cell 38:647-658; Adames et al, 1985, Nature 318:533-538; Alexander etal, 1987, Mol. Cell. Biol.7:1436-1444), mouse mammary tumor virus control region which is active in testicular, breast, lymphoid and mast cells (Leder et al, 1986, Cell 45:485-495), albumin gene control region which is active in liver (Pmkert et al , 1987, Genes and Devel 1:268-276), alpha-fetoprotem gene control region which is active in liver (Krumlauf etal., 1985, Mol. Cell. Biol.5:1639-1648; Hammer etal., 1987, Science 235:53-58), alpha -antιtrypsιn gene control region which is active in the liver (Kelsey et al , 1987, Genes and Devel. 1.161-171), beta globin gene control region which is active in myeloid cells (Mogram etal, 1985, Nature 315:338-340; Kollias et al, 1986, Cell 46:89-94), myelin basic protein gene control region which is active in oligodendrocyte cells in the brain (Readhead et al, 1987, Cell 48:703-712), myosm light chaιn-2 gene control region which is active in skeletal muscle (Sani, 1985, Nature 314.283-286), and gonadotropic releasing hormone gene control region which is active in the hypothalamus (Mason eta/., 1986, Science 234:1372-1378). In a specific embodiment, infra, the genes encoding both IL-1 OR chain and CRFB4 are under control of the powerful promoter of human elongation factor 1σ [Mizushima and Nagata, Nuci
Acids Res. 18:6322 ( 1 990)].
Mammalian expression vectors contemplated for use in the invention include vectors with inducible promoters, such as the dihydrofolate reductase (DHFR) promoter, e.g. , any expression vector with a DHFR expression vector, or a DH/Wmethotrexate co-amplification vector, such as pED (Pst\, Sa , Sba\, Sma\, and £coRI cloning site, with the vector expressing both the cloned gene and DHFR; see Kaufman, Current Protocols in Molecular Biology, 1 6: 1 2 (1 991 ). Alternatively, a glutamine synthetase/methionine suifoximine co-amplification vector, such as pEE 1 4 (Hιnd\\\, Xba\, Smal, Sbal, EcoRl, and Bell cloning site, in which the vector expresses glutamine synthase and the cloned gene; Celltech).
In another embodiment, a vector that directs episomal expression under control of Epstein Barr Virus (EBV) can be used, such as pREP4 (Bam λ , Sfi , Xhol, Notl, Nhel, Hindlll, Nhel, Pvull, and Kpn cloning site, constitutive RSV-LTR promoter, hygromycin selectable marker; Invitrogen), pCEP4 (βamH I , Sfil, Xhol, Notl, Nhel, Hindlll, Nhel, Pvull, and Kpnl cloning site, constitutive hCMV immediate early gene, hygromycin selectable marker; Invitrogen), pMEP4 (Kpnl, Pvul, Nhel, Hindlll, Notl, Xhol, Sfil, BamH l cloning site, inducible methallothionem Ha gene promoter, hygromycin selectable marker: Invitrogen), pREP8 (BamH l , Xhol, Notl, Hindlll, Nhel, and Kpnl cloning site, RSV-LTR promoter, histidinol selectable marker; Invitrogen), pREP9 (Kpnl, Nhel, Hindlll,
Notl, Xhol, Sfil, and BamHl cloning site, RSV-LTR promoter, G41 8 selectable marker; Invitrogen), and pEBVHis (RSV-LTR promoter, hygromycin selectable marker, N-termmal peptide puπfiable via ProBond resin and cleaved by enterokinase; Invitrogen). Selectable mammalian expression vectors for use in the invention include pRc/CMV (Hindlll, BstXl, Notl, Sbal, and Apal cloning site,
G418 selection; Invitrogen), pRc/RSV (Hindlll, Spe , BstXl, Notl, Xbal cloning site, G41 8 selection; Invitrogen), and others. Vaccinia virus mammalian expression vectors (see, Kaufman, 1 991 , supra) for use according to the invention include but are not limited to pSC1 1 (Smal cloning site, TK- and /?-gal selection), pMJ601 (Sa/1, Smal, Afl , Narl, BspWl, BamHl, Apal, Nhel, Sacll,
Kpnl, and Hindlll cloning site; TK- and /?-gal selection), and pTKgptFI S (EcoRl, Pstl, Sail, Accl, Hmd l, Sbal, BamHl, and Hpa cloning site, TK or XPRT selection) .
In a specific embodiment, a phosphorylatable form of the chimeric receptor can be expressed [See European Patent No. 0372707 by Sidney Pestka], e.g. , by using plasmid pGEX-TTK (Pharmacia, product no. 27-45-8701 ).
In addition, a host cell strain may be chosen which modulates the expression of the inserted sequences, or modifies and processes the gene product in the specific fashion desired. Different host cells have characteristic and specific mechanisms for the translational and post-translational processing and modification (e.g., glycosylation, cleavage [e.g. , of signal sequence]) of proteins Appropriate cell lines or host systems can be chosen to ensure the desired modification and processing of the foreign protein expressed. Expression in eukaryotic cells can increase the likelihood of "native" glycosylation and folding of a heterologous protein Moreover, expression in mammalian cells can provide a tool for evaluating chimeric receptor activity Furthermore, different vector/host expression systems may affect processing reactions, such as proteolytic cleavages, to a different extent.
Vectors are introduced into the desired host cells by methods known in the art, e.g. , transfection, electroporation, microinjection, transduction, cell fusion, DEAE dextran, calcium phosphate precipitation, lipofection (lysosome fusion), use of a gene gun, or a DNA vector transporter (see, e.g. , Wu et al , 1 992, J. Biol. Chem. 267:963-967; Wu and Wu, 1 988, J Biol. Chem. 263: 14621 -
1 4624; Hartmut et al , Canadian Patent Application No. 2,01 2,31 1 , filed March 1 5, 1 990).
Gene Therapy and Transqenic Vectors In one embodiment, a gene encoding a chimeric receptor is introduced in vivo in a viral vector. Such vectors include an attenuated or defective DNA virus, such as but not limited to herpes simplex virus (HSV), papillomavirus, Epstein Barr virus (EBV), adenovirus, adeno-associated virus (AAV), and the like. Defective viruses, which entirely or almost entirely lack viral genes, are preferred. Defective virus is not infective after introduction into a cell. Use of defective viral vectors allows for administration to cells in a specific, localized area, without concern that the vector can infect other cells. Thus, adipose tissue can
be specifically targeted. Examples of particular vectors include, but are not limited to, a defective herpes virus 1 (HSV1) vector [Kaplitt et al, Molec. Cell. Neurosci.2:320-330 (1991)], an attenuated adenovirus vector, such as the vector described by Stratford-Perπcaudet et a [J. Clin. Invest. 90:626-630 (1992)], and a defective adeno-associated virus vector [Samulski et al, J. Virol.
61:3096-3101 (1987); Samulski etal., J. Virol.63:3822-3828 (1989)].
Preferably, for in vivo administration, an appropriate immunosuppressive treatment is employed in conjunction with the viral vector, e.g., adenovirus vector, to avoid immuno-deactivation of the viral vector and transfected cells. For example, immunosuppressive cytokines, such as ιnterleukιn-12 (IL-12), interferon-)/ (IFN-)/), ιnterleukιn-10 (IL-10), or antι-CD4 antibody, can be administered to block humoral or cellular immune responses to the viral vectors [see, e.g., Wilson, Nature Medicine (1995)]. In a further embodiment, the vector can be engineered to express such immunosuppressive cytokines. In addition, it is advantageous to employ a viral vector that is engineered to express a minimal number of antigens.
In another embodiment the gene can be introduced in a retroviral vector, e.g., as described in Anderson etal, U.S. Patent No.5,399,346; Mann etal, Cell 33:163 (1983); Temin ta/., U.S. Patent No.4,650,764; Temin ta/., U.S. Patent No.4,980,289, Markowitz etal., J. Virol 62:1120 (1988); Temm et al,
U.S. Patent No. 5,124,263; International Patent Publication No. WO 95/07358, published March 16, 1995, by Dougherty etal., and Kuo et al., Blood 82:845 (1993).
Targeted gene delivery is described in International Patent Publication WO 95/28494, published October 1995.
Alternatively, the vector can be introduced in vivo by lipofection. For the past decade, there has been increasing use of liposomes for encapsulation and transfection of nucleic acids in vitro. Synthetic cationic lipids designed to limit the difficulties and dangers encountered with hposome mediated transfection can be used to prepare liposomes for in vivo transfection of a gene encoding a
marker [Feigner, et. al., Proc. Natl. Acad. Sci. U.S.A. 84:741 3-741 7 (1 987); see Mackey, et al , Proc. Natl. Acad. Sci. U.S.A. 85:8027-8031 ( 1 988)]. The use of cationic lipids may promote encapsulation of negatively charged nucleic acids, and also promote fusion with negatively charged cell membranes [Feigner and Rmgold, Science 337:387-388 ( 1 989)]. The use of lipofection to introduce exogenous genes into the specific organs in vivo has certain practical advantages. Molecular targeting of liposomes to specific cells represents one area of benefit. It is clear that directing transfection to particular cell types would be particularly advantageous in a tissue with cellular heterogeneity, such as pancreas, liver, kidney, and the brain. Lipids may be chemically coupled to other molecules for the purpose of targeting [see Mackey, et. al., supra]. Targeted peptides, e.g. , hormones or neurotransmitters, and proteins such as antibodies, or non-peptide molecules could be coupled to liposomes chemically.
It is also possible to introduce the vector in vivo as a naked DNA plasmid. Naked DNA vectors for gene therapy can be introduced into the desired host cells by methods known in the art, e.g. , transfection, electroporation, microinjection, transduction, cell fusion, DEAE dextran, calcium phosphate precipitation, use of a gene gun, or use of a DNA vector transporter [see, e.g., Wu et al , J. Bio Chem. 267:963-967 ( 1 992); Wu and Wu, J. Biol. Chem. 263: 14621 -14624 ( 1 988); Hartmut et al , Canadian Patent Application No.
2,01 2,31 1 , filed March 1 δ, 1 990].
In Vitro Assay Systems As discussed above, and exemplified below (Examples 1 and 3), the chimeric receptors of the present invention are valuable tools for probing cellular responses to cytokines, growth factors, and other molecules by dissecting the signal transduction components of the receptor; by identifying the specificity or degeneracy of different Jak and Stat activation pathways; and by developing new cell targets for drug discovery programs by allowing for activation of a particular, high sensitivity signal transduction pathway with any ligand or binding partner of interest.
Thus, in a particular aspect, the present invention advantageously provides for
identification of an agonist or antagonist for a particular growth factor or cytokine, using routine screening techniques and a highly sensitive assay cell line that expresses a chimeric receptor comprising an extracellular domain specific for the ligand for which an analog (agonsit or antagonist) is of interest, and a cytoplasmic domain that provides for strong signal transduction in the cell.
In a specific embodiment, infra, CHO cells are modified to be responsive to IL- 10.
Thus, expression of a functional chimeric receptor in cells engineered to indicate the activity of the ligand for the extracellular domain of the receptor expressed after transfection or transduction of the cells is possible. Accordingly, the present invention contemplates a method for identifying specific ligands, and more particularly ligands that either agonize or antagonize receptor activity, using various screening assays known in the art
Any screening technique known in the art can be used to screen for agonists or antagonists. The present invention contemplates screens for small molecule ligands or ligand analogs and mimics, as well as screens for natural ligands that bind to and agonize or antagonize the chimeric receptor in vivo. For example, natural products libraries can be screened using assays of the invention for molecules that agonize or antagonize the natural ligand activity. In addition, screening for anti-idiotypic antibodies, e g. , based on competitive binding with the natural ligand for the chimeric receptor can be used to identify anti-idiotypic agonists and antagonists.
Another approach to screening for biologically active compounds uses recombinant bacteπophage to produce large libraries. Using the "phage method" [Scott and Smith, 1 990, Science 249:386-390 (1 990); Cwirla, et al , Proc. Natl.
Acad. Sci. , 87:6378-6382 (1 990); Devlin et al , Science, 249:404-406 (1 990)], very large libraries can be constructed ( 106-108 chemical entities). A second approach uses primarily chemical methods, of which the Geysen method [Geysen et al , Molecular Immunology 23:709-71 5 ( 1 986); Geysen et al. J. Immunologic Method 102:259-274 ( 1 987)] and the method of Fodor et al
[Science 251 :767-773 ( 1 991 )] are examples. Furka et al [ 14th International
Congress of Biochemistry, Volume 5, Abstract FR:01 3 ( 1 988); Furka, Int. J. Peptide Protein Res. 37:487-493 ( 1 991 )], Houghton [U.S. Patent No. 4,631 ,21 1 , issued December 1 986) and Rutter et al [U.S. Patent No. 5,010, 1 75, issued April 23, 1 991 ] describe methods to produce a mixture of peptides that can be tested as agonists or antagonists.
In another aspect, synthetic libraries [Needels et al , Proc. Natl. Acad. Sci. USA 90: 10700-4 (1 993), Ohlmeyer et al , Proc Natl Acad Sci. USA 90: 10922- 10926 (1 993); Lam et al , International Patent Publication No. WO 92/00262; Kocis et al , International Patent Publication No. WO 9428028, each of which is incorporated herein by reference in its entirety], and the like can be used to screen for IL- 10 receptor ligands according to the present invention.
