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WO1997010242A1 - Three new cytotoxic macrolides from a marine sponge - Google Patents

Three new cytotoxic macrolides from a marine sponge Download PDF

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Publication number
WO1997010242A1
WO1997010242A1 PCT/GB1996/002240 GB9602240W WO9710242A1 WO 1997010242 A1 WO1997010242 A1 WO 1997010242A1 GB 9602240 W GB9602240 W GB 9602240W WO 9710242 A1 WO9710242 A1 WO 9710242A1
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Prior art keywords
compounds
compound
latrunculin
zampanolide
sponge
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Application number
PCT/GB1996/002240
Other languages
French (fr)
Inventor
Tatsuo Higa
Jun-Ichi Tanaka
Dolores Garcia Gravalos
Original Assignee
Pharma Mar, S.A.
Ruffles, Graham, Keith
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Publication date
Application filed by Pharma Mar, S.A., Ruffles, Graham, Keith filed Critical Pharma Mar, S.A.
Priority to AU69365/96A priority Critical patent/AU6936596A/en
Publication of WO1997010242A1 publication Critical patent/WO1997010242A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D417/00Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group C07D415/00
    • C07D417/02Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group C07D415/00 containing two hetero rings
    • C07D417/06Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group C07D415/00 containing two hetero rings linked by a carbon chain containing only aliphatic carbon atoms
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D493/00Heterocyclic compounds containing oxygen atoms as the only ring hetero atoms in the condensed system
    • C07D493/02Heterocyclic compounds containing oxygen atoms as the only ring hetero atoms in the condensed system in which the condensed system contains two hetero rings
    • C07D493/08Bridged systems

