WO1994018959A1 - Calcium receptor-active molecules - Google Patents
Calcium receptor-active molecules Download PDFInfo
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- WO1994018959A1 WO1994018959A1 PCT/US1993/001642 US9301642W WO9418959A1 WO 1994018959 A1 WO1994018959 A1 WO 1994018959A1 US 9301642 W US9301642 W US 9301642W WO 9418959 A1 WO9418959 A1 WO 9418959A1
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- A61K31/40—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having five-membered rings with one nitrogen as the only ring hetero atom, e.g. sulpiride, succinimide, tolmetin, buflomedil
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- A61K31/435—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with one nitrogen as the only ring hetero atom
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- A61K31/55—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having seven-membered rings, e.g. azelastine, pentylenetetrazole
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Definitions
- This invention relates to the design, development, composition and use of novel calcimimetic molecules able to act in a manner analogous to extracellular calcium ions on cells, to calcilytic molecules which block the activity of extracellular calcium ions on cells, and to methods for their use and identification.
- inorganic-ion receptors which includes, among others, calcium receptors, nucleic acids encoding such receptors, cells, tissues and animals containing such nucleic acids, antibodies to
- receptors assays utilizing receptors, and methods relating to all of the foregoing.
- PTH parathyroid hormone
- PTH secretion forms the essential mechanism maintaining bodily Ca 2+ homeostasis.
- Extracellular Ca 2+ acts directly on the parathy roid cell to regulate PTH secretion.
- the existence of a parathyroid cell surface protein which detects changes in [Ca 2+ ] has been suggested. This protein acts as a
- the Ca 2+ receptor for extracellular Ca 2+
- Ca 2+ m the regulation of intracellular Ca 2+ and cell function is reviewed in Nemeth et al., 11 Cell Calcium 319, 1990; the role of Ca 2+ receptors m parafollicular and parathyroid cells is discussed in Nemeth, 11 Cell Calcium 323, 1990; and the role of Ca 2+ receptors on bone
- osteoclast in bone the juxtaglomerular, proximal tubule cells in the kidney, the keratinocyte in the epidermis, the parafollicular cell in the thyroid, intestinal cells the trophoblast in the placenta, have the capacity to sense changes in [Ca 2+ ]. It has been suggested that cell
- Ca 2+ receptors may also be present on these cells, imparting to them the ability to detect and to initiate or enable a response to changes in [Ca 2+ ].
- Such an increase may be caused by influx of extracellular Ca 2+ or by mobi.li.zation of Ca 2+ from mtracellular
- IP 3 inositol-1,4,5-trisphosphate
- diacylglycerol two biochemical indicators which are associated with receptor-dependent mobilization
- trivalent cations such as Mg 2+ , Sr 2+ , Ba 2+ , La 3+ ,
- the postulated Ca 2+ receptor on the parathyroid cell is therefore promiscuous because it detects a variety of extracellular di- and trivalent cations.
- polyvalent cation receptor may be coupled to inhibition of adenylate cyclase by the inhibitory guanine nucleotide regulatory (G) protein, G i .
- G inhibitory guanine nucleotide regulatory
- polycationic antibiotic mimics the actions of di- and trivalent cations in several aspects of parathy roid function.
- neomycin mimics the actions of di- and trivalent cations in several aspects of parathy roid function.
- the Ca 2+ receptor has been presumed to be analogous to other G protein-coupled receptors [e.g., a glycoprotein], but recent studies with other cell types have raised the possibility that polycations can
- mast cells for example, a variety of amphipathic cations, including mastoparan, a peptide from wasp venom, 48/80, a synthetic polycation, and polylysine, enhance secretion by a pertussis toxin-sensitive mechanism, suggesting the involvement of a G protein.
- amphipathic cations including mastoparan, a peptide from wasp venom, 48/80, a synthetic polycation, and polylysine, enhance secretion by a pertussis toxin-sensitive mechanism, suggesting the involvement of a G protein.
- No classic cell surface receptor has been identified that could mediate the actions of these diverse agents.
- these same compounds have been shown to activate directly
- Polylysines of varying chain lengths (20-1000 amino acids) bind to artificial phospholipid vesi cles with dissociation constants in the range of
- the binding affinity is directly related to the length of the polylysine chain, with polymers of 1000 amino acids having a K d of 0.5 nM, shorter polymers having higher Kd values, and lysine not interacting to a significant extent. This relationship between potency and chain length is similar to that observed for the effects of polylysine 10, 200' polylysine 3800' and lysine on parathyroid function.
- parathyroid cells could involve a
- Ca 2+ receptor proteins enable certain specialized cells involved in bodily Ca 2+ metabolism to detect and respond to changes in the concentration of extracellular Ca 2+ .
- receptors share certain general characteristics, they can be selectively affected by different pharmacological agents.
- Ca 2+ receptors constitute discrete molecular targets for a new class of molecules that mimic
- Such receptors may include a free or bound effector mechanism, as defined by Cooper, Bloom and Roth, "The Biochemical Basis of
- Such receptors are thus distinct from mtracellular Ca 2+ receptors, e.g., calmodulin ainndd the troponins.
- Calcimimetics for example, act on Ca 2+ receptors selectively to directly or indirectly depress the function of parathyroid cells or osteoclasts or to stimulate the function of C-cells. Calcimimetics and calcilytics of this invention allow novel therapies for
- This application concerns in one aspect targeting Ca 2+ receptors on each of these three cell types and other cell types that detect and respond to changes in [Ca 2+ ].
- Applicant ls the first to demonstrate a Ca 2+ receptor protein in parathyroid cells, and to pharmacologically differentiate such Ca 2+ receptors in other
- Such calcimimetics or calcilytics are useful in the treatment of various disease states characterized by abnormal levels of one or more components, e.g., polypeptides such as hormones, enzymes or growth factors, the expression and/or secretion of which is regulated or affected by activity at one or more Ca 2+ receptors.
- polypeptides such as hormones, enzymes or growth factors
- the expression and/or secretion of which is regulated or affected by activity at one or more Ca 2+ receptors.
- the identification of different Ca 2+ receptors in different cell types, and the specific response of such receptors to different lead molecules allows design and construction of specific molecules active in treatment of specific diseases which can be affected by action at such specific Ca 2+ receptors.
- abnormal levels of parathyroid hormone secretion can be affected by such specific molecules without affecting the lleevveell ooff secretion of other Ca 2+ regulated hormones and the like.
- Cloning of the parathyroid cell Ca 2+ receptor and functionally related receptors enables development of transfected cell lines suitable for high-throughput screening of natural product or molecule libraries and synthetic molecules. This, together with structure-activity studies discussed below, provides the technology necessary to develop novel calcimimetics and calcilytics.
- a bovine parathyroid cell calcium receptor cDNA has been cloned and is deposited in the ATCC under accession number ATCC 75416. Using this clone,
- the human parathyroid cell Ca 2+ receptor cDNA can be cloned by screening nucleic acid libraries or by screening for functional expression in
- Xenopus oocytes and the structural features of organic molecules necessary for activity on the Ca 2+ receptor can be determined through the testing of selected natural products or other molecule libraries and subsequent
- the invention features a pharmaceutical composition including a molecule which either mimics the activity of extracellular Ca 2+ by evoking an increase in [Ca 2+ ] i in a cell, or blocks an increase in
- the molecule has an EC 50 of less than or equal to 5 ⁇ M, and is not protamine.