Various assays may be performed to determine whether the candidate molecule, e.g., prepared in a combinatorial library as described above, or found in a library of natural products, acts as an agonist or antagonist of the natural ligand for the extracellular domain of a chimeric receptor. In a preferred embodiment, these tests employ recombinant cells engineered to express a functional chimeric receptor complex In a specific embodiment, an assay of the invention employs COS- 1 or CHO ceils transfected with vectors that provide for expression of a functional chimeric receptor.
Detection of chimeric receptor-mediated activation (or inhibition of activation) can be accomplished by evaluating changes in cell targets, as described above Chimeric receptor-mediated activation can be detected and quantified (or semi- quantified) by detecting increased phosphorylation of a Jak protein, such as Tyk2 in the case of the CRFB4 cytoplasmic domain, activation of a Stat protein, such as Statl or Stat3 in the case of the CRFB4 cytoplasmic domain, decreased production of a responsive molecule, e g. , interferon-)/, etc.
As shown in a specific embodiment, infra, phosphorylation of Tyk2 can be measured by double immunoprecipitation assays with an antι-Tyk2 antibody and an anti-phosphoprotem antibody, and detection of an identical band in both precipitations. Alternatively, Tyk2 phosphorylation can be evaluated by co-
transfection of cells transfected with a chimeric receptor that comprises the CRFB4 cytoplasmic domain with a vector for expression of Tyk2, and detection of phosphorylation by gel shift, antibody probes, or radiolabellmg with 32P. These specific examples are clearly generalizable to all of the signal transduction domains from cytokine or growth factor receptors.
Activation of Stat proteins can be evaluated by any of the techniques described in International Patent Publication No. WO 95/08629, by Darnell et al , published March 30, 1 995, and International Patent Publication No. WO 93/1 91 79, by Darnell et al , published September 30, 1 993. In specific embodiments, Stat protein activation can be evaluated by detecting Statl dimerization, or in gel- shift electrophoretic mobility shift assays (EMSA) using binding sites. For example, a 22 base pan sequence containing a Statl α binding site corresponding to the GAS element in the promoter region of the human IRF-1 gene can be used to evaluate Statl α activation [see Kotenko et al , J Biol Chem. 270.2091 5-21 ( 1995)].
Interferon-)/ expression can be detected using biological assays, e.g. , antiviral assays, or immunometπcally, such as by ELISA, ELISPOT, immunopreciptiation, etc.
Therapeutics The present invention provides a unique opportunity to enhance immune responses, to control inflammatory or autoimmune responses, and to treat diseases or disorders that result from a deficiency of an intracellular signaling pathway by circumventing that pathway.
Targeting effector cells As described in detail below, either antibody molecules or a cytokine or growth factor can be used to target effector cells to target cells
Such target cells may be tumor cells, virally infected cells, bacteπally infected cells, autoimmune cells, or inflammatory cells. Various strategies can be used to target and effector cell to the target cell. The effector cells can be used to control cell growth, e g., by mediating cell killing, where disregulation of growth or activity is involved in a disease or disorder. "Disregulation" refers to a
condition of unregulated growth or activity, such as is found in autoimmune response, pathological inflammatory response, and tumors
The present invention is directed the treatment of tumors, particularly solid tumors. Examples of solid tumors that can be treated according to the invention include sarcomas and carcinomas such as, but not limited to: fibrosarcoma, myxosarcoma, liposarcoma, chondrosarcoma, osteogenic sarcoma, chordoma, angiosarcoma, endotheliosarcoma, lymphangiosarcoma, lymphangioendotheliosarcoma, synovioma, mesothelioma, Ewing's tumor, leiomyosarcoma, rhabdomyosarcoma, colon carcinoma, pancreatic cancer, breast cancer, ovarian cancer, prostate cancer, squamous cell carcinoma, basal cell carcinoma, adenocarcmoma, sweat gland carcinoma, sebaceous gland carcinoma, papillary carcinoma, papillary adenocarcinomas, cystadenocarcmoma, medullary carcinoma, bronchogenic carcinoma, renal cell carcinoma, hepatoma, bile duct carcinoma, choπocarcinoma, seminoma, embryonal carcinoma, Wilms' tumor, cervical cancer, testicular tumor, lung carcinoma, small cell lung carcinoma, bladder carcinoma, epithelial carcinoma, glioma, astrocytoma, medulloblastoma, craniopharyngioma, ependymoma, pinealoma, hemangioblastoma, acoustic neuroma, oligodendroglioma, meningioma, melanoma, neuroblastoma, and retmoblastoma.
In another embodiment, dysprohferative changes (such as metaplasias and dysplasias) are treated or prevented in epithelial tissues such as those in the cervix, esophagus, and lung. Thus, the present invention provides for treatment of conditions known or suspected of preceding progression to neoplasia or cancer, in particular, where non-neoplastic cell growth consisting of hyperplasia, metaplasia, or most particularly, dysplasia has occurred (for review of such abnormal growth conditions, see Robbins and Angell, 1 976, Basic Pathology, 2d Ed., W.B. Saunders Co., Philadelphia, pp. 68-79) Hyperplasia is a form of controlled cell proliferation involving an increase in cell number in a tissue or organ, without significant alteration in structure or function. As but one example, endometπal hyperplasia often precedes endometπal cancer.
Metaplasia is a form of controlled cell growth in which one type of adult or fully differentiated cell substitutes for another type of adult cell Metaplasia can
occur in epithelial or connective tissue cells. Atypical metaplasia involves a somewhat disorderly metaplastic epithelium. Dysplasia is frequently a forerunner of cancer, and is found mainly in the epithelia; it is the most disorderly form of non-neoplastic cell growth, involving a loss in individual cell uniformity and in the architectural orientation of cells. Dysplastic cells often have abnormally large, deeply stained nuclei, and exhibit pleomorphism. Dysplasia characteristically occurs where there exists chronic irritation or inflammation, and is often found in the cervix, respiratory passages, oral cavity, and gall bladder. For a review of such disorders, see Fishman et al , 1 986, Medicine, 2d Ed , J. B Lippmcott Co., Philadelphia.
The present invention is also directed to treatment of non-malignant tumors and other disorders involving inappropriate cell or tissue growth by administering a therapeutically effective amount of an effector cell of the invention. The invention may be used to treat psoriasis, a dermatologic condition that is characterized by inflammation and vascular proliferation; benign prostatic hypertrophy, a condition associated with inflammation and possibly vascular proliferation; and cutaneous fungal infections. Treatment of other hyperpro ferative disorders is also contemplated
Autoimmune diseases include immune complex-induced vascu tis [Cochrane, 1 984, Springer Seminar Immunopathol 7.263 ( 1 984)], glomerulonephπtis
[Couser et al , Kidney Inst. 29:879 ( 1 986)], hemolytic anemia [Schreiber and Frank, J. Clin Invest 51 :676 ( 1 972)], myasthenia gravis [Lennon, et al , J. Exp Med. 147:973 ( 1 978), Biesecker and Gomez, J Immunol. 142:2654 ( 1 989)], type II collagen-induced arthritis [Watson and Townes, J Exp. Med. 1 62: 1 878 (1 985)]; experimental allergic and hyperacute xenograft rejection [Knechtle, et al , J. Heart Transplant 4(5):δ41 ( 1 985), Guttman, Transplantation 1 7:383 (1 974); Adachi, et al , Trans. Proc. 1 9( 1 ) .1 145 ( 1 987)]; rheumatoid arthritis, and systemic lupus erythematosus (SLE).
An antibody generated to an antigen on a target cell can be used to provide a membrane Ig/membrane SCA extracellular domain of an effector cell. Similarly, an cytokine or growth factor corresponding to a receptor found in reasonably
high density on the target cell can be used to target the effector cell.
The cytoplasmic domain of the effector cell is selected for high level activation of the cell upon ligand binding, and will be readily correlated depending on the effector cell chosen For example, if the effector cell is a cytotoxic T cell, the cytoplasmic domain may be obtained from the IL 2 receptor If the effector cell is an inflammatory cell (phagocyte), the cytoplasmic domain may be obtained from the TNF-σ receptor or IFN-σ receptor. When the cells chosen for infection are CD8 cytotoxic T-cells or NK cells, the use of the Hu-IFN-] R 1 and Hu-IFN-)/R2 chains can be used to stimulate the cell as would be provided by Hu-IFN-) when the synthetic receptor is activated.
Suitable antigens for targeting the chimeric mlg/R receptor include tumor associated antigen (TAA), viral antigen, growth factor receptors expressed at high levels on tumor cells, bacterial antigens (e.g , leishmania, mycobacteπum, etc.), or receptor molecules characteristic of a tumor, such as IL-2 on certain lymphomas. Any of the foregoing receptors can be used as targets for chimeric receptors that employ a cytokine or growth factor extracellular domain.
Various specificities of effector cells and target cells are listed below
Extracytoplasmic domain on Target on target cell (cell effector cell specificity or disease) TNF TNF-receptor (inflammatory cell, sepsis)
IL-2 IL-2R (lymphoma; autoantigen- specific T lymphocyte)
IL-1 IL- 1 R (inflammatory cell; sepsis)
IL-4 IL-4R (B cell lymphoma)
NGF NGF-R (neuroblastoma)
TGF TGF-R (tumor cell)
The foregoing effector/target combinations are provided purely as examples;
many more effector/target combinations are known in the art, and can be readily adapted with the chimeric receptors of the present invention to provide for therapy of the foregoing disease conditions.
Preferably, autologous effector cells are obtained from the subject in need of treatment for introduction of an expression vector for a chimeric receptor of the invention. In another embodiment of the procedure, instead of using freshly prepared cells form a human donor, it is possible to use cytotoxic cell lines that could be transfected or infected with various expression vectors expressing the receptor chains. These could be cytotoxic T-cells, NK cells, macrophages, or other cytotoxic cells. The cells with the synthetic receptor could be maintained in culture and used to target cancers in patients. The cells, in this case, would be heterologous cells that would eventually be eliminated by the host. This would be an internal intrinsic safety procedure. With the use of multiple cell lines developed to express antibodies or other molecules that could target the specific cancer cells, a panorama of cells would be available in cultures to use for many different cancers. Although antibodies would be a major targeting construct, other molecules that could target the surface of cancer cells could be used. For example, the expression of a transmembrane protein expressing IL-2 extracellularly, but attached to the transmembrane and intracellular domain of the activating molecules (i.e. , IL-2/|/R1 and IL-2/J R2 chimeric constructs) could be used to eliminate T-cell leukemia cells. The T-cell receptor itself could be used as an ectodomam coupled to different intracellular domains. The present invention provides a recognition chain on the surface of the cytotoxic cell attached to the activating intracellular domains. On activation of the complex by attachment to the target cell, the cytotoxic cell would be activated to kill the target cells. The use of autologous cells could be coupled by leucapheresis, isolation of particular cytotoxic cells, retroviral gene transfer, and return to the patient. Alternatively, a battery of cytotoxic heterologous cells with the various synthetic receptors or ligands on the cell surface could be available for use as necessary.
Enhancement of Targeting of Synthetic Receptors of Tumor Cells. Interferons have been shown to enhance the expression of tumor associated antigens
62 effectively in cancers (REFS). By treating patients with an interferon (IFN-σ, IFN- β, IFN- , IFN-ω and/or IFN-r) prior to introduction of the cytotoxic cell carrying the synthetic receptors, the cytotoxic cells will have a greater number of target cells that are positive for the expression of the tumor associated antigen. This preliminary treatment addresses one of the major problems in cancer therapy, namely, the heterogeneity of tumor cells. By first treating the patients with an interferon, virtually all the tumor cells will be expressing the TAA rather than a small percentage of the population.
Reconstitution of cytokine or growth factor sensitivity. In some conditions, the intrinsic or normal endogenous pathway for cellular activation is blocked. The examples, infra, surprisingly show that cellular activation can be achieved by alternative routes. Thus, if a disease or disorder is associated with a deficiency of a particular Jak or Stat protein, the present invention provides for circumventing that deficiency by providing a chimeric receptor with the extracellular domain from the native receptor that is non-functional due to the deficiency and a cytoplasmic domain that activates a different Jak or Stat protein. In a specific example, a chimeric receptor may also be used in gene therapy where patients lack one of the Jak kinases. Specifically, patients lacking Jak3 have a SCID phenotype that would be corrected with chimeric receptors consisting of the IL-2 receptor γc chain extracellular domain and an intracellular domain that would recruit Tyk2, Jak 1 , or Jak2, e.g. , CRFB4.
Transfection and Infection of Cells. Plasmids can be transfected into animal cells by a large number of procedures, as described above in the section relating to gene therapy. In the case of retroviral vectors, high titer stocks of viruses are prepared for infection of cells. In a preferred embodiment of high efficiency transfer of the vector to cells, the procedures of Dougherty and Ron [International Patent Publication No. WO 96/07368, published March 1 6, 1 995, by Dougherty et al. ; and Kuo et al , Blood 82:845 ( 1 993)] are employed. As described above, all this is accomplished without the treatment of the patient with the cytokine itself, thus avoiding side effects mediated by the cytokine, but by the introduction of the synthetic receptor ectodomam coupled to the intracellular domain that controls the signal transduction pathway to be
activated into the cells. As noted above, a wide variety of combinations are possible and even multiple signals can be generated by preparing a set of retroviral vectors with different intracellular domains Since at high multiplicity, several retroviral vectors can infect and integrate into each cell, multiple pathways that activate the cytotoxic signals can be initiated on binding of the synthetic receptor to the target cell.