Definitions

  • the present invention relates to new macrolides from marine sponge. Such compounds have antitumor activity.
  • Latrunculins have since then been isolated from other sponge species and nudibranchs. Most notably, latrunculin A and the laulimalides (or fijianolides, compounds 3 and 4), another class of macrolides, have been reported to co-occur in three specimens of Pacific sponges described as Hyatella sp., see J. Org. Chem.. 1988, 53. 3644, Spongia mycofijiensis, see J. Org. Chem.. 1988, 53, 3642, and unidentified species, see J. Nat. Prod., 1992. 55, 506.
  • the present invention provides compounds designated latrunculin S, neolaulimalide and zampanolide, also referred to as compounds (5), (6) and (7).
  • the structures of these three compounds are as follows:
  • the compounds show antitumor activity.
  • the invention also provides antitumor compositions and methods using at least one of the compounds of this invention.
  • a method of isolating the compounds is also provided, by extraction from the sponge Fasciospongia rimosa.
  • compositions provided by this invention include solid (tablets, pills, capsules, granules, etc.) or liquid (solutions, suspensions or emulsions) formulations with a suitable composition for oral, topical or parenteral administration. They may contain the pure compound or in combination with any other pharmacologically active compound. These compositions may need to be sterile when administered parentally.
  • the correct dosage of pharmaceutical composition comprising a compound of the invention will vary according to the pharmaceutical formulation, the mode of application, and the particular situs, host and tumor being treated. Other factors like age, body weight, sex diet, time of administration, rate of excretion, condition of the host, drug combinations, reaction sensitivities and severity of the disease shall be taken into account. Administration can be carried out continuously or periodically within the maximum tolerated dose.
  • Compounds of the invention can be made by isolation from marine sources, notably by a process of this invention which comprises extraction from Fasciospongia rimosa, or by synthetic or semi-synthetic procedures.
  • the present invention is illustrated by the following Examples, which include details of the isolation of the compounds from marine sponge Fasciospongia rimosa collected in Okinawa and for which a voucher specimen (G301467) was deposited at Queensland Museum. Australia, and details of the biological activity of the compounds. A second voucher specimen (QMG312707) has been deposited at the same Museum. Taxonomically. the correct generic and family assignments of the sponge are a problem, which possibly is more correctly identified as
  • rimosa (Lamarck) (order dictyoceratida: family ?Spongiidae).
  • Spongia mycofijiensis Bakus e.g. Quinoa. Kakou & Crews (1998), J. Org.
  • the sponge Fasciospongia Rimosa was collected from underwater caves on Shimoji-jima. an island located in the southwest of Okinawa. A sample (wet. 4.48 kg) was extracted by steeping in acetone, and the residue after concentration was reextracted with EtOAc to give 39 g of an oil. The oil showed potent cytotoxicity (IC 50 0.002-0.1 ⁇ g/ml) against P388. A549, and HT29 cell lines. Separation of the extract as shown in Scheme 1 gave latrunculin A (compound 1. 17.2% of the extract), laulimalide (compound 3. 4.2%), isolaulimalide (compound 4. 0.31%). and two new minor constituents designated as latrunculin S (compound 5. 0.012%) and neolaulimalide
  • Table 1 shows the molecular formulae and some physical properties for the new compounds 5. 6 and 7. Comparison of the 1 H and 13 C NMR spectra ( Figure 2) with those of latrunculin A (compound 1 ) and 2D NMR analysis suggested the structure of latrunculin S to be depicted as shown for compound 5. Structural correlation of compound 5 with compound 1 was secured by NaBH 4 reduction of compound 1 which yielded two diastereomeric products compound 5 and compound 8 (Scheme 2). One of them was identical with latrunculin S (compound 5). The absolute configuration at C17 or 5 was R, as determined by modified Mosher's method.
  • Neolaulimalide (6) had the same molecular formula C 30 H 42 O 7 with those of laulimalide (3) and isolaulimalide (4), suggesting a related isomeric structure.
  • the structure (6) was determined by 2D NMR analysis including
  • zampanolide (7) was found to be C 29 H 37 NO 6 by HRFABMS.
  • the structure was elucidated by analysis of 2D NMR spectra (BCOSY, TOCSY, HMQC, HMBC and PSNOESY, Figures 5-6) as a new 20-membered macrolide having an amide of a 2.4-hexadienoic acid on the side chain.
  • P-388 were seeded into 16 mm wells at 1 ⁇ 10 4 cells per well in 1 ml aliquots of MEM 5FCS containing the indicated concentration of drug. A separate set of cultures without drug were seeded as control growth to ensure that these cells remained in exponential phase of growth. All determinations were carried out in duplicate. After three days of incubation at 37°C, 10% CO 2 in an atmosphere of 98% humidity, the wells were stained with 0.1% Crystal Violet. An approximate IC 50 was determined by comparing the growth in wells with drug to the growth in wells control.
  • HT-29 and MEL-28 cells were seeded into 16 mm wells at 2 ⁇ 10 4 cells per well in 1 ml aliquots of MEM 10FCS containing the indicated concentration of drug.
  • a separate set of cultures without drug was seeded as control growth to ensure that cells remained in exponential phase of growth. All determinations were carried out in duplicate. After three days of incubation at 37°C. 10% CO 2 in an atmosphere of 98% humidity, the wells were stained with 0.1% Crystal Violet. An approximate IC 50 was determined by comparing the growth in wells with drug to the growth in wells control. Results:

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  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)

Abstract

Novel antitumor compounds latrunculin S, neolaulimalide and zampanolide, also respectively referred to as compounds (5, 6, and 7), of formulae (5, 6 and 7), can be isolated from the sponge DOLLAR (i(Fasciospongia rimosa).

