WO1997019039A1 - Synthese en phase solide de composes heterocycliques et d'une banque combinatoire de composes - Google Patents
Synthese en phase solide de composes heterocycliques et d'une banque combinatoire de composes Download PDFInfo
- Publication number
- WO1997019039A1 WO1997019039A1 PCT/EP1996/004808 EP9604808W WO9719039A1 WO 1997019039 A1 WO1997019039 A1 WO 1997019039A1 EP 9604808 W EP9604808 W EP 9604808W WO 9719039 A1 WO9719039 A1 WO 9719039A1
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- WO
- WIPO (PCT)
- Prior art keywords
- solid phase
- phase synthesis
- synthesis according
- alkyl
- substituted
- Prior art date
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- 150000001875 compounds Chemical class 0.000 title claims description 42
- 238000010532 solid phase synthesis reaction Methods 0.000 title claims description 27
- 150000002391 heterocyclic compounds Chemical class 0.000 title description 4
- 238000006243 chemical reaction Methods 0.000 claims abstract description 24
- 125000000623 heterocyclic group Chemical group 0.000 claims abstract description 11
- 229920005989 resin Polymers 0.000 claims description 41
- 239000011347 resin Substances 0.000 claims description 41
- 125000004435 hydrogen atom Chemical group [H]* 0.000 claims description 18
- -1 thiantrenyl Chemical group 0.000 claims description 16
- 239000007787 solid Substances 0.000 claims description 13
- 239000001257 hydrogen Substances 0.000 claims description 12
- 229910052739 hydrogen Inorganic materials 0.000 claims description 12
- 238000000034 method Methods 0.000 claims description 12
- 238000003512 Claisen condensation reaction Methods 0.000 claims description 8
- 125000004169 (C1-C6) alkyl group Chemical group 0.000 claims description 7
- 230000002378 acidificating effect Effects 0.000 claims description 7
- 125000003118 aryl group Chemical group 0.000 claims description 7
- 239000002245 particle Substances 0.000 claims description 6
- 125000001997 phenyl group Chemical group [H]C1=C([H])C([H])=C(*)C([H])=C1[H] 0.000 claims description 6
- 229910052794 bromium Inorganic materials 0.000 claims description 5
- 229910052801 chlorine Inorganic materials 0.000 claims description 5
- 125000001495 ethyl group Chemical group [H]C([H])([H])C([H])([H])* 0.000 claims description 5
- 229910052740 iodine Inorganic materials 0.000 claims description 5
- UHOVQNZJYSORNB-UHFFFAOYSA-N monobenzene Natural products C1=CC=CC=C1 UHOVQNZJYSORNB-UHFFFAOYSA-N 0.000 claims description 5
- 239000012038 nucleophile Substances 0.000 claims description 5
- 238000011911 α-alkylation Methods 0.000 claims description 5
- 125000006727 (C1-C6) alkenyl group Chemical group 0.000 claims description 4
- 125000001931 aliphatic group Chemical group 0.000 claims description 4
- 125000002541 furyl group Chemical group 0.000 claims description 4
- 239000003446 ligand Substances 0.000 claims description 4
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 claims description 4
- 125000001624 naphthyl group Chemical group 0.000 claims description 4
- 125000004957 naphthylene group Chemical group 0.000 claims description 4
- 125000003373 pyrazinyl group Chemical group 0.000 claims description 4
- 125000004076 pyridyl group Chemical group 0.000 claims description 4
- 125000001544 thienyl group Chemical group 0.000 claims description 4
- 125000002915 carbonyl group Chemical group [*:2]C([*:1])=O 0.000 claims description 3
- 230000000269 nucleophilic effect Effects 0.000 claims description 3
- 229910052760 oxygen Inorganic materials 0.000 claims description 3
- 125000000843 phenylene group Chemical group C1(=C(C=CC=C1)*)* 0.000 claims description 3
- 238000002360 preparation method Methods 0.000 claims description 3
- 125000002294 quinazolinyl group Chemical group N1=C(N=CC2=CC=CC=C12)* 0.000 claims description 3
- 239000012429 reaction media Substances 0.000 claims description 3
- 238000012216 screening Methods 0.000 claims description 3
- 125000005556 thienylene group Chemical group 0.000 claims description 3
- 125000003178 carboxy group Chemical group [H]OC(*)=O 0.000 claims description 2
- 239000007795 chemical reaction product Substances 0.000 claims description 2
- 125000000259 cinnolinyl group Chemical group N1=NC(=CC2=CC=CC=C12)* 0.000 claims description 2
