WO1996010034A2 - Inhibiteurs de la transferase de proteines farnesylees exempts de thiol - Google Patents
Inhibiteurs de la transferase de proteines farnesylees exempts de thiol Download PDFInfo
- Publication number
- WO1996010034A2 WO1996010034A2 PCT/US1995/012224 US9512224W WO9610034A2 WO 1996010034 A2 WO1996010034 A2 WO 1996010034A2 US 9512224 W US9512224 W US 9512224W WO 9610034 A2 WO9610034 A2 WO 9610034A2
- Authority
- WO
- WIPO (PCT)
- Prior art keywords
- substituted
- alkyl
- unsubstituted
- aryl
- hydrogen
- Prior art date
Links
- 102000004357 Transferases Human genes 0.000 title claims description 38
- 108090000992 Transferases Proteins 0.000 title claims description 38
- 239000003112 inhibitor Substances 0.000 title abstract description 18
- 238000000034 method Methods 0.000 claims abstract description 75
- 239000000203 mixture Substances 0.000 claims abstract description 75
- 102000007317 Farnesyltranstransferase Human genes 0.000 claims abstract 3
- 108010007508 Farnesyltranstransferase Proteins 0.000 claims abstract 3
- 125000000623 heterocyclic group Chemical group 0.000 claims description 316
- 125000003118 aryl group Chemical group 0.000 claims description 280
- 229910052739 hydrogen Inorganic materials 0.000 claims description 271
- 239000001257 hydrogen Substances 0.000 claims description 265
- 125000004169 (C1-C6) alkyl group Chemical group 0.000 claims description 227
- 125000000753 cycloalkyl group Chemical group 0.000 claims description 187
- 150000001875 compounds Chemical class 0.000 claims description 176
- UFHFLCQGNIYNRP-UHFFFAOYSA-N Hydrogen Chemical compound [H][H] UFHFLCQGNIYNRP-UHFFFAOYSA-N 0.000 claims description 109
- 229940024606 amino acid Drugs 0.000 claims description 94
- 235000001014 amino acid Nutrition 0.000 claims description 94
- 150000001413 amino acids Chemical class 0.000 claims description 92
- 125000004435 hydrogen atom Chemical group [H]* 0.000 claims description 81
- 150000002431 hydrogen Chemical class 0.000 claims description 75
- 125000003837 (C1-C20) alkyl group Chemical group 0.000 claims description 70
- 125000005010 perfluoroalkyl group Chemical group 0.000 claims description 65
- 125000003342 alkenyl group Chemical group 0.000 claims description 58
- 125000001424 substituent group Chemical group 0.000 claims description 46
- 102000016914 ras Proteins Human genes 0.000 claims description 42
- 108010014186 ras Proteins Proteins 0.000 claims description 42
- 150000003839 salts Chemical class 0.000 claims description 42
- 125000006376 (C3-C10) cycloalkyl group Chemical group 0.000 claims description 40
- 125000000304 alkynyl group Chemical group 0.000 claims description 40
- 125000003358 C2-C20 alkenyl group Chemical group 0.000 claims description 36
- -1 N(R10)2 Inorganic materials 0.000 claims description 34
- UCUNFLYVYCGDHP-BYPYZUCNSA-N L-methionine sulfone Chemical compound CS(=O)(=O)CC[C@H](N)C(O)=O UCUNFLYVYCGDHP-BYPYZUCNSA-N 0.000 claims description 34
- 125000003107 substituted aryl group Chemical group 0.000 claims description 34
- 125000004637 2-oxopiperidinyl group Chemical group O=C1N(CCCC1)* 0.000 claims description 33
- QEFRNWWLZKMPFJ-ZXPFJRLXSA-N L-methionine (R)-S-oxide Chemical compound C[S@@](=O)CC[C@H]([NH3+])C([O-])=O QEFRNWWLZKMPFJ-ZXPFJRLXSA-N 0.000 claims description 33
- QEFRNWWLZKMPFJ-UHFFFAOYSA-N L-methionine sulphoxide Natural products CS(=O)CCC(N)C(O)=O QEFRNWWLZKMPFJ-UHFFFAOYSA-N 0.000 claims description 33
- 125000002883 imidazolyl group Chemical group 0.000 claims description 33
- 125000001041 indolyl group Chemical group 0.000 claims description 33
- 125000002183 isoquinolinyl group Chemical group C1(=NC=CC2=CC=CC=C12)* 0.000 claims description 33
- 125000005494 pyridonyl group Chemical group 0.000 claims description 33
- 125000004076 pyridyl group Chemical group 0.000 claims description 33
- 125000000719 pyrrolidinyl group Chemical group 0.000 claims description 33
- 125000002943 quinolinyl group Chemical group N1=C(C=CC2=CC=CC=C12)* 0.000 claims description 33
- 125000005346 substituted cycloalkyl group Chemical group 0.000 claims description 33
- 125000000335 thiazolyl group Chemical group 0.000 claims description 33
- 150000004702 methyl esters Chemical class 0.000 claims description 32
- 125000001544 thienyl group Chemical group 0.000 claims description 27
- 229910052757 nitrogen Inorganic materials 0.000 claims description 26
- 125000004432 carbon atom Chemical group C* 0.000 claims description 24
- 229910052760 oxygen Inorganic materials 0.000 claims description 22
- 229910052717 sulfur Inorganic materials 0.000 claims description 21
- 125000000008 (C1-C10) alkyl group Chemical group 0.000 claims description 20
- 125000006374 C2-C10 alkenyl group Chemical group 0.000 claims description 20
- 125000005842 heteroatom Chemical group 0.000 claims description 20
- RUZLIIJDZBWWSA-INIZCTEOSA-N methyl 2-[[(1s)-1-(7-methyl-2-morpholin-4-yl-4-oxopyrido[1,2-a]pyrimidin-9-yl)ethyl]amino]benzoate Chemical group COC(=O)C1=CC=CC=C1N[C@@H](C)C1=CC(C)=CN2C(=O)C=C(N3CCOCC3)N=C12 RUZLIIJDZBWWSA-INIZCTEOSA-N 0.000 claims description 20
- 125000000882 C2-C6 alkenyl group Chemical group 0.000 claims description 16
- 125000003601 C2-C6 alkynyl group Chemical group 0.000 claims description 16
- 125000002915 carbonyl group Chemical group [*:2]C([*:1])=O 0.000 claims description 16
- 125000000472 sulfonyl group Chemical group *S(*)(=O)=O 0.000 claims description 16
- 241000124008 Mammalia Species 0.000 claims description 14
- 125000000217 alkyl group Chemical group 0.000 claims description 14
- 206010028980 Neoplasm Diseases 0.000 claims description 12
- MLBHNPAXTLCWTO-SDZVROEXSA-N (2s)-2-[[2-[[(2s,3s)-2-[[2-[3-[(4-cyanophenyl)methyl]imidazol-4-yl]acetyl]amino]-3-methylpentyl]-(naphthalen-1-ylmethyl)amino]acetyl]amino]-4-methylsulfanylbutanoic acid Chemical compound N([C@H](CN(CC(=O)N[C@@H](CCSC)C(O)=O)CC=1C2=CC=CC=C2C=CC=1)[C@@H](C)CC)C(=O)CC1=CN=CN1CC1=CC=C(C#N)C=C1 MLBHNPAXTLCWTO-SDZVROEXSA-N 0.000 claims description 11
- QNAYBMKLOCPYGJ-REOHCLBHSA-N L-alanine Chemical compound C[C@H](N)C(O)=O QNAYBMKLOCPYGJ-REOHCLBHSA-N 0.000 claims description 11
- 235000004279 alanine Nutrition 0.000 claims description 11
- 125000001797 benzyl group Chemical group [H]C1=C([H])C([H])=C(C([H])=C1[H])C([H])([H])* 0.000 claims description 9
- 201000011510 cancer Diseases 0.000 claims description 9
- 230000002401 inhibitory effect Effects 0.000 claims description 9
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 claims description 9
- OCUSNPIJIZCRSZ-ZTZWCFDHSA-N (2s)-2-amino-3-methylbutanoic acid;(2s)-2-amino-4-methylpentanoic acid;(2s,3s)-2-amino-3-methylpentanoic acid Chemical compound CC(C)[C@H](N)C(O)=O.CC[C@H](C)[C@H](N)C(O)=O.CC(C)C[C@H](N)C(O)=O OCUSNPIJIZCRSZ-ZTZWCFDHSA-N 0.000 claims description 8
- 125000003386 piperidinyl group Chemical group 0.000 claims description 8
- 125000006273 (C1-C3) alkyl group Chemical group 0.000 claims description 7
- 239000003937 drug carrier Substances 0.000 claims description 7
- 239000008194 pharmaceutical composition Substances 0.000 claims description 7
- BNHIGBMRWOTWFO-DZMJNENTSA-N (2s)-2-[[2-[[(2s,3s)-2-[[2-[3-[(4-cyanophenyl)methyl]imidazol-4-yl]acetyl]amino]-3-methylpentyl]-(naphthalen-1-ylmethyl)amino]acetyl]amino]-4-hydroxybutanoic acid Chemical compound N([C@H](CN(CC(=O)N[C@@H](CCO)C(O)=O)CC=1C2=CC=CC=C2C=CC=1)[C@@H](C)CC)C(=O)CC1=CN=CN1CC1=CC=C(C#N)C=C1 BNHIGBMRWOTWFO-DZMJNENTSA-N 0.000 claims description 5
- FFEARJCKVFRZRR-BYPYZUCNSA-N L-methionine Chemical compound CSCC[C@H](N)C(O)=O FFEARJCKVFRZRR-BYPYZUCNSA-N 0.000 claims description 5
- DWKPPFQULDPWHX-VKHMYHEASA-N l-alanyl ester Chemical compound COC(=O)[C@H](C)N DWKPPFQULDPWHX-VKHMYHEASA-N 0.000 claims description 5
- BTTAYOKAUFIVBM-SDZVROEXSA-N methyl (2s)-2-[[2-[[(2s,3s)-3-methyl-2-[[2-[3-[(4-nitrophenyl)methyl]imidazol-4-yl]acetyl]amino]pentyl]-(naphthalen-1-ylmethyl)amino]acetyl]amino]-4-methylsulfanylbutanoate Chemical compound N([C@H](CN(CC(=O)N[C@@H](CCSC)C(=O)OC)CC=1C2=CC=CC=C2C=CC=1)[C@@H](C)CC)C(=O)CC1=CN=CN1CC1=CC=C([N+]([O-])=O)C=C1 BTTAYOKAUFIVBM-SDZVROEXSA-N 0.000 claims description 5
- 229940002612 prodrug Drugs 0.000 claims description 5
- 239000000651 prodrug Substances 0.000 claims description 5
- CSYHHWUWTASEFH-TVLMAONJSA-N propan-2-yl (2s)-2-[[2-[[(2s,3s)-2-[[2-[3-[(4-cyanophenyl)methyl]imidazol-4-yl]acetyl]amino]-3-methylpentyl]-(naphthalen-1-ylmethyl)amino]acetyl]amino]-4-methylsulfanylbutanoate Chemical compound N([C@H](CN(CC(=O)N[C@@H](CCSC)C(=O)OC(C)C)CC=1C2=CC=CC=C2C=CC=1)[C@@H](C)CC)C(=O)CC1=CN=CN1CC1=CC=C(C#N)C=C1 CSYHHWUWTASEFH-TVLMAONJSA-N 0.000 claims description 5