Description

Three New Cytotoxic Macrolides from a Marine Sponge
The present invention relates to new macrolides from marine sponge. Such compounds have antitumor activity.
BACKGROUND OF THE INVENTION
Ichthyotoxic sponge metabolites designated the latrunculins were first reported by Kashman et al., see Tetrahedron Lett., 1980, 21 , 3629; and J. Org. Chem., 1983. 49, 3512, as novel marine macrolides having significant biological activity. Apart from potent toxicity against fish, latrunculin A (compound 1 ) and latrunculin B (compound 2) have been shown to effect strong reversible alteration of the microfilament organisation in cultured cells, see Science 1983, 219, 493.
Figure imgf000003_0001
Latrunculins have since then been isolated from other sponge species and nudibranchs. Most notably, latrunculin A and the laulimalides (or fijianolides, compounds 3 and 4), another class of macrolides, have been reported to co-occur in three specimens of Pacific sponges described as Hyatella sp., see J. Org. Chem.. 1988, 53. 3644, Spongia mycofijiensis, see J. Org. Chem.. 1988, 53, 3642, and unidentified species, see J. Nat. Prod., 1992. 55, 506.
Figure imgf000004_0001
SUMMARY OF THE PRESENT INVENTION
The present invention provides compounds designated latrunculin S, neolaulimalide and zampanolide, also referred to as compounds (5), (6) and (7). The structures of these three compounds are as follows:
Figure imgf000005_0001
The compounds show antitumor activity. Thus, the invention also provides antitumor compositions and methods using at least one of the compounds of this invention.
A method of isolating the compounds is also provided, by extraction from the sponge Fasciospongia rimosa.
EMBODIMENTS OF THE INVENTION
Examples of pharmaceutical compositions provided by this invention include solid (tablets, pills, capsules, granules, etc.) or liquid (solutions, suspensions or emulsions) formulations with a suitable composition for oral, topical or parenteral administration. They may contain the pure compound or in combination with any other pharmacologically active compound. These compositions may need to be sterile when administered parentally.
The correct dosage of pharmaceutical composition comprising a compound of the invention will vary according to the pharmaceutical formulation, the mode of application, and the particular situs, host and tumor being treated. Other factors like age, body weight, sex diet, time of administration, rate of excretion, condition of the host, drug combinations, reaction sensitivities and severity of the disease shall be taken into account. Administration can be carried out continuously or periodically within the maximum tolerated dose.
Compounds of the invention can be made by isolation from marine sources, notably by a process of this invention which comprises extraction from Fasciospongia rimosa, or by synthetic or semi-synthetic procedures.
EXAMPLES OF THE INVENTION
The present invention is illustrated by the following Examples, which include details of the isolation of the compounds from marine sponge Fasciospongia rimosa collected in Okinawa and for which a voucher specimen (G301467) was deposited at Queensland Museum. Australia, and details of the biological activity of the compounds. A second voucher specimen (QMG312707) has been deposited at the same Museum. Taxonomically. the correct generic and family assignments of the sponge are a problem, which possibly is more correctly identified as
'Ηyattella " rimosa (Lamarck) (order dictyoceratida: family ?Spongiidae).
P Bergquist noted in the reprint by Gulavita. Gunasekera and Pomponi (1992)
(J Nat. Prod. 55(4): 508), this "species" strictly belongs to the family
Thorectidae because it has lamellated fibres. It has previously been called
Spongia mycofijiensis Bakus (e.g. Quinoa. Kakou & Crews (1998), J. Org.
Chem. 53:3644), a "new genus" of Thorectidae (Gulavita, Gunasekera and
Pomponi (1992) J. Nat. Prod. 55($):508). and Fasciospongia rimosa
(Lamarck) in the present work..
Isolation
The sponge Fasciospongia Rimosa was collected from underwater caves on Shimoji-jima. an island located in the southwest of Okinawa. A sample (wet. 4.48 kg) was extracted by steeping in acetone, and the residue after concentration was reextracted with EtOAc to give 39 g of an oil. The oil showed potent cytotoxicity (IC50 0.002-0.1 μg/ml) against P388. A549, and HT29 cell lines. Separation of the extract as shown in Scheme 1 gave latrunculin A (compound 1. 17.2% of the extract), laulimalide (compound 3. 4.2%), isolaulimalide (compound 4. 0.31%). and two new minor constituents designated as latrunculin S (compound 5. 0.012%) and neolaulimalide