- 125000005677 ethinylene group Chemical group [*:2]C#C[*:1] 0.000 claims description 2
- 229910052731 fluorine Inorganic materials 0.000 claims description 2
- 229910052736 halogen Inorganic materials 0.000 claims description 2
- 125000003453 indazolyl group Chemical group N1N=C(C2=C1C=CC=C2)* 0.000 claims description 2
- 125000003406 indolizinyl group Chemical group C=1(C=CN2C=CC=CC12)* 0.000 claims description 2
- 125000001977 isobenzofuranyl group Chemical group C=1(OC=C2C=CC=CC12)* 0.000 claims description 2
- 125000001786 isothiazolyl group Chemical group 0.000 claims description 2
- 125000000842 isoxazolyl group Chemical group 0.000 claims description 2
- 125000004593 naphthyridinyl group Chemical group N1=C(C=CC2=CC=CN=C12)* 0.000 claims description 2
- 125000004592 phthalazinyl group Chemical group C1(=NN=CC2=CC=CC=C12)* 0.000 claims description 2
- 125000003226 pyrazolyl group Chemical group 0.000 claims description 2
- 125000005551 pyridylene group Chemical group 0.000 claims description 2
- 125000000714 pyrimidinyl group Chemical group 0.000 claims description 2
- 125000000168 pyrrolyl group Chemical group 0.000 claims description 2
- 125000005493 quinolyl group Chemical group 0.000 claims description 2
- 125000001567 quinoxalinyl group Chemical group N1=C(C=NC2=CC=CC=C12)* 0.000 claims description 2
- 125000006850 spacer group Chemical group 0.000 claims description 2
- 125000000218 acetic acid group Chemical group C(C)(=O)* 0.000 claims 2
- 125000004178 (C1-C4) alkyl group Chemical group 0.000 claims 1
- 125000000217 alkyl group Chemical group 0.000 claims 1
- 150000002367 halogens Chemical group 0.000 claims 1
- 125000005344 pyridylmethyl group Chemical group [H]C1=C([H])C([H])=C([H])C(=N1)C([H])([H])* 0.000 claims 1
- WTKZEGDFNFYCGP-UHFFFAOYSA-N Pyrazole Chemical compound C=1C=NNC=1 WTKZEGDFNFYCGP-UHFFFAOYSA-N 0.000 abstract description 4
- CTAPFRYPJLPFDF-UHFFFAOYSA-N isoxazole Chemical compound C=1C=NOC=1 CTAPFRYPJLPFDF-UHFFFAOYSA-N 0.000 abstract description 4
- 239000007790 solid phase Substances 0.000 abstract description 4
- 238000013459 approach Methods 0.000 abstract description 3
- IAZDPXIOMUYVGZ-UHFFFAOYSA-N Dimethylsulphoxide Chemical compound CS(C)=O IAZDPXIOMUYVGZ-UHFFFAOYSA-N 0.000 description 27
- QTBSBXVTEAMEQO-UHFFFAOYSA-N Acetic acid Chemical compound CC(O)=O QTBSBXVTEAMEQO-UHFFFAOYSA-N 0.000 description 18
- YMWUJEATGCHHMB-UHFFFAOYSA-N Dichloromethane Chemical compound ClCCl YMWUJEATGCHHMB-UHFFFAOYSA-N 0.000 description 16
- WYURNTSHIVDZCO-UHFFFAOYSA-N Tetrahydrofuran Chemical compound C1CCOC1 WYURNTSHIVDZCO-UHFFFAOYSA-N 0.000 description 14
- 239000000047 product Substances 0.000 description 10
- 238000004128 high performance liquid chromatography Methods 0.000 description 8
- FZTIWOBQQYPTCJ-UHFFFAOYSA-N 4-[4-(4-carboxyphenyl)phenyl]benzoic acid Chemical compound C1=CC(C(=O)O)=CC=C1C1=CC=C(C=2C=CC(=CC=2)C(O)=O)C=C1 FZTIWOBQQYPTCJ-UHFFFAOYSA-N 0.000 description 7
- 125000002777 acetyl group Chemical group [H]C([H])([H])C(*)=O 0.000 description 7
- 239000011541 reaction mixture Substances 0.000 description 7
- 230000015572 biosynthetic process Effects 0.000 description 6
- 239000003153 chemical reaction reagent Substances 0.000 description 6
- 238000003776 cleavage reaction Methods 0.000 description 6
- 239000011261 inert gas Substances 0.000 description 6
- 230000007017 scission Effects 0.000 description 6
- 229910000104 sodium hydride Inorganic materials 0.000 description 6
- 238000003786 synthesis reaction Methods 0.000 description 6
- 238000012360 testing method Methods 0.000 description 6
- KEAYESYHFKHZAL-UHFFFAOYSA-N Sodium Chemical compound [Na] KEAYESYHFKHZAL-UHFFFAOYSA-N 0.000 description 5
- 150000001733 carboxylic acid esters Chemical class 0.000 description 5
- 239000003795 chemical substances by application Substances 0.000 description 5
- 230000008878 coupling Effects 0.000 description 5
- 238000010168 coupling process Methods 0.000 description 5
- 238000005859 coupling reaction Methods 0.000 description 5
- NPZTUJOABDZTLV-UHFFFAOYSA-N hydroxybenzotriazole Substances O=C1C=CC=C2NNN=C12 NPZTUJOABDZTLV-UHFFFAOYSA-N 0.000 description 5
- 238000011068 loading method Methods 0.000 description 5