- mic is meant that the molecule has one or more of the specific actions of extracellular Ca 2+ on an extracellular Ca 2+ responsive cell. The term does not require that all of the biological functions of
- extracellular Ca 2+ are mimicked, but rather that at least one such function is mimicked.
- EC 50 can be determined in assays as described below, where the activity mimicked is measured and the concentration of molecule which mimics at half the maximum mimicking effect is the EC 50 .
- the IC 50 of a calcilytic is that amount which blocks half maximal activity.
- such assays measure [Ca 2+ ] i increases and are confirmed to be specific to a Ca 2+ receptor by methods described below, or their equivalent.
- bioassays described herein demonstrate that the increase in [Ca 2+ ] i in a cell is transient, having a duration of less than one minute, and the increase in [Ca 2+ ] i is rapid, occurring within thirty seconds; and the molecule also (a) evokes a sus tained increase (greater than thirty seconds) in
- inositol-1,4,5-trisphosphate and/or diacylglycerol levels e.g., within less than 60 seconds, and (c) inhibits
- PMA phorbol myristate acetate
- those molecules which are active in all of the assays described above are particularly useful in this invention since they are specific in their actions to a Ca 2+ receptor of such a cell. This is
- the cell is a parathyroid cell, and the molecule inhibits parathyroid hormone secretion from the cell.
- the cell is a parathyroid cell, and the molecule inhibits parathyroid hormone secretion from the cell.
- embodiments include molecules that elicit an increase in [Ca 2+ ] i as detected, for example, as an increase in
- the molecule evokes the mobilization of mtracellular Ca 2+ to cause the increase in [Ca 2+ ] i ;
- the cell is a C-cell or an
- the osteoclast and the molecule inhibits bone resorption in vivo;
- the cell is an osteoclast and the molecule inhibits bone resorption in vitro; or the cell is a C- cell and the molecule stimulates calcitonin secretion in vitro or in vivo; and most preferably the molecule is either a
- calcimimetic or calcilytic having an EC 50 or IC 50 at a Ca 2+ receptor of less than or equal to 5 ⁇ M, and even more preferably less than or equal to 1 ⁇ M, 100 nmolar,
- EC 50 's and IC 50 's enables the design and synthesis of similarly potent and efficacious molecules.
- calcimimetic molecule is meant any molecule which has one or more activities of extracellular Ca 2+ , and preferably mimics the activity of Ca 2+ at a Ca 2+ receptor.
- calcimimetic molecule which has one or more activities of extracellular Ca 2+ , and preferably mimics the activity of Ca 2+ at a Ca 2+ receptor.
- parathyroid cell it is a molecule which, when tested on parathyroid cells in vitro, possesses one or more, and preferably all of the following characteristics as measured by techniques well known to those in the art:
- the molecule causes a rapid (time to peak ⁇ 5 sec) and transient increase in [Ca 2+ ] i that is
- the molecule potentiates increases in
- the transient increase in [Ca 2+ ] i caused by the molecule is diminished by pretreatment with an activator of protein kinase C (PKC), such as phorbol
- the molecule causes a rapid ( ⁇ 30 sec.) increase in the formation of inositol-1,4,5- trisphosphate and or diacylglycerol;
- the molecule inhibits dopamine- or isopronic acid-stimulated cyclic AMP formation
- the molecule elicits increases in [Ca 2+ ]. as detected, for example, as an increase in Cl- current in Xenopus oocytes injected with poly(A) + - enriched mRNA from bovine or human parathyroid cells but is without effect in Xenopus oocytes injected with water or rat brain or liver mRNA; and
- the molecule will elicit a response in Xenopus oocytes injected with the specific cDNA, mRNA or synthetic sense RNA (cRNA) encoding the receptor.
- cRNA synthetic sense RNA
- calcilytic molecule which blocks one or more of the activities of extracellular Ca 2+ on an extracellular Ca 2+ -sensing cell, preferably by acting as an antagonist at the Ca 2+ receptor.
- a parathyroid cell it is a molecule which, when tested on parathyroid cells in vitro, possesses one or more, and preferably all of the following characteristics as measured by techniques well known to those in the art:
- the molecule blocks, either partially or completely, the ability of increased concentrations of extracellular Ca 2+ to:
- the molecule blocks increases in Cl- current in Xenopus oocytes injected with poly(A) + - mRNA from bovine or human parathyroid cells elicited by
- Xenopus oocytes injected with water or rat brain or liver mRNA
- Xenopus oocytes injected with the specific cDNA, mRNA or cRNA encoding the Ca 2+ receptor, elicited by extracellular Ca 2+ or a calcimimetic compound.
- the Ca 2+ receptor ls able to detect and respond to certain inorganic polycations and polycationic organic molecules.
- the parathyroid cell is unable to distinguish increases in extracellular Ca 2+ concentration from the addition of these organic polycations, presumably because these organic molecules act just like extracellular Ca 2+ at the Ca 2+ receptor.
- the calcimimetic molecules of this invention are particularly good agonists of the Ca 2+ receptor and may be used as drugs that alter selected cellular functions, e.g., secretion of PTH from parathyroid cells. Unlike Ca most of these molecules act only at one or more, but not all Ca 2+ receptors, and thus provide an ability to specifically target one Ca 2+ receptor.
- [Ca 2+ ] play a role, such as hyperparathyroidism
- osteoporosis Paget's disease, hypertension, renal disease, skin disease, cardiovascular disease, blood clotting disorders, gastorintestinal diseases, endocrine diseases, abnormalities in water metabolism and cancer.
- the calcimimetics and calcilytics can be formu lated as pharmaceutical compositions which are useful for regulatmg the level of extracellular free Ca 2+ in a patient and for mimicking the effect of extracellular Ca 2+ on a cell selected from the group described above, by administering to the patient such a pharmaceutical
- the molecule has an EC 50 less than or equal to 5 ⁇ M at one or more but not all cells chosen from the group consisting of parathyroid cells, bone osteoclasts, juxtaglomerular kidney cells, proximal tubule kidney cells, distal tubule kidney cell, cell of the thick ascending limb of Henle's loop and/or collecting duct, keratinocyte in the epidermis, parafollicular cell in the thyroid (C-cells), intestinal cell, trophoblast in the placenta, platelet, vascular smooth muscle cell, cardiac atrial cell, gastrin and glucagon secreting cells, kidney mesangial cell and mammary cell.