- ZDXPYRJPNDTMRX-VKHMYHEASA-N L-glutamine Chemical compound OC(=O)[C@@H](N)CCC(N)=O ZDXPYRJPNDTMRX-VKHMYHEASA-N 0.000 claims description 4
- ZDXPYRJPNDTMRX-UHFFFAOYSA-N glutamine Natural products OC(=O)C(N)CCC(N)=O ZDXPYRJPNDTMRX-UHFFFAOYSA-N 0.000 claims description 4
- 229930182817 methionine Natural products 0.000 claims description 4
- CBSHMRMVRKNMPY-WWTZYHKLSA-N methyl (2s)-2-[[2-[[(2s,3s)-2-[[2-[3-[(4-cyanophenyl)methyl]imidazol-4-yl]acetyl]amino]-3-methylpentyl]-(naphthalen-1-ylmethyl)amino]acetyl]-methylamino]-4-methylsulfanylbutanoate Chemical compound N([C@H](CN(CC(=O)N(C)[C@@H](CCSC)C(=O)OC)CC=1C2=CC=CC=C2C=CC=1)[C@@H](C)CC)C(=O)CC1=CN=CN1CC1=CC=C(C#N)C=C1 CBSHMRMVRKNMPY-WWTZYHKLSA-N 0.000 claims description 4
- FOWLEPNFWOVZEA-WCUSUSPOSA-N (2s)-1-[2-[[(2s,3s)-2-[[2-[3-[(4-cyanophenyl)methyl]imidazol-4-yl]acetyl]amino]-3-methylpentyl]-(naphthalen-1-ylmethyl)amino]acetyl]pyrrolidine-2-carboxylic acid Chemical compound C([C@H]([C@@H](C)CC)NC(=O)CC=1N(C=NC=1)CC=1C=CC(=CC=1)C#N)N(CC=1C2=CC=CC=C2C=CC=1)CC(=O)N1CCC[C@H]1C(O)=O FOWLEPNFWOVZEA-WCUSUSPOSA-N 0.000 claims description 3
- ABXJKBIILDYYAG-ULOURMHMSA-N (2s)-2-[[2-[[(2s,3s)-2-[[2-[3-[(4-cyanophenyl)methyl]imidazol-4-yl]acetyl]amino]-3-methylpentyl]-(naphthalen-1-ylmethyl)amino]acetyl]-methylamino]-4-methylsulfanylbutanoic acid Chemical compound N([C@H](CN(CC(=O)N(C)[C@@H](CCSC)C(O)=O)CC=1C2=CC=CC=C2C=CC=1)[C@@H](C)CC)C(=O)CC1=CN=CN1CC1=CC=C(C#N)C=C1 ABXJKBIILDYYAG-ULOURMHMSA-N 0.000 claims description 3
- MCKFIPGYQRGEOZ-SDZVROEXSA-N (2s)-2-[[2-[[(2s,3s)-2-[[2-[3-[(4-methoxycarbonylphenyl)methyl]imidazol-4-yl]acetyl]amino]-3-methylpentyl]-(naphthalen-1-ylmethyl)amino]acetyl]amino]-4-methylsulfanylbutanoic acid Chemical compound N([C@H](CN(CC(=O)N[C@@H](CCSC)C(O)=O)CC=1C2=CC=CC=C2C=CC=1)[C@@H](C)CC)C(=O)CC1=CN=CN1CC1=CC=C(C(=O)OC)C=C1 MCKFIPGYQRGEOZ-SDZVROEXSA-N 0.000 claims description 3
- FWWJGHORTZMPHN-SDZVROEXSA-N (2s)-2-[[2-[[(2s,3s)-2-[[2-[3-[(4-methoxyphenyl)methyl]imidazol-4-yl]acetyl]amino]-3-methylpentyl]-(naphthalen-1-ylmethyl)amino]acetyl]amino]-4-methylsulfanylbutanoic acid Chemical compound N([C@H](CN(CC(=O)N[C@@H](CCSC)C(O)=O)CC=1C2=CC=CC=C2C=CC=1)[C@@H](C)CC)C(=O)CC1=CN=CN1CC1=CC=C(OC)C=C1 FWWJGHORTZMPHN-SDZVROEXSA-N 0.000 claims description 3
- PVELUQSNQKSZDX-JTMVAAEOSA-N (2s)-2-[[2-[[(2s,3s)-3-methyl-2-[[(2s)-1-methyl-5-oxopyrrolidine-2-carbonyl]amino]pentyl]-(naphthalen-1-ylmethyl)amino]acetyl]amino]-4-methylsulfanylbutanoic acid Chemical compound N([C@H](CN(CC(=O)N[C@@H](CCSC)C(O)=O)CC=1C2=CC=CC=C2C=CC=1)[C@@H](C)CC)C(=O)[C@@H]1CCC(=O)N1C PVELUQSNQKSZDX-JTMVAAEOSA-N 0.000 claims description 3
- 125000004209 (C1-C8) alkyl group Chemical group 0.000 claims description 3
- WDBHLCLAOCYQSZ-DQWRETEBSA-N methyl (2r)-1-[2-[[(2s,3s)-2-[[2-[3-[(4-cyanophenyl)methyl]imidazol-4-yl]acetyl]amino]-3-methylpentyl]-(naphthalen-1-ylmethyl)amino]acetyl]pyrrolidine-2-carboxylate Chemical compound C([C@H]([C@@H](C)CC)NC(=O)CC=1N(C=NC=1)CC=1C=CC(=CC=1)C#N)N(CC=1C2=CC=CC=C2C=CC=1)CC(=O)N1CCC[C@@H]1C(=O)OC WDBHLCLAOCYQSZ-DQWRETEBSA-N 0.000 claims description 3
- PIAPBQYSIJZAPM-DPGDXNODSA-N methyl (2s)-2-[[2-[[(2s,3s)-2-[[2-[3-[(4-methoxyphenyl)methyl]imidazol-4-yl]acetyl]amino]-3-methylpentyl]-(naphthalen-1-ylmethyl)amino]acetyl]amino]-4-methylsulfanylbutanoate Chemical compound N([C@H](CN(CC(=O)N[C@@H](CCSC)C(=O)OC)CC=1C2=CC=CC=C2C=CC=1)[C@@H](C)CC)C(=O)CC1=CN=CN1CC1=CC=C(OC)C=C1 PIAPBQYSIJZAPM-DPGDXNODSA-N 0.000 claims description 3
- WHPZSXHSBYSSPK-YSXQJKROSA-N methyl (2s)-2-amino-4-[[(2s,3s)-2-[[2-[3-[(4-cyanophenyl)methyl]imidazol-4-yl]acetyl]amino]-3-methylpentyl]-(naphthalen-1-ylmethyl)amino]-3-oxo-2-(2-sulfamoylethyl)butanoate Chemical compound N([C@H](CN(CC(=O)[C@@](N)(CCS(N)(=O)=O)C(=O)OC)CC=1C2=CC=CC=C2C=CC=1)[C@@H](C)CC)C(=O)CC1=CN=CN1CC1=CC=C(C#N)C=C1 WHPZSXHSBYSSPK-YSXQJKROSA-N 0.000 claims description 3
- FOWLEPNFWOVZEA-HBOJKDLWSA-N (2r)-1-[2-[[(2s,3s)-2-[[2-[3-[(4-cyanophenyl)methyl]imidazol-4-yl]acetyl]amino]-3-methylpentyl]-(naphthalen-1-ylmethyl)amino]acetyl]pyrrolidine-2-carboxylic acid Chemical compound C([C@H]([C@@H](C)CC)NC(=O)CC=1N(C=NC=1)CC=1C=CC(=CC=1)C#N)N(CC=1C2=CC=CC=C2C=CC=1)CC(=O)N1CCC[C@@H]1C(O)=O FOWLEPNFWOVZEA-HBOJKDLWSA-N 0.000 claims description 2
- PQNSPFIZCUQADZ-FRJUPVQCSA-N (2s)-2-[[2-[[(2s,3s)-2-[[2-(1-benzylimidazol-4-yl)acetyl]amino]-3-methylpentyl]-(naphthalen-1-ylmethyl)amino]acetyl]amino]-4-methylsulfanylbutanoic acid Chemical compound N([C@H](CN(CC(=O)N[C@@H](CCSC)C(O)=O)CC=1C2=CC=CC=C2C=CC=1)[C@@H](C)CC)C(=O)CC(N=C1)=CN1CC1=CC=CC=C1 PQNSPFIZCUQADZ-FRJUPVQCSA-N 0.000 claims description 2
- VDOIRLNHAAJVAF-FRJUPVQCSA-N (2s)-2-[[2-[[(2s,3s)-2-[[2-(3-benzylimidazol-4-yl)acetyl]amino]-3-methylpentyl]-(naphthalen-1-ylmethyl)amino]acetyl]amino]-4-methylsulfanylbutanoic acid Chemical compound N([C@H](CN(CC(=O)N[C@@H](CCSC)C(O)=O)CC=1C2=CC=CC=C2C=CC=1)[C@@H](C)CC)C(=O)CC1=CN=CN1CC1=CC=CC=C1 VDOIRLNHAAJVAF-FRJUPVQCSA-N 0.000 claims description 2
- WQPYGRKAOXZYEH-UTEVTPAPSA-N (2s)-2-[[2-[[(2s,3s)-3-methyl-2-[[2-[3-(naphthalen-1-ylmethyl)imidazol-4-yl]acetyl]amino]pentyl]-(naphthalen-1-ylmethyl)amino]acetyl]amino]-4-methylsulfanylbutanoic acid Chemical compound C1=CC=C2C(CN3C=NC=C3CC(=O)N[C@H](CN(CC(=O)N[C@@H](CCSC)C(O)=O)CC=3C4=CC=CC=C4C=CC=3)[C@@H](C)CC)=CC=CC2=C1 WQPYGRKAOXZYEH-UTEVTPAPSA-N 0.000 claims description 2
- SJZGJLYNRZRTHV-UTEVTPAPSA-N (2s)-2-[[2-[[(2s,3s)-3-methyl-2-[[2-[3-(naphthalen-2-ylmethyl)imidazol-4-yl]acetyl]amino]pentyl]-(naphthalen-1-ylmethyl)amino]acetyl]amino]-4-methylsulfanylbutanoic acid Chemical compound C1=CC=CC2=CC(CN3C=NC=C3CC(=O)N[C@H](CN(CC(=O)N[C@@H](CCSC)C(O)=O)CC=3C4=CC=CC=C4C=CC=3)[C@@H](C)CC)=CC=C21 SJZGJLYNRZRTHV-UTEVTPAPSA-N 0.000 claims description 2
- WWGONUOHFVVGEW-DZMJNENTSA-N (2s)-2-[[2-[[(2s,3s)-3-methyl-2-[[2-[3-[(4-nitrophenyl)methyl]imidazol-4-yl]acetyl]amino]pentyl]-(naphthalen-1-ylmethyl)amino]acetyl]amino]-4-methylsulfanylbutanoic acid Chemical compound N([C@H](CN(CC(=O)N[C@@H](CCSC)C(O)=O)CC=1C2=CC=CC=C2C=CC=1)[C@@H](C)CC)C(=O)CC1=CN=CN1CC1=CC=C([N+]([O-])=O)C=C1 WWGONUOHFVVGEW-DZMJNENTSA-N 0.000 claims description 2
- RPPZEKHGVVNKCF-GOJOWNLRSA-N (2s)-2-amino-4-[[(2s,3s)-2-[[2-[3-[(4-cyanophenyl)methyl]imidazol-4-yl]acetyl]amino]-3-methylpentyl]-(naphthalen-1-ylmethyl)amino]-3-oxo-2-(2-sulfamoylethyl)butanoic acid Chemical compound N([C@H](CN(CC(=O)[C@@](N)(CCS(N)(=O)=O)C(O)=O)CC=1C2=CC=CC=C2C=CC=1)[C@@H](C)CC)C(=O)CC1=CN=CN1CC1=CC=C(C#N)C=C1 RPPZEKHGVVNKCF-GOJOWNLRSA-N 0.000 claims description 2
- 101000581118 Homo sapiens Rho-related GTP-binding protein RhoC Proteins 0.000 claims description 2
- 102100027610 Rho-related GTP-binding protein RhoC Human genes 0.000 claims description 2
- WDBHLCLAOCYQSZ-ULOURMHMSA-N methyl (2s)-1-[2-[[(2s,3s)-2-[[2-[3-[(4-cyanophenyl)methyl]imidazol-4-yl]acetyl]amino]-3-methylpentyl]-(naphthalen-1-ylmethyl)amino]acetyl]pyrrolidine-2-carboxylate Chemical compound C([C@H]([C@@H](C)CC)NC(=O)CC=1N(C=NC=1)CC=1C=CC(=CC=1)C#N)N(CC=1C2=CC=CC=C2C=CC=1)CC(=O)N1CCC[C@H]1C(=O)OC WDBHLCLAOCYQSZ-ULOURMHMSA-N 0.000 claims description 2
- OFECGYNPIMDEMO-KDQRDQFFSA-N methyl (2s)-2-[[2-[[(2s,3s)-1-amino-2-[2-(3-benzylimidazol-4-yl)acetyl]-3-methylpentyl]-(naphthalen-1-ylmethyl)amino]acetyl]amino]-4-methylsulfanylbutanoate Chemical compound O=C([C@H](C(N)N(CC(=O)N[C@@H](CCSC)C(=O)OC)CC=1C2=CC=CC=C2C=CC=1)[C@@H](C)CC)CC1=CN=CN1CC1=CC=CC=C1 OFECGYNPIMDEMO-KDQRDQFFSA-N 0.000 claims description 2
- IKFTUSLEZMENCR-FBBJSWSOSA-N methyl (2s)-2-[[2-[[(2s,3s)-2-[[2-(1-benzylimidazol-4-yl)acetyl]amino]-3-methylpentyl]-(naphthalen-1-ylmethyl)amino]acetyl]amino]-4-methylsulfanylbutanoate Chemical compound N([C@H](CN(CC(=O)N[C@@H](CCSC)C(=O)OC)CC=1C2=CC=CC=C2C=CC=1)[C@@H](C)CC)C(=O)CC(N=C1)=CN1CC1=CC=CC=C1 IKFTUSLEZMENCR-FBBJSWSOSA-N 0.000 claims description 2
- QDLKZCSBLHDQJF-OHAFWCNASA-N methyl (2s)-2-[[2-[[(2s,3s)-2-[[2-[3-[(2e)-3,7-dimethylocta-2,6-dienyl]imidazol-4-yl]acetyl]amino]-3-methylpentyl]-(naphthalen-1-ylmethyl)amino]acetyl]amino]-4-methylsulfanylbutanoate Chemical compound N([C@H](CN(CC(=O)N[C@@H](CCSC)C(=O)OC)CC=1C2=CC=CC=C2C=CC=1)[C@@H](C)CC)C(=O)CC1=CN=CN1C\C=C(/C)CCC=C(C)C QDLKZCSBLHDQJF-OHAFWCNASA-N 0.000 claims description 2