- 239000013034 phenoxy resin Substances 0.000 description 5
- 229920006287 phenoxy resin Polymers 0.000 description 5
- 238000006798 ring closing metathesis reaction Methods 0.000 description 5
- 239000012312 sodium hydride Substances 0.000 description 5
- 125000003088 (fluoren-9-ylmethoxy)carbonyl group Chemical group 0.000 description 4
- IAZDPXIOMUYVGZ-WFGJKAKNSA-N Dimethyl sulfoxide Chemical compound [2H]C([2H])([2H])S(=O)C([2H])([2H])[2H] IAZDPXIOMUYVGZ-WFGJKAKNSA-N 0.000 description 4
- RPTUSVTUFVMDQK-UHFFFAOYSA-N Hidralazin Chemical compound C1=CC=C2C(NN)=NN=CC2=C1 RPTUSVTUFVMDQK-UHFFFAOYSA-N 0.000 description 4
- KFZMGEQAYNKOFK-UHFFFAOYSA-N Isopropanol Chemical compound CC(C)O KFZMGEQAYNKOFK-UHFFFAOYSA-N 0.000 description 4
- FXHOOIRPVKKKFG-UHFFFAOYSA-N N,N-Dimethylacetamide Chemical compound CN(C)C(C)=O FXHOOIRPVKKKFG-UHFFFAOYSA-N 0.000 description 4
- 238000010521 absorption reaction Methods 0.000 description 4
- 239000002168 alkylating agent Substances 0.000 description 4
- 229940100198 alkylating agent Drugs 0.000 description 4
- 239000000543 intermediate Substances 0.000 description 4
- QPJVMBTYPHYUOC-UHFFFAOYSA-N methyl benzoate Chemical compound COC(=O)C1=CC=CC=C1 QPJVMBTYPHYUOC-UHFFFAOYSA-N 0.000 description 4
- CMWYAOXYQATXSI-UHFFFAOYSA-N n,n-dimethylformamide;piperidine Chemical compound CN(C)C=O.C1CCNCC1 CMWYAOXYQATXSI-UHFFFAOYSA-N 0.000 description 4
- FPGGTKZVZWFYPV-UHFFFAOYSA-M tetrabutylammonium fluoride Chemical compound [F-].CCCC[N+](CCCC)(CCCC)CCCC FPGGTKZVZWFYPV-UHFFFAOYSA-M 0.000 description 4
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 description 3
- AVXURJPOCDRRFD-UHFFFAOYSA-N Hydroxylamine Chemical compound ON AVXURJPOCDRRFD-UHFFFAOYSA-N 0.000 description 3
- LCTONWCANYUPML-UHFFFAOYSA-N Pyruvic acid Chemical compound CC(=O)C(O)=O LCTONWCANYUPML-UHFFFAOYSA-N 0.000 description 3
- 239000002253 acid Substances 0.000 description 3
- 230000029936 alkylation Effects 0.000 description 3
- 238000005804 alkylation reaction Methods 0.000 description 3
- 238000010511 deprotection reaction Methods 0.000 description 3
- 125000005594 diketone group Chemical group 0.000 description 3
- 239000000203 mixture Substances 0.000 description 3
- 238000007363 ring formation reaction Methods 0.000 description 3
- 238000007086 side reaction Methods 0.000 description 3
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 3
- 0 ***C1C(*)C(*)=N*1 Chemical compound ***C1C(*)C(*)=N*1 0.000 description 2
- MYRTYDVEIRVNKP-UHFFFAOYSA-N 1,2-Divinylbenzene Chemical compound C=CC1=CC=CC=C1C=C MYRTYDVEIRVNKP-UHFFFAOYSA-N 0.000 description 2
- 238000005160 1H NMR spectroscopy Methods 0.000 description 2
- WEVYAHXRMPXWCK-UHFFFAOYSA-N Acetonitrile Chemical compound CC#N WEVYAHXRMPXWCK-UHFFFAOYSA-N 0.000 description 2
- 239000004793 Polystyrene Substances 0.000 description 2
- YRKCREAYFQTBPV-UHFFFAOYSA-N acetylacetone Chemical compound CC(=O)CC(C)=O YRKCREAYFQTBPV-UHFFFAOYSA-N 0.000 description 2
- 239000011324 bead Substances 0.000 description 2
- 230000001588 bifunctional effect Effects 0.000 description 2
- 239000006227 byproduct Substances 0.000 description 2
- 239000006185 dispersion Substances 0.000 description 2
- MTZQAGJQAFMTAQ-UHFFFAOYSA-N ethyl benzoate Chemical compound CCOC(=O)C1=CC=CC=C1 MTZQAGJQAFMTAQ-UHFFFAOYSA-N 0.000 description 2
- 125000005843 halogen group Chemical group 0.000 description 2
- 150000002390 heteroarenes Chemical class 0.000 description 2
- 229960002474 hydralazine Drugs 0.000 description 2
- 150000002429 hydrazines Chemical class 0.000 description 2
- 229940095102 methyl benzoate Drugs 0.000 description 2
- 239000002480 mineral oil Substances 0.000 description 2
- 235000010446 mineral oil Nutrition 0.000 description 2
- 239000012071 phase Substances 0.000 description 2
- 229920002223 polystyrene Polymers 0.000 description 2
- 239000000376 reactant Substances 0.000 description 2
- 238000000926 separation method Methods 0.000 description 2
- 125000001424 substituent group Chemical group 0.000 description 2
- PNHBRYIAJCYNDA-VQCQRNETSA-N (4r)-6-[2-[2-ethyl-4-(4-fluorophenyl)-6-phenylpyridin-3-yl]ethyl]-4-hydroxyoxan-2-one Chemical compound C([C@H](O)C1)C(=O)OC1CCC=1C(CC)=NC(C=2C=CC=CC=2)=CC=1C1=CC=C(F)C=C1 PNHBRYIAJCYNDA-VQCQRNETSA-N 0.000 description 1