(compound 6. 0.012%). We originally named laru nculin S as latrunculin E. but a compound named latrunculin E already exists in the literature. A second collection (480 g) of the sponge from the island of Okinawa was similarly treated to furnish latrunculin A (compound 1 , 35% of EtOAc extract) and a new macrolide named zampanolide (compound 7. 0.13%). We originally named zampanolide as fasciolide. but prefer zampanolide to reflect the name of collection site of the sponge.
Structures
Table 1 shows the molecular formulae and some physical properties for the new compounds 5. 6 and 7. Comparison of the 1H and 13C NMR spectra (Figure 2) with those of latrunculin A (compound 1 ) and 2D NMR analysis suggested the structure of latrunculin S to be depicted as shown for compound 5. Structural correlation of compound 5 with compound 1 was secured by NaBH4 reduction of compound 1 which yielded two diastereomeric products compound 5 and compound 8 (Scheme 2). One of them was identical with latrunculin S (compound 5). The absolute configuration at C17 or 5 was R, as determined by modified Mosher's method.
Table 1. Molecular Formula and Physical Data for Compounds 5-7
Figure imgf000008_0001
Neolaulimalide (6) had the same molecular formula C30H42O7 with those of laulimalide (3) and isolaulimalide (4), suggesting a related isomeric structure. The structure (6) was determined by 2D NMR analysis including
COSY, TOCSY, HMQC and HMBC. The assignment of NMR data is shown in Figure 3. The structure and absolute stereochemistry of compound 6 were confirmed by conversion to isolaulimalide (4). Treatment 6 with CSA gave 4 as a major product. Progress of the conversion reaction could be monitored by NMR as shown in Figure 4. Although the conversion of laulimalide (3) to isolaulimalide (4) in the same treatment was complete in 2 hr. the conversion of 6 took more than 48 hr to complete (Scheme 3).
The molecular formula of zampanolide (7) was found to be C29H37NO6 by HRFABMS. The structure was elucidated by analysis of 2D NMR spectra (BCOSY, TOCSY, HMQC, HMBC and PSNOESY, Figures 5-6) as a new 20-membered macrolide having an amide of a 2.4-hexadienoic acid on the side chain.
Further physical data for these compounds is given in Chemistry Letters 1996 pp 255,256 and Tetrahedron Letters Vol. 37 No. 31 , pp 5535-5538, 1996 Biological Activity.
Cells were maintained in logarithmic phase of growth in Eagle's Minimum Essential Medium, with Earle's Balanced Salts, with 2.0 mM L-glutamine. with non-essential amino acids, without sodium bicarbonate (EMEM/neaa); supplemented with 10% Fetal Calf Serum (FCS), 10-2 M sodium bicarbonate and 0.1 g/l penicillin-G + streptomycin sulphate. A simple screening procedure was carried out to determine and compare the antitumor activity of these compounds, using an adapted form of a literature method. The antitumor cells employed were P-388 (suspension culture of a lymphoid neoplasm from DBA/2 mouse). A-549 (monolaver culture of a human lung carcinoma), HT-29 (monolaver culture of a human colon carcinoma) and MEL-28 (monolayer culture of a human melanoma).
P-388 were seeded into 16 mm wells at 1 × 104 cells per well in 1 ml aliquots of MEM 5FCS containing the indicated concentration of drug. A separate set of cultures without drug were seeded as control growth to ensure that these cells remained in exponential phase of growth. All determinations were carried out in duplicate. After three days of incubation at 37°C, 10% CO2 in an atmosphere of 98% humidity, the wells were stained with 0.1% Crystal Violet. An approximate IC50 was determined by comparing the growth in wells with drug to the growth in wells control.
A-549, HT-29 and MEL-28 cells were seeded into 16 mm wells at 2 × 104 cells per well in 1 ml aliquots of MEM 10FCS containing the indicated concentration of drug. A separate set of cultures without drug was seeded as control growth to ensure that cells remained in exponential phase of growth. All determinations were carried out in duplicate. After three days of incubation at 37°C. 10% CO2 in an atmosphere of 98% humidity, the wells were stained with 0.1% Crystal Violet. An approximate IC50 was determined by comparing the growth in wells with drug to the growth in wells control. Results:
Figure imgf000011_0001
Literature References
Biochem. Bioph. Res. Comm. 1984, 3. 848-854.
J. Med. Chem 1981 , 24, 1078-1083.