It is possible to remove cells expressing the antibody receptor in cases where more cells than desirable are present. The cells can be removed by ex vivo or in v/vo procedures. For ex vivo procedures, the peripheral blood leukocytes are removed by leucapheresis and passed through membranes, netting, filters, tubes, columns, or other matrices containing bound antigen. The cells binding antigen are removed and the remaining cells returned to the host. To remove cells in vivo, a soluble dimer or higher o gomer of the antigen is administered intravenously to binding to the cells. Upon binding the cells are activated and will self-destruct. Another safety backup is the simple blocking of the receptor without activation This can be done by the intravenous administration of soluble antigen monomer Binding of the monomer to the synthetic receptor on the cell surface will block interaction of the receptor with cells expressing the antigen and thus prevent dimerization of the receptor and consequent activation of the cells. The soluble monomer binding to the synthetic cell surface receptor can therefore be used to modulate the response if desirable.
EXAMPLES
The present invention may be better understood by reference to the following non-limiting Examples, which are provided as exemplary of the invention.
EXAMPLE 1 : Signalling By IFN- With Chimeric IFN-- R2 Chains
Containing Intracellular Domains From Various Receptors
To assess whether the specificity of signal transduction resides in the Jaks, a variety of chimeric receptors based on the human IFN-) receptor complex were prepared The extracellular domain of the second human IFN-* receptor chain,
64 designated Hu-IFN- R2 or AF-1 [Soh et al , J. Biol . Chem. , 269: 18102-1 81 10 ( 1 994)], was fused to the transmembrane and intracellular domains of various receptors. Notably, this receptor was fused to a signal transduction chain of previously unknown function. The present Example provides evidence that this cytokine signal transduction chain of unknown function is the signal transduction chain for the IL-10 receptor
Materials and Methods Reagents, Restriction Endonucleases and Other Enzymes Taq polymerase and all restriction endonucleases were from Boehπnger Mannheim Biochemicals or New England Biolabs; Sequenase 2.0 and T4 DNA ligase were from United
States Biochemical Corporation. The [σ-J2P]dATP and [j/-32P]ATP were from New England Nuclear The crosshnker bιs(sulfosuccιnιmιdyl)suberate (BS3) was from Pierce Chemical Co. All other chemical reagents were analytical grade and purchased from United States Biochemical Corp
Plasmid Construction The vector pγR2 expressing the Hu-IFN-j R2 chain under control of CMV promoter was constructed as described previously [Soh et al , Cell, 76:793-802 (1 994); Kotenko et al. , J. Biol Chem. , 270*2091 5-20921 (1 995)]. The vector p R1 expressing the Hu-IFN-)/R1 chain was constructed as follows. The pHu-IFN-j/R8 plasmid [Kumar et al , J. Bio Chem , 264: 1 7939- 1 7946 (1 989)] was digested with Hindlll restriction endonuclease, incubated with the large fragment of DNA polymerase I and dNTPs to fill in the ends and then digested with βamHI restriction endonuclease. The fragment containing the Hu-IFN-)/R1 cDNA was ligated into EcoRV and βamHI sites of the pcDNA3 vector (Invitrogen).
The Hu-IFN-σR1 cDNA was recloned from HulFNARI /pcDNAI [Lim, Ph D Thesis,
Rutgers University, Piscataway, NJ, ( 1 995)] into pcDNA3 with fcoRI and Xba\ restriction endonucleases. The expression vector was designated pσR1 . The PCR products for Hu-IFN-σR2 cDNA were obtained by a nested PCR procedure with a λpCEVI δ phage DNA mixture isolated from about δ x 106 phage clones from the human M426 cell library [Miki et al , Gene, 83.1 37-146 ( 1 989)] as template. The primers for the first round of PCR were:
δδ δ'-GCCGCAAGGCGAGAGCTGC-3' (SEQ ID N0:5) specific for the 6' end of Hu- IFN-σR2 cDNA [Novick et al , Cell, 77:391 -400 ( 1 996)]; and ΛpCEVI δ vector primer δ '-AGATCTAAGCTTGGCCGAGG-3' (SEQ ID NO:6). For the second round the same 5 ' primer and primer 5 '- GCGGAATTCTTAATCACTGGGGCACAG -3 ' (SEQ ID NO:7) specific for the
3 ' end (bases 1 204 - 1 222) of Hu-IFN-σR2 cDNA (boldface) containing an fcoRI site within the primer were used. The PCR product was digested with FcoRI restriction endonuclease and iigated into ZFcoRI and blunt ended βamHI sites of the pcDNA3 vector. The expression vector was designated pσR2.
To isolate the Hu-CRFB4 cDNA an ohgonucleotide δ '-GTCCATGGCGTGGAGCCTTGGGAG-3' (SEQ ID NO:8) homologous to the 5 ' end of Hu-CRFB4 cDNA [Lutfalla et al. , Genomics, 16:366-373 (1 993)] was labeled with [σ-32P]dATP with terminal deoxynucleotide transferase to a specific activity of δ x 10fa cpm/μg. It was used to screen about 1 06 phages from the human M426 cell library [Miki et al , supra]. Two positive clones were purified and plasmids were rescued from these two λ phages. The CRFB4 cDNA was released from one of the rescued plasmids designated pCEV1 5-CRFB4-1 by digestion with Thai and Sail restriction endonucleases and cloned into EcoRV and Xhol sites of the pcDNAIneo vector (Invitrogen). The expression vector for the Hu-CRFB4 chain was designated pCRF.
The vector expressing the chimeric receptor Hu-IFN-)/R2/Hu-IFN-) R1 (γR2/yR'\ ) was constructed as followed. The asymmetric PCR reaction was performed with a specific primer δ'-GATGCCTCCACTGAGCTTCAGCAACTTTGGATTCCAGTTGTTGC-3' (SEQ ID NO:9) and 100-fold excess of T7 primer with plasmids pHu-IFN-)/R8 (the Hu-IFN-
|/R1 cDNA) and p R as templates m the same reaction mixture. The second round of the PCR was performed with the set of primers
5 '-GACCCTCTTTCCCAGCTGC-3' (SEQ ID NO: 1 0) and δ '-GCCACACATCCTCTTTACGC-3' (SEQ ID NO: 1 1 ) with 1 μl of PCR reaction mixture from the first round of PCR as template. The final j/R2/) R1 PCR product was digested with βstEII restriction endonuclease and cloned into βstEII and
66 blunt-ended Xbal sites of the pγR2 plasmid. The expression vector was designated p| R2/j R1 .
To introduce an Nhel site in the beginning of the transmembrane domain of the Hu-IFN- R2 cDNA clone, the PCR reaction was performed with two primers 5'-GCCTTTTTTAGTTATTATGTC-3' (SEQ ID NO.1 2) and
5'-ATCGCTAGCCATTGCTGAAGCTCAGTGGAGG-3' (SEQ ID NO: 1 3) and plasmid pγR2 as a template according to a standard protocol [Sambrook et al., Molecular Cloning: A Laboratory Manual ( 1 989)] The PCR product was digested with βstXI restriction endonuclease and ligated into βstXI and EcoRV sites of the pγR2. The plasmid was designated pγR2Nhel.
To construct chimeras Hu-IFN-yR2/Hu-IFN-σR 1 , Hu-IFN- 'R2/Hu-IFN-αR2, and Hu-IFN-| R2/CRFB4, the PCR reactions were performed with SP6 primer and 5'-GTGGCTAGCTATAGTTGGAATTTGTATTGC-3 ' (SEQ ID NO: 14) or 5 '-GTGGCTAGCATAATTACTGTGTTTTTGAT-3' (SEQ ID NO: 1 5) or 5'-GTGGCTAGCCGTCATCCTCATGGCCTCG-3' (SEQ ID NO: 1 6) primers with plasmids pσR1 , pσR2 or pCRF, respectively, as templates. The Hu-IFN-σR1 and Hu-IFN-σR2 PCR products were digested with Nhel and Apal restriction endonucleases and ligated into Nhel and Apal sites of the pγR2Nhel. The CRFB4 PCR product was digested with Nhel and Xbal restriction endonucleases and ligated into Nhel and Xbal sites of the plasmid pγR2Nhel. The plasmids were designated p)/R2/σR1 , pγR2lαR2 and pj/R2/CRF, respectively.
To create chimera Hu-IFN-) R2/IL-2R(/r, the γ chain of IL-2R [Takeshita et al. , Science, 257:379-382 (1992)] was obtained by RT-PCR as follows. The first strand cDNA synthesis in RT-PCR was performed with poly(dT)18 primer with M- MulV reverse transcπptase with total RNA isolated from peripheral blood leukocytes as template. Two PCR rounds were performed. The primers δ '-CGGTTCAGGAACAATCGG-3' (SEQ ID NO: 1 7) and δ '-CAAGCGCCATGTTGAAGCC-3' (SEQ ID NO: 1 8) were used for the first round. For the second round the PCR product from the first round was diluted 100-fold and used as a template for the second round with primers δ '-GTTAGTACCACTTAGGGC-3 ' (SEQ ID NO: 1 9) and
67
5'-GTGGCTAGCATGGGAAGCCGTGGTTATC-3' (SEQ ID NO:20). The IL-2R)/C PCR product was digested with Nhel restriction endonuclease and ligated into the Nhel and blunt ended Xbal sites of plasmid pγR2Nhel. The resultant expression vector was designated pγR2/γc. The nucleotide sequences of the modified regions of all the constructs were verified in their entirety.
Cells, Media and Transfection. The 1 6-9 hamster x human somatic cell hybrid line is the Chinese hamster ovary cell (CHO-K1 ) hybrid containing a translocation of the long arm of human Chromosome 6 encoding the HUIFNGR1 (Hu-IFN-| R 1 ) gene and a transfected human HLA-B7 gene [Soh et al., Proc. Natl. Acad. Sci USA, 90:8737-8741 ( 1 993)]. The 1 6-9 cells were maintained in F1 2 (Ham) medium (Sigma) containing 6 % heat-inactivated fetal bovine serum (Sigma) (complete F1 2 medium). HEp-2 cells, a human epidermoid larynx carcinoma cell line, and COS-1 cells, a SV40 transformed fibroblast-like simian cell line, were maintained in DMEM medium (GIBCO) with 10% heat-inactivated fetal bovine serum.
The 1 6-9 cells were stably transfected with the expression vectors ( 1 -3 μg of super-coiled plasmid DNA per 105-106 cells) with LipofectAMINE™ Reagent (Life Technologies) according to the manufacturer's instructions for stable transfection of adherent cells. For cotransfection we used 1 -3 /vg of plasmid DNA with the neoR gene and a 10-fold excess of plasmid DNA without neoR gene per 105-1 06 cells. All cell lines transfected with plasmids carrying the neoR gene were selected and maintained in complete F1 2 medium containing 450 μg/ml of antibiotic G41 8. COS-1 cells were transiently transfected with the expression vectors by the DEAE-dextran procedure with DMSO shock [Seed et a/ , Proc. Natl. Acad. Sci. USA, 84:3365-3369 ( 1 987); Sussman et al. , Mol.
Cell. Biol , 4: 1 641 - 1 643 (1 984))
Cytofluorographic Analysis. Cytofluorographic analysis of cells for expression of the HLA-B7 surface antigen was performed as described previously [Jung et al , Somatic Cell and Molecular Genetics, 14:583-692 ( 1 988); Cook et al , Proc. Natl. Acad. Sci. USA , 89: 1 1 31 7-1 1 321 ( 1 992); Hibmo et al., J. Bio Chem. ,
267:3741 -3749 ( 1 992)]. Hu-IFN-σA/D, a chimeric human interferon active on
hamster cells [Rehberg et al., J. Biol. Chem. , 257: 1 1497-1 1 502 ( 1 982)], was used as a control to demonstrate the integrity of the HLA-B7 gene in various cell lines.
Cross-linking of IFN-γ to Receptors. Recombinant Hu-IFN-)/ with a specific activity of 2 x 107 units/mg was phosphorylated as reported [Rashidbaigi et al ,
Proc. Natl. Acad. Sci. USA, 83:384-388 (1 986); Mariano et al , in Cytokines: A Practical Approach, 95- 108, ( 1 991 )]. The [32P]Hu-IFN-|/ was bound to cells and then crosshnked as described previously [Kotenko et al., supra].
Antibodies. Rabbit antι-Jak1 , anti-Jak2 and antι-Jak3 antibodies were developed against synthetic peptides KTLIEKERFYESRCRPVTPSC (SEQ ID
NO:21 ), DSQRKLQFYEDKHQLPAPKC SEQ ID NO:22) and
AKLLPLDKDYYVVREPG (SEQ ID NO:23) corresponding to the end of the kinase- like domains of murine Jak1 and Jak2, and a to sequence within the kinase domain of murine Jak3, respectively. Rabbit antι-Tyk2 antibody was from Santa Cruz Biotechnology (catalog #SC-1 69). Rabbit anti-Statl σ antibody was raised against the C-termmus of Statl α. Monoclonal anti-phosphotyrosine antibody was from Sigma (catalog #P3300) . Rabbit antι-Hu-IFN-)/R2 antibody was prepared with the extracellular domain of Hu-IFN-|/R2 as antigen.
Immunoprecipitations, Blottings and Kinase Assay. Cells were starved overnight in serum free media and subsequently stimulated with Hu-IFN-) ( 1000 units/ml) for 10 minutes at 37 °C. Preparation of cell lysates, immunoprecipitations, blottings and in vitro kinase activation assay were performed as described [Kotenko et al , supra].