- WSLDOOZREJYCGB-UHFFFAOYSA-N 1,2-Dichloroethane Chemical compound ClCCCl WSLDOOZREJYCGB-UHFFFAOYSA-N 0.000 description 1
- UPMGJEMWPQOACJ-UHFFFAOYSA-N 2-[4-[(2,4-dimethoxyphenyl)-(9h-fluoren-9-ylmethoxycarbonylamino)methyl]phenoxy]acetic acid Chemical compound COC1=CC(OC)=CC=C1C(C=1C=CC(OCC(O)=O)=CC=1)NC(=O)OCC1C2=CC=CC=C2C2=CC=CC=C21 UPMGJEMWPQOACJ-UHFFFAOYSA-N 0.000 description 1
- VODKOOOHHCAWFR-UHFFFAOYSA-N 2-iodoacetonitrile Chemical compound ICC#N VODKOOOHHCAWFR-UHFFFAOYSA-N 0.000 description 1
- KWOLFJPFCHCOCG-UHFFFAOYSA-N Acetophenone Chemical compound CC(=O)C1=CC=CC=C1 KWOLFJPFCHCOCG-UHFFFAOYSA-N 0.000 description 1
- 241000252095 Congridae Species 0.000 description 1
- 238000010934 O-alkylation reaction Methods 0.000 description 1
- RHQDFWAXVIIEBN-UHFFFAOYSA-N Trifluoroethanol Chemical compound OCC(F)(F)F RHQDFWAXVIIEBN-UHFFFAOYSA-N 0.000 description 1
- 150000001351 alkyl iodides Chemical class 0.000 description 1
- BHELZAPQIKSEDF-UHFFFAOYSA-N allyl bromide Chemical compound BrCC=C BHELZAPQIKSEDF-UHFFFAOYSA-N 0.000 description 1
- VQGHOUODWALEFC-UHFFFAOYSA-N alpha-Phenylpyridine Natural products C1=CC=CC=C1C1=CC=CC=N1 VQGHOUODWALEFC-UHFFFAOYSA-N 0.000 description 1
- 150000001409 amidines Chemical class 0.000 description 1
- 238000003491 array Methods 0.000 description 1
- 150000001558 benzoic acid derivatives Chemical class 0.000 description 1
- AGEZXYOZHKGVCM-UHFFFAOYSA-N benzyl bromide Chemical compound BrCC1=CC=CC=C1 AGEZXYOZHKGVCM-UHFFFAOYSA-N 0.000 description 1
- 150000001732 carboxylic acid derivatives Chemical class 0.000 description 1
- 229940125872 compound 4d Drugs 0.000 description 1
- 239000000470 constituent Substances 0.000 description 1
- 238000007334 copolymerization reaction Methods 0.000 description 1
- 230000001627 detrimental effect Effects 0.000 description 1
- HBGGXOJOCNVPFY-UHFFFAOYSA-N diisononyl phthalate Chemical compound CC(C)CCCCCCOC(=O)C1=CC=CC=C1C(=O)OCCCCCCC(C)C HBGGXOJOCNVPFY-UHFFFAOYSA-N 0.000 description 1
- 238000007876 drug discovery Methods 0.000 description 1
- 230000000694 effects Effects 0.000 description 1
- 150000002148 esters Chemical class 0.000 description 1
- PQJJJMRNHATNKG-UHFFFAOYSA-N ethyl bromoacetate Chemical compound CCOC(=O)CBr PQJJJMRNHATNKG-UHFFFAOYSA-N 0.000 description 1
- 125000002534 ethynyl group Chemical group [H]C#C* 0.000 description 1
- 238000011156 evaluation Methods 0.000 description 1
- JVZRCNQLWOELDU-UHFFFAOYSA-N gamma-Phenylpyridine Natural products C1=CC=CC=C1C1=CC=NC=C1 JVZRCNQLWOELDU-UHFFFAOYSA-N 0.000 description 1
- 238000007429 general method Methods 0.000 description 1
- 238000010438 heat treatment Methods 0.000 description 1
- 125000001072 heteroaryl group Chemical group 0.000 description 1
- 125000002887 hydroxy group Chemical group [H]O* 0.000 description 1
- 239000012535 impurity Substances 0.000 description 1
- 230000002401 inhibitory effect Effects 0.000 description 1
- 125000005956 isoquinolyl group Chemical group 0.000 description 1
- 239000000463 material Substances 0.000 description 1
- 238000002156 mixing Methods 0.000 description 1
- 230000004048 modification Effects 0.000 description 1
- 238000012986 modification Methods 0.000 description 1
- HDZGCSFEDULWCS-UHFFFAOYSA-N monomethylhydrazine Chemical compound CNN HDZGCSFEDULWCS-UHFFFAOYSA-N 0.000 description 1
- 150000002828 nitro derivatives Chemical class 0.000 description 1
- 238000005457 optimization Methods 0.000 description 1
- 125000004430 oxygen atom Chemical group O* 0.000 description 1
- 238000010647 peptide synthesis reaction Methods 0.000 description 1
- LIGACIXOYTUXAW-UHFFFAOYSA-N phenacyl bromide Chemical compound BrCC(=O)C1=CC=CC=C1 LIGACIXOYTUXAW-UHFFFAOYSA-N 0.000 description 1
- 239000002243 precursor Substances 0.000 description 1
- 230000008569 process Effects 0.000 description 1
- 108090000765 processed proteins & peptides Proteins 0.000 description 1
- 108090000623 proteins and genes Proteins 0.000 description 1
- 102000004169 proteins and genes Human genes 0.000 description 1
- 125000005550 pyrazinylene group Chemical group 0.000 description 1
- 150000003230 pyrimidines Chemical class 0.000 description 1
- 230000009467 reduction Effects 0.000 description 1
- 238000010992 reflux Methods 0.000 description 1
- 239000002904 solvent Substances 0.000 description 1