Claims

1. A compound selected from the group consisting of latrunculin S, neolaulimalide and zampanolide. also respectively referred to as compounds (5), (6) and (7). of the following formulae:
Figure imgf000012_0001
2. A pharmaceutical composition containing a compound selected from the group consisting of latrunculin S, neolaulimalide and zampanolide. also respectively referred to as compounds (5), (6) and (7). of the following formulae:
Figure imgf000013_0001
together with a pharmaceutically acceptable carrier.
3. A method for treatment of a tumor which comprises administering an effective amount of a compound selected from the group consisting of latrunculin S, neolaulimalide and zampanolide. also respectively referred to as compounds (5), (6) and (7), of the following formulae:
Figure imgf000014_0001
4. A process for preparing a compound selected from the group consisting of latrunculin S, neolaulimalide and zampanolide, also respectively referred to as compounds (5), (6) and (7), of the following formulae:
Figure imgf000014_0002
Figure imgf000015_0001
which process comprises isolating the compound from the sponge Fasciospongia rimosa.
PCT/GB1996/002240 1995-09-11 1996-09-11 Three new cytotoxic macrolides from a marine sponge WO1997010242A1 (en)

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GB9518536.9 1995-09-11

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Cited By (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2001054689A1 (en) * 2000-01-28 2001-08-02 University Of Hawaii Laulimalide compounds as microtubule stabilizing agents
WO2001021765A3 (en) * 1999-09-21 2001-10-11 Univ Roma METHOD FOR THE SELECTIVE PROTECTION OF PROLIFERATING NORMAL CELLS AND THE SELECTIVE ERADICATION OF TUMOR CELLS HAVING AN INACTIVE p53 PATHWAY
WO2002064589A1 (en) * 2001-02-09 2002-08-22 Kosan Biosciences, Inc. Laulimalide derivatives
WO2005030779A3 (en) * 2003-09-23 2008-01-24 Eisai Co Ltd Laulimalide analogs with anti-cancer activitity
WO2007079312A3 (en) * 2005-12-02 2008-02-21 Univ Colorado Compositions and methods for treating actin-mediated medical conditions

Non-Patent Citations (5)

* Cited by examiner, † Cited by third party
Title
AMIRAM GROWEISS ET AL: "Marine toxins of ...", J. ORG. CHEM., vol. 48, no. 20, 1983, pages 3512 - 3516, XP002020711 *
CHEM. LETT., vol. 4, pages 255 - 256 *
CHEMICAL ABSTRACTS, vol. 124, no. 23, 3 June 1996, Columbus, Ohio, US; abstract no. 312574n, TANAKA, JUNG-ICHI ET AL: "New cytotoxic macrolides from the sponge Fasciospongia rimosa" XP002020713 *
D.G. CORLEY ET AL: "Laulimalides: new potent cytotoxic macrolides ...", J. ORG. CHEM., vol. 53, no. 15, 1988, pages 3644 - 3646, XP002020710 *
E. QUINOA ET AL: "Fijianolides, polyketide heterocycles from a marine sponge", J. ORG. CHEM., vol. 53, no. 15, 1988, pages 3642 - 3644, XP002020712 *

Cited By (8)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2001021765A3 (en) * 1999-09-21 2001-10-11 Univ Roma METHOD FOR THE SELECTIVE PROTECTION OF PROLIFERATING NORMAL CELLS AND THE SELECTIVE ERADICATION OF TUMOR CELLS HAVING AN INACTIVE p53 PATHWAY
WO2001054689A1 (en) * 2000-01-28 2001-08-02 University Of Hawaii Laulimalide compounds as microtubule stabilizing agents
US7435754B2 (en) 2000-01-28 2008-10-14 Utah State University Laulimalide microtubule stabilizing agents
WO2002064589A1 (en) * 2001-02-09 2002-08-22 Kosan Biosciences, Inc. Laulimalide derivatives
US6670389B2 (en) 2001-02-09 2003-12-30 Kosan Biosciences, Inc. Laulimalide derivatives
US6815463B2 (en) 2001-02-09 2004-11-09 Kosan Biosciences, Inc. Laulimalide derivatives
WO2005030779A3 (en) * 2003-09-23 2008-01-24 Eisai Co Ltd Laulimalide analogs with anti-cancer activitity
WO2007079312A3 (en) * 2005-12-02 2008-02-21 Univ Colorado Compositions and methods for treating actin-mediated medical conditions

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GB9518536D0 (en) 1995-11-08

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