- HQFUINJGHRJKJL-DPGDXNODSA-N methyl (2s)-2-[[2-[[(2s,3s)-2-[[2-[3-[(4-cyanophenyl)methyl]imidazol-4-yl]acetyl]amino]-3-methylpentyl]-(naphthalen-1-ylmethyl)amino]acetyl]amino]-4-methylsulfanylbutanoate Chemical compound N([C@H](CN(CC(=O)N[C@@H](CCSC)C(=O)OC)CC=1C2=CC=CC=C2C=CC=1)[C@@H](C)CC)C(=O)CC1=CN=CN1CC1=CC=C(C#N)C=C1 HQFUINJGHRJKJL-DPGDXNODSA-N 0.000 claims description 2
- ZXEQHNWICDWNLO-UMYWFGJBSA-N methyl (2s)-2-[[2-[[(2s,3s)-3-methyl-2-[[2-[3-(naphthalen-1-ylmethyl)imidazol-4-yl]acetyl]amino]pentyl]-(naphthalen-1-ylmethyl)amino]acetyl]amino]-4-methylsulfanylbutanoate Chemical compound C1=CC=C2C(CN3C=NC=C3CC(=O)N[C@H](CN(CC(=O)N[C@@H](CCSC)C(=O)OC)CC=3C4=CC=CC=C4C=CC=3)[C@@H](C)CC)=CC=CC2=C1 ZXEQHNWICDWNLO-UMYWFGJBSA-N 0.000 claims description 2
- AAUOKFRTADXFAI-UMYWFGJBSA-N methyl (2s)-2-[[2-[[(2s,3s)-3-methyl-2-[[2-[3-(naphthalen-2-ylmethyl)imidazol-4-yl]acetyl]amino]pentyl]-(naphthalen-1-ylmethyl)amino]acetyl]amino]-4-methylsulfanylbutanoate Chemical compound C1=CC=CC2=CC(CN3C=NC=C3CC(=O)N[C@H](CN(CC(=O)N[C@@H](CCSC)C(=O)OC)CC=3C4=CC=CC=C4C=CC=3)[C@@H](C)CC)=CC=C21 AAUOKFRTADXFAI-UMYWFGJBSA-N 0.000 claims description 2
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- 125000002294 quinazolinyl group Chemical group N1=C(N=CC2=CC=CC=C12)* 0.000 description 1
- IUVKMZGDUIUOCP-BTNSXGMBSA-N quinbolone Chemical compound O([C@H]1CC[C@H]2[C@H]3[C@@H]([C@]4(C=CC(=O)C=C4CC3)C)CC[C@@]21C)C1=CCCC1 IUVKMZGDUIUOCP-BTNSXGMBSA-N 0.000 description 1
- 125000004620 quinolinyl-N-oxide group Chemical group 0.000 description 1
- 125000001567 quinoxalinyl group Chemical group N1=C(C=NC2=CC=CC=C12)* 0.000 description 1
- 238000011160 research Methods 0.000 description 1
- 230000004044 response Effects 0.000 description 1
- 239000012723 sample buffer Substances 0.000 description 1
- 238000011894 semi-preparative HPLC Methods 0.000 description 1
- 238000000926 separation method Methods 0.000 description 1
- 230000019491 signal transduction Effects 0.000 description 1
- 102000030938 small GTPase Human genes 0.000 description 1
- 108060007624 small GTPase Proteins 0.000 description 1
- 238000002415 sodium dodecyl sulfate polyacrylamide gel electrophoresis Methods 0.000 description 1
- 229910052938 sodium sulfate Inorganic materials 0.000 description 1
- 235000011152 sodium sulphate Nutrition 0.000 description 1
- 235000010265 sodium sulphite Nutrition 0.000 description 1
- 238000000638 solvent extraction Methods 0.000 description 1
- 241000894007 species Species 0.000 description 1
- 239000007858 starting material Substances 0.000 description 1
- 230000000707 stereoselective effect Effects 0.000 description 1
- 238000011916 stereoselective reduction Methods 0.000 description 1
- 239000008174 sterile solution Substances 0.000 description 1
- 238000006467 substitution reaction Methods 0.000 description 1
- 150000003457 sulfones Chemical class 0.000 description 1
- 239000000375 suspending agent Substances 0.000 description 1
- 239000003765 sweetening agent Substances 0.000 description 1
- 208000024891 symptom Diseases 0.000 description 1
- QQWYQAQQADNEIC-RVDMUPIBSA-N tert-butyl [(z)-[cyano(phenyl)methylidene]amino] carbonate Chemical compound CC(C)(C)OC(=O)O\N=C(/C#N)C1=CC=CC=C1 QQWYQAQQADNEIC-RVDMUPIBSA-N 0.000 description 1
- 125000005931 tert-butyloxycarbonyl group Chemical group [H]C([H])([H])C(OC(*)=O)(C([H])([H])[H])C([H])([H])[H] 0.000 description 1
- WHRNULOCNSKMGB-UHFFFAOYSA-N tetrahydrofuran thf Chemical compound C1CCOC1.C1CCOC1 WHRNULOCNSKMGB-UHFFFAOYSA-N 0.000 description 1
- 125000003718 tetrahydrofuranyl group Chemical group 0.000 description 1
- 125000003039 tetrahydroisoquinolinyl group Chemical group C1(NCCC2=CC=CC=C12)* 0.000 description 1
- 125000001712 tetrahydronaphthyl group Chemical group C1(CCCC2=CC=CC=C12)* 0.000 description 1
- 125000000147 tetrahydroquinolinyl group Chemical group N1(CCCC2=CC=CC=C12)* 0.000 description 1
- WROMPOXWARCANT-UHFFFAOYSA-N tfa trifluoroacetic acid Chemical compound OC(=O)C(F)(F)F.OC(=O)C(F)(F)F WROMPOXWARCANT-UHFFFAOYSA-N 0.000 description 1
- 230000001225 therapeutic effect Effects 0.000 description 1
- 125000006089 thiamorpholinyl sulfoxide group Chemical group 0.000 description 1
- 125000002769 thiazolinyl group Chemical group 0.000 description 1
- 125000004589 thienofuryl group Chemical group O1C(=CC2=C1C=CS2)* 0.000 description 1
- 125000004587 thienothienyl group Chemical group S1C(=CC2=C1C=CS2)* 0.000 description 1
- 125000004568 thiomorpholinyl group Chemical group 0.000 description 1
- 238000004448 titration Methods 0.000 description 1
- 230000000699 topical effect Effects 0.000 description 1
- 231100000419 toxicity Toxicity 0.000 description 1
- 230000001988 toxicity Effects 0.000 description 1
- 238000012546 transfer Methods 0.000 description 1
- 238000011830 transgenic mouse model Methods 0.000 description 1
- 125000005270 trialkylamine group Chemical group 0.000 description 1
- GPRLSGONYQIRFK-MNYXATJNSA-N triton Chemical compound [3H+] GPRLSGONYQIRFK-MNYXATJNSA-N 0.000 description 1
- 125000002221 trityl group Chemical group [H]C1=C([H])C([H])=C([H])C([H])=C1C([*])(C1=C(C(=C(C(=C1[H])[H])[H])[H])[H])C1=C([H])C([H])=C([H])C([H])=C1[H] 0.000 description 1
- 125000000391 vinyl group Chemical group [H]C([*])=C([H])[H] 0.000 description 1
- 229920002554 vinyl polymer Polymers 0.000 description 1
- 230000003612 virological effect Effects 0.000 description 1
- 238000005406 washing Methods 0.000 description 1
- 230000003442 weekly effect Effects 0.000 description 1
- 238000010626 work up procedure Methods 0.000 description 1
- 235000005074 zinc chloride Nutrition 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D233/00—Heterocyclic compounds containing 1,3-diazole or hydrogenated 1,3-diazole rings, not condensed with other rings
- C07D233/54—Heterocyclic compounds containing 1,3-diazole or hydrogenated 1,3-diazole rings, not condensed with other rings having two double bonds between ring members or between ring members and non-ring members
- C07D233/64—Heterocyclic compounds containing 1,3-diazole or hydrogenated 1,3-diazole rings, not condensed with other rings having two double bonds between ring members or between ring members and non-ring members with substituted hydrocarbon radicals attached to ring carbon atoms, e.g. histidine
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P35/00—Antineoplastic agents
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P43/00—Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K5/00—Peptides containing up to four amino acids in a fully defined sequence; Derivatives thereof
- C07K5/02—Peptides containing up to four amino acids in a fully defined sequence; Derivatives thereof containing at least one abnormal peptide link
- C07K5/0205—Peptides containing up to four amino acids in a fully defined sequence; Derivatives thereof containing at least one abnormal peptide link containing the structure -NH-(X)3-C(=0)-, e.g. statine or derivatives thereof
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K5/00—Peptides containing up to four amino acids in a fully defined sequence; Derivatives thereof
- C07K5/04—Peptides containing up to four amino acids in a fully defined sequence; Derivatives thereof containing only normal peptide links
- C07K5/06—Dipeptides
- C07K5/06008—Dipeptides with the first amino acid being neutral
- C07K5/06017—Dipeptides with the first amino acid being neutral and aliphatic
- C07K5/06026—Dipeptides with the first amino acid being neutral and aliphatic the side chain containing 0 or 1 carbon atom, i.e. Gly or Ala
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K38/00—Medicinal preparations containing peptides
Definitions
- Ras protein is part of a signalling pathway that links cell surface growth factor receptors to nuclear signals initiating cellular proliferation.
- Biological and biochemical studies of Ras action indicate that Ras functions like a G-regulatory protein.
- Ras In the inactive state, Ras is bound to GDP.
- Ras Upon growth factor receptor activation Ras is induced to exchange GDP for GTP and undergoes a conformational change.
- the GTP-bound form of Ras propagates the growth stimulatory signal until the signal is terminated by the intrinsic GTPase activity of Ras, which returns the protein to its inactive GDP bound form (D.R. Lowy and D.M. Willumsen, Ann. Rev. Biochem. 62:851-891 (1993)).
- Mutated ras genes are found in many human cancers, including colorectal carcinoma, exocrine pancreatic carcinoma, and myeloid leukemias.
- the protein products of these genes are defective in their GTPase activity and constitutively transmit a growth stimulatory signal.