- 238000010561 standard procedure Methods 0.000 description 1
- 239000007858 starting material Substances 0.000 description 1
- 230000009897 systematic effect Effects 0.000 description 1
- 230000009466 transformation Effects 0.000 description 1
- 238000000844 transformation Methods 0.000 description 1
- 238000010200 validation analysis Methods 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D231/00—Heterocyclic compounds containing 1,2-diazole or hydrogenated 1,2-diazole rings
- C07D231/02—Heterocyclic compounds containing 1,2-diazole or hydrogenated 1,2-diazole rings not condensed with other rings
- C07D231/10—Heterocyclic compounds containing 1,2-diazole or hydrogenated 1,2-diazole rings not condensed with other rings having two or three double bonds between ring members or between ring members and non-ring members
- C07D231/12—Heterocyclic compounds containing 1,2-diazole or hydrogenated 1,2-diazole rings not condensed with other rings having two or three double bonds between ring members or between ring members and non-ring members with only hydrogen atoms, hydrocarbon or substituted hydrocarbon radicals, directly attached to ring carbon atoms
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D261/00—Heterocyclic compounds containing 1,2-oxazole or hydrogenated 1,2-oxazole rings
- C07D261/02—Heterocyclic compounds containing 1,2-oxazole or hydrogenated 1,2-oxazole rings not condensed with other rings
- C07D261/06—Heterocyclic compounds containing 1,2-oxazole or hydrogenated 1,2-oxazole rings not condensed with other rings having two or more double bonds between ring members or between ring members and non-ring members
- C07D261/08—Heterocyclic compounds containing 1,2-oxazole or hydrogenated 1,2-oxazole rings not condensed with other rings having two or more double bonds between ring members or between ring members and non-ring members with only hydrogen atoms, hydrocarbon or substituted hydrocarbon radicals, directly attached to ring carbon atoms
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D403/00—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00
- C07D403/02—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00 containing two hetero rings
- C07D403/04—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00 containing two hetero rings directly linked by a ring-member-to-ring-member bond
-
- C—CHEMISTRY; METALLURGY
- C40—COMBINATORIAL TECHNOLOGY
- C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
- C40B40/00—Libraries per se, e.g. arrays, mixtures
- C40B40/04—Libraries containing only organic compounds
-
- C—CHEMISTRY; METALLURGY
- C40—COMBINATORIAL TECHNOLOGY
- C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
- C40B50/00—Methods of creating libraries, e.g. combinatorial synthesis
- C40B50/14—Solid phase synthesis, i.e. wherein one or more library building blocks are bound to a solid support during library creation; Particular methods of cleavage from the solid support
Definitions
- reaction sequence on solid phase suitable for the generation of molecular diversity on small heterocycles of the pyrazole and isoxazole type.
- suitable conditions on solid phase were worked out and a variety of reactive agents (building blocks) was utilized in an effort to grasp the system's breadth of applicability.
- the inventive reaction sequence can be applied, for example, to exploit by the combinatorial approaches of the split and mix concept.
- inventive method using the inventive method a new facile way for the synthesis of combinatorial compound libraries consisting of modified heterocyclic rings in high yields and purity is provided. These combinatorial compound libraries serve as valuable reservoirs for the screening for pharmaceutically active compounds.
- the current invention concerns a solid phase synthesis of a heterocyclic ring, characterized in that it comprises the following steps:
- a solid carrier having reactive surface groups is loaded directely or via a spacer group with a compound bearing an acetyl function
- step b) optional the reaction product of step b) is modified with an ⁇ -alkylation step, and d) the heterocyclic ring is closed using a compound comprising two nucleophiles, wherein at least one of said nucleophiles is NH 2 .