- the molecule is positively charged at physiological pH, and is selected from the group consisting of branched or cyclic polyamines, positively charged polyamino acids, and arylalkylamines, e.g., the branched polyamine has the formula
- each j is the same or different and is an integer from 2 to 20, and each R i is the same or
- the molecule has the formula where each X independently is selected from the group consisting of H, CH 3 , CH 3 O, CH 3 CH 2 O, Br, Cl, F,
- Ar is a hydrophobic entity
- R independently is selected from the group consisting of hydrogen, methyl, ethyl, propyl, isopropyl, butyl, isobutyl, cyclopentyl, cyclohexyl, cycloheptyl, cyclooctyl, indenyl, indanyl, dihydroindolyl, thiodihydroindolyl, 2-, 3-, or 4- piperid(in)yl; Y is selected from the group consisting of CH, nitrogen and an unsaturated carbon; Z is selected from the group consisting of oxygen, nitrogen, sulfur.
- each n is independently between 1 and 4 inclusive, and each m is independently between 0 and 5 inclusive.
- the molecule is either a calcimimetic or calcilytic
- the hydrophobic entity is selected from the group consisting of phenyl, 2-, 3-, or
- R-phenylpropyl- ⁇ -phenethylamine derivative and the molecule has the formula:
- each X preferably being independently selected from the group consisting of Cl, F, CF 3 , CH 3 , and CH 3 O.
- novel phenylpropyl- ⁇ -phenethylamine analogs and derivatives having the formula:
- alk is straight or branched chain alkylene of from 1 to 6 carbon atoms
- R 1 is lower alkyl of from 1 to 3 carbon atoms or lower haloalky
- R and R are independently selected carbocyclic a ryl or cycloalkyl groups, either monocyclic or bicyclic, having
- Suitable carbocyclic aryl groups are groups having one or two rings, at least one of which having aromatic character and include carbocyclic aryl groups such as phenyl and bicyclic carbocyclic aryl groups such as naphthyl.
- R-phenylpropyl ⁇ -phenethylamine derivatives which exhibit enhanced activity in lowering serum ionized calcium.
- Preferred compounds include those where alk is n-propylene. Also preferred are compounds where R 1 is methyl. Also preferred are those compounds where R 2 and
- R 3 are optionally substituted phenyl.
- Especially preferred compounds include those where R 2 is monosubstituted phenyl, more preferably
- R 3 groups include unsubstituted or monosubstituted phenyl, especially
- Preferred substitutents for R 2 include halogen, haloalkyl, preferably trihalomethyl, and alkoxy, preferably methoxy.
- Preferred substituents for R 3 include halogen, preferably chlorine.
- the invention fea tures a method for treating a patient having a disease or condition characterized by an abnormal [Ca 2+ ] or [Ca 2+ ] i in one or more cells or in the blood or plasma or extracellular fluids.
- the method includes the step of administering to the patient a therapeutically effective amount of a molecule which either mimics the activity of extracellular Ca 2+ by evoking an increase in [Ca 2+ ] i in a cell or blocks an increase in
- abnormal is meant that the patient, compared to the general population, has a different Ca 2+ metabolism that is affected by one or more proteins (e.g., hormones) in the blood or extracellular body fluids, or other molecules which affect the level of extracellular and/or mtracellular
- proteins e.g., hormones
- the diseases include hyperparathyroidism, osteoporosis and other bone and mineral-related disorders, and the like (as described, e.g., in standard medical text books, such as "Harrison's Principles of Internal Medicine”).
- Such diseases are treated in this invention by molecules which mimic or block one or more of the effects of Ca 2+ and thereby directly or indirectly affect the levels of the proteins or other molecules in the body of the patient.
- terapéuticaally effective amount is meant an amount that relieves to some extent one or more symptoms of the disease or condition in the patient. Additionally, by “therapeutically effective amount” is meant an amount that returns to normal, either partially or completely,
- physiological or biochemical parameters associated with or causative of the disease or condition Generally, it is an amount between about 1 nmole and 1 ⁇ mole of the molecule, dependent on its EC 50 and on the age, size, and disease associated with the patient.
- the molecule has an EC 50 of less than or equal to 5 ⁇ M, and is not protamine; and most preferably mteracts at a Ca 2+ receptor as a
- calcimimetic or calcilytic Most preferably the molecule is chosen from one of those described above.
- the patient has a disease characterized by an abnormal level of one or more components the level of which is regulated or affected by activity of one or more Ca 2+ receptors, and the molecule ls active on a Ca 2+ receptor of a cell selected from the group consisting of parathyroid cells, bone osteoclasts,
- the mole cule reduces the level of parathyroid hormone in the serum of the patient, e.g., to that level present in a normal individual, or to a degree sufficient to cause a decrease in plasma
- the invention features a method for diagnosis of a disease or condition in a patient by identifying the number and/or location (and/or functional mtegrity) of one or more Ca 2+ receptors within the patient and comparing that number and/or location (and/or functional integrity) with that observed in normal patients as an
- the method is an lmmunoassay m which an antibody to a Ca 2+ receptor ls used to identify the number and/or location and/or functional mtegrity of the Ca 2+ receptors, or the assay involves
- a labelled calcimimetic or calcilytic molecule which binds to a Ca 2+ receptor
- the disease diagnosed is a cancer, e.g., an ectopic tumor of the parathyroid, or a condition characterized by an above normal level in the number of osteoclasts in bone or an increased level of activity of osteoclasts in bone.
- the invention features a method for identifying a molecule useful as a therapeutic molecule.
- the method includes screening a potentially useful molecule for either an ability to mimic the activity of extracellular Ca 2+ in a cell, or to block an increase in [Ca 2+ ] i
- the invention features a
- recombinant Ca 2+ receptor a cell including a recombinant Ca 2+ receptor, purified nuclei.c aci.d encoding a Ca 2+
- NPS 467, and NPS 568 (see Fig. 36) and a method for
- identifying a useful calcimimetic or calcilytic molecule by identifying a molecule which mimics or blocks one or more activities of Ca 2+ at a first Ca 2+ receptor but not at a second Ca 2+ receptor, e.g., by use of a recombinant Ca 2+ receptor.
- a cell including a recombinant Ca 2+ receptor(s) from kidney ls employed as a test system to screen antibiotics (e.g. aminoglycoside antibiotics) for activity at calcium receptors which produces renal toxicity in humans.
- antibiotics e.g. aminoglycoside antibiotics
- recombinant meant to include any Ca 2+ receptor produced by recombinant DNA techniques such that it ⁇ s distinct from the naturally occurring Ca 2+ receptor
- purified is meant that the antibody or nucleic acid is distinct from naturally occurring antibody or nucleic acid, being separated from antibody or nucleic acid with which it naturally occurs, e.g., in a vector system, such that it can be used to express recombinant Ca 2+ receptor.
- the antibody or nucleic acid is provided as a homogeneous preparation by standard techniques.
- Such cloned receptors can be expressed in a desired cell, and isolated and crystallized to allow structure
- receptor in addition, equivalent such receptors can be cloned using a first clone as a probe for clones in other cell, cDNA or genomic libraries.