Electrophoretic Mobility Shift Assays (EMSA). EMSAs were performed with a 22 base pair sequence containing a Statl α binding site corresponding to the
GAS element in the promoter region of the human IRF-1 gene (5'-GATCGATTTCCCCGAAATCATG-3 ') (SEQ ID NO:24) as described [Kotenko et al., supra].
Results
Construction of Chimeric Receptors, Expression in COS Cells and Crosslinking. To investigate the specific requirements for the intracellular domain of Hu-IFN- ) R2 we created chimeric receptors with the extracellular domain of Hu-IFN-j R2 attached to the transmembrane and intracellular domains of different human receptors as shown in Figure 1 . The following receptors were used: two chains of the Hu-IFN-)/ receptor complex, Hu-IFN-)/R1 (γR 1 ) [Aquet et al., Cell 55:273- 280 ( 1 988)] or human IFN-)/R1 t456 ( R 1 t456) the truncated R1 with the intracellular domain terminated by premature stop codon after ammo acid 456 [Cook et al., supra], and Hu-IFN-(/R2 ( R2) [Soh et al , Cell, 76:793-802 ( 1 994)]; two chains of human IFN-σ receptor complex, Hu-IFN-σR1 (σR1 ) [Uze et al., Cell,
60:225-234 ( 1 990)] and Hu-IFN-σR2 (σR2) [Novick et al., supra]; Hu-CRFB4, a class II cytokine receptor with unknown function [Lutfalla et al , supra]; and Hu- IL-2 receptor γc chain [Takeshita et al , supra]. To confirm that all chimeric receptors can be expressed properly, the ability of expression vectors encoding chimeric receptors to express the proteins was determined. All plasmids were transiently transfected into COS-1 cells and the expression of the receptors were evaluated. The cellular lysates from COS-1 cells transiently transfected with the expression vectors were resolved on SDS-PAGE, transferred to membrane and probed with antibodies to the Hu-IFN-|/R2 extracellular domain as all these chimeric receptors contain the Hu-IFN- R2 extracellular domain. In all cases specific bands were detected (Figure 2) . Thus, all vectors encoding the chimeric receptors express these proteins.
It was previously shown that the Hu-IFN-)/R2 chain is a part of the human IFN-)/ receptor ligand binding complex, although by itself does not bind Hu-IFN-) ; nevertheless, the Hu-IFN-) R2 chain can be detected by crosslinking to Hu-IFN-)/
[Kotenko et al, supra]. Therefore, crosslinking was used to ascertain that the chimeric receptors were expressed on the cell surface and were able to participate in the human IFN-)/ receptor ligand binding complex (Figure 3). All chimeric receptors were stably expressed in 1 6-9 cells, hamster cells expressing the Hu-IFN- R1 chain [Soh et al , Proc. Natl. Acad. Sci. USA, 90:8737-8741
( 1 993)], and antibiotic G41 8-resistant cell populations were used in crosslinking experiment. The cell lines were designated according to the extracellular/mtracellular domains (e.g. , γR2lγR1 ) of the chimeric receptors
expressed (Figure 1 ). The crosslinking of labeled IFN- to the parental 1 6-9 cells results in formation of a single crosslmked band on the SDS-PAGE migrating in the region of 1 20 kD and corresponding to the Hu-IFN-| :Hu-IFN-|/R 1 (I FN- R D complex [Kotenko et al., supra]. It was shown that the additional band observed in the γR2 cells migrating in the region of 60 kD corresponded to the
Hu-IFN-)/:Hu-IFN-ι R2 (lFN-γ:γR2) complex [Kotenko et al , supra]. In addition to the IFN-| : R1 crosslmked complex observed in all cell lines (Figure 3), the mobility of the second band corresponded to the lFN-γ:yR2/X complex (where X represents the transmembrane and intracellular domains of the chimeric receptor expressed) and was different for each chimeric receptor (Figure 3). The IFN-
J : J/R2/X complex was observed for all chimeric receptors, indicating that they all were expressed on the cell surface and formed ternary gand-receptor complexes (j R1 :IFN-|/: | R2/X) in all cell lines. Because the Hu-IFN-) : R2/|/R1 complex has almost the same mobility as the HU-I FN-J R I complex formed from the endogenous Hu-IFN-| R 1 , in yR2/yR1 cells a single crosslmked band in the region of 1 20 kD (Figure 3, right panels) was observed. In addition, in the 1 6-9 cells transfected with the γR2/γR MΛ5β (yR2/γR 'l chimera, containing a truncated yR I intracellular domain, j/ l ^se)' tne appearance of a faster migrating band representing a cross-linked complex migrating faster than the Hu-IFN- γ:γR2lγR'\ complex (Figure 3, right panels) was observed.
Class I MHC Antigen induction. Class I MHC antigen (HLA-B7 surface antigen) induction was measured to evaluate the ability of the chimeric receptors to support signal transduction upon Hu-IFN-j/ treatment in the 1 6-9 cells transfected with different chimeric receptors. The 1 6-9 cells, expressing only the Hu-IFN-j/RI chain of the Hu-IFN-)/ receptor complex, exhibited little or no response to Hu-IFN- (Figure 4A). The 16-9 cells were transfected with an expression vector encoding the intact Hu-IFN-j/R2 ( R2) or the chimeric receptors Hu-IFN- R2/Hu-IFN-) R 1 (γR2lγR1 ), Hu-IFN-)/R2/Hu-IFN-|/R1 t456 (γR2lγRλ \), Hu-IFN- R2/Hu-IFN-σR1 (( R2/σR1 ), Hu-IFN-|/R2/CRFB4 ( R2/CRF), Hu-IFN-ι R2/IL-2R)/c (γR2lγc) to obtain stable transformants. In addition, 1 6-9 cells were cotransfected with an expression vector encoding Hu-IFN- R2/IL-2Rι/c and an expression vector encoding murine Jak3 (γR2lγc + Jak3). These stable transformants exhibited a significant response to Hu-IFN-) (Figures 4B, C, D, E,
G, H, I). For all responsive cell lines the histograms represent the data for clonal cell populations. The Hu-IFN-) did not induce MHC class I antigens in 1 6-9 cells stably transfected with the expression vector encoding the Hu-IFN-)/R2/Hu-IFN- σR2 (yR2/aR2) chimera (Figure 4F). As a control, it was shown that all cells responded to Hu-IFN-σA/D demonstrating that the MHC class I antigen could be induced in all cell lines (data not shown).
The Recruitment of Different Jaks into the IFN-γ Receptor Complex. It was reported that different receptors are associated with different Jak family members. Particularly, Hu-IFN-σR1 associates with Tyk2 [Barbieπ et al , supra; Colamonici et al , Mol. Cell. Biol , 14:81 33-8142 ( 1 994)], Hu-IFN-yR2 associates with Jak2 [Kotenko et al , supra] and IL-2R|/C associates with Jak3 [Russell et al , supra; Miyazaki et al , supra; Tanaka et al , supra]. Jak 1 was shown to associate Hu-IFN-|/R1 [Igarashi et al , J. Biol Chem. , 269: 14333- 14336 ( 1 994); Sakatsume et al , J. Biol Chem , 270: 1 7528-1 7634 ( 1 995)] and reported to associate with Hu-IFN-σR2 [Novick et al , supra]. In addition,
Hu-IFN-|/R 1 probably weakly associates with Jak2 after oligomeπzation upon ligand binding [Kotenko et al , supra]. The ability of the intracellular domains of different receptors fused to the Hu-IFN-(/R2 extracellular domain to recruit different members of the Jak family into the Hu-IFN-)/ receptor complex and to determine if the recruited Jaks can be activated upon Hu-IFN-) treatment was tested. First, the phosphorylation of Jak2 upon Hu-IFN-)/ treatment in the cell lines expressing various chimeric receptors (Figure 5A) was determined. The phosphorylation of Jak2 in response to Hu-IFN-)/ in cells was examined by immunoprecipitation with specific antι-Jak2 antibodies, followed by a western blot visualized with anti-phosphotyrosine antibodies. The phosphorylation of
Jak2 only in γR2 cells (Figure 5A) was detected.
Inability to detect Jak2 activation in 1 6-9 cell lines responsive to Hu-IFN-)/ containing the chimeric receptors )/R2/σR1 and (/R2/CRF suggested involvement of other Jaks in these cells. Since the Hu-IFN-σR1 associates with Tyk2 [Barbieπ et al , supra; Colamonici et al , supra], Tyk2 activation in cells expressing the chimeric R2/σR1 chain was evaluated. With antι-Tyk2 antibodies which were developed against human Tyk2, weak phosphorylation of
a protein of — 1 30 kD was detected which was precipitated with anti-Tyk2 antibodies in the cells expressing γR2/aR 1 and /R2/CRF (Figure 6B) . When the same blot was reprobed with antι-Tyk2 antibodies, these phosphorylated proteins corresponded to a band recognizable by antι-Tyk2 antibodies and likely represented hamster Tyk2 (Figure 6B, lower panels), but these proteins migrated slightly slower than human Tyk2 from lysates of COS-1 cells transiently transfected with a plasmid encoding human Tyk2 (data not shown). We observed the phosphorylated proteins of the same size in R2/σR 1 and J/R2/CRF cells when immunoprecipitation was performed with anti-phosphotyrosine antibodies and the blot was probed with antι-Tyk2 antibodies (Figure 5C). The same differences in mobility of hamster Tyk2 from human Tyk2 from control lysates of COS-1 cells transiently transfected with a plasmid encoding human Tyk2 were observed (Figure 6C).
To confirm that the phosphorylated protein in yR2/aR 1 and ) R2/CRF cells was activated Tyk2, we stably cotransfected a plasmid encoding yR2/aR1 or
1 R2/CRF with a plasmid encoding human Tyk2 into the 1 6-9 cells. The new cell lines were designated R2/σR 1 + Tyk2 and )/R2/CRF + Tyk2, respectively. As controls we also cotransfected a plasmid encoding either j/R2, (/R2/- R1 or γR2/aR2 with a plasmid encoding human Tyk2 into the 1 6-9 cells The resultant cell lines were designated |/R2 + Tyk2, γR2lyR1 + Tyk2 and γR2laR2 + Tyk2, respectively. First, we performed immunoprecipitation with antι-Tyk2 antibodies from cellular lysates prepared from yR2laR 1 + Tyk2 and yR2/aR 1 cells to evaluate the expression of exogenous human Tyk2 and endogenous hamster Tyk2. After blotting with antι-Tyk2 antibodies it was observed that human Tyk2 was expressed at a much higher level or was able to be precipitated with the antibodies to a greater extent than hamster Tyk2. We also observed the same differences in mobility of human Tyk2 expressed in the 1 6-9 cells and hamster Tyk2 as we observed above with Tyk2 expressed in COS-1 cells (Figure δD). With these cell lines, we observed weak phosphorylation of Tyk2 in untreated γR2/a ^ + Tyk2 and R2/CRF + Tyk2 cells as well as in untreated and treated vR2 + Tyk2, γR2lγR λ + Tyk2 and γR2laR2 + Tyk2 cells. This is in agreement with the observation that overexpression of members of Jak family causes a low spontaneous level of phosphorylation of kinases in the absence of
ligand [Watlmg et al , supra; Mϋller et al , Nature, 366: 1 29-1 35 ( 1 993); Silvennoinen et al , supra]. However, only in γR2lαR 1 + Tyk2 and R2/CRF + Tyk2 cells did we observe an enhancement of Tyk2 phosphorylation after Hu-IFN-) treatment (Figure 5E). Thus, we showed that the intracellular domains of Hu-IFN-σR 1 and Hu-CRFB4 linked to the extracellular domain of γR2 causes activation of Tyk2 instead of Jak2 which is regularly observed during IFN-) signalling.
The chimeric receptor γR2/γc was able to render 1 6-9 cells responsive to human IFN-) to a small extent as measured by class I MHC antigen induction (Figure 4H). It was shown that the IL-2R c chain associates with Jak3 [Russell et al , supra; Miyazaki et al , supra; Tanaka et al , supra] Thus, we examined whether Jak3 participates in the IFN-j/ receptor complex in γR2/γc cells. We hypothesized that failure of Hu-IFN-)/ to induce strong MHC class I antigen induction is due to low level of endogenous Jak3 expression in the 1 6-9 hamster ovary cells since Jak3 is normally only expressed in hemopoietic cells. To test the hypothesis that the low level of Jak3 limited the I FN- signalling in γR2/γc cells, we stably cotransfected a plasmid encoding γR2/γc with a plasmid encoding either Jak1 , Jak2, Jak3, or Tyk2 into the 1 6-9 cells. Cell lines were designated γR2lγc + Ja λ , γR2lγc + όak2, γR2lγc + όa 3 and (/R2/ c + Tyk2, respectively. Upon Hu-IFN-)/ treatment, only γR2lγc + Jak3 cells showed strong enhancement in MHC class I antigen induction upon Hu-IFN-)/ treatment (Figure 41). All other cell lines showed the same level of responsiveness as γR2lγc cells (Fιgure4H). We confirmed the participation of Jak3 in IFN-)/ signalling in the )/R2/)/c -t- Jak3 cells by immunoprecipitation experiments. Only in γR2lγc + Δak3 cells did we observe enhancement in Jak3 phosphorylation after Hu-IFN- treatment. After longer exposure, a low spontaneous level of Jak3 phosphorylation was observed in untreated γR2lγc + Δa 3 cells and in treated and untreated )/R2 + Jak3 cells used as a control similar to Tyk2 phosphorylation observed in cells overexpressmg Tyk2 (see above). Thus, we showed that the γR2lγc chimeric receptor recruits Jak3 into the IFN-- receptor complex due to association of the IL-2R)/C intracellular domain with Jak3, and that IFN-)/ induces phosphorylation of Jak3 in |/R2/|/C + Jak3 cells instead of phosphorylation of
Jak2. Therefore, the substitution of the intracellular domain of γc for yR2 accordingly substitutes Jak3 for Jak2 in the functional IFN-) receptor complex.