- Ras C-terminus contains a sequence motif termed a "CAAX” or "Cys-Aaa 1 -Aaa 2 -Xaa” box (Cys is cysteine, Aaa is an aliphatic amino acid, the Xaa is any amino acid) (Willumsen et al, Nature 310:583-586 (1984)).
- this motif serves as a signal sequence for the enzymes farnesyl-protein transferase or geranylgeranyl-protein transferase, which catalyze the alkylation of the cysteine residue of the CAAX motif with a C 15 or C 20 isoprenoid, respectively.
- the Ras protein is one of several proteins that are known to undergo post-trans lational famesylation.
- Other farnesylated proteins include the Ras-related GTP-binding proteins such as Rho, fungal mating factors, the nuclear lamins, and the gamma subunit of transducin.
- James, et al., J. Biol. Chem. 269, 14182 (1994) have identified a peroxisome associated protein Pxf which is also farnesylated.
- James, et al. have also suggested that there are farnesylated proteins of unknown structure and function in addition to those listed above.
- farnesyl-protein transferase inhibitors are inhibitors of proliferation of vascular smooth muscle cells and are therefore useful in the prevention and thereapy of arteriosclerosis and diabetic disturbance of blood vessels (JP H7- 112930).
- FPTase farnesyl-protein transferase
- FPP famesyl diphosphate
- Ras protein substrates
- the peptide derived inhibitors that have been described are generally cysteine containing molecules that are related to the CAAX motif that is the signal for protein prenylation.
- Such inhibitors may inhibit protein prenylation while serving as alternate substrates for the farnesyl-protein transferase enzyme, or may be purely competitive inhibitors (U.S. Patent 5,141 ,851 , University of Texas; N.E. Kohl et al, Science, 260: 1934-1937 (1993); Graham, et al., J. Med. Chem., 37, 725 (1994)).
- deletion of the thiol from a CAAX derivative has been shown to dramatically reduce the inhibitory potency of the compound.
- the thiol group has been shown to dramatically reduce the inhibitory potency of the compound.
- the thiol group
- the present invention comprises analogs of the CAAX motif of the protein Ras that is modified by famesylation in vivo. These CAAX analogs inhibit the famesylation of Ras. Furthermore, these CAAX analogues differ from those previously described as inhibitors of Ras famesyl transferase in that they do not have a thiol moiety. The lack of the thiol offers unique advantages in terms of improved pharmacokinetic behavior in animals, prevention of thiol- dependent chemical reactions, such as rapid autoxidation and disulfide formation with endogenous thiols, and reduced systemic toxicity. Further contained in this invention are chemotherapeutic compositions containing these famesyl transferase inhibitors and methods for their production.
- Ras famesyl transferase inhibitors are illustrated by the formula I:
- R 1 is independently selected from:
- R 2a and R 2b are independently selected from:
- R 2a and R 2b are combined to form - (CH 2 ) s - ;
- R 3 and R 4 are independently selected from:
- R 3 and R 4 are combined to form - (CH 2 ) s - ;
- R 5a and R 5b are independently selected from:
- R 7a is selected from
- R 7b is selected from
- a sulfonyl group which is bonded to an unsubstituted or substituted group selected from aryl, heterocyclic, cycloalkyl and C 1 -C 6 alkyl substituted with hydrogen or an unsubstituted or substituted group selected from aryl, heterocyclic and cycloalkyl;
- R 8 is independently selected from:
- R 9 is selected from:
- R 10 C(O)NR 10 -, CN, (R 10 ) 2 N-C(NR 10 )-, R 10 C(O)-, R 10 OC(O)-, N 3 , -N(R 10 ) 2 , or R 1 1 OC(O)NR 10 - ;
- R 10 is independently selected from hydrogen, C 1 -C 6 alkyl and aryl;
- R 1 1 is independently selected from C 1 -C 6 alkyl and aryl;
- R 12 is independently selected from hydrogen and C 1 -C 6 alkyl
- R 14 is independently selected from hydrogen, C 1 -C 6 alkyl and benzyl
- R 15 is independently selected from hydrogen and C 1 -C 6 alkyl
- V is selected from:
- V is not hydrogen if A 1 is S(O) m and V is not hydrogen if A 1 is a bond, n is 0 and A 2 is S(O) m or a bond;
- W is a heterocycle;
- Z is independently H 2 or O;
- n 0, 1 or 2;
- n 0, 1, 2, 3 or 4;
- p 0, 1, 2, 3 or 4;
- r is 0 to 5, provided that r is 0 when V is hydrogen;
- s is 4 or 5;
- t is 3, 4 or 5; or the pharmaceutically acceptable salts thereof.
- R 1 is independently selected from:
- R 2a and R 2b are independently selected from:
- substituent is selected from F, Cl, Br, NO 2 , R 10 O-, R 1 1 S(O) m -.
- R 2a and R 2b are combined to form - (CH 2 ) s - ;
- R 3 and R 4 are independently selected from:
- substituent is selected from F, Cl, Br,
- R 3 and R 4 are combined to form - (CH 2 ) s - ;
- R 5a and R 5b are independently selected from:
- substituent is selected from F, Cl, Br, N(R 10 ) 2 , NO 2 , R 10 O-, R 1 1 S(O) m -, R 10 C(O)NR 10 -,
- R 5a and R 5b are combined to form - (CH 2 ) s - wherein one of the carbon atoms is optionally replaced by a moiety selected from: O, S(O) m.
- R 5a or R 5b are combined with R 14 to form a ring such that
- R 7a is selected from
- R 7b is selected from
- R 8 is independently selected from:
- perfluoroalkyl F, Cl, Br, R 10 O-, R 1 1 S(O) m -, R 10 C(O)NH-, CN, H 2 N-C(NH)-, R 10 C(O)-,
- R 10 OC(O)-, N 3 , -N(R 10 ) 2 , or R l lOC(O)NH-;
- R 9 is selected from:
- R 10 C(O)NR 10 -, CN, (R 10 ) 2 N-C(NR 10 )-, R 10 C(O)-, R 10 OC(O)-, N 3 , -N(R 10 ) 2 , or R 1 1 OC(O)NR 10 -;
- R 10 is independently selected from hydrogen, C 1 -C 6 alkyl and aryl;
- R 1 1 is independently selected from C 1 -C 6 alkyl and aryl
- R 12 is independently selected from' hydrogen and C 1 -C 6 alkyl
- R 13 is independently selected from C 1 -C 6 alkyl
- R 14 is independently selected from hydrogen,C 1 -C 6 alkyl and benzyl
- V is selected from:
- V is not hydrogen if A 1 is S(O) m and V is not hydrogen if A 1 is a bond, n is 0 and A 2 is S(O) m or a bond;
- W is a heterocycle
- Z is independently H 2 or O; m is 0, 1 or 2;
- n 0, 1 , 2, 3 or 4;
- p 0, 1 , 2, 3 or 4;
- r is 0 to 5, provided that r is 0 when V is hydrogen;
- s is 4 or 5;
- t is 3, 4 or 5; or the pharmaceutically acceptable salts thereof.
- R 1 is independently selected from: a) hydrogen,
- R 2a and R 2b are independently selected from:
- R 2a and R 2b are combined to form - (CH 2 ) s - ;
- R 3 and R 4 are independently selected from:
- substituent is selected from F, Cl, Br, N(R 10 ) 2 , NO 2 , R 10 O-, R 1 1 S(O) m -, R 10 C(O)NR 10 -,
- R 3 and R 4 are combined to form - (CH 2 ) s - .
- X-Y is
- R 7a is selected from
- R 7b is selected from
- R 8 is independently selected from:
- R 10 C(O)NH-, CN, H 2 N-C(NH)-, R 10 C(O)-, R 10 OC(O)-, N 3 , -N(R 10 ) 2 , or R 1 1 OC(O)NH-;
- R 9 is selected from:
- R 10 C(O)NR 10 -, CN, (R 10 ) 2 N-C(NR 10 )-, R 10 C(O)-, R 10 OC(O)-, N 3 , -N(R 10 ) 2 , or R 1 1 OC(O)NR 10 -;
- R 10 is independently selected from hydrogen, C 1 -C 6 alkyl and aryl;
- R 1 1 is independently selected from C 1 -C 6 alkyl and aryl
- R 12 is independently selected from hydrogen and C 1 -C 6 alkyl
- R 14 is independently selected from hydrogen,C 1 -C 6 alkyl and benzyl
- V is selected from:
- V is not hydrogen if A 1 is S(O) m and V is not hydrogen if A 1 is a bond, n is 0 and A 2 is S(O) m or a bond; W is a heterocycle;
- Z is independently H 2 or O; m is 0, 1 or 2;
- n 0, 1, 2, 3 or 4;
- p 0, 1, 2, 3 or 4;
- q 0, 1 or 2;
- r is 0 to 5, provided that r is 0 when V is hydrogen;
- s is 4 or 5; or the pharmaceutically acceptable salts thereof.
- R 1 is independently selected from: a) hydrogen,
- R 10 O-, R 1 1 S(O) m -_ R 1O C(O)NR 10 -, CN, NO 2 ,
- R 2a and R 2b are independently selected from:
- R 2a and R 2b are combined to form - (CH 2 ) s - ;
- R 3 and R 4 are independently selected from:
- substituent is selected from F, Cl, Br, N(R 10 ) 2 , NO 2 , R 10 O-, R 1 1 S(O) m -, R 10 C(O)NR 10 -,
- R 3 and R 4 are combined to form - (CH 2 ) s - ;
- X-Y is
- R 7a is selected from
- R 7b is selected from
- R 8 is independently selected from:
- R 10 OC(O)-, N 3 , -N(R 10 ) 2 , or R 1 1 OC(O)NH-;
- R 9 is selected from:
- R 10 C(O)NR 10 -, CN, (R 10 ) 2 N-C(NR 10 )-, R 10 c(O)-, R 10 OC(O)-, N 3 , -N(R 10 ) 2 , or R 1 1 OC(O)NR 10 -;
- R 10 is independently selected from hydrogen, C 1 -C 6 alkyl and aryl;
- R 1 1 is independently selected from C 1 -C 6 alkyl and aryl
- R 12 is independently selected from hydrogen and C 1 -C 6 alkyl
- R 14 is independently selected from hydrogen,C 1 -C 6 alkyl and benzyl
- V is selected from:
- V is not hydrogen if A 1 is S(O) m and V is not hydrogen if A 1 is a bond, n is 0 and A 2 is S(O) m or a bond; W is a heterocycle;
- Z is independently H 2 or O; m is 0, 1 or 2;
- n 0, 1, 2, 3 or 4;
- p 0, 1, 2, 3 or 4;
- q 0, 1 or 2;
- r is 0 to 5, provided that r is 0 when V is hydrogen;
- s is 4 or 5; or the pharmaceutically acceptable salts thereof.
- Ras famesyl transferase inhibitors are illustrated by the formula I:
- R 1 is independently selected from:
- R 2a is selected from:
- amino acid is selected from alanine, leucine, isoleucine and valine;
- R 2b is selected from hydrogen and C 1 -C 6 alkyl
- R 2a and R 2b are combined to form - (CH 2 ) s - ;
- R 3 and R 4 are independently selected from:
- R 5a is selected from:
- amino acid is selected from:
- R 5b is selected from:
- R 5a or R 5b are combined with R 14 to form a ring such that
- R 7a is selected from
- heterocycle is selected from pyrrolidinyl, imidazolyl, pyridinyl, thiazolyl, pyridonyl, 2- oxopiperidinyl, indolyl, quinolinyl, isoquinolinyl, and thienyl;
- R 7b is selected from
- a sulfonyl group which is bonded to an unsubstituted or substituted group selected from aryl, heterocyclic, cycloalkyl and C 1 -C 6 alkyl substituted with hydrogen or an unsubstituted or substituted group selected from aryl, heterocyclic and cycloalkyl;
- heterocycle is selected from pyrrolidinyl, imidazolyl, pyridinyl, thiazolyl, pyridonyl, 2- oxopiperidinyl, indolyl, quinolinyl, isoquinolinyl, and thienyl;
- R 8 is selected from:
- R 10 C(O)-, R 10 OC(O)-, -N(R 10 ) 2 , or R 1 1 OC(O)NR 10 -;
- R 9 is selected from:
- R 12 is independently selected from hydrogen and C 1 -C 6 alkyl
- R 14 is independently selected from hydrogen and C 1 -C 6 alkyl
- R 15 is independently selected from hydrogen and C 1 -C 6 alkyl
- V is selected from: a) heterocycle selected from pyrrolidinyl, imidazolyl, pyridinyl, thiazolyl, pyridonyl, 2-oxopiperidinyl, indolyl, quinolinyl, isoquinolinyl, and thienyl, b) aryl,
- V is not hydrogen if A 1 is S(O) m and V is not hydrogen if A 1 is a bond, n is 0 and A 2 is S(O) m or a bond;
- W is a heterocycle selected from pyrrolidinyl, imidazolyl, pyridinyl, thiazolyl, pyridonyl, piperidinyl, 2-oxopiperidinyl, indolyl, quinolinyl, or isoquinolinyl;
- Z is independently H 2 or O; m is 0, 1 or 2;
- n 0, 1, 2, 3 or 4;
- p 0, 1, 2, 3 or 4;
- r is 0 to 2;
- s is 4 or 5;
- t is 3, 4 or 5; or the pharmaceutically acceptable salts thereof.