- Antibodies to the cloned receptor can be isolated and used as therapeutics in this invention, or as diagnostic tools for determining Ca 2+ receptor numbers and/or locations and/or functional integrity to diagnose Ca 2+ -related
- Such antibodies can also be used in vivo by intravenous administration as calcimimetics or
- calcimimetic or calcilytic molecules able to act as either selective agonists or antagonists respectively at a Ca 2+ receptor of one or more but not all cells chosen from the group consisting of parathyroid cells, bone osteoclasts, juxtaglomerular kidney cells, proximal tubule kidney cells, distal tubule kidney cell, cell of the thick ascending limb of
- Such a composition may include any pharmaceutically acceptable carrier known to those in the art to provide a pharmaceutical composition.
- the invention also features modulation of the number of Ca 2+ receptors in a patient by standard techniques, e.g., antisense and related technologies (e.g., ribozymes), as a therapeutic for a disease state.
- standard techniques e.g., antisense and related technologies (e.g., ribozymes)
- ribozymes e.g., ribozymes
- This invention provides methods for identifying molecules which affect the activity of a Ca 2+ receptor using assays, as defined below, to detect calcimimetics and/or calcilytics. Further, molecules found to be effective to reduce or enhance expression of Ca 2+ receptor at a
- transcriptional or translational level by use of the assays or antibodies or other techniques described below can be defined for therapeutic uses.
- the invention relates to a novel superfamily of polypeptide receptor/sensor
- BoPCaR 1 The cDNA clone, BoPCaR 1, disclosed herein and duly deposited, represents the first such clone described to encode a receptor/sensor which is a member of this
- receptor/sensors belonging to this superfamily are called inorganic-ion receptors.
- novel superfamily of inorganic ion receptors includes a variety of such molecules which are related to each other by similarity of amino acid sequence, by structure and/or by function. In total, these attributes also
- receptors or changes in ionic transmembrane ion flux or the like.
- Other members of this superfamily also exist which sense inorganic anions such as phosphate or chloride ions. All such receptors are within the scope of the current
- the invention features the therapeutic use of any such natural or synthetic ligands for inorganic-ion receptors.
- receptors belonging to the superfamily of inorganic-ion receptors may be activated by stimuli other than ligand binding.
- some members of this superfamily of receptors are activated by physical forces such as stretch forces acting on membranes of cells expressing such
- the inorganic-ion receptors can be used in the manner as described above in connection with the preferred receptor.
- Recombinant receptors expressed in a variety of tissue types including human tissue types can be used to screen (including high through-put screens) for drug discovery in methods known to those skilled in the art. Ionmimetics and ionlytics can be readily identified. The procedures can be adapted for the individual function of the receptor.
- calcium activated chloride current may be employed with an inorganic-ion receptor which forms a calcium channel or which nutrilizes mtracellular calcium.
- Ligand-gated ion channels are known in the art.
- Inorganic-ion receptors that couple to second messenger systems permit assays as described above, including measurement of cyclic AMP and inositol phosphates.
- Cells that have recombinant receptors coupled to readily detectable agents also may be used such as G-protein coupling of receptors to pigment dispersion in melanophores as described in the literature.
- the invention fully enables methods for discovering agents that are inorganic-ion receptor mimetics or lytics, as well as such mimetics and lytics themselves, including those preferably selected from the mimetics and lytics described in detail above.
- the invention embraces diagnosis and treatment of
- inorganic-ion receptor related diseases or conditions as described above in connection with the preferred embodiment.
- diseases associated with elevated levels of an inorganic-ion receptor can be diagnosed based upon assays for such elevated levels.
- Therapeutic molecules can be identified by screening for agents that mimic the activity of the
- Tissue specific expression as well as levels of expression can be evaluated and the like.
- a novel superfamily of isolated inorganic-ion receptors is provided and unique fragments thereof also are provided.
- the isolated receptors are human receptors, and most
- the isolated receptor is a calcium receptor
- the invention further features polypeptide fragments of the foregoing inorganic-ion receptors which have desirable activity.
- the fragment may include just a binding site, or a site which binds to mimics, agonists or antagonists.
- Other useful fragments include those that have only the external portion, membrane-spanning portions, or mtracellular portion of the receptor.
- these fragments are useful for forming chimeric receptors with fragments of other receptors, as described in greater detail below.
- the invention embraces not only naturally occurring proteins, but derivatives thereof.
- the invention also features nucleotide sequences encoding the foregoing inorganic-ion receptors and fragments and derivatives thereof.
- nucleotide sequences may be obtained through a variety of procedures, and the disclosure of the present invention allows one of ordinary skill in the art to obtain cDNA or genomic clones encoding such receptors.
- hybridization probes may be made based upon the nucleotide sequence of BoPCaR 1.
- genomic libraries for cDNA libraries from any tissue are screened at low stringency with such probes, hybridizing clones are obtained which encode other members of the superfamily.
- antibodies can readily be prepared which bind to cloned or isolated inorganic-ion receptors. Such antibodies may also be used to isolate other receptors of the invention by expression-cloning techniques known to those of ordinary skill in the art.
- Targeted gene walking also may be employed to identify and clone members of the superfamily of inorganic-ion receptors.
- the clones may be obtained through expression cloning procedures as described above. These procedures can be adapted for the individual function of the inorganic-ion receptor of interest.
- calcium activated chloride currents may also be employed for cloning of an inorganic-ion receptor which forms a calcium channel or which mobilizes mtracellular calcium.
- Ligand-gated ion channels as
- the receptors of the present invention are distinct from other known ligand gated ion channels in their amino acid sequences and in that they sense inorganic ions such as calcium, magnesium, hydrogen ions, phosphate ions, and the like.
- each cloned receptor obtained in this manner provides new such DNA or antibody probes which themselves are used to identify still additional clones encoding inorganic-ion receptors. Furthermore, it will be appreciated that having obtained the sequence of more than one such receptor as outlined above, information is available pertaining to
- BoPCaR 1 BoPCaR 1
- Such conserved sequences also may be derived from an analysis of the overall structure of BoPCaR 1, as it conventionally includes an extracellular domain, transmembrane domain and mtracellular domain.
- nucleic acids encoding inorganic-ion receptors and unique fragments thereof are provided.
- the preferred receptor is a calcium receptor that is expressed in the tissues or cells selected from the group described above.
- the nucleic acid encodes a human
- the invention further provides isolation of the endogenous
- inorganic-ion receptors and agents that are capable of agonizing or gonizing the activity of these regulatory elements also may be identified.
- the invention further provides recombinant cells expressing the nucleic acids of the invention.
- the nucleic acid may be under the control of its genomic regulatory elements, or may be under the control of exogenous regulatory elements including an exogenous promoter.
- exogenous it is meant a promoter that is not normally coupled in vivo transcriptionally to the coding sequence for the inorganic-ion receptor.
- Purified antibodies to the foregoing inorganic-ion receptors are provided as well as antibodies to allosteric sites of such receptors and idiotypes of such receptors.
- Inorganic-ion receptor binding agents coupled to a toxin also are provided.
- Such agents may be antibodies and, as such, are immunotoxins.
- immunotoxins may be used for example in killing a cell expressing an inorganic-ion receptor in vitro or in vivo.
- the invention provides transgenic, nonhuman mammals containing a transgene encoding an
- inorganic-ion receptor or a unique fragment thereof.