Jak 1 was shown to be activated upon IFN-)/ treatment by the in vitro kinase activation assay only in cell lines positive in MHC class I antigen induction.
IFN-y Activates Stat lα through Jak Family Members other than Jak2. It was proposed that Jaks can contribute to the specificity of signal transduction by different IFNs, particularly, Tyk2 (which is active only during Type I IFN signalling) and Jak2 (which is active only during IFN-)/ signalling) [Ihle et al , supra]. To evaluate this hypothesis, we performed electrophoretic mobility shift assays with cell lysates prepared from the various transformants before and after treatment with Hu-IFN-)/ (Figure 6). Since Statl σ homodimer formation occurs during IFN-)/ signalling and Statl σ homodimers bind the GAS element with high specificity, we used ohgonucleotides corresponding to the GAS element in the promoter region of the human IRF-1 gene as the phosphorylated probe [Yuan et al , Mol. Cell. Biol , 14: 1 667-1 668 ( 1 994)]. The formation of
Statl α DNA binding complexes (Figure 6) was observed in all cell lines responsive to Hu-IFN-)/ as determined by induction of MHC class I antigen (Figure 4). The Hu-IFN-)/ induced activation of Statl σ in γR2/γc + Jak3 cells was increased to the level comparable to the level of Statl σ activation in all other Hu-IFN-)/ responsive cell lines (data not shown). Because it was shown that other Stats can bind the same GAS element with different affinity [Seidel et al , Proc. Natl. Acad. Set. USA, 92:3041 -3045 ( 1 995)], supershift assays were performed with specific antι-Stat1 σ antibodies to determine whether the GAS binding complexes observed in the tested cells are formed by Statl α homodimers. The GAS binding complexes in all tested cells were shifted, indicating that Statl σ was activated in all Hu-IFN-)/ responsive cells (Figure 6)
Discussion Type I mterferons (IFN-σ and IFN-0) activate Jak 1 , Tyk2, Statl and Stat2 during signal transduction; Type II interferon (IFN- ) uses Jak 1 , Jak2 and Statl for signalling [Velazquez et al , supra; Watlmg et al, supra; Mϋller et al , Nature,
366: 1 29-1 35 ( 1 993) and EMBO, 12:4221 -4228 ( 1 993), Leung et al. , supra]. It
was proposed that the utilization of different kinases by a particular receptor complex could contribute to the specificity of signalling by different IFNs [Ihle et al , supra]. To evaluate this hypothesis, a series of experiments with chimeric receptors was undertaken.
The IFN-) receptor complex whose components and signal partners are now well defined was employed as a model. It has been shown that the active receptor complex consists of two chains of IFN--/R 1 (γR1 ) and likely two chains of IFN- γR2 (γR2) oligomeπzed upon primary binding of the IFN-) homodimer to the IFN- R 1 [Greenlund et al , J. Biol Chem. , 268: 1 8103-1 81 10 (1 993); Langer et a/. , Proc. Natl. Acad. Sci. USA, 91 :6818-5822 ( 1 994); Marsiers et al , Proc. Natl.
Acad. Sci. USA, 92 5401 -5405 ( 1 995); Walter et al. , Nature, 376:230-235 ( 1 995) ; Kotenko et al , supra]. IFN--/R1 primarily associates with Jak1 [Igarashi et al , supra; Sakatsume et al , supra] and, perhaps, weakly with Jak2 after IFN- )/R 1 homodimerization [Kotenko et al , supra] The intracellular domain of IFN- |/R2 associates with Jak2 and brings Jak2 into the complex upon ligand binding
[Kotenko et al , supra; Sakatsume et al , supra] The expression of a kinase negative Jak 1 mutant in a Jak 1 negative (U4A) cell line can sustain an IFN-)/ response, indicating that Jak1 predominantly plays a structural role in the normal functional IFN-)/ receptor complex rather than catalytic role [Bπscoe et al , J. Interferon and Cytokine Res. , 15:S56 ( 1 995)] Thus PTK activity of Jak1 is dispensable for IFN-)/ signalling. In contrast, the expression of a kinase negative Jak2 mutant in a Jak 2 negative (γ2f ) cell line cannot sustain an IFN-)/ response [Bπscoe et al., supra), indicating that the PTK activity of Jak2 is absolutely necessary for IFN-)/ signalling. Thus, we tested whether substitution of Jak2 by other kinases would change the specificity of signal transduction by IFN-)/. For this purpose the intracellular domains of other receptor chains was substituted for the intracellular domain of Hu-IFN-*/R2 to recruit kinases other than Jak2 into the IFN-)/ receptor complex The extracellular domain of Hu-IFN-|/R2 was fused to the transmembrane and intracellular domains of either the Hu-IFN-) R1 (γR2lγR1 ), Hu-IFN-σR 1 (γR2lαR1 ), Hu-IFN-σR2 (γR2lαR2), Hu-CRFB4 ()/R2/CRF) or Hu-IL-2R)/C chain (γR2lγc) (Figure 1 ) The chimeric chains were expressed in 1 6-9 cells, Chinese hamster ovary cells expressing Hu-IFN-) R1 . By crosslinking [Kotenko et al , supra] it was shown that all chimeric receptors were expressed
on the cell surface and were able to participate in formation of the extracellular IFN- receptor complex (Figure 3). We then determined biological responsiveness of the cells to Hu-IFN-)/ as measured by MHC class I antigen induction (Figure 4). The chimeric receptors γR2/γR1 , R2/σR 1 , J/R2/CRF and γR2/γc rendered the 1 6-9 cells responsive to Hu IFN-)/ (Figure 4C, E, G, H). In contrast, the chimeric receptor γR2/aR2 did not support signal transduction by Hu-IFN-j (Figure 4F) Finally, we investigated the activation of Jaks and Stats to determine whether the specificity of signal transduction is altered in cells expressing these chimeric receptors.
In j/R2/σR1 cells detected phosphorylation of Tyk2, but not Jak2 (Figure 5A, B,
C and E) was detected. This is in agreement with observation that the IFN-σR 1 (σR1 ) intracellular domain associates with Tyk2 [Barbieπ et al , supra; Colamonici et al, supra]. Similarly, it was shown that Hu-IFN-) induces phosphorylation of Tyk2, but not Jak2 in (/R2/CRF cells (Figure 5A, B, C and E) Thus, the intracellular domain of CRFB4 or Hu-IFN-σR 1 fused to the extracellular domain of Hu-IFN- R2 recruits Tyk2 into the IFN-)/ receptor complex and allows Hu-IFN-)/ to signal through activation of Tyk2 instead of Jak2, as usually occurs during IFN-) signalling. Thus, the activation of Jak2 per se is not necessary for signal transduction by IFN-)/ and Tyk2 can substitute for Jak2.
The yR2/yR1 chimeric chain brings an additional molecule of Jak 1 into the IFN- receptor complex. Although phosphorylation of Jak2 in γR2/ R ^ cells was not detectable (Figure 5A), there may be some involvement of Jak2 in signal transduction by I FN- in γR2/yR '\ cells, arising through a weak interaction between dimeπzed IFN--/R1 and Jak2 [Kotenko et al , supra]. There are two regions of the IFN-J/R 1 intracellular domain important for signalling, the membrane proximal region, with a possible Jak 1 association site [Farrar et al , J Bio Chem. , 266: 1 9626-1 9635 ( 1 991 )], and the membrane-distal region around Tyr457 [Cook et al , supra; Farrar et al , Proc. Natl Acad Sci. USA, 89: 1 1 706- 1 1 71 0 ( 1 992)], the Statl α recruitment site [Greenlund et al , supra] The presence of the Statl α recruitment site on this chimeric receptor chain is not required for activity because R2 κ 1 456 cells that also express the normal Hu- IFN-J R1 chain are still responsive to Hu-IFN-( (Figure 4D)
To investigate further the ability of Jaks to substitute for each other )/R2/ c ce,ls were examined. The IL-2R|/C chain is a common chain for a broad range of receptor complexes for such cytokines as IL-2, IL-4, IL-7, IL-9 [for review see Kishimoto et al , Cell, 76:253-262 (1 994)] and IL-1 5 [Gin et al. , EMBO, 13:2822-2830 ( 1 994)]. The intracellular domain of the IL-2R|/C chain associates with Jak3 [Russell et al. , supra; Miyazaki et al , supra; Tanaka et al , supra]. The expression of both the IL-2R| C chain and Jak3 are restricted to certain cell types [Mmami et al , Ann. Rev. Immunol , 1 1 :245-267 ( 1 993); Johnston et al , supra; Witthuhn et al , supra]. MHC class I antigen induction in γR2/γc cells was observed in response to Hu-IFN-)/ (Figure 4H), but the induction was weaker than in all other cell lines expressing chimeric receptors (Figure 4B, C, E, G) However, by co-expression of γR2lγc together with either Jak1 , Jak2, Jak3 or Tyk2, only Jak3 was shown to be able to restore the biological responsiveness of γR2lγc cel,s to Hu-IFN-)/ (Figure 4H, I). We further showed that Jak3 is phosphorylated upon Hu-IFN-j/ treatment of these cells (Figure 5F). Thus, Jak3 can functionally substitute for Jak2 in the active IFN-)/ receptor complex.
Since the formation of the Statl α homodimeπc DNA-bmding complex as the only binding complex is specific for IFN-)/ signalling, we investigated whether substitution of other kinases for Jak2 would change the specificity of the Jak- Stat signal transduction pathway. The formation of Statl α DNA binding complexes was observed in all cell lines positive in MHC class I antigen induction (Figure 6) By the supershift assay with specific antι-Stat1 σ antibodies we further showed that the GAS binding complexes consisted of Statl α homodimers (Figure 6). Thus, we concluded that other members of the Jak family recruited to the IFN-) receptor complex can substitute for Jak2 without changing the specificity of IFN-)/ signalling in the Jak-Stat pathway. That is, the activation of Statl α during IFN-* signalling does not require the specific participation of Jak2
It was shown recently that there are two splice variants of the IFNAR2 gene: a short form, Hu-IFN-σR2b (σR2b) and a long form, Hu-IFN-σR2c (σR2c). They share the same extracellular and transmembrane domains, but the stop codon of the σR2b is spliced out in the σR2c cDNA resulting in a longer intracellular
domain for σR2c. Only the σR2c variant can complement the mutation in U5A cells defective in IFN-σ signalling and sustain the IFN-σ response [Lutfalla et al , supra]; and together with the Hu-IFN-σR 1 chain can reconstitute an active human IFN-σ receptor complex in mouse cells [Colamonici et al , supra]. Since only the σR2b variant was known at the time of this work, the σR2b intracellular domain was used. After becoming aware of the existence of the σR2c chain, a chimera γR2lαR2c was constructed and expressed in 1 6-9 cells. Hu-IFN- induced MHC class I antigens in R2/σR2c cells to the same extent as in γR2 cells. Thus, because we showed that the R2/σR2b (γR2lαR2) chimera was unable to support IFN- signalling (Figure 4F), we conclude that the intracellular domain of the short form of σR2, σR2b, is unable to bring PTK activity to the IFN-)/ receptor complex in contrast to the σR2c intracellular domain. The box 1 motif (proline rich sequence) which is required for association with Jaks [Lebrun et al. , J. Bio Chem , 270: 10664-10670 ( 1 996); Tanner et al , J. Biol. Chem. , 270:6523-6530 ( 1 995)] is not present in the short σR2b chain [Colamonici et al., supra]. This can explain the failure of σR2b to complement U5A cells (cells lacking σR2b and c) for IFN-σ signalling [Lutfalla et al , supra], as well as the failure to render mouse cells responsive to Hu-IFN-σ [Colamonici et al , supra]
In addition to demonstrating that other Jaks can substitute for Jak2 in IFN- signal transduction, we provide here evidence that the intracellular domain of
CRFB4, a class II cytokine receptor with unknown function [Lutfalla et al , supra (1 993)] associates with Tyk2. Therefore, CRFB4 is likely a component of a ligand-receptor system which activates Tyk2 during signal transduction. Tyk2 was shown to be activated by IFN-σ, CNTF-related cytokines, IL-10 and IL-1 2 [Velazquez et al , supra; Barbieπ et al , supra; Lutticken et al, supra; Stahl et al ,
Science, 263:92-95 (1 994); Finbloom and Winestock, supra; Bacon et al , supra]. Since the components of a given cytokine-receptor complex belong to the same class of the cytokine receptor superfamily, it is most likely that CRFB4 is involved in IFN-σ or IL- 1 0 receptor complexes, as all cloned subunits of these receptors are members of the same class as CRFB4 [Uze et al , supra; Liu et al ,
J. Immunol , 152: 1 821 -1 829 ( 1 994); Novick et a/. , supra] unlike the components of the CNTF-related cytokine receptor subunits and the IL-1 2 receptor. Thus, the use of chimeric receptors provides a method to study the
properties of intracellular domains of receptors from unknown or incompletely characterized ligand-receptor complexes as illustrated with the chimeric receptors containing the intracellular domains of Hu-IFN-σR1 , Hu-IFN-σR2 or CRFB4.