- R 1 is independently selected from:
- R 2a is selected from:
- amino acid is selected from alanine, leucine, isoleucine and valine;
- C 1 -C 10 alkyl C 2 -C 10 alkenyl, C 3 -C 10 cycloalkyl, aryl or heterocyclic group, wherein the substituent is selected from F, Cl, Br, NO 2 , R 10 0-, R 1 1 S(O) m -, R 10 C(O)NR 10 -, CN, (R 10 ) 2 N-C(NR 10 )-, R 10 C(O)-, R 10 OC(O)-, N 3 , -N(R 10 ) 2 , R 1 1 OC(O)NR 10 - and C 1 -C 20 alkyl, and c) C 1 -C 6 alkyl substituted with an unsubstituted or substituted group selected from aryl, heterocycle and C 3 - C 10 cycloalkyl; and R 2b is selected from hydrogen and C 1 -C 6 alkyl; or
- R 2a and R 2b are combined to form - (CH 2 ) s - ;
- R 3 and R 4 are independently selected from:
- R 5a is selected from:
- amino acid is selected from:
- R 5a is selected from: a) hydrogen
- R 5a or R 5b are combined with R 14 to form a ring such that
- R 7a is selected from
- heterocycle is selected from pyrrolidinyl, imidazolyl, pyridinyl, thiazolyl, pyridonyl, 2- oxopiperidinyl, indolyl, quinolinyl, isoquinolinyl, and thienyl;
- R 7b is selected from
- a sulfonyl group which is bonded to an unsubstituted or substituted group selected from aryl, heterocyclic, cycloalkyl and C 1 -C 6 alkyl substituted with hydrogen or an unsubstituted or substituted group selected from aryl, heterocyclic and cycloalkyl;
- heterocycle is selected from pyrrolidinyl, imidazolyl, pyridinyl, thiazolyl, pyridonyl, 2- oxopiperidinyl, indolyl, quinolinyl, isoquinolinyl, and thienyl;
- R 8 is selected from:
- R 10 OC(O)-, -N(R 10 ) 2 , or R 1 1 OC(O)NR 10 -;
- R 9 is selected from:
- R 1 1 is independently selected from C 1 -C 6 alkyl and aryl
- R 12 is independently selected from hydrogen and C 1 -C 6 alkyl
- R 13 is 1 ,1-dimethylethyl
- R 14 is independently selected from hydrogen and C 1 -C 6 alkyl
- R 15 is independently selected from hydrogen and C 1 -C 6 alkyl
- V is selected from:
- heterocycle selected from pyrrolidinyl, imidazolyl, pyridinyl, thiazolyl, pyridonyl, 2-oxopiperidinyl, indolyl, quinolinyl, isoquinolinyl, and thienyl, b) aryl,
- V is not hydrogen if A 1 is S(O) m and V is not hydrogen if A 1 is a bond, n is 0 and A 2 is S(O) m or a bond;
- W is a heterocycle selected from pyrrolidinyl, imidazolyl, pyridinyl, thiazolyl, pyridonyl, piperidinyl, 2-oxopiperidinyl, indolyl,
- Z is independently H 2 or O; m is 0, 1 or 2;
- n 0, 1, 2, 3 or 4;
- p 0, 1, 2, 3 or 4;
- r is 0 to 2;
- s is 4 or 5;
- t 3, 4 or 5; or the pharmaceutically acceptable salts thereof.
- the inhibitors of famesyl transferase are illustrated by the formula II I:
- R 1 is independently selected from:
- R 2a is selected from:
- amino acid is selected from alanine, leucine, isoleucine and valine;
- C 1 -C 10 alkyl C 2 -C 10 alkenyl, C 3 -C 10 cycloalkyl, aryl or heterocyclic group, wherein the substituent is selected from F, Cl, Br, NO 2 , R 10 O-, R 1 1 S(O) m , R 10 C(O)NR 10 -, CN, (R 10 ) 2 N-C(NR 10 )-, R 10 C(O)-, R 10 OC(O)-, N 3 , -N(R 10 ) 2 , R 1 1 OC(O)NR 10 - and C 1 -C 20 alkyl, and c) C 1 -C 6 alkyl substituted with an unsubstituted or substituted group selected from aryl, heterocycle and C 3 -
- R 2b is selected from hydrogen and C 1 -C 6 alkyl
- R 2a and R 2b are combined to form - (CH 2 ) s - ;
- R 3 and R 4 are independently selected from:
- R 7a is selected from
- heterocycle is selected from pyrrolidinyl, imidazolyl, pyridinyl, thiazolyl, pyridonyl, 2- oxopiperidinyl, indolyl, quinolinyl, isoquinolinyl, and thienyl;
- R 7b is selected from
- a sulfonyl group which is bonded to an unsubstituted or substituted group selected from aryl, heterocyclic, cycloalkyl and C 1 -C 6 alkyl substituted with hydrogen or an unsubstituted or substituted group selected from aryl, heterocyclic and cycloalkyl;
- heterocycle is selected from pyrrolidinyl, imidazolyl, pyridinyl, thiazolyl, pyridonyl, 2- oxopiperidinyl, indolyl, quinolinyl, isoquinolinyl, and thienyl;
- R 8 is selected from:
- R 1 1 is independently selected from C 1 -C 6 alkyl and aryl
- R 12 is independently selected from hydrogen and C 1 -C 6 alkyl
- V is selected from:
- heterocycle selected from pyrrolidinyl, imidazolyl, pyridinyl, thiazolyl, pyridonyl, 2-oxopiperidinyl, indolyl, quinolinyl, isoquinolinyl, and thienyl, b) aryl, c) C 1 -C 20 alkyl wherein from 0 to 4 non-terminal carbon atoms are replaced with a heteroatom selected from O, S, and N, and
- V is not hydrogen if A 1 is S(O) m and V is not hydrogen if A 1 is a bond, n is 0 and A 2 is S(O) m or a bond;
- W is a heterocycle selected from pyrrolidinyl, imidazolyl, pyridinyl, thiazolyl, pyridonyl, piperidinyl, 2-oxopiperidinyl, indolyl,
- Z is independently H 2 or O; m is 0, 1 or 2;
- n 0, 1 , 2, 3 or 4;
- p 0, 1 , 2, 3 or 4;
- q 0, 1 or 2;
- r is 0 to 2;
- s is 4 or 5; or the pharmaceutically acceptable salts thereof.
- R 1 is independently selected from:
- R 2a is selected from:
- amino acid is selected from alanine, leucine, isoleucine and valine;
- R 2a and R 2b are combined to form - (CH 2 ) s - ;
- R 3 and R 4 are independently selected from:
- R 7a is selected from
- heterocycle is selected from pyrrolidinyl, imidazolyl, pyridinyl, thiazolyl, pyridonyl, 2- oxopiperidinyl, indolyl, quinolinyl, isoquinolinyl, and thienyl;
- R 7b is selected from
- a sulfonyl group which is bonded to an unsubstituted or substituted group selected from aryl, heterocyclic, cycloalkyl and C 1 -C 6 alkyl substituted with hydrogen or an unsubstituted or substituted group selected from aryl, heterocyclic and cycloalkyl;
- heterocycle is selected from pyrrolidinyl, imidazolyl, pyridinyl, thiazolyl, pyridonyl, 2- oxopiperidinyl, indolyl, quinolinyl, isoquinolinyl, and thienyl;
- R 8 is selected from:
- R 9 is selected from:
- R 1 1 is independently selected from C 1 -C 6 alkyl and aryl
- R 12 is independently selected from hydrogen and C 1 -C 6 alkyl
- R 14 is independently selected from hydrogen and C 1 -C 6 alkyl
- V is selected from: a) heterocycle selected from pyrrolidinyl, imidazolyl, pyridinyl, thiazolyl, pyridonyl, 2-oxopiperidinyl, indolyl, quinolinyl, isoquinolinyl, and thienyl, b) aryl,
- V is not hydrogen if A 1 is S(O) m and V is not hydrogen if A 1 is a bond, n is 0 and A 2 is S(O) m or a bond;
- W is a heterocycle selected from pyrrolidinyl, imidazolyl, pyridinyl, thiazolyl, pyridonyl, piperidinyl, 2-oxopiperidinyl, indolyl, quinolinyl, or isoquinolinyl;
- Z is independently H 2 or O; m is 0, 1 or 2;
- n 0, 1 , 2, 3 or 4;
- p 0, 1, 2, 3 or 4;
- q 0, 1 or 2;
- r is 0 to 2;
- s is 4 or 5; or the pharmaceutically acceptable salts thereof.
- amino acids which are disclosed are identified both by conventional 3 letter and single letter abbreviations as indicated below:
- the compounds of the present invention may have asymmetric centers and occur as racemates, racemic mixtures, and as individual diastereomers, with all possible isomers, including optical isomers, being included in the present invention.
- alkyl is intended to include both branched and straight-chain saturated aliphatic hydrocarbon groups having the specified number of carbon atoms.
- cycloalkyl is intended to include non- aromatic cyclic hydrocarbon groups having the specified number of carbon atoms.
- examples of cycloalkyl groups include cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl and the like.
- alkenyl groups include those groups having the specified number of carbon atoms and having one or several double bonds. Examples of alkenyl groups include vinyl, allyl, isopropenyl, pentenyl, hexenyl, heptenyl, cyclopropenyl, cyclobutenyl,
- cyclopentenyl cyclohexenyl, 1-propenyl, 2-butenyl, 2-methyl-2- butenyl, isoprenyl, famesyl, geranyl, geranylgeranyl and the like.
- aryl is intended to include any stable monocyclic, bicyclic or tricyclic carbon ring(s) of up to 7 members in each ring, wherein at least one ring is aromatic.
- aryl groups include phenyl, naphthyl, anthracenyl, biphenyl,
- heterocycle or heterocyclic represents a stable 5- to 7-membered monocyclic or stable 8- to 11- membered bicyclic or stable 11-15 membered tricyclic heterocyclic ring which is either saturated or unsaturated, and which consists of carbon atoms and from one to four heteroatoms selected from the group consisting of N, O, and S, and including any bicyclic group in which any of the above-defined heterocyclic rings is fused to a benzene ring.
- the heterocyclic ring may be attached at any
- heterocyclic elements include, but are not limited to, azepinyl, benzimidazolyl, benzisoxazolyl,
- benzofurazanyl benzopyranyl, benzothiopyranyl, benzofuryl, benzothiazolyl, benzothienyl, benzoxazolyl, chromanyl, cinnolinyl, dihydrobenzofuryl, dihydro-benzothienyl, dihydrobenzothiopyranyl, dihydrobenzothio-pyranyl sulfone, furyl, imidazolidinyl,
- substituted aryl substituted heterocycle
- substituted cycloalkyl substituted cycloalkyl
- cyclic group which is substituted with 1 or 2 substitutents selected from the group which includes but is not limited to F, Cl, Br, NH 2 , N( C 1 -C 6 alkyl) 2 , CF 3 , NO 2 ,
- cyclic amine moiety having 5 or 6 members in the ring, such a cyclic amine which may be optionally fused to a phenyl or cyclohexyl ring.
- a cyclic amine moiety include, but are not limited to, the following specific structures:
- cyclic moieties are formed.
- cyclic moieties include, but are not limited to:
- cyclic moieties as described hereinabove for R 2a and R 2b and R 3 and R 4 are formed.