- Such transgenes may be useful in affecting or altering the
- transgenes may be provided in such mammals, including those encoding antisense or a protein that is capable of altering the expression of a native
- agents may bind to promoters, other regulatory agents acting on promoters, agents capable of binding to the receptor and nucleic acids encoding the receptor or a unique fragment thereof.
- Contact may be by extracellular
- admmistration by providing a transgene encoding the agent or by any other suitable method depending upon the use to which the particular method is directed.
- Fig. 1 depicts representative molecules useful in the invention.
- Fig. 2 is a graphical representation showing
- the initial [Ca 2+ ] was 0.5 mM (using CaCl 2 ) and, at each of the arrows, was increased in 0.5 mM increments.
- Fig. 3 is a graphical representation showing mobilization of [Ca 2+ ] i in bovine parathyroid cells.
- the initial [Ca 2+ ] was 0.5 mM and was decreased to ⁇ 1 ⁇ M by the addition of EGTA as indicated.
- Extracellular Mg 2+ (8 mM, final) elicits an increase in [Ca 2+ ] i in the
- Fig. 4 is a graphical representation showing preferential inhibitory effects of a low concentration of Ga 3+ on steady-state increases in [Ca 2+ ] i and that a
- Fig. 5 is a graphical representation showing that the effects of PMA on [Ca 2+ ] i , IP 3 formation, and PTH
- Fig. 6 is a graphical representation showing that increases in [Ca 2+ ] i elicited by spermine are
- Fig. 7 is a graphical representation showing that spermine mobilizes mtracellular Ca 2+ in bovine parathyroid cells. EGTA was added to reduce [Ca 2+ ] to ⁇ 1 aM before the addition of spermine (200 ⁇ M) as indicated (left trace).
- Figs. 8A and B are graphical representations showing that spermine increases [Ca 2+ ] i and inhibits PTH secretion in bovine parathyroid cells similarly to extracellular
- Fig. 9 is a graphical representation showing the contrasting effects of PMA on responses to extracellular Ca 2+ and on responses to ATP ⁇ S in bovine parathyroi.d
- Fig. 10 is a graphical representation showing mobilization of mtracellular Ca 2+ in human parathyroid cells evoked by extracellular Mg 2+ .
- Cells were obtained from an adenoma and bathed in buffer containing 0.5 mM extracellular Ca 2+ .
- Fig. 11 is a graphical representation showing mobilization of mtracellular Ca 2+ evoked by neomycin or protamine in bovine parathyroid cells.
- the initial [Ca 2+ ] and [Mg 2+ ] was 0.5 and 1 mM, respectively.
- Fig. 12 is a graphical representation showing that neomycin B blocks transient but does not block steady-state increases in [Ca 2+ ] i elicited by extracellular Ca 2+ in bovine parathyroid cells. Left control: [Ca 2+ ] was
- Neomycin B (30 ⁇ M) was added before
- Fig. 13 is a graphical representation showing that neomycin B or protamine inhibit PTH secretion at
- Fig. 14 is a graphical representation showing the preferential inhibitory effects of PMA on cytosolic Ca 2+ transients elicited by spermine in bovine parathyroid cells.
- Fig. 15 is a graphical representation showing that
- Fig. 16 is a graphical representation showing that
- Fig. 17 is a graphical representation showing that protamine increases the formation of inositol phosphates in bovine parathyroid cells. Parathyroid cells were incubated overnight in culture media containing 4 ⁇ Ci/ml
- Fig. 18 is a graphical representation showing that
- PMA depresses the formation of IP 1 evoked by extracellular Ca 2+ or spermine in bovine parathyroid cells.
- Fig. 19 is a graphical representation showing transient and sustained increases in [Ca 2+ ] i elicited by neomycin B in human (adenoma) parathyroid cells.
- [Ca 2+ ] was 0.5 mM.
- the sustained increase in [Ca 2+ ] i elicited by neomycin B (10 ⁇ M) was depressed by La 3+ .
- (b) The sustained increase in [Ca 2+ ] i elicited by neomycin B (10 ⁇ M) was depressed by La 3+ .
- Fig. 20 is a graphical representation showing that neomycin B evokes oscillating increases the Cl- current in
- Xenopus oocytes expressing the Ca 2+ receptor Upper trace from an oocyte three days after injection with human
- Fig. 21 is a graphical representation showing that neomycin B fails to affect basal or evoked increases in
- Fig. 22 is a graphical representation showing that extracellular Ca 2+ evokes increases in [Ca 2+ ] i in rat
- osteoclasts Microfluorimetric recording in a single rat osteoclast loaded with indo-1 and superfused for the indicated times (bars) with buffer containing the indicated [Ca 2+ ].
- Fig. 23 is a graphical representation showing that spermine or neomycin B fail to evoke increases in [Ca 2+ ].
- Fig. 24 is a graphical representation showing the differential effects of argiotoxin (shown as argiopine in the figure, structures also shown in Fig. 1) 659 and argiotoxin
- argiotoxin 659 300 ⁇ M
- argiotoxin 636 400 ⁇ M
- Fig. 25 is a graphical representation showing that extracellular Mg 2+ or Ga 3+ evoke oscillatory increases in
- Trace (c) shows that extracellular Mg 2+ fails to elicit a response in an oocyte injected only with the mRNA for the substance K receptor, although superfusion with substance K evokes a response. Holding potential was -70 to
- Fig. 26 is a graphical representation showing that extracellular Ca 2+ elicits oscillatory increases in Cl- current in Xenopus oocytes injected with human (hyperplastic) parathyroid tissue poly(A) + -mRNA. The oocyte was tested for responsivity to extracellular Ca 2+ three days after
- Fig. 27 is a graphical representation showing the mobilization of mtracellular Ca 2+ in bovine parathyroid cells elicited by budmunchiamine.
- Budmunchiamine 300 ⁇ M, structure also shown was added where indicated.
- Fig. 28 is a graphical representation showing that the ability to mobilize mtracellular Ca 2+ in parathyroid cells is stereospecific.
- Bovine parathyroid cells loaded with fura-2 were initially suspended in buffer containing 0.5 mM extracellular Ca 2+ before the addition of the indicated concentration of each molecule.
- Fig. 29 is a graphical representation showing effects of La 3+ on [Ca 2+ ]. in osteoclasts.
- Figs. 30A and B are graphical representations showing the mobilization of mtracellular Ca 2+ elicited by extracellular Mn 2+ in rat osteoclasts. Extracellular Mn2+ evokes concentration-dependent increases in [Ca 2+ ] i (Fig.
- Figs. 31A and 31B are graphical representations showing mobilization of [Ca 2+ ]. in rat osteoclasts
- NPS 449 a molecule termed NPS 449 (see Fig. 38). Isolated rat osteoclasts loaded with indo-1 were superfused with the indicated concentrations of NPS 449 in the presence (Fig. 31A) or absence (Fig. 31B) of 1 mM extracellular CaCl,.