- step a) is of formula 1
- Z is a solid carrier
- R 1 is a substituted or unsubstituted conjugated system that has no acidic hydrogen atoms
- R 5 is hydrogen, C 1 -C 6 alkyl, C 1 -C 6 alkylaryl, C 1 -C 6 alkoxy-C 1 -C 6 alkyl, C 1 -C 6 alkoxycarbonyl- C 1 -C 6 alkyl; each of which may be substituted or unsubstituted; step b) is of formula 2
- R 1 and R 5 are defined as above;
- R 2 is substituted or unsubstituted C 1 -C 6 alkyl, or a substituted or unsubstituted aromatic or aliphatic ring;
- R 4 is C 1 -C 6 alkyl, preferred is methyl and ethyl; the optional step c) is of formula 3
- R 1 , R 2 and R 4 are defined as above;
- R 5 is hydrogen
- X is a halogen, preferred is I, Br or Cl;
- R 3 is C 1 -C 6 alkyl, C 1 -C 6 alkenyl, C 1 -C 6 alkylcarbonyl-C 1 -C 6 alkylene, arylcarbonyl-C 1 - C 6 alkylene, or a substituted or unsubstituted aromatic or aliphatic ring; and step d) is of formula 4
- Y is a nucleophilic center like NH, NC 1 -C 4 alkyl, Naryl and O; preferred are O, NH, NC 1 - C 4 alkyl, NC 1 -C 4 alkyl aryl, Naryl unsubstituted or substituted with up to four Br, Cl, I, F, C 1 - C 4 alkyl, NO 2 , SO 2 C 1 -C 4 alkyl, OC 1 -Calkyl, carboxy or carbonyl groups, suitable aryl groups are for example thienylene, thiantrenylene, furylene, phenoxanthiinylene, isobenzofuranylene, pyrazolylene, isothiazolylene, isoxazolylene, pyridinylene pyrazinylene, pyrimidylene, indolizinylene, indazolylene, isoquinolylene, quinolylene phthalazinylene, naphthyridinylene, quinoxalinylene,
- the solid carrier Z is a resin.
- Z is a particle that is insoluble in the reaction media and to which the ligand can be bound in sufficient amount by means of reactive groups at the surface of the this particle.
- the binding of ligand and tag is effected, e.g. by amino, carboxyl, hydroxyl or halogen groups. These reactive groups are usually already constituents of the solid carrier, but they can also be applied or modified subsequently.
- the solid carrier customarily employed in solid-phase synthesis can be used, for example those used in Merrifield peptide synthesis. They consist largely of a polystyrene molecule that is crosslinked by copolymerization with divinyl benzene. The molecules are additionally derivatised to attach the reactants in the solid-phase synthesis.
- R 1 is ethinylene, thienylene, thiantrenylene, furylene, phenoxanthiinylene, isobenzofuranylene, pyrazolylene, isothiazolylene, isoxazolylene, pyridinylene, pyrazinylene, pyrimidylene, indolizinylene, indazolylene, isoquinolylene, quinolylene, phthalazinylene, naphthyridinylene, quinoxalinylene, quinazolyl
- R 1 are benzene, , and
- a preferred R 2 is, for example ethinyl, thienyl, thiantrenyl, furyl, phenoxanthiinyl, isobenzo- furanyl, pyrazolyl, isothiazolyl, isoxazolyl, pyridinyl, pyrazinyl, pyrimidyl, indolizinyl, indazolyl, isoquinolyl, quinolyl, phthalazinyl, naphthyridinyl, quinoxalinyl, quinazolyl, cinnolinyl, phenyl and naphthyl; wherein these conjugated systems are unsubstituted or substituted by groups that have no acidic hydrogens.
- phenyl 4-CH 3 OC 6 H 4 , 4-ClC 6 H 3 (2CI), 4-CH 3 OOCC 6 H 4 , 4-NCC 6 H 4 , furyl, pyrrolyl, thienyl, pyridyl, methyl pyrridyl, pyrazinyl, C 6 H 5 COOCH 3 , C 6 F 5 , C 6 H 4 C(CH 3 ) 3 , C 6 H 4 OCF 3 , C 6 H 4 OCH 2 C 6 H 5 , C 6 H 4 O,(CH 2 ) 15 CH 3 , C 6 H 3 (CF 3 ) 2, C 6 H 4 O(CH 2 ) 3 CH 3 , C 6 H 4 CI, C 6 H 4 CN, naphthyl, C 6 H 4 N(CH 3 ) 2 , C 6 H 4 C 6 H 5 , C 6 H 4 OCH 3 , C 6 H 4 C 6 H 4 COOCH 3 , C 6 H 2 (OCH 3 ) 3
- a preferred R 3 is, for example, hydrogen, C 1 -C 6 alkyl, C 1 -C 4 alkoxy-C 1 -C 4 alkyl, C 1 -C 6 alkenyl, C 1 -C 4 alkoxy-aryl, C 1 -C 5 alkanoyloxy-C 1 -C 6 alkyl, C 1 -C 6 alkoxycarbonyl-C 1 -C 5 alkyl.