- such cyclic moieties may optionally include a heteroatom(s). Examples of such heteroatom-containing cyclic moieties include, but are not limited to:
- R 1 is selected from: hydrogen, and C 1 -C 6 alkyl.
- R 2a and R 2b are independently selected from: a side chain of a naturally occurring amino acid and C 1 -C 6 alkyl unsubstituted or substituted with an aryl group.
- R 3 and R 4 are independently selected from:
- R 5a and R 5b are independently selected from: a side chain of a naturally occurring amino acid, methionine sulfoxide, methionine sulfone and unsubstituted or substituted C 1 -C 6 alkyl .
- X-Y is selected from:
- R 7b C 1 -C 6 alkyl substituted with hydrogen or an unsubstituted or substituted aryl group.
- R 8 is selected from: hydrogen, perfluoroalkyl, F, Cl, Br, R 10 O-, R 1 1 S(O) m -, CN, NO 2 , R 10 C(O)-, R 10 OC(O)-,
- R 9 is hydrogen.
- R 10 is selected from H, C 1 -C 6 alkyl and benzyl.
- a 1 and A 2 are a bond.
- V is selected from hydrogen, heterocycle and aryl.
- n, p and r are independently 0, 1 , or 2.
- t is 3.
- the pharmaceutically acceptable salts of the compounds of this invention include the conventional non-toxic salts of the
- such conventional non- toxic salts include those derived from inorganic acids such as
- -N(R 10 ) 2 represents -NHH, -NHCH 3 , -NHC 2 H 5 , etc. It is intended that the definition of any substituent or variable (e.g., R 10 , Z, n, etc.) at a particular location in a molecule be independent of its definitions elsewhere in that molecule.
- -N(R 10 ) 2 represents -NHH, -NHCH 3 , -NHC 2 H 5 , etc. It is
- the pharmaceutically acceptable salts of the compounds of this invention can be synthesized from the compounds of this invention which contain a basic moiety by conventional chemical methods. Generally, the salts are prepared by reacting the free base with stoichiometric amounts or with an excess of the desired salt- forming inorganic or organic acid in a suitable solvent or various combinations of solvents.
- the compounds of the invention can be synthesized from their constituent amino acids by conventional peptide synthesis techniques, and the additional methods described below. Standard methods of peptide synthesis are disclosed, for example, in the following works: Schroeder et al, "The Peptides", Vol.
- TFA Trifluoroacetic acid
- THF Tetrahydrofuran
- Reaction A Amide bond formation and protecting group cleavage using standard solution or solid phase methodologies.
- Reaction B Preparation of a reduced peptide subunit by 1 reductive alkylation of an amine by an aldehyde using sodium cyanoborohydride or other reducing agents.
- Reaction C Alkylation of a reduced peptide subunit with an alkyl or aralkyl halide or, alternatively, reductive alkylation of a reduced peptide subunit with an aldehyde using sodium
- Reaction E Preparation of a reduced subunit by borane reduction of the amide moiety.
- Reaction B Preparation of reduced peptide subunits by reductive alkylation
- R A and R B are R 2a , R 2b , R 3 , R 4 , R 5a or R 5b as previously defined;
- X L is a leaving group, e.g., Br- , I- or MsO-; and R C is defined such that R 7b is generated by the reductive alkylation
- Reaction Schemes A-E illustrate bond-forming and peptide modifying reactions incorporating acyclic peptide units. It is well understood that such reactions are equally useful when the - NHC(R A ) - moiety of the reagents and compounds illustrated is replaced with the following moiety:
- Reaction Scheme F outlines the preparation of the alkene isosteres utilizing standard manipulations such as Weinreb amide formation, Grignard reaction, acetylation, ozonolysis, Wittig reaction, ester hydrolysis, peptide coupling reaction, mesylation, cleavage of peptide protecting groups, reductive alkylation, etc., as may be known in the literature or exemplified in the Experimental Procedure.
- the key reactions are: stereoselective reduction of the Boc-amino-enone to the
- alkane analogs are prepared in a similar manner by including an additional catalytic hydrogenation step as outlined in Reaction Scheme G.
- aminoalcohol H-1 is acylated with alpha-chloroacetyl chloride in the presence of trialkylamines to yield amide H-2.
- a deprotonation reagent e.g., sodium hydride or potassium t-butoxide
- THF ethereal solvent
- X L is a leaving group such as Br, I- or Cl- in THF/DME (1,2-dimethoxyethane) in the presence of a suitable base, preferably NaHMDS [sodium bis(trimethylsilyl)amide], affords H-5, which is retreated with NaHMDS followed by either protonation or the addition of an alkyl halide R 4 ⁇ to give H-6a or H-6b.
- a suitable base preferably NaHMDS [sodium bis(trimethylsilyl)amide]
- H-6a can be prepared from H-4 via an aldol condensation approach. Namely, deprotonation of H-4 with NaHMDS followed by the addition of a carbonyl compound
- R y R z CO gives the adduct H-7 (wherein R y and R z are selected such that R 3 is eventually provided.
- Dehydration of H-7 can be effected by mesylation and subsequent elimination catalyzed by DBU (1 ,8- diazabicyclo[5.4.0]undec-7-ene) or the direct treatment of H-7 with phosphorus oxychloride in pyridine to give olefin H-8. Then, catalytic hydrogenation of H-8 yields H-6a. Direct hydrolysis of H-6 with lithium hydrogen peroxide in aqueous THF will produce acid H- 9b.
- Hydrolysis of compounds H-14 to the corresponding hydroxy acids and acids, respectively, is accomplished by standard methods such as treatment with NaOH in alcoholic or aqueous milieux followed by careful acidifcation with dilute BCI .
- thia, oxothia and dioxothia isostere compounds of this invention are prepared in accordance to the route depicted in Scheme I.
- Aminoalcohol I-1 is derivatized with BOC 2 O to give l-15.
- Mesylation of l-15 followed by reaction with methyl alpha- mercaptoacetate in the presence of cesium carbonate gives sulfide l- 16.
- Removal of the BOC group in l-16 with TFA followed by neutralization with di-isopropylethylamine leads to lactam 1-17.
- N- BOC derivative l-18 is obtained via the reaction of l-17 with BOC anhydride in THF catalyzed by DMAP.
- the N-BOC group of either l-21 or l-22 is readily removed by treatment with gaseous hydrogen chloride.
- the resultant amine hydrochloride l-23 undergoes reductive alkylation in the presence of an aldehyde R x CHO (l-12) and a reducing agent (e.g., sodium cyanoborohydride); or acylation in the presence of R x COOH (l-13) and a peptide coupling reagent to afford the products l-24 and l-25.
- Reaction Schemes J - M illustrate reactions wherein the non- sulfhydryl-containing moiety at the N-terminus of the compounds of the instant invention is attached to an acyclic peptide unit which may be further elaborated to provide the instant compounds. These reactions may be employed in a linear sequence to provide the compounds of the invention or they may be used to synthesize fragments which are
- aldehydes such as V, as shown in Reaction Scheme J.
- the aldehydes can be prepared by standard procedures, such as that described by O. P. Goel, U. Krolls, M. Stier and S. Kesten in Organic Syntheses, 1988, 67, 69-75, from the appropriate amino acid (Reaction Scheme J).
- the reductive alkylation can be accomplished at pH 5-7 with a variety of reducing agents, such as sodium triacetoxyborohydride or sodium cyanoborohydride in a solvent such as dichloroethane, methanol or dimethylformamide.
- the product VI can be deprotected to give the final compounds VII with trifluoroacetic acid in methylene chloride.
- the final product VII is isolated in the salt form, for example, as a trifluoroacetate, hydrochloride or acetate salt, among others.
- the product diamine VII can further be selectively protected to obtain VIII, which can
- the protected dipeptidyl analog intermediate can be reductively alkylated with other aldehydes such as 1 -trityl-4- carboxaldehyde or 1 -trityl-4-imidazolylacetaldehyde, to give products such as XII (Reaction Scheme K).
- the trityl protecting group can be removed from XII to give XIII, or alternatively, XII can first be treated with an alkyl halide then subsequently deprotected to give the alkylated imidazole XIV.
- the dipeptidyl analog intermediate can be acylated or sulfonylated by standard techniques.
- the imidazole acetic acid XV can be converted to the acetate XVII by standard procedures, and XVII can be first reacted with an alkyl halide, then treated with refluxing methanol to provide the regiospecifically alkylated imidazole acetic acid ester XVIII.
- Hydrolysis and reaction with the protected dipeptidyl analog intermediate in the presence of condensing reagents such as 1-(3-dimethylaminopropyl)-3- ethylcarbodiimide (EDC) leads to acylated products such as XIX.
- M may be employed using other peptidyl analog intermediates such as those whose synthesis is illustrated in Reaction Schemes B - l.
- the compounds of this invention inhibit Ras famesyl transferase which catalyzes the first step in the post-translational processing of Ras and the biosynthesis of functional Ras protein.
- These compounds are useful as pharmaceutical agents for mammals, especially for humans. These compounds may be administered to patients for use in the treatment of cancer. Examples of the type of cancer which may be treated with the compounds of this invention include, but are not limited to, colorectal carcinoma, exocrine
- pancreatic carcinoma pancreatic carcinoma, and myeloid leukemias.
- the compounds of this invention are also useful for inhibiting proliferative diseases, both benign and malignant, wherein Ras proteins are aberrantly activated as a result of oncogenic mutation in other genes (i.e., the Ras gene itself is not activated by mutation to an oncogenic form) with said inhibition being accomplished by the administration of an effective amount of the compounds of the invention to a mammal in need of such treatment.
- the benign proliferative disorder neurofibromatosis, or tumors in which the Ras is activated due to mutation or overexpression of tyrosine kinase oncogenes e.g., neu, src, abl, lck, and fyn
- arteriosclerosis and diabetic disturbance of blood vessels may be prevented or treated by use of the instant
- the compounds of this invention may be administered to mammals, preferably humans, either alone or, preferably, in
- the compounds can be administered orally or parenterally, including the intravenous, intramuscular, intraperitoneal, subcutaneous, rectal and topical routes of administration.
- the selected compound may be administered, for example, in the form of tablets or capsules, or as an aqueous solution or suspension.
- carriers which are commonly used include lactose and com starch, and lubricating agents, such as magnesium stearate, are commonly added.
- useful diluents include lactose and dried com starch.
- suspending agents are suspending agents. If desired, certain sweetening and/or flavoring agents may be added. For intramuscular, intraperitoneal,
- sterile solutions of the active ingredient are usually prepared, and the pH of the solutions should be suitably adjusted and buffered.
- the total concentration of solutes should be controlled in order to render the preparation isotonic.
- the present invention also encompasses a
- compositions useful in the treatment of cancer comprising the administration of a therapeutically effective amount of the compounds of this invention, with or without pharmaceutically acceptable carriers or diluents.
- Suitable compositions of this invention include aqueous solutions comprising compounds of this invention and pharmacologically acceptable carriers, e.g., saline, at a pH level, e.g., 7.4.
- the solutions may be introduced into a patient's intramuscular blood-stream by local bolus injection.
- the daily dosage will normally be determined by the prescribing physician with the dosage generally varying according to the age, weight, and response of the individual patient, as well as the severity of the patient's symptoms.
- a suitable amount of compound is administered to a mammal undergoing treatment for cancer.
- Administration occurs in an amount between about 0.1 mg/kg of body weight to about 20 mg/kg of body weight per day, preferably of between 0.5 mg/kg of body weight to about 10 mg/kg of body weight per day.
- the compounds of the instant invention are also useful as a component in an assay to rapidly determine the presence and quantity of farnesyl-protein transferase (FPTase) in a composition.
- FPTase farnesyl-protein transferase
- composition to be tested may be divided and the two
- mixtures which comprise a known substrate of FPTase (for example a tetrapeptide having a cysteine at the amine terminus) and famesyl pyrophosphate and, in one of the mixtures, a compound of the instant invention.
- FPTase for example a tetrapeptide having a cysteine at the amine terminus
- famesyl pyrophosphate for example a tetrapeptide having a cysteine at the amine terminus
- the chemical content of the assay mixtures may be determined by well known immunological, radiochemical or chromatographic techniques.