- Fig. 32 is a graphical representation showing the mobilization of mtracellular Ca 2+ in C-cells evoked by NPS
- rMTC 6-23 cells were loaded with fura-2 and bathed in buffer containing 0.5 mM [Ca 2+ ]. Where indicated,
- NPS 019 was added to a final concentration of 10 ⁇ M.
- [Ca 2+ ] i elicited by NPS 019 is refractory to inhibition by La 3+ (middle trace) and persists in the absence of extracellular Ca 2+ (right trace).
- Fig. 33 is a graphical representation showing that
- NPS 456 (Fig. 36) evokes oscillatory increases in Cl- current in Xenopus oocytes which have been injected with bovine parathyroid cell poly(A) + -mRNA.
- Fig. 34 is a graphical representation showing that extracellular Ca 2+ evokes oscillatory increases in Cl- current in Xenopus oocytes which have been injected with human osteoclast mRNA. The oocyte was tested for responsivity to extracellular Ca 2+ three days after injection of 50 ng of total poly(A) + -mRNA.
- Fig. 35 is a graphical representation showing that the parathyroid cell Ca 2+ receptor is encoded by mRNA m a size range of 2.5-3.5 kb.
- poly(A) + -mRNA was size fractionated on glycerol gradients and pooled into ten fractions. Each fraction was injected
- Fig. 36 shows the chemical structures of molecules derived from diphenylpropyl- ⁇ -phenethylamine illustrating a family of molecules which were prepared
- Fig. 37 is a graphical representation showing that
- NPS 021 is a calcilytic compound that blocks the effects of extracellular Ca 2+ on [Ca 2+ ] i in bovine parathyroid
- Fig. 38 is a graph showing in vivo Ca 2+ response to NPS R,S-467.
- Fig. 39 is a graph showing in vivo PTH response to
- Fig. 40 is a graph showing in vivo serum Ca 2+ response to 25 mg/kg NPS R,S-467.
- Fig. 41 is a graph showing the in vivo response of [Ca 2+ ] i in bovine parathyroid cells to different
- Fig. 42 is a graph showing the in vivo response of serum Ca 2+ in rats to different enantiomers of NPS 467.
- Fig. 43a depicts a reaction scheme. for the
- Fig. 43b depicts a reaction scheme for the synthesis of NPS 467.
- Fig. 44 depicts a dose-response curve showing that NPS 467 lowers serum ionized calcium in rats when administered orally.
- Fig. 45 is a restriction map of the plasmid containing BoPCaR 1, deposited with the ATCC under accession number ATCC 75416.
- Fig. 46 is a restriction map of BoPCaR 1.
- Fig. 47 is a nucleotide sequence corresponding (about 90% accurate) to the 2.2 Kbfragment of BoPCaR 1 sequenced.
- Calcimimetic and calcilytic molecules useful in the invention are generally described above. These molecules can be readily identified using screening procedures to define molecules which mimic or antagonize the activity of Ca 2+ at Ca 2+ receptors. Examples of such procedures are provided below. These examples are not limiting in the invention but merely illustrate methods which are readily used or adapted by those skilled in the art.
- calcimimetic and calcilytic molecules are identified by screening molecules which are modelled after those described below (called lead molecules). As can be seen below there are several specific calcimimetics and calcilytics useful at various Ca 2+ receptors. Derivative molecules are readily designed by standard procedures and tested in one of many protocols known to those skilled in the art. Many molecules may be screened easily to identify the most useful in this invention.
- Organic cationic molecules which mimic or antagonize the actions of Ca 2+ in other systems contain the requisite structure for activity on a Ca 2+ receptor. Rational
- Ga 3+ antagonizes the effects of Ga 3+ on the bovine parathyroid calcium receptor(s).
- the experiments outlined below are therefore aimed at demonstrating that this phenomenology, obtained with spermine, involves the same mechanisms used by extracellular Ca 2+ .
- the effects of spermine on a variety of physiological and biochemical parameters which characterize activation of the Ca 2+ receptor were assessed. Those molecules having
- bovine parathyroid cells loaded with fura-2 are initially suspended in buffer containing 0.5 mM
- test substance is added to the cuvette in a small volume (5-15 ⁇ l) and any change in the fluorescence signal noted. Cumulative increases in the concentration of the test substance are made in the cuvette until some predetermined concentration is achieved or changes in fluorescence noted. If no changes in fluorescence are noted, the molecule is considered inactive and no further testing is performed. In initial studies, e.g., with polyamine-type molecules, molecules were tested at
- concentration is lowered.
- newer molecules are tested at concentrations up to 500 ⁇ M or less. If no changes in fluorescence are noted at this concentration, the molecule can be considered inactive.
- Measuring [Ca 2+ ] i with fura-2 provides a very rapid means of screening new organic molecules for activity. In a single afternoon, 10-15 molecules can be examined and their ability to mobilize mtracellular Ca 2+ (or not) assessed. The sensitivity of any observed increase in [Ca 2+ ] i to depression by PMA can also be assessed. Moreover, a single cell preparation can provide data on [Ca 2+ ] i , cyclic AMP levels, IP 3 and PTH secretion. A typical procedure is to load cells with fura-2 and then divide the cell suspension in two; most of the cells are used for measurement of
- rat MTC 6-23 cell line using, e.g., the rat MTC 6-23 cell line.
- PCB parathyroid cell buffer
- HPT hyperparathyroidism
- Dissociated cells were then purified by centrifugation in Percoll buffer.
- the resultant parathyroid cell preparation was essentially devoid of red blood cells, adipocytes, and capillary tissue as assessed by phase contrast microscopy and Sudan black B staining.
- Dissociated and purified parathyroid cells were present as small clusters containing 5 to 20 cells.
- Primary culture also has the advantage that cells can be labeled with isotopes to near isotopic
- ITS + is a premixed solution containing insulin, transferrin, selenium, and bovine serum albumin
- the cells were then transferred to plastic flasks (75 or 150 cm 2 ; Falcon) and incubated at 37°C in a humid atmosphere of 5% CO 2 . No serum is added to these overnight cultures, since its presence allows the cells to attach to the
- the cells were diluted five-fold with prewarmed 0.5 mM CaCl 2 -PCB to obtain a final BSA concentration of 0.1%.
- the concentration of cells in the cuvette used for fluorescence recording was 1-2 x 10 6 /ml.
- the fluorescence of indicator-loaded cells was measured at 37°C in a spectrofluorimeter (Biomedical
- Fluorescence signals were calibrated using digitonin
- F min fluorescence
- dissociation constant 224 nM. Leakage of dye is dependent on temperature and most occurs within the first 2 min after warming the cells in the cuvette; dye leakage increases only very slowly thereafter.
- cells were placed in the cuvette and stirred at 37°C for 2-3 min. The cell suspension was then removed, the cells pelleted, and the supernatant returned to a clean cuvette.
- the amount of PTH in sample supernatants was determined by a homologous radioimmunoassay using GW-1 antibody or its equivalent at a final dilution of 1/45,000.
- 125 I-PTH 65-84; INCSTAR, Stillwater, MN was used as tracer and fracti ⁇ ns separated by dextran-activated charcoal. Counting of samples and data reduction were performed on a Packard Cobra 5005 gamma counter.