Of most importance, the results described herein show that the Jaks are interchangeable for the Jak-Stat signal transduction pathway. The results allow us to expand our model for IFN-)/ signalling [Kotenko et al , supra], which may be general for class II cytokine receptors (Figure 7). The signal transducing receptor chains can be divided into two classes: ( 1 ) the actual Signal Transducers (ST), containing Stat (or other SH2 domain containing protein)
Recruitment Sites (SRS) and Jak Association Sites (JAS); and (2) Helper Receptors (HR), containing only JAS, but no SRS. The primary function of the HR is to bring additional PTK activity to the receptor complex upon ligand binding. They do not contain functionally important Tyr residues. Thus far two receptors fit this HR category: the IL-2R|/C and IFN-| R2 chains, as it was shown that the substitution of Tyr residues within their intracellular domains does not change the ability of these receptors to support signal transduction [Lai et al , FASEB J. , 9:A1021 (591 7) (1 995); Bach et al., FASEB J. 9:A1021 (591 9) ( 1 995)]. The CRFB4 chain and probably IFN-σR1 are other candidates for helper receptors. In those cases where homodimerization of a single receptor chain appears sufficient for signal transduction and its intracellular domain contains all the JAS and SRS regions necessary and sufficient for signal transduction (as in the case of EPO-R, GHR or ProR), the activation of a single Jak2 is observed and a separate HR chain is not required [Argetsinger et al., Cell, 74:237-244 (1 993); Witthuhn et al., Nature, 370:163-1 57 (1993); Campbell et al., Proc. Natl. Acad.
Sci. USA, 91 :5232-5236 (1 994); DaSilva et al., J. Biol Chem., 269:267-270 ( 1 994); David et al., Proc. Natl. Acad. Sci. USA, 91 :71 74-71 78 ( 1 994); Dusanter-Fourt et al., EMBO J. , 13:2583-2591 ( 1 994); Rui et al., J. Biol. Chem. , 269:5364-5368 ( 1994)]. We hypothesize that the intracellular domains of the HR can be associated with any Jak and do not provide any specificity for signal transduction. Only their extracellular domains are specific for particular ligand receptor complexes. The Jaks show preferential specificity for association with the receptor intracellular domains just like the Stats [Heim et
al., supra; Stahl et al., Science, 267: 1 349-1 353 ( 1 996)], but the kinase domains per se are promiscuous. Finally, it was hypothesized that the Jaks do not contribute to the specificity of signal transduction in the Jak-Stat pathway, inasmuch as they do not posses a preferential specificity for Stat activation.
EXAMPLE 2: MHC Class I Antigen Induction in Hamster Cells in
Response to IL-10
The observation that the expression of Hu-IL- 1 0R alone in mouse or COS7 cells [Liu et al , supra] was sufficient to reconstitute some IL-1 0 signalling suggested that a second chain of the IL-1 0 receptor complex is expressed widely and is not species-specific between mouse, monkey, and human cells. In our experiments with COS1 cells transfected with the IL-1 OR chain, we observed little or no activation of Statl and Stat3. When both IL-1 OR and CRFB4 chains were transfected together into COS 1 cells, there was a very nice activation of these Stats.
On the other hand, we did not see the activation of Stats in hamster cells stably transfected with IL- 1 OR upon IL-10 treatment as measured by electrophoretic mobility shift assay. Since the activity of IL-10 is restricted to certain cell types [Ho and Moore, Ther. Immunol , 1 : 1 73-85 ( 1 994)] and since a ready method to determine the biological activities of IL-1 0 in hamster cells was not available, a chimeric receptor approach was adopted (see Example 1 ) . The intracellular domain of the 1L-10R was substituted with the intracellular domain of the IFN- R1 . To construct chimera IL-lOR/γRl, the PCR reaction was performed with 5'-CGGGGTACCCAGGATGCTGCCGTGCC-3' (SEQ ID NO:25) and 5'- ATCGCTAGCCAGTTGGTCACGGTGAAATAC-3' (SEQ ID NO: 13) primers. The PCR product was digested with Nhel and Kpnl restriction endonucleases and ligated into the Nhel and Kpnl sites of the plasmid pEF2-γRl. The plasmid was designated PEF2-IL-IOR/7RI . It was shown that the IFN-7RI intracellular domain is a signal transducing chain of the IFN-7RI complex that recruits Static, to the complex (Example 1). To enable the IFN-7RI chain to initiate signalling, the IFN-7RI chain requires an additional tyrosine kinase activity which is brought
into the normal IFN-7 receptor complex on the intracellular domain of the IFN- 7R2 (Example 2). Although this function is normally performed by Jak2 kinase associated with the IFN-7R2 intracellular domain, it can also be performed by any tyrosine kinase of the Jak family, including Tyk2, associated with the intracellular domain of the IFN-7R2/X chimeric receptors (Examples 1 and 2). Since Tyk2 is associated with the CRFB4 intracellular domain (Example 2), the IL-IOR/7RI chimeric receptor and CRFB4 chains were postulated to interact upon IL-10 binding so that the intracellular domains of these two chains would mimic the interaction that occurs between the intracellular domains of the normal IFN-7 receptor complex, and would thus initiate signal transduction. Because IFN-7 induces MHC class I antigen expression, we used this cell surface marker was used to determine if IL-10 would signal through the IL-IOR/7RI chain expressed together with the CRFB4 receptor chain.
When the IL-IOR/7RI chimera was expressed alone, it was not able to support signalling upon IL-10 treatment as measured by MHC class I antigen induction
(Figure 9). However, hamster cells stably transfected with both IL-IOR/7RI and CRFB4 chains showed the MHC class I antigen induction in response to IL-10 (Figure 9). This supports the previous observation that the CRFB4 chain is the second subunit of the IL-10 receptor complex. The CRFB4 chain brings the associated Tyk2 to the IL-10 receptor complex upon IL-10 binding and thus initiates signal transduction by IL-10.
EXAMPLE 3: Chimeric Erythropoietin Interferon Gamma Receptors
The present Example demonstrates preparation of a functional chimeric EPR 7RI and EpR/7R2 receptors. The role of IFN-7R2 in the IFN-7 receptor signal transduction complex and the requirements of multimer formation between the two chains was evaluated. A series of chimeric receptors between EpoR and IFN-7RI and IFN-7R2 were constructed. The results suggest that the essential and perhaps only function of the IFN-7R2 intracellular domain is to bring Jak2 into the signal transduction complex. Furthermore, IFN-7R2 serves an important structural role in the configuration of the IFN-7 receptor signal transduction complex.
As discussed above, signal transduction by interferon gamma (IFN-7) involves oligomerization of the two interferon gamma receptor (IFN-7R) subunits, receptor chain 1 (IFN-7RI) which is the ligand-binding chain and the second chain of the receptor (IFN-7R2), upon binding of the ligand. IFN-7 is a symmetrical homodimer that binds two IFN-7RI chains in a species-specific manner, followed by a species-specific interaction between the extracellular domains of IFN-7RI and IFN-7R2. Two kinases, Jakl and Jak2 are involved in IFN-7R signalling. The IFN-7RI chain binds Jakl and the IFN-7R2 chain interacts with Jak2.
The erythropoietin receptor (EpoR), like the IFN-7R, lacks intrinsic kinase activity. It interacts with Jak2 which is activated upon ligand-induced EpoR dimerization. The erythropoietin receptor consists of a single chain which possesses a Jak-association site and a Stat-recruitment site, and appears to be sufficient for ligand-binding as well as signal transduction. On the contrary, the IFN-7RI chain, which also possesses both a Jak-association site and a Stat- recruitment site is alone unable to transduce a signal when bound to its ligand.
Materials And Methods Reagents, Restriction Endonucleases and Other Enzymes. Erythropoietin was produced recombinantly. Restriction endonucleases were from Boehringer Mannheim Biochemicals and New England Biolabs, T4 DNA ligase was from United States Biochemicals; [o.-32P]dCTP was from New England Nuclear. All other reagents were of analytical grade and purchased from Sigma.
Cells and Media. CHO-B7 cells represent the Chinese hamster ovary cell line (CHO-K1) containing a transfected human HLA-B7 gene [Jung et a]. , 1990, supra] . The 16-9 hamster x human somatic hybrid cell line is a CHO-K1 derivative containing a translocation of the long arm of human Chromosome 6 and the human HLA-B7 gene [Soh et al., 1993, supra] . These cells were maintained in F-12 medium (HAM, Life Technologies) containing 10% heat-inactivated fetal bovine serum (Sigma). Transfections were carried out with the DOTAP
transfection reagent (Boehringer Mannheim Biochemicals) according to the manufacturer's protocol and the transfected cells were maintained in F12 medium containing 450 μg/ml geneticin (antibiotic G418).
Construction of Chimeric Receptors. The EpoR expression plasmid was made by cloning the EcoRI- ZIII fragment of the human EpoR cDNA pl8R [Jones et al. ,
Blood 76:31-35 (1990)1 into the EcoK and EcoRV sites of the eukaryotic expression vector pcDNA3 (Invitrogen). The construction of plasmids expressing HU-IFN-7RI and HU-IFN-7R2 chains from cDNA under the control of CMV promoter has been previously described [Kumar et al. , 1989, supra; Jung et al. , 1990, supra; Kotenko et al. , 1995, supra, 1996] . For ease of construction of the various chimeric receptors, the polymerase chain reaction (PCR) was employed to incorporate a unique Nhel site at the 3' end of the extracellular domain (EC) and at the 5' end of the transmembrane-intracellular domains (IC) of the receptors. The primers were designed to code for the three amino acids Trp, Leu and Ala, which are commonly found in the transmembrane domain of several proteins, encompassing the Nhel site. The extracellular portions of EpoR, HU-IFN-7RI and HU-IFN-7R2, containing an Nhel site (designated EpoREC/NM, yKlECINhel and yR2EC/Nhel) were generated by PCR from the respective cDΝAs as templates with the use of the T7 primer (5'-TAATACGACTCACTATA-3') (SEQ ID ΝO:26) and the internal primers 5 ' -GCCGCTAGCCAGGGGTCC AGGTCGCTAGGCG-3 ' ,
(SEQ ID NO:27) corresponding to nucleotides 1874-1893 of pl8R [Jones et a\. , 1990, supra], 5 ' -GTGGCTAGCC A AGA ACCTTTT ATACTGCT-3 ' (SEQ ID NO:28) corresponding to nucleotides 779-785 of HU-IFN-7RI [Aguet et al , 1988, supra] and 5'-ATCGCTAGCCATTGCTGAAGCTCAGTGGAGG-3' (SEQ ID NO: 13) corresponding to nucleotides 1370-1390 of HU-IFN-ΎR2 [Soh et al , 1994, supra] . The intracellular portions of the various receptors with the unique Nhel site at the 5' end of the transmembrane domain (designated EpoRIC/Nzέ?I, \λCINhel and yR2K Nhel were generated by PCR on corresponding cDΝA templates with the use of the SP6 primer (5'-ATTTAGGTGACACTATA-3') (SEQ ID ΝO:29) and the internal primers
5 '-GTGGCTAGCGACGCTCTCCCTCATCCTCG-3 ' (SEQ ID NO: 30) corresponding to nucleotides 1902-1921 of pl8R,
5 '-GTGGCTAGCGATTCCAGTTGTTGCTGCTTTAC-3 ' (SEQ ID NO:31) corresponding to nucleotides 792-814 of HU-IFN-7RI and 5 '-GTGGCTAGCGATCTCCGTGGGAACATTT-3 ' (SEQ ID NO:32) corresponding to nucleotides 1398-1416 of HU-IFN-7R2. The Nhel site in each primer is underlined. The PCR products encoding the extracellular domains were incubated with T4 DNA polymerase and dNTPs to generate blunt ends and subsequently digested with the restriction endonucleases EcoRl(EpoREC/Nhel and yR2ECINhel) or BamHl (yRlECINhel), and cloned into the EcøRV and
EcoRΪIBamϊll sites of the expression vector pcDNA3 (Invitrogen) to yield the plasmids pEpoREC, P7R1EC and p7R2EC. The PCR products encoding the intracellular domains of the various receptors were treated with T4 DNA polymerase to generate blunt ends, digested with Xbal restriction endonuclease and cloned into the EcoRW and Xbal sites of pcDNA3 to yield the plasmids pEpoR,c,
P7R1IC and P7R2IC. To introduce the Statlα binding site of HU-IFN-7RI into the cytoplasmic domain of EpoR, two-step asymmetric PCR was carried out sequentially on HU-IFN-7RI cDNA and pEpoRIC cDNA templates with vector primers and the internal primer CTTGTCCTTCTGTTTTTATTTCagagcaagccacatagetggg (SEQ ID NO: 33). The upper case letters denote sequences of HU-IFN-7RI and the lower case letters represent sequences of EpoR. The HU-IFN-7R2 chain with the Static, binding site of HU-IFN-7RI was constructed by restriction enzyme digestion of P7R2IC and IFN-7RI cDNA with BspEl and Aval respectively, followed by ligation. For construction of the chimeric receptors, plasmids encoding the suitable extracellular or intracellular domains were digested with Nhel and Xbal restriction endonucleases and ligated together. All constructs were sequenced for verification of the entire nucleotide sequence of the receptor. Sequencing was done in an ABI 373 automated DNA sequencer with dideoxy dye-terminator chemistry.