- compounds of the instant invention are selective inhibitors of FPTase, absence or quantitative reduction of the amount of substrate in the assay mixture without the compound of the instant invention relative to the presence of the unchanged substrate in the assay containing the instant compound is indicative of the presence of FPTase in the
- composition to be tested composition to be tested.
- potent inhibitor compounds of the instant invention may be used in an active site titration assay to determine the quantity of enzyme in the sample.
- a series of samples composed of aliquots of a tissue extract containing an unknown amount of famesyl-protein transferase, an excess amount of a known substrate of FPTase (for example a tetrapeptide having a cysteine at the amine terminus) and famesyl pyrophosphate are incubated for an appropriate period of time in the presence of varying concentrations of a compound of the instant invention.
- concentration of a sufficiently potent inhibitor i.e., one that has a Ki substantially smaller than the concentration of enzyme in the assay vessel
- concentration of a sufficiently potent inhibitor i.e., one that has a Ki substantially smaller than the concentration of enzyme in the assay vessel
- the standard workup referred to in the examples refers to solvent extraction and washing the organic solution with 10% citric acid, 10% sodium bicarbonate and brine as appropriate.
- Step B Preparation of 1 -(Phenylmethyl)-1H-imidazol-4-ylacetic acid methyl ester (2) and 1-(Phenylmethyl)-1H-imidazol-5- ylacetic acid methyl ester (3) (3:1 mixture)
- sodium hydride 37.3 mg, 1.56 mmol
- dimethylformamide 2 ml
- cannula a solution of 1 (1 15 mg, 0.707 mmol) in dimethylformamide (3 ml). This suspension was allowed to stir at 0°C for 15 min.
- Step C Preparation of 1-(Phenylmethyl)-1H-imidazol-4-ylacetic acid hydrochloride (4) and 1-(Phenylmethyl)-1H-imidazol- 5-ylacetic acid hydrochloride (5) (3: 1 mixture)
- Step D Preparation of N-(2(S)-(t-butoxycarbonylamino)-3(S)- methylpentyl)glycine methyl ester (6)
- Step E Preparation of N-[2(S)-(t-Butoxycarbonylamino)-3(S)- methylpentyn-N-(1 -naphthylmethyl)glycine methyl ester (7) N-[2(S)-(t-Butoxycarbonylamino)-3(S)-methyl-pentyl]- glycine methyl ester (6, 2.00 g, 6.97 mmol) was dissolved in 1,2- dichloroethane (56 ml) and 3A molecular sieves were added followed by 1 -naphthaldehyde (1.89 ml, 13.9 mmol) and sodium triacetoxy- borohydride (6.65 g, 31.4 mmol). The mixture was stirred at ambient temperature for 16 h, and filtered through glass fiber paper and
- Step G Preparation of N-[2(S)-(t-Butoxycarbonylamino)-3(S)- methylpentyl]-N-(1 -naphthylmethyl)glycine-methionine methyl ester (9)
- Step H Preparation of N-(2(S)-amino-3(S)-methylpentyl)-N-(1 - naphthylmethyl)-glycyl-methionine methyl ester hydrochloride (10) N-[2(S)-(t-Butoxycarbonylamino)-3(S)-methylpentyl]-N-(1 - naphthylmethyl)-glycyl-methionine methyl ester (9, 2.82 g, 5.04 mmol) was dissolved in EtOAc (50 mL) and cooled to -25°C. HCl was bubbled through the mixture until TLC (95:5 CH 2 CI 2 :MeOH) indicated complete reaction.
- Step I Preparation of N-[2(S)-(1-(Phenylmethyl)-1H-imidazol-4- ylacetyl)amino-3(S)-methylpentyl]-N-1-naphthylmethyl - gylycyl-methionine methyl ester bis trifluoroacetate (11) and
- the regioisomers were separated by Prep HPLC using a Nova Prep 5000 Semi preparative HPLC system and a Waters PrepPak cartridge (47 X 300mm, C18, 15 urn, , 100 A) eluting with 5 - 95% acetonitrile/water (0.1% TF A) at 100 ml/min (chromatography method A) to give after lyophilization pure 11 and 12.
- Step J Preparation of N-[2(S)-(1-(Phenylmethyl)-1H-imidazol-4- ylacetyl)amino-3(S)-methylpentyl]-N-1-naphthylmethyl - glycyl-methionine bis trifluoroacetate (13) and N-[2(S)-(1 - (Phenylmethyl)-1H-imidazol-5-ylacetyl)amino-3(S)- methylpentyl]-N-1-naphthylmethyl-glycyl-methionine bis trifluoroacetate (14) To a solution of N-[2(S)-(1-(Phenylmethyl)-1H-imidazol-4- ylacetyl)amino-3(S)-methylpentyl]-N-1-naphthylmethyl-glycyl- methionine methyl ester bis trifluor
- Step A Preparation of 1-(4-Nitrophenylmethyl)-1H-imidazol-4- ylacetic acid methyl ester (15) and 1 -(4-Nitrophenylmethyl)-
- Step B Preparation of 1-(4-Nitropheny Imethyl)-1 H-imidazol-4- ylacetic acid hydrochloride (17) and 1-(4-Nitrophenyl- methyl)-1H-imidazol-5-ylacetic acid (18) (3:1 mixture )
- Step C Preparation of N-[(2S)-(1-(4-Nitropheny Imethyl)-1H- imidazol-4-ylacetyl)amino-3(S)-methylpentyl]-N- 1 - naphthylmethyl-glycyl-methionine methyl ester bis trifluoroacetate (19) and N-[2(S)-(1-(4-Nitrophenyl-methyl)- 1 H-imidazol-5-ylacetyl)amino-3(S)-methylpentyl]-N- 1 - naphthylmethyl-glycyl-methionine methyl ester bis
- Step D Preparation of N-[2(S)-(1 -(4-Nitropheny Imethyl)-1 H- imidazol-4-ylacetyl)amino-3(S)-methylpentyl]-N-1- naphthylmethyl-glycyl-methionine bis trifluoroacetate (21)
- N-[2(S)-(1 -(4-nitrophenylmethyl)-1H- imidazol-4-ylacetyl)amino-3(S)-methylpentyl]-N-1-naphthylmethyl- glycyl-methionine methyl ester bis trifluoroacetate (19, 21 mg, 0.023 mmol) in methanol (1 ml ) at room temperature was added 1.0N lithium hydroxide (135 ⁇ l, 0.135 mmol).
- Step E Preparation of N-[2(S)-(1-(4-NitrophenylmethyI)-1H- imidazol-5-ylacetyl)amino-3(S)-methylpentyl]-N-1 - naphthylmethyl-glycyl-methionine bis trifluoroacetate (22)
- N- [2(S)-N'-(1 -(4-nitropheny Imethyl)-1 H- imidazol-5-ylacetyl)amino-3(S)-methylpentyl]-N-1-naphthylmethyl- glycyl-methionine methyl ester bis trifluoroacetate (20, 29 mg, 0.031 mmol) in methanol (1 ml ) was added 1.0N lithium hydroxide (187
- Step B Preparation of 1-(4-Nitrophenylmethyl)-1H-imidazol-5- ylacetic acid methyl ester (16)
- Step C Preparation of 1-(4-NitrophenyImethyl)-1H-imidazol-5 - ylacetic acid hydrochloride (18) 1-(4-Nitrophenylmethyl)-1H-imidazol-5-ylacetic acid methyl ester (0.115 g, 0.42 mmol ) was dissolved in 1.0N hydrochloric acid (10 ml ) and heated at 55°C for 3 h. The solution was evaporated in vacuo to give 18 as a white solid.
- Step D Preparation of N-[2(S)-(1-(4-Nitropheny Imethyl)-1H- imidazol-5-ylacetyl)amino-3(S)-methylpentyl]-N- 1 - naphthylmethyl-glycyl-methionine methyl ester bis trifluoroacetate (20)
- Step A Preparation of N-[2(S)-(1-(2-Naphthylmethyl)-1H-imidazol- 5-ylacetyl)amino-3(S)-methylpentyl]-N-1-naphthylmethyl- glycyl-methionine methyl ester bis trifluoroacetate
- Step B Preparation of N-[2(S)-(1-(2-Naphthylmethyl)-1H- imidazol-5-ylacetyl)amino-3(S)-methylpentyl]-N-1- naphthylmethyl-glycyl-methionine bis trifluoroacetate
- Step E but using the methyl ester prepared as described in Step A provided the titl e compound.
- Step A Preparation of N-[2( S)-(1-(1-Naphthylmethyl)-1H-imidazol- S-ylacetyl)ammo-3 -methylpentyl]-N-1-naphthylmethyl- glycyl-methionine methyl ester bis trifluoroacetate Following the procedure described in Example 3, Steps A-D, but using 1 -(bromomethyl)naphthlene in place of 4-nitrobenzylbromide provided the title compound.
- Step B Preparation of N-[2(S)-(1-(1-Naphthylmethyl)-1H-imidazol- 5-ylacetyl)amino-3(S)-methylpentyl]-N-1-naphthylmethyl- glycyl-methionine bis trifluoroacetate
- Step B Preparation of N-[2(S)-(1-(1-Farnesyl)-1H-imidazol-5- ylacetyl)amino-3(S)-methylpentyl]-N-1-naphthylmethyl - glycyl-methionine methyl ester bis trifluoroacetate
- Step C Preparation of N-[2(S)-[1-(1-Famesyl)-1H-imidazol-5- ylacetyl]amino-3(S)-methylpentyl]-N-1-naphthylmethyl - glycyl-methionine bis trifluoroacetate
- Step E but using the methyl ester prepared as described in Step B provided the title compound.
- Step A Preparation of N-[2(S)-(1-Geranyl-1H-imidazol-5- ylacetyl)amino-3(S)-methylpentyl]-N-1-naphthylmethyl - glycyl-methionine methyl ester bis trifluoroacetate
- Step B Preparation of N-[2(S)-(1-Geranyl-1H-imidazol-5- ylacetyl)amino-3(S)-methylpentyl]-N-1 -naphthylmethyl - glycyl-methionine bis trifluoroacetate
- Step A Preparation of 1-(4-Pyridylmethyl)-1H-imidazol-4-ylacetic acid methyl ester (24) and 1 -(4-PyridyImethyl)-1H-imidazol-
- Step B Preparation of N-[2(S)-(1-(4-Pyridylmethyl)-1H-imidazol-4- ylacetyl)amino-3(S)-methylpentyl]-N-1-naphthylmethyl- glycyl-methionine methyl ester tris trifluoroacetate (26) and N-[2(S)-(1-(4-Pyridylmethyl)-1H-imidazol-5- ylacetyl)amino-3(S)-methylpentyl]-N-1-naphthylmethyl- glycyl-methionine methyl ester tris trifluoroacetate (27) Following the procedure described in Example 2, Steps B-C, but using the mixture of pyridylmethylimidazolylacetic acid from Step A provided the title compounds after preparative HPLC.
- Step C Preparation of N-[2(S)-(1 -(4-Pyridylmethyl)-1H-imidazol-4- ylacetyl)amino-3(S)-methylpentyl]-N-1-naphthylmethyl- glycyl-methionine methyl ester tris trifluoroacetate (28) Following the procedure described in Example 2, Step D, but using the methyl ester 26 prepared as described in Step B provided the title compound.