- Membrane phospholipids were labeled by incubating parathyroid cells with 4 ⁇ Ci/ml 3H-myo-mositol for
- Inositol phosphates were separated by ion- exchange chromatography using AG1-X8 in either the chloride- or formate-form. When only IP 3 levels were to be
- the chloride-form was used, whereas the formate form was used to resolve the major inositol phosphates (IP 3 , IP 2 , and IP 1 ).
- IP 3 major inositol phosphates
- the diluted sample was applied to the chloride-form column and the column washed with 10 ml 30 mM HCl followed by 6 ml 90 mM HCl and the IP 3 eluted with 3 ml 500 mM HCl. The last eluate was diluted and counted.
- the diluted sample was applied to the formate-form column and IP 1 , IP 2 , and
- IP 3 eluted sequentially by increasing concentrations of formate buffer.
- the eluted samples from the formate columns were rotary evaporated, the residues brought up in cocktail, and counted.
- Neoplastic C-cells derived from a rat medullary thyroid carcinoma (rMTC 6-23) obtained from American Type
- DMEM Dulbecco's Modified Eagle's medium
- Sprague-Dawley rats using aseptic conditions.
- the rat pups were sacrificed by decapitation, the hind legs removed, and the femora rapidly freed of soft tissue and placed in prewarmed F-12/DMEM media (DMEM containing 10% fetal calf serum and antibiotics (penicillin-streptomycin-gentamicin;
- the bones from two pups were cut lengthwise and placed in 1 ml culture medium. Bone cells were obtained by gentle trituration of the bone fragments with a plastic pipet and diluted with culture medium. The bone fragments were allowed to settle and equal portions (about 1 ml) of the medium transferred to a 6-well culture plate containing 25 mm glass coverslips. The cells were allowed to settle for 1 hr at 37°C in a humidified 5%
- fluorescence emitted by excitation at 340 nm was directed through the video port of the microscope onto a 440 nm dichroic mirror and fluorescence intensity at 495 and 405 nm collected by photomultiplier tubes.
- the outputs from the photomultiplier tubes were amplified, digitized, and stored in an 80386 PC. Ratios of fluorescence intensity were used to estimate [Ca 2+ ] i .
- Neomycin B evoked oscillatory increases in the Cl- current which ceased upon superfusion with drug-free saline (see Fig. 20). Responses to neomycin B were observed at concentrations between
- neomycin B 100 ⁇ M and 10 mM.
- the effect of neomycin B on currents in water-injected oocytes was determined.
- neomycin B (10 mM) failed to cause any change in the current.
- About 40% of oocytes are known to respond to carbachol, an effect mediated by an endogenous muscarinic receptor.
- neomycin B fails to evoke a response. This shows that the response to neomycin B depends on expression of a specific protein encoded by parathyroid cell mRNA. It suggests quite strongly that in intact cells, neomycin B acts directly on the Ca 2+ receptor to alter parathyroid cell function.
- the molecules tested are not necessarily suitable as drug candidates, but they serve to demonstrate that the hypothesis underlying Ca 2+ receptor-based therapies is correct. These molecules can be used to determine the structural features that enable them to act on the Ca 2+ receptor, and thus to select molecules useful in this invention.
- the first series of molecules studied were the aminoglycosides.
- the molecules were examined on bovine parathyroid cells and their EC 50 's for the mobilization of mtracellular Ca 2+ determined.
- streptomycin 600 ⁇ M. Kanamycin and lincomycin were without effect when tested at a concentration of 500 ⁇ M.
- neomycin B (+6) > gentamicin (+5) bekanamycin (+5) > kanamycin (average +4.5) > streptomycin (+3) > lincomycin
- NPS 381 and NPS 382 were examined for effects on [Ca 2+ ] i in bovine parathyroid cells.
- bovine parathyroid cells yet both molecules carry a net positive charge of +4.
- the only difference in structure between these two polyamines is the number of methylenes separating the nitrogens: in spermine it is 3-4-3 whereas in triethylenetetramine it is 2-2-2. This seemingly minor change in the spacing between nitrogens has profound
- Arqiope lobata These molecules, argiotoxin 636 and
- argiotoxin 659 have identical polycationic portions linked to different aromatic groups (Fig. 24). Argiotoxin 659 evoked transient increases in [Ca 2+ ] i in bovine
- parathyroid cells when tested at concentrations of 100 to
- argiotoxin 636 was without effect when tested at similar concentrations (Fig. 24).
- the only difference in structure between these two arylalkylamines is in the aromatic portion of the molecules: argiotoxin 659 contains a 4-hydroxyindole moiety whereas argiotoxin 636 contains a 2,4-dihydroxyphenyl group.
- the net positive charge on these two arylalkylamines is the same (+4), so their different potencies must result from the different aromatic groups. This shows that net positive charge alone does not determine potency.
- the real importance of these findings, however, is the discovery that aromatic groups contribute significantly to the ability of molecules to activate the Ca 2+ receptor.
- Agatoxin 489 (NPS 017) and Agatoxin 505 (NPS 015) both cause the mobilization of mtracellular Ca 2+ in
- parathyroid cells with EC 50 's of 6 and 22 ⁇ M
- aromatic groups can be examined, e.g., in a variety of arylalkylamines isolated from the venoms of wasps and spiders; and synthetic molecules can be prepared by the coupling of commercially available aromatic moieties to the argiotoxin polyamine moiety.
- the argiotoxin polyamine moiety can be readily coupled to any aromatic moiety containing a carboxylic acid. Thus, it is simple to systematically screen the hydroxy and methoxy derivatives of phenylacetic acid and benzoic acid as well as the
- heteroaromatic functionalities can also be prepared and assessed for activity.
- Budmunchiamine A isolated from the plant Albizia amara, is a cyclic derivative of spermine (Fig. 1). The addition of budmunchiamine A to bovine parathyroid cells caused a rapid and transient increase in [Ca 2+ ] i that persisted in the absence of extracellular Ca 2+ and was blunted by
- Pithecolobium and other plant-derived molecules can be screened.
- Fig. 36 provides a second example of a series of molecules which were screened to determine useful molecules of this invention. These molecules were generally derived from fendiline and tested to determine their respective EC 50 's. Moreover, testing of related molecules, such as NPS 447 and NPS 448 reveals stereospecific effects of molecule structure. The most active compounds tested to date are the novel compounds designated NPS 467 and NPS 568 which have EC 50 values of less than 5 ⁇ M. Those in the art, by reviewing this series of molecules, can determine other suitable derivatives which can be tested in the invention. These examples demonstrate the general design and screening process useful in this invention, and indicate that additional compound and natural product libraries can be screened as desired by those in the art to determine other useful lead molecules or novel molecules of this invention.
- examples of molecules useful as calcimimetics include branched or cyclic polyamines, positively charged polyamino acids, and arylalkylamines.
- other positively charged organic molecules including naturally occurring molecules and their analogs, are useful calcimimetics.
- molecular weight in daltons from about 1:40 to 1:200, preferably from about 1:40 to 1:100. More specific examples of such molecules are provided below.