- the inventive solid phase synthesis can be used for the generation of combinatorial compound libraries, e.g., in a the split and mix concept (Furka et al., Abstr. 14th Int. Congr. Biochem., Prague (1988), 5, 47; Furka et al., Int. J. Peptide Protein Res. (1991), 37, 487).
- the solid support is loaded with the R 1 component bearing the acetyl function (see table 1). Its carbonyl group is activated by standard methods and anchored to the acid labile Rink amide linker on polystyrene (Rink, Tetrahedron Lett. (1987), 28, 3787). We observe quantitative transformations within 1 hour, unless ortho substituted bifunctional derivatives like o-acetophenone and acetylphthalanilidic acid are used, which undergo ring closure side reactions (Nishio et al., Heterocycl. Chem. (1995), 32, 883).
- Ring closure to form a heterocyclic scaffold is tested successfully with hydrazines 4a-d and hydroxylamine (5a) (see table 4). With the non-alkylated intermediate 2a a faster cyclization kinetics than with 3a is observed. N-mono-substituted reagents are expected to yield regioisomers with equal efficiency, unless the intermediates would bear large differences of steric and electronic properties at the R 1 and R 2 sites. During the validation process we isolate both regioisomers of model compound 4d.
- the NH2-linker group is acylated with 0.3 M-solution of acetyl carboxylic acid (3 eq) at RT (preactivation 40 min with 3.3 eq DICD and 3.3 eq HOBt) until the Kaiser test (Kaiser et al., Anal. Biochem. (1970), 34, 595) is negative. c) Claisen condensation
- a suitable method for the preparation of a combinatorial compound library comprises, for example, the reaction steps as described above, wherein optionally before a reaction step is carried out,
- reaction step is carried out in each portion using a different chemical compound or reaction
- Alos embraced by the scope of the current invention is the combinatorial compound library obtainable by the method described above.
- a solid carrier having reactive surface groups is loaded with a compound bearing an acetyl function; or the resin is divided first into several portions then loaded with a different compound bearing an acetyl function in each portion and mixed again. Afterwards, e.g. , the pool containing the modified resin is divided into several separate portions again. The Claisen condensation is carried out in each portion using a different reagent to get different compounds.
- HPLC analytical separation is achieved using a reverse phase nucleosil C18 5 ⁇ 250 mm ⁇ 4.6 mm column, 215 nm, 10-90% CH 3 CN / 0.1% TFA over 30 mm, 1 ml/min.
- a part of the eluate (split 1 :25) is introduced into a Quattro-BQ mass spectrometer (VG Biotech, Altnncham, England), operating at a source temperature of 60°C and a cone voltage of 50 V, via an electrospray interface (EI).
- EI electrospray interface
- the modified resin of example 1 are suspended in a solution of 675 ⁇ mol carboxylic ester in 670 ⁇ l DMA (see table 5). Under inert gas 18 mg (450 ⁇ mol) of sodium hydride (60%) is added and the reaction mixture is well shaken for 1h at 90 °C. The resin is filtered, ished (30% v/v acetic acid / H 2 O, DMA, DMSO, and i-propanole), and dried under reduced pressure.
- This modified resin is heated with 500 ⁇ l of a 2.5 M solution of a nucleophile (HCl is neutralized by N(CH 3 CH 2 ) 3 ) in DMA for 20-24 h (see table 6) to give the desired heterocyclic products (see table 6).
- Example 6 Ring closure with compound that has a weak tendency to cyclize
- the NH 2 -linker group of 1.50 g 4-(2',4'-Dimethoxyphenyl-fmoc-aminomethyl)phenoxy resin (Rink amide resin) is acylated with a 0.3 M-solution of a compound of formula 10 (3 eq) at RT (after preactivation for 40 mm with 3.3 eq DICD and 3.3 eq HOBt) until the Kaiser test (Kaiser, E. et al. Anal. Biochem 1970, 34, 595) is negative to form a compound of formula 11.
- a portion of the product is cleaved from the resin as defined above and analyzed
- a portion of the product is cleaved from the resin as defined above and analyzed.
- the product is cleaved from the resin with 20% v/v TFA/CH 2 Cl 2 as defined above.
- HPLC preparative separation is achieved using a reverse phase nucleosil C18 5 ⁇ 20 mm ⁇
- acetyl carboxylic acids R a 1 to R a 4 are coupled to the resin in separate vessels.
- the four portions are mixed and distributed in 35 vessels, where each portion reacted with a distinct R c reagent, a carboxylic acid ester.
- the result is a randomized R a and a fixed R c position.
- the beads are mixed again and divided into 42 equal portions, of which 41 are reacted with monosubstituted hydrazines R e .
- the remaining last portion of the beads is reacted with hydroxylamme to an isoxazole library comprising 280 compounds.
- the reagents are used are defined below.
- Cyclization 1.6 g (640 ⁇ mol) are separated in 42 reaction vessels and each resin is treated with 790 ⁇ l of a 0.5 M solution of the appropriate monosubstituted hydrazine in DMA (agent for R e ). After heating the reaction mixtures for 3 days at 90°C each portion is washed separately with DMA, DMSO , and i-PrOH.