- Step D Preparation of N-[2(S)--(1 -(4-PyridyImethyl)-1H-imidazol- 5-ylacetyl)amino-3(S)-methylpentyl]-N-1-naphthylmethyl- glycyl-methionine tris trifluoroacetate (29)
- Step A Preparation of N-[2(S)-(1-(4-Cyanophenylmethyl)- 1 H- imidazol-5-ylacetyl)amino-3(S)-methylpentyl]-N-1- naphthylmethyl-glycyl-methionine methyl ester bis trifluoroacetate
- Step B Preparation of N-[2(S)-(1-(4-Cyanophenylmethyl)-1H- imidazol-5-ylacetyl)amino-3(S)-methylpentyl]-N-1- naphthylmethyl-glycyl-methionine bis trifluoroacetate
- Step A Preparation of N-[2(S)-(1-(4-Methoxyphenylmethyl)-1H-imidazol-5- ylacetyl)amino-3(S)-methylpentyl]-N-1-naphthylmethyl-glycyl- methionine bis trifluoroacetate
- Step A Preparation of N-[2(S)-(1 -(4- Methoxyphenylmethyl)-1H- imidazol-5-yl)acetyl)amino-3(S)-methylpentyl]-N-1- naphthylmethyl-glycyl-methionine methyl ester bis trifluoroacetate
- Step B Preparation of N-[2(S)-(1-(4-Methoxyphenylmethyl)-1H- imidazol-5-ylacetyl)amino-3(S)-methylpentyl]-N-1- naphthylmethyl-glycyl-methionine bis trifluoroacetate
- Step A Preparation of N-[2(S)-(1-(4-Quinolinylmethyl)-1H-imidazol-5- ylacetyl)amino-3(S)-methylpentyl]-N-1-naphthylmethyl-glycyl- methionine bis trifluoroacetate
- Step A Preparation of N-[2(S)-(1-(4-Quinolinylmethyl)-1H- imidazol-5-ylacetyl)amino-3(S)-methylpentyl]-N-1- naphthylmethyl-glycyl-methionine methyl ester bis trifluoroacetate
- Step B Preparation of N-[2(S)-(1-(4-Quinolinylmethyl)-1H- imidazol-5-ylacetyl)amino-3(S)-methylpentyl]-N-1- naphthylmethyl-glycyl-methionine bis trifluoroacetate
- Step A Preparation of N-[2(S)-(1-(2-Naphthylmethyl)-1H-imidazol- 5-ylacetyl)amino-3(S)-memylpentyl]-N-1-phenylmethyl- glycyl-methionine methyl ester bis trifluoroacetate
- Step B Preparation of N-[2(S)-(1-(2-Naphthylmethyl)-1H-imidazol- 5-ylacetyl)amino-3(S)-methylpentyl]-N-1-phenylmethyl- glycyl-methionine bis trifluoroacetate
- Step B 1 -(2-Naphthylmethyl)-1H-imidazol-5-ylacetaldehyde (30)
- Step C Preparation of N-[2(S)-(1-(2-Naphthylmethyl)-1H-imidazol- 5-ylethyl)amino-3(S)-methylpentyl]-N-1-naphthylmethyl - glycyl-methionine methyl ester bis trifluoroacetate
- Step D Preparation of N-[2(S)-(1-(2-Naphthylmethyl)-1H-imidazol- 5-ylethyl)ammo-3(S)-methylpentyl]-N-1-naphthylmethyl- glycyl-methionine bis trifluoroacetate
- Step C Preparation of N-(tert-butoxycarbonyl)-5(S)-[1(S)- methyl]propyl-2,3,5,6-tetrahydro-4H-1,4-oxazin-3-one.
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- Proteomics, Peptides & Aminoacids (AREA)
- Animal Behavior & Ethology (AREA)
- Molecular Biology (AREA)
- Public Health (AREA)
- Veterinary Medicine (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Biophysics (AREA)
- Genetics & Genomics (AREA)
- Engineering & Computer Science (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Crystallography & Structural Chemistry (AREA)
- Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
- Acyclic And Carbocyclic Compounds In Medicinal Compositions (AREA)
- Medicines That Contain Protein Lipid Enzymes And Other Medicines (AREA)
- Peptides Or Proteins (AREA)
Abstract
Priority Applications (4)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
EP95935104A EP0783517A2 (fr) | 1994-09-29 | 1995-09-26 | Inhibiteurs de la transferase de proteines farnesylees exempts de thiol |
CA 2201348 CA2201348A1 (fr) | 1994-09-29 | 1995-09-26 | Inhibiteurs de la transferase de proteines farnesylees exempts de thiol |
AU37248/95A AU700175B2 (en) | 1994-09-29 | 1995-09-26 | Thiol-free inhibitors of farnesyl-protein transferase |
JP8511933A JPH10508005A (ja) | 1994-09-29 | 1995-09-26 | チオールを有しないファルネシル−タンパク質トランスフェラーゼ阻害剤 |
Applications Claiming Priority (4)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US526,244 | 1990-05-18 | ||
US31497494A | 1994-09-29 | 1994-09-29 | |
US314,974 | 1994-09-29 | ||
US08/526,244 US5652257A (en) | 1994-09-29 | 1995-09-21 | Heterocycle-containing inhibitors of farnesyl-protein transferase |
Publications (2)
Publication Number | Publication Date |
---|---|
WO1996010034A2 true WO1996010034A2 (fr) | 1996-04-04 |
WO1996010034A3 WO1996010034A3 (fr) | 1996-05-09 |
Family
ID=26979651
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
PCT/US1995/012224 WO1996010034A2 (fr) | 1994-09-29 | 1995-09-26 | Inhibiteurs de la transferase de proteines farnesylees exempts de thiol |
Country Status (5)
Country | Link |
---|---|
EP (1) | EP0783517A2 (fr) |
JP (1) | JPH10508005A (fr) |
AU (1) | AU700175B2 (fr) |
IL (1) | IL115471A0 (fr) |
WO (1) | WO1996010034A2 (fr) |
Cited By (13)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP0880320A4 (fr) * | 1996-01-30 | 1999-06-16 | Merck & Co Inc | Inhibiteurs de la farnesyl-proteine transferase |
US5932590A (en) * | 1996-12-05 | 1999-08-03 | Merck & Co., Inc. | Inhibitors of farnesyl-protein transferase |
EP0904080A4 (fr) * | 1996-04-03 | 2001-08-01 | Merck & Co Inc | Inhibiteurs de farnesyle-proteine transferase |
EP0891353A4 (fr) * | 1996-04-03 | 2001-08-08 | Merck & Co Inc | Inhibiteurs de farnesyle-proteine transferase |
EP0891352A4 (fr) * | 1996-04-03 | 2001-08-16 | Merck & Co Inc | Inhibiteurs de la farnesyl-proteine transferase |
EP0944388A4 (fr) * | 1996-04-03 | 2001-08-16 | Merck & Co Inc | Inhibiteurs de la farnesyl-proteine transferase |
EP0891335A4 (fr) * | 1996-04-03 | 2001-08-16 | Merck & Co Inc | Inhibiteurs de transferase de farnesyl-proteine |
EP1507549A4 (fr) * | 2002-05-14 | 2009-07-01 | Univ Leland Stanford Junior | Pharmacotherapie destinee a une maladie coeliaque |
US7776545B2 (en) | 2002-11-20 | 2010-08-17 | The Board Of Trustees Of The Leland Stanford Junior University | Diagnostic method for Celiac Sprue |
US7910541B2 (en) | 2002-02-14 | 2011-03-22 | The Board Of Trustees Of The Leland Stanford Junior University | Enzyme treatment of foodstuffs for celiac sprue |
US8143210B2 (en) | 2002-02-14 | 2012-03-27 | The Board Of Trustees Of The Leland Stanford Junior University | Enzyme treatment of foodstuffs for celiac sprue |
US8153593B2 (en) | 2003-11-18 | 2012-04-10 | The Board Of Trustees Of The Leland Stanford Junior University | Transglutaminase inhibitors and methods of use thereof |
US8778338B2 (en) | 2007-03-16 | 2014-07-15 | The Board Of Trustees Of The Leland Stanford Junior University | Combination enzyme therapy for digestion of dietary gluten |
Family Cites Families (3)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US5141851A (en) * | 1990-04-18 | 1992-08-25 | Board Of Regents, The University Of Texas System | Isolated farnesyl protein transferase enzyme |
US5468733A (en) * | 1993-09-30 | 1995-11-21 | Merck & Co., Inc. | Inhibitors of farnesyl-protein transferase |
KR100362338B1 (ko) * | 1993-11-05 | 2003-04-08 | 워너-램버트 캄파니 | 단백질:파르네실트랜스퍼라아제의치환디-및트리펩티드억제제 |
-
1995
- 1995-09-26 EP EP95935104A patent/EP0783517A2/fr not_active Withdrawn
- 1995-09-26 WO PCT/US1995/012224 patent/WO1996010034A2/fr not_active Application Discontinuation
- 1995-09-26 AU AU37248/95A patent/AU700175B2/en not_active Ceased
- 1995-09-26 JP JP8511933A patent/JPH10508005A/ja active Pending
- 1995-09-29 IL IL11547195A patent/IL115471A0/xx unknown
Cited By (22)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP0880320A4 (fr) * | 1996-01-30 | 1999-06-16 | Merck & Co Inc | Inhibiteurs de la farnesyl-proteine transferase |
EP0904080A4 (fr) * | 1996-04-03 | 2001-08-01 | Merck & Co Inc | Inhibiteurs de farnesyle-proteine transferase |
EP0891353A4 (fr) * | 1996-04-03 | 2001-08-08 | Merck & Co Inc | Inhibiteurs de farnesyle-proteine transferase |
EP0891352A4 (fr) * | 1996-04-03 | 2001-08-16 | Merck & Co Inc | Inhibiteurs de la farnesyl-proteine transferase |
EP0944388A4 (fr) * | 1996-04-03 | 2001-08-16 | Merck & Co Inc | Inhibiteurs de la farnesyl-proteine transferase |
EP0891335A4 (fr) * | 1996-04-03 | 2001-08-16 | Merck & Co Inc | Inhibiteurs de transferase de farnesyl-proteine |
US5932590A (en) * | 1996-12-05 | 1999-08-03 | Merck & Co., Inc. | Inhibitors of farnesyl-protein transferase |
US7923532B2 (en) | 2002-02-14 | 2011-04-12 | The Board Of Trustees Of The Leland Stanford Junior University | Methods for diagnosing celiac sprue and reagents useful therein |
US8143210B2 (en) | 2002-02-14 | 2012-03-27 | The Board Of Trustees Of The Leland Stanford Junior University | Enzyme treatment of foodstuffs for celiac sprue |
US7910541B2 (en) | 2002-02-14 | 2011-03-22 | The Board Of Trustees Of The Leland Stanford Junior University | Enzyme treatment of foodstuffs for celiac sprue |
US8962545B2 (en) | 2002-02-14 | 2015-02-24 | The Board Of Trustees Of The Leland Stanford Junior University | Enzyme treatment of foodstuffs for celiac sprue |
US7928056B2 (en) | 2002-02-14 | 2011-04-19 | The Board Of Trustees Of The Leland Stanford Junior University | Enzyme treatment of foodstuffs for Celiac Sprue |
US7943312B2 (en) | 2002-02-14 | 2011-05-17 | The Board Of Trustees Of The Leland Stanford Junior University | Enzyme treatment of foodstuffs for celiac sprue |
US8796201B2 (en) | 2002-02-14 | 2014-08-05 | The Board Of Trustees Of The Leland Stanford Junior University | Enzyme treatment of foodstuffs for celiac sprue |
EP1507549A4 (fr) * | 2002-05-14 | 2009-07-01 | Univ Leland Stanford Junior | Pharmacotherapie destinee a une maladie coeliaque |
US7776545B2 (en) | 2002-11-20 | 2010-08-17 | The Board Of Trustees Of The Leland Stanford Junior University | Diagnostic method for Celiac Sprue |
US8426145B2 (en) | 2002-11-20 | 2013-04-23 | The Board Of Trustees Of The Leland Stanford Junior University | Diagnostic method for celiac sprue |
US8071316B2 (en) | 2002-11-20 | 2011-12-06 | The Board Of Trustees Of The Leland Stanford Junior University | Diagnostic method for celiac sprue |
US8153593B2 (en) | 2003-11-18 | 2012-04-10 | The Board Of Trustees Of The Leland Stanford Junior University | Transglutaminase inhibitors and methods of use thereof |
US8470782B2 (en) | 2005-08-26 | 2013-06-25 | The Board Of Trustees Of The Leland Stanford Junior University | Transglutaminase inhibitors and methods of use thereof |
US8871718B2 (en) | 2005-08-26 | 2014-10-28 | The Board Of Trustees Of The Leland Stanford Junior University | Transglutaminase inhibitors and methods of use thereof |
US8778338B2 (en) | 2007-03-16 | 2014-07-15 | The Board Of Trustees Of The Leland Stanford Junior University | Combination enzyme therapy for digestion of dietary gluten |
Also Published As
Publication number | Publication date |
---|---|
AU700175B2 (en) | 1998-12-24 |
JPH10508005A (ja) | 1998-08-04 |
AU3724895A (en) | 1996-04-19 |
WO1996010034A3 (fr) | 1996-05-09 |
IL115471A0 (en) | 1995-12-31 |
EP0783517A2 (fr) | 1997-07-16 |
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