76 Electrophoretic Mobility Shift Assays (EMSA). EMS As were performed with the 22 base pair sequence containing a Statl a binding site
(5'GATCGATTTCCCCGAAATCATG-3') (SEQ ID NO:24) corresponding to the GAS element in the promoter region of the human IRF-1 gene [Yuan et al , Mol. Cell. Biol. 14: 1657-1668 (1994)]. Two oligonucleotides
5'-GATCGATTTCCCCGAAAT-3' (SEQ ID NO: 34) and
5'-CATGATTTCGGGGAAATC-3' (SEQ ID NO:35) were annealed by incubation for 10 minutes at 65 °C, 10 minutes at 37°C and 10 minutes at 22°C, and labeled with [c_-32P]dATP and the Klenow fragment of DNA polymerase I by the filling-in reaction [Sambrook et al , Molecular Cloning: a Laboratory Manual, 2nd ed. ,
Cold Spring Harbor Press (1989)]. Whole-cell extracts were prepared as follows [Dignam et a]. , Nucl. Acids Res. 11: 1475-1489 (1983)] . Cells were grown to confluence in 6-well plates, and harvested by scraping in ice-cold PBS. Cells from each well were washed with 1.0 ml cold PBS, pelleted and resuspended in 100 μl of lysis buffer (10% glycerol, 50 mM Tris**HCl, pH 8.0, 0.5 % NP-40, 150 mM NaCl, 0.1 mM EDTA, 1 mM DTT, 0.2 mM PMSF, and 1 mM Na3VO4, 3 μg/ml aprotinin, 1 μg/ml pepstatin, 1 μg/ml leupeptin). After 30 minutes on ice, the extracts were centrifuged for 5 minutes at full speed in a microfuge and the supernatant was recovered for use in the assay and stored at -80 °C.
EMSA reactions contained 2.5 μl of the whole cell extracts, 1 ng 32P-labeled probe
(specific activity 109 cpm/μg), 24 μg/ml BSA, 160 μg/ml poly(d dC), 20 mM HEPES, pH 7.9, 1 mM MgCl2, 4.0% Ficoll (Pharmacia), 40 mM KC1, 0.1 mM EGTA, and 0.5 mM DTT in a total volume of 12.5 μl. For the supershift assay 1 μl of a 1: 10 dilution of anti-Statlα antibody was included in the reaction. Competition experiments contained a 100-fold excess of the unlabelled oligonucleotide. Reactions were incubated at 24°C for 20 minutes. Then 8 μl of the reaction mixture was electrophoresed at 400V for 3-4 hours at 4°C on a 5 % polyacrylamide (19: 1 acrylamide:bisacrylamide) gel. The dried gel was exposed to Kodak XAR-5 film with an intensifying screen for 12 hours at -80°C.
Antibodies. Rabbit anti-Jakl , anti-Stat 1, and anti-Jak 2 antibodies are described in Example 1.
Immunoprecipitations and Blottings . Cells were stimulated with Hu-IFN-7 (1000 units/ml) or Epo (50 units/ml) for 10 minutes at 37°C. Immunoprecipitations and blottings were performed as described [Kotenko et al , 1995, supra].
Cytofluorographic analysis. Cytofluorographic analysis of cells for surface expression of class I MHC antigens was performed as described previously [Cook et al, Proc. Natl. Acad. Sci. USA 89: 11317-11321(1992); Soh et al, 1993; supra] with mouse anti-human-HLA B-7 monoclonal antibody (W6/32) and FITC- conjugated goat anti-mouse IgG.
Results Construction of Chimeric Receptors. The schematic illustration of the various chimeric receptor molecules that were produced is shown in Figure 10. In one set of chimeric constructs the extracellular domain of the EpoR was spliced to the transmembrane domain and the cytoplasmic domain of each of the two IFN-7R subunits. In the other set of chimeras the transmembrane and intracellular domain of EpoR was attached to the extracellular domain of IFN-7RI and IFN-7R2.
Class I MHC Antigen Induction. In order to investigate the role of the intracellular domain of IFN-7R2 in the signal transduction complex of IFN-7, a chimeric receptor chain consisting of the extracellular domain of IFN-7R2 and the intracellular domain of EpoR was constructed. This chimeric construct, 7R2/EpoR, and the native IFN-7R2 subunit were separately transfected into CHO- B7 as well as 16-9 cells. The ability of the transfected chimeric cDNA to transduce a signal upon induction with Hu-IFN-7 was assayed by measurement of enhanced MHC class I antigen expression in the transfected cells. CHO-B7 cells transfected with IFN-7R2 or 7R2/EpoR cDNA showed no response to Hu-IFN-7 as they lack the ligand-binding receptor subunit, HU-IFN-7RI (data not shown).
CHO-16-9 cells, which contain human Chromosome 6q and express the Hu-IFN- 7RI subunit, showed no response to Hu-IFN-7 (Figure 11 , panel A) but when stably transfected with expression vectors encoding HU-IFN-7R2 cDNA or 7R2/EpoR chimera, exhibited enhanced cell surface expression of class I MHC antigens in response to Hu-IFN-7 (Figure 11 , panels B and C). To assess how effectively the intracellular domain of EpoR could substitute for the intracellular domain of the IFN-7R2 subunit, the induction of MHC class I antigens as a function of the concentration of IFN-7 used to activate the stably transfected cells was measured. As depicted graphically in Figure 12, the chimeric 7R2/EpoR subunit was approximately as effective as native IFN-7R2 in stimulating MHC class I antigen induction in response to Hu-IFN-7. However, there appeared to be a slightly lower induction of MHC class I antigens in the cells containing the chimeric 7R2/EpoR than in the cells containing the native HU-IFN-7R2 chain at each concentration of Hu-IFN-7 used (Figure 12).
The fact that the EpoR intracellular domain can be substituted for the HU-IFN-7R2 intracellular domain shows that another receptor domain that can recruit Jak2 into the signal transduction complex can substitute for the intracellular domain of Hu- IFN-7R2. It is possible that the intracellular domain of HU-IFN-7R2 has additional functions that are also supported by the intracellular domain of EpoR. Since Jak2 is absolutely essential for signal transduction of IFN-7 [Witthuhn et al. ,
1993, supra; Mϋller et al, Nature 366: 129-135 (1993)], it is clear that the intracellular domain of EpoR carries out this function effectively.
Various chimeric receptors between the EpoR and HU-IFN-7RI and HU-IFN-7R2 subunits were constructed in order to gain an understanding of the events involved in the oligomerization of the IFN-7 receptor subunits leading to signal transduction in response to IFN-7. CHO-16-9 cells were stably transfected with expression vectors coding for EpoR, EP0R/7RI, EpoRAyRZ, the combination of EP0R/7RI and EpoR 7R2, and 7RI/EP0R. In response to Epo, the EpoR transfectants showed no response (Figure 11, panel D). The EP0R/7RI transfectants showed
some enhancement of expression of MHC class I antigens (Figure 11 , panel E). However, the transfectants containing both EP0R/7RI and EpoR/7R2 chains exhibited greater expression of MHC class I antigens (Figure 11 , panel F, Figure 13). This shows that the HU-IFN-7RI chain, by itself, possesses or associates δ with, all the requisite components for signal transduction. Its association with the
HU-IFN-7R2 chain upon ligand binding greatly enhances its biological activity, as indicated by the higher activity of the cell line transfected with the two chains: EP0R/7RI and EpoR/7R2. The observation that, on activation by the ligand, the EP0R/7RI chimeric receptor is able to transduce a signal (Figure 11 , panel E) 0 whereas the native IFN-7RI receptor is not, suggested that the basic difference between the two receptor complexes lies in their physical structure, particularly a constraint in the interaction of the extracellular domains. The EP0R/7RI chimeric receptor dimer most likely permits interaction of the two IFN-7RI intracellular domains. In the native IFN-7RI dimer however, the intracellular domains of the 6 two chains are too far apart for them to interact with each other [Walter et al ,
Nature 376:230-235 (1995)]. Consistent with this idea is the observation that cells transfected with expression vector coding for EpoR(p91) chimeric cDNA (EpoR with the p91 recruitment site from IFN-7RI) responds to Epo with enhanced expression of class I MHC antigens while the 7Rl/EpoR(p91) transfectants were 0 unresponsive (Figure 11 , panels G and H). Furthermore, the 7RlAyR2(p91) receptor chain is unable to transduce a signal upon binding ligand, whereas the cells expressing the EpoR/7R2(p91) chimeric receptor exhibited enhanced class I MHC antigen expression in response to activation by ligand (data not shown).
Activation of Stat Proteins. Since one of the earliest events in signal transduction 6 by IFN-7 is activation of the latent transcription factor Static., Stat activation in cells expressing wild-type and chimeric receptors in response to IFN-7 was analyzed. As shown in Figure 14, IFN-7 stimulation resulted in Static, activation in transfected cell lines expressing native IFN-7R2 or 7R2/EpoR chains. Similarly Epo caused activation of Static, in transfected cell lines expressing EP0R/7RI and 0 both EP0R/7RI and EP0R 7R2 receptor chains (Figure 15). Consistent with the
small enhancement in surface expression of class I MHC antigens in cells expressing EP0R/7RI in response to Epo, Static, activation was also lower in these cells compared to cells expressing both EP0R/7RI and EP0R/7R2 chains. Activation of p91 was also observed in cells expressing EpoR(p91) (Figure 15). Furthermore, cells expressing those chimeric receptors containing the EpoR intracellular domain exhibited activation of Stat5 in addition to Static. (Figure 14). Stat5 is phosphorylated on tyrosine in response to Epo in certain cell lines [Ihle and Kerr, Trends in Genetics 11:69-74 (1995)]. The Static, complex is supershifted specifically by the addition of anti-Static, antibody and similarly anti- Stat5 antibody causes a specific shift of the activated Stat5 complex. Addition of
100-fold molar excess of unlabeled GAS oligonucleotide eliminates both Static, and Stat5 activated complexes and inclusion of both anti-Static, and anti-Stat5 antibodies in the reaction resulted in a shift of both bands.
Activation of Jak Kinases. Jak kinases play a central role in mediating signal transduction by various cytokine receptors in response to binding of ligand.
Ligand binding induces receptor aggregation and, in some instances, increases the affinity of the cytoplasmic domain of the receptor for Jak kinases. The resulting increase in Jak kinase concentration in the receptor complex permits their cross- phosphorylation and activation of kinase activity. IFN-7 activates Jakl and Jak2 kinases [Mϋller et al , 1993, supra] whereas Epo activates Jak2 [Witthuhn et al ,
1993, supra] during signal transduction. Thus, the ability of the various chimeric receptors to activate Jakl and Jak2 kinases in response to binding of ligand was tested.
Phosphorylation of Jakl and Jak2 (Figure 16) was examined by immunoprecipitation of cellular lysates with antiphosphotyrosine antibodies followed by a Western blot visualized with specific anti-Jakl and anti-Jak2 antibodies. Both Jakl and Jak2 were phosphorylated in response to Hu-IFN-7 treatment in 16-9 cells expressing parental IFN-7R2 or chimeric 7R2/EpoR receptor. Induction with Epo phosphorylated both Jakl and Jak2 kinase in the cell
line expressing both EpoRAγRl and EpoR 7R2 chains. However, in the cell line expressing only the chimeric EP0R/7RI receptor, only Jakl kinase was phosphorylated in response to Epo, as the cytoplasmic domain of this chimeric receptor lacks a Jak2 association site. The cell line transfected with the 7RI/EP0R chimeric receptor did not exhibit phosphorylation of either Jakl or Jak2 kinase upon IFN-7 treatment. This observation is consistent with the notion that, in an IFN-7RI dimer, the intracellular domains of the two chains are too far apart to permit crossphosphorylation of the associated Jak kinases.
Discussion For many hormones and cytokines, the conversion of the extracellular ligand- binding event to the intracellular signal involves a change in the oligomeric structure of the receptor. This observation has led to the notion that changes in receptor oligomerization may initiate signal transduction. Depending on the ligand, this can take the form of receptor homodimers (Epo, GH), heterodimers (CNTF, LIF), homotrimers (TNF), and more complex assemblies [reviewed by
Stahl and Yancopoulos, Cell, 74:587-590 (1993)]. There is no clear example yet of a protein hormone, growth factor, or cytokine receptor having just a single functional transmembrane chain without a requirement for dimerization or oligomerization.