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Abstract
Priority Applications (1)
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AU75642/96A AU7564296A (en) | 1995-11-17 | 1996-11-05 | Solid phase synthesis of heterocyclic compounds and combinatorial compound library |
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EP95810717 | 1995-11-17 | ||
EP95810717.9 | 1995-11-17 |
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WO1997019039A1 true WO1997019039A1 (fr) | 1997-05-29 |
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PCT/EP1996/004808 WO1997019039A1 (fr) | 1995-11-17 | 1996-11-05 | Synthese en phase solide de composes heterocycliques et d'une banque combinatoire de composes |
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Cited By (20)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO1999037630A1 (fr) * | 1998-01-23 | 1999-07-29 | Versicor, Inc. | Banques combinatoires d'oxazolidinones, compositions a base de tels composes et procedes de preparation |
WO2000046206A1 (fr) * | 1999-02-04 | 2000-08-10 | Bayer Aktiengesellschaft | Derives de pyrazolbenzylamine substitues utilises pour combattre les anemies |
WO2000046208A1 (fr) * | 1999-02-04 | 2000-08-10 | Bayer Aktiengesellschaft | Acides pyrazolcarboxyliques substitues utilises pour combattre les anemies |
WO2000045894A3 (fr) * | 1999-02-04 | 2001-04-19 | Bayer Ag | Utilisation d'amides d'acides pyrazol-carboxyliques |
WO2001049681A1 (fr) * | 1999-12-30 | 2001-07-12 | H. Lundbeck A/S | Procede de preparation de derives de benzene substitue |
WO2000045799A3 (fr) * | 1999-02-04 | 2002-01-24 | Bayer Ag | Utilisation d'acides isoxazolcarboxyliques substitues et de leurs derives, et nouvelles substances |
US6562844B2 (en) | 1998-01-23 | 2003-05-13 | Pharmacia & Upjohn Company | Oxazolidinone combinatorial libraries, compositions and methods of preparation |
US7002020B1 (en) | 1998-01-23 | 2006-02-21 | Pharmacia & Upjohn Company | Oxazolidinone combinatorial libraries, compositions and methods of preparation |
WO2006021277A1 (fr) | 2004-08-21 | 2006-03-02 | Merck Patent Gmbh | Monomeres, oliogomeres et polymeres de thieno[2,3-b]thiophene |
KR100790916B1 (ko) | 1999-12-30 | 2008-01-03 | 하. 룬트벡 아크티에 셀스카브 | 치환 페닐-피페라진 유도체, 그들의 제조 및 사용 |
CN101062916B (zh) * | 2006-04-29 | 2012-12-26 | 中国人民解放军军事医学科学院毒物药物研究所 | 三取代1h-吡唑化合物、其制备方法、药物组合物及其制药用途 |
US8932992B2 (en) | 2001-06-20 | 2015-01-13 | Nuevolution A/S | Templated molecules and methods for using such molecules |
US9096951B2 (en) | 2003-02-21 | 2015-08-04 | Nuevolution A/S | Method for producing second-generation library |
US9109248B2 (en) | 2002-10-30 | 2015-08-18 | Nuevolution A/S | Method for the synthesis of a bifunctional complex |
US9121110B2 (en) | 2002-12-19 | 2015-09-01 | Nuevolution A/S | Quasirandom structure and function guided synthesis methods |
US9574189B2 (en) | 2005-12-01 | 2017-02-21 | Nuevolution A/S | Enzymatic encoding methods for efficient synthesis of large libraries |
US10730906B2 (en) | 2002-08-01 | 2020-08-04 | Nuevolutions A/S | Multi-step synthesis of templated molecules |
US10731151B2 (en) | 2002-03-15 | 2020-08-04 | Nuevolution A/S | Method for synthesising templated molecules |
US11118215B2 (en) | 2003-09-18 | 2021-09-14 | Nuevolution A/S | Method for obtaining structural information concerning an encoded molecule and method for selecting compounds |
US11225655B2 (en) | 2010-04-16 | 2022-01-18 | Nuevolution A/S | Bi-functional complexes and methods for making and using such complexes |
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US6531470B1 (en) | 1998-01-23 | 2003-03-11 | Pharmacia & Upjohn Company | Oxazolidinone combinatorial libraries, compositions and methods of preparation |
WO1999037630A1 (fr) * | 1998-01-23 | 1999-07-29 | Versicor, Inc. | Banques combinatoires d'oxazolidinones, compositions a base de tels composes et procedes de preparation |
US7002020B1 (en) | 1998-01-23 | 2006-02-21 | Pharmacia & Upjohn Company | Oxazolidinone combinatorial libraries, compositions and methods of preparation |
US6562844B2 (en) | 1998-01-23 | 2003-05-13 | Pharmacia & Upjohn Company | Oxazolidinone combinatorial libraries, compositions and methods of preparation |
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WO2000045894A3 (fr) * | 1999-02-04 | 2001-04-19 | Bayer Ag | Utilisation d'amides d'acides pyrazol-carboxyliques |
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