In the case of IFN-7, its binding to the IFN-7RI receptor chain ensures the specificity of the signal. The subsequent oligomerization, involving IFN-7R2, initiates the signal transduction events. After binding IFN-7, when the receptor dimerizes, the IFN-7RI subunits are phosphorylated on Tyr-457 [Greenlund et al , 1994, supra; Kotenko et al , 1995, supra] by activation of Jakl and Jak2 kinases, followed by activation of the transcription factor Static. [Shuai et al , 1993, supra] . A major function of receptor dimerization may be to bring two receptor- associated kinases together for transactivation. Earlier studies have shown the requirement for the formation of a heteromeric ternary complex comprised of two IFN-7RI chains and two IFN-7R2 chains together with the IFN-7 ligand as the
signal-transducing complex [Kotenko et al. , 1995, supra]. The cytoplasmic domain of the IFN-7R2 subunit binds Jak2 and, upon binding of the ligand and association with the IFN-7RI chain, serves to bring Jak2 kinase into the signal transduction complex [Kotenko et al. , 1995, supra] . This is a crucial event since deletion of the membrane proximal region of the intracellular domain of the IFN-
7R2 chain, which encompasses the Jak2 association site, completely abrogates its ability to transduce signals in response to IFN-7. Thus we propose that the major function of the IFN-7R2 subunit is to bring a Jak2 kinase in apposition to the Jakl kinase on the IFN-7RI subunit. This juxtaposition of the two Jak kinases permits their effective reciprocal transphosphorylation. This is supported by the observation that the IFN-7R2/EpoR chimeric receptor appears to be as effective as the native IFN-7R2 receptor chain in supporting signal transduction in response IFN-7. The IFN-7R2 subunit is a helper receptor subunit, with only a Jak- association site and no Stat- recruitment site. Thus the cytoplasmic domain of any receptor subunit that can bring in a Jak kinase to the IFN-7 receptor complex is functional in supporting signal transduction (See Example 1). Based on the data of Figures 11, 12, and 16, we suggest that the first active kinase that is essential for function of the IFN-7 receptor complex is Jak2, which is recruited by the intracellular domain of the IFN-7R2 chain, and that Jak2 is more effective at phosphorylating Jakl than the latter is at cross-phosphorylating itself. This is consistent with the data of [Briscoe et al. J. Interferon and Cytokine Research, 15(Supplement 1):S56 (1995)] who reported that a Jakl molecule with an inactive kinase domain can replace the normal Jakl in signal transduction by IFN-7.
The absolute requirement for two distinct Jak kinases in the IFN-7 signalling pathway has been demonstrated by the use of kinase-deficient cell lines [Mϋller et al , 1993, supra; Watling et al , Nature 366: 166-170 (1993)]. Based on the results with the chimeric erythropoietin-interferon gamma receptors, we propose that this reflects two features characteristic of the IFN-7 receptor complex: the unique properties of the receptor relative to the positioning of the Jaks, and the
idea that Jakl is relatively ineffective at transphosphorylation in the inactive state whereas Jak2 is quite effective at activating unphosphorylated Jakl kinase.
Unlike the growth hormone-receptor complex [De Vos et al , Science, 255:306- 312 (1992)] and the EpoR dimer [Watowich et al , 1994, supra], when one IFN-7 homodimer binds two IFN-7RI molecules, the two receptor subunits do not interact with one another and are separated by 27 A [Walter et al , 1995, supra] at their closest point. Therefore, though the IFN-7RI chain possesses both a Jak kinase-association site and a Stat-recruitment site, it is alone unable to transduce a signal on homodimerization as the two Jakl kinases are not in physical proximity to activate each other (Figure 17). The signal-transducing complex of IFN-7 most likely consists of the IFN-7 homodimer bound to two IFN-7RI and two IFN-7R2 chains (Example 1 , supra). Binding of IFN-7 to IFN-7RI facilitates its oligomerization with IFN-7R2, which recruits Jak2 into the receptor complex to initiate signal transduction.
That Jakl is relatively ineffective alone in transphosphorylation is supported by the observation that cells expressing the EP0R/7RI chimera are quantitatively less active in the biological assays than are the cells expressing both EP0R 7RI and EpoR/7R2 chimeric receptor chains. Thus, though homodimerization of the EP0R/7RI receptor by Epo brings the cytoplasmic domains of the two 7RI subunits into close enough proximity to transduce a signal on homodimerization, the two Jakl kinases do not transactivate each other as efficiently as they are activated by Jak2. It should, however, also be considered that the physical conformation of the intracellular domains of the EP0R/7RI chimeric receptor homodimer may be different from that of the intracellular domains of the native IFN-7RI receptor homodimers, permitting a low-level activation of the two adjoining Jakl kinase molecules.
In the case of the EP0R/7RI - EpoR/7R2 dimer, one Jakl and one Jak2 kinase are in close apposition for Jak2 to phosphorylate Jakl and set in motion efficient
downstream signaling events. That Jakl plays an important structural role in the IFN-7 receptor complex is suggested by the observation that cells expressing the EpoR/7R2(p91) chimeric receptor subunit are muted in their biological responses compared to cells expressing both EP0R/7RI and EP0R/7R2.
In cells expressing both EpoRAyRl and EpoR/72 receptor chains, binding of the ligand Epo can induce the formation of three types of receptor dimers: EP0R/7RI homodimers, EpoR/72 homodimers and EP0R/7RI-EP0R 7R2 heterodimers. The EP0R/7RI homodimer is only weakly active and the EP0R/7R2 homodimer is inactive. The functional receptor complex therefore must be the EpoRΛyRl- EpoR/7R2 hetero-oligomer, with the two receptor subunits in a 1 : 1 ratio. It remains to be conclusively demonstrated, however, if the active chimeric EpoR receptor complex is a heterodimer or a heterotetramer. In the former case the phosphorylated Stati , from each receptor dimer would be released into the cytoplasm where it dimerizes. In the latter case two phosphorylated Statlα molecules in each tetrameric receptor complex would dimerize and then be released from the receptor complex. The EpoR is only known to form a dimer; however, in all receptor complexes that activate Stats thus far studied, at least two Stat molecules per receptor complex are recruited. Therefore it is thought that the phosphorylated Stats dimerize on the receptor complex where they are in close proximity and are subsequently released. The activation of Stat lα, then, indirectly supports a conclusion that the EpoR/7R2 chimeric receptors form a heterotetrameric complex.
A model for the signal transduction of the IFN-7R complex is shown in Figure 17, which illustrates schematically the structures of the various receptor complexes. The IFN-7 homodimer binds to two IFN-7RI chains, followed by its interaction with two IFN-7R2 chains. Although Jakl binds to the intracellular domain of IFN-7RI , a functional kinase activity on Jakl is probably not required for signal transduction [Briscoe et al , 1995, supra]. Thus the first active kinase that is essential for function of the IFN-7R complex is Jak2 which is recruited by the
intracellular domain of the IFN-7R2 chain. When the receptor oligomerizes, two Jak2 kinases per receptor complex are incorporated into the active complex. We suggest that Jak2 phosphorylates Jakl, following which either kinase phosphorylates tyrosine 457 of the IFN-7RI chain. Phosphorylation of the IFN- 7RI chain is an absolute requirement for its function [Cook et al , 1992, supra;
Farrar et al , Proc. Natl. Acad. Sci. USA. 89: 11706-11710 (1992); Greenlund et al , 1994, supra]. The phosphorylated segment of each IFN-7RI chain then recruits unphosphorylated Static, to the complex, which is then phosphorylated by Jak2 or Jakl kinase. The phosphorylation of the Static, molecules causes their release from the receptor complex and their subsequent dimerization to form the active Static, transcription unit, which translocates into the nucleus. Jak2 and the associated IFN-7R2 chain thus play a pivotal role in the signal transduction process.
The highly species-specific interaction of the extracellular domain of the IFN-7R2 chain with the extracellular domain of the IFN-7RI chain-IFN-7 ligand complex provides for specific signal transduction established by IFN-7 [Jung et al , 1987, supra; Hibino et al , 1992, supra; Hemmi et a]., 1992, supra; Gibbs et al , (1991) supra] . In normal cells, other receptor components that can recruit Jak2 to their respective complexes cannot substitute for the specific IFN-7R2 chain unless they have the specific IFN-7R2 chain extracellular domain.
The Jak kinases do not mediate ligand selectivity and seem to be promiscuous in their activity as shown in Example 1 , which demonstrates that each of the Jak kinases can substitute for Jak2 in signal transduction by IFN-7. Selectivity is likely maintained from the extracellular receptor-ligand interaction to the final signal transduction mechanism by other specific regions of the intracellular domains. For example, Heim et al Science, 267: 1347-1349 (1995) suggested that the SH2 recognition domain of Statlα maintains some of the specificity. It remains to be established, however, how Statlα can be activated by many different cytokines and their receptors and maintain specificity through the final
transcription activation step. Our current data delineate the role of the intracellular domain of the IFN-7R2 chain in the IFN-7 signal transduction complex. Furthermore, it is possible that the simultaneous recruitment of Jak2 by other cytokines to their own receptors on the cell surface increasing the subcytoplasmic membrane concentration of Jak2 may explain some of the cross talk among the biochemical mechanisms of cytokines and growth factors.
Finally, but not unimportantly, the present Example clearly demonstrates the unexpected ability to reconstitute a highly complex signal transduction pathway involving a heterotetrameric receptor complex with chimeric receptors.
EXAMPLE 4: A Functional Immunoglobulin/Interferon-7 Chimeric
Receptor
A synthetic receptor to a tumor-associated antigen TAG72 was prepared, using the heavy chain antigen binding domain joined to IFN-7RI , and the light chain antigen binding domain joined to IFN-7R2. Cells transfected with plasmids encoding for the chimeric receptors were activated when exposed to fixed (antigenic) cells carrying the tumor-associated antigen TAG72.
Materials and Methods Chimeric constructs. To construct chimera L1/R2 the PCR reaction was performed with 5'-ATTCGGATCCAGGATGGATTC-3' (SEQ ID NO:35) and 5'-CGGCGCTAGCCACTGCTGTTCCAGCACCAGCTTGGTC-3' (SEQ ID
NO:36) primers with light chain gene of HuCC49 as a template [Kashmiri et al. , Hybridoma 14:461-473 (1995)] . A BamHl or Nhel restriction site was present in the oligonucleotides above, respectively. The PCR product was digested with Nhel and BamHl restriction endonucleases and ligated into the Nhel and BamHl sites of the plasmid pR2/R2. The resultant plasmid was designated pLl/R2. The aminoglycoside phosphotransferase gene (this gene encodes the protein rendering mammalian cells resistant to antibiotic G418) was disrupted by digestion of the pLl/R2 plasmid with Nαrl and Sful restriction endonucleases and religation of the plasmid DΝA.
To construct chimera Hl/Rl, the PCR reaction was performed with 5'-CCAGTGGATCCCCCGGGCTG-3' (SEQ ID NO 37) and 5'-CGGCGCTAGCCATTTGGCTGAGGAGACGGTG-3' (SEQ ID NO 38) primers and the heavy chain gene of HuCC49 as a template [Kashmiri et al. , supra] with the BamHl and Nhel restriction sites present in the o gonucleotides above, respectively The PCR product was digested with Nhel and BamHl restriction endonucleases and ligated into the Nhel and BamHl sites of the plasmid pR2/Rl . The resultant plasmid was designated pill /Rl The neo gene that conferred resistance to antibiotic G418 was retained on this plasmid
Cells were stably cotransfected with the expression vectors (1-3 g of super-coiled plasmid DNA with the neo gene and a 10-fold excess of plasmid DNA without neoR gene per 105-106 cells) with LipofectAMINE™ Reagent (Life Technologies, Inc.) according to the manufacturer's instructions tor stable transfection of adherent and suspension cells All cell lines transfected with plasmids carrying the neoκ gene were selected and maintained in medium containing 450 μg/ml of antibiotic G418. Complete F12 medium with 10% FBS was used tor 16-9 cells, and complete RPMI 1640 medium supplemented with 10% FBS and 10% of conditioned medium from NIH3T3 cells expressing IL-2 for CTL1-2 cells
Results and Discussion 16-19 cells were co-transfected with two expression plasmids encoding chimeric antibody -receptor molecules LI/7R2 (VL domain of light chain of the cc49 antibody fused to the transmembrane and intracellular domains of human IFN-7R2 chain) and HI/7RI (VL domain of heavy chain of cc49 antibody fused to the transmembrane and intracellular domains of human IFN-7RI chain) These cells, and untransfected parental 16-9 controls, were treated or left untreated with paraformadehyde fixed MCF-7 clone 4C10 cells f i 72 hours MCF-7 cells express the TAG72 antigen HLA-B7 antigen expression was detected by treatment of cells with mouse anti-HLA monoclonal antibody W6/32, followed by treatment with FITC-conjugated goat anti-mouse IgG As shown in Figure 18, co-
transfected cells that expressed HI/7RI-LI/7R2 responded to the antigen, whereas control cells and unchallenged cells did not.
The two expression plasmids encoding chimeric antibody-receptor molecules LI/7R2 and HI/7RI were also co-transfected into mouse CTLl-2 cells, δ Expression of the chimeric antibodies on the cell surface of 16-9 and CTLl-2 cells was detected by treatment of cells with FITC-conjugated goat anti-mouse IgG. The cells were then analyzed by cytofluorography. As shown in Figure 19, both 16-9 and CTLl-2 cells co-transfected with the LI/7R2 and HI/7RI expression vectors have detectable antibody on their surface, whereas un-co-transfected 0 controls lack antibody.
These data show that a chimeric antibody /IFN-7 receptor complex is able to generate the signal transduction event analogous to that procedure by interferon gamm (IFN7). Signal transduction was stimulated by interacting the synthetic receptor carrying the variable region of the antibody that reacts with the tumor- δ associated antigen TAG72 that is expressed on the breast carcinoma cell line
MCF07 (Figure 18). Synthetic receptor molecules carrying heavy and light chain domains are expressed in both the 16-9 and CTLl-2 cells (Figure 19).
The present invention is not to be limited in scope by the specific embodiments describe herein. Indeed, various modifications of the invention in addition to 0 those described herein will become apparent to those skilled in the art from the foregoing description and the accompanying figures. Such modifications are intended to fall within the scope of the appended claims.
It is further to be understood that all base sizes or amino acid sizes, and all molecular weight or molecular mass values, given for nucleic acids or 5 polypeptides are approximate, and are provided for description.
Various publications are cited herein, the disclosures of which are incorporated by reference in their entireties.