- the polyamines useful as calcimimetics in this invention may be either branched or cyclic. Branched or cyclic polyamines potentially have higher calcimimetic activity than their straight-chain analogs. That is, branched or cyclic polyamines tend to have a lower EC 50 than their corresponding linear polyamines with the same effective charge at physiological pH (see Table 1).
- Branched polyamines refers to a chain molecule consisting of short alkyl bridges or alkyl groups joined together by amino linkages, and also
- branch points can be located at either a carbon atom or a nitrogen atom, preferably at a nitrogen atom.
- a nitrogen atom branch point is typically a tertiary amine but it may also be quaternary.
- a branched polyamine may have 1 to 20 branch points, preferably 1 to 10 branch points.
- the alkyl bridges and alkyl branches in a branched polyamine are from l to 50 carbon atoms in length, preferably from 2 to 6 carbon atoms.
- the alkyl branches may also be interrupted by one or more heteroatoms (nitrogen, oxygen or sulfur) or substituted with functional groups such as: halo, including fluoro, chloro, bromo, or iodo;
- alkyl branches may also be substituted with groups that are positively charged at physiological pH, such as amino or guanido. These functional substituents may add or change physical properties such as solubility to increase activity, delivery or bioavailability of the molecules.
- the branched polyamines may have three or more chain and branch termination points. These termination points may be methyl groups or amino groups, preferably amino groups.
- One preferred group of molecules is the group of branched polyamines having the formula:
- each j is the same or different and is an integer from 2 to 20, and each R. is the same or different and is selected from the group
- Particularly preferred branched polyamines of this invention are the molecules
- heterocycles containing two or more heteroatoms (nitrogen, oxygen or sulfur), at least two of which are nitrogen atoms.
- the heterocycles are generally from about 6 to about 20 atoms in circumference, preferably from about 10 to about 18 atoms in circumference.
- the nitrogen heteroatoms are separated by 2 to 10 carbon atoms.
- the heterocycles may also be substituted at the nitrogen sites with aminoalkyl or aminoaryl groups (NH 2 R-), wherein R is aminoaryl or a lower alkyl of 2 to 6 carbon atoms.
- the polyamino acids useful in this invention may contain two or more positively charged amino acid residues at physiological pH. These positively charged amino acids include histidine, lysine and arginine. These polypeptides will vary in length from 2 to 800 amino acids in length, more preferably from 20 to 300 amino acids in length. These polypeptides may consist of a single repeating amino acid residue, or may have the variety of a naturally occurring protein or enzyme.
- the amino acid residues comprising the polyamino acids may be any of the twenty naturally occurring amino acids, or other alternative residues.
- Alternative residues include, for example, the ositions of this invention may also contain components derivatized with a molecule or ion which acts as a label.
- labeling moieties can be used, including radioisotopes, chromophores, and fluorescent labels. Radioisotope labeling in particular can be readily detected in vivo. Radioisotopes may be coupled by coordination as cations in the porphyrin system. Useful cations include technetium, and indium.
- the positively charged molecule can be linked to or associated with a label.
- Chain extensions of 2-4 methylenes were typically accomplished by alkylation with the corresponding
- N-(bromoalkyl)phthalimide N-(bromoalkyl)phthalimide.
- a 1:1.2 mixture of amine to the bromoalkylphthalimide was refluxed in acetonitrile in the presence of 50% KF on Celite. Chain extensions were also accomplished by alkylation of a given amine with
- BOC protecting groups were added by the treatment of an amine (1° or 2°) with di-tert-butyl dicarbonate in dichloromethane in the presence of a catalytic amount of dimethylaminopyridine.
- Benzyl protecting groups were applied in one of two ways: (1) condensation of a 1 amine with benzaldehyde followed by sodium borohydride reduction or (2) alkylation of a 2° amine with benzylbromide in the presence of KF.
- Amide linkages and cyclizations were typically performed by the reaction of an amine (1° or 2°) with the N-hydroxysuccinimide ester of a given acid. This was accomplished directly (in the case of cyclizations) by treatment of the "amino acid" with dicyclohexylcarbodiimide under dilute conditions.
- Deprotections of the phthalimido functionality were accomplished by reduction with hydrazine in refluxing methanol.
- Deprotections of the BOC functionality were accomplished in anhydrous TFA.
- Deprotection of benzyl, nitrile, and CBZ protecting functionalities was accomplished by reduction in glacial acetic acid under 55 psi hydrogen in the presence of a catalytic amount of palladium hydroxide on carbon.
- Nitrile functionalities in the presence of benzyl and CBZ groups were selectively reduced under hydrogen in the presence of sponge Raney nickel.
- branched polyamines are typically prepared from simple diaminoalkanes of the formula NH 2 - (CH 2 ) n -NH 2 , or simple polyamines such as spermidine or spermine.
- a protecting group such as BOC (t-butyloxycarbonyl), phthalimido, benzyl, 2- ethylnitrile (the Michael condensation production product of an amine and acrylonitrile), or amide.
- a typical reaction is the addition of a BOC protecting group by treatment with
- the monoprotected product is separated from the unprotected and diprotected products by simple chromatographic or distillation techniques.
- alkylating (or acylating) agent To ensure mono- alkylation, the free amine is partially protected by
- N-benzyl derivative is then reacted with the alkylating agent.
- a typical alkylating agent is in an
- N-(bromoalkyl)phthalimide which reacts as follows:
- N-(bromobutyl)phthalimide is used to extend or branch the chain with four methylene units.
- reaction with acrylonitrile followed by reduction of the cyano group will extend the chain by three methylenes and an amino group.
- the protecting groups of the resulting chain- extended molecule can then be selectively cleaved to yield a new free amine.
- trifluoroacetic acid is used to remove a BOC group
- catalytic hydrogenation is used to reduce a nitrile functionality and remove a benzyl group
- hydrazine is used to remove phthalimido groups as follows:
- the new free amine may be alkylated (or acylated) further as above to increase the length of the polyamine. This process is repeated until the desired chain length and number of branches is obtained. In the final step,
- the polyamine is acylated with the N-hydroxysuccinimide ester of
- Certain branched polyamines may be formed by simultaneously alkylating or acylating the free primary and secondary amines in a polyamine formed as above. For example, treatment of spermine with excess acrylonitrile followed by catalytic reduction yields the following:
- Cyclic polyamines may be prepared as above beginning with starting materials such as hexacylen (Aldrich Chem.).
- polyamino acids within the scope of the present invention can be made by recombinant techniques known in the art, or may be synthesized using standard solid-phase techniques known in the art. Solid-phase synthesis is commenced from the carboxy-terminal end of the peptide using an ⁇ -amino protected amino acid. BOC protective groups can be used for all amino groups even through other
- BOC-lys-OH can be esterified to chloromethylated polystyrene resin
- the polystyrene resin support is preferably a copolymer of styrene with about 0.5 to 2% divinylbenzene as a cross-linking agent which causes the polystyrene polymer to be completely insoluble in certain organic solvents.
- the polystyrene resin support is preferably a copolymer of styrene with about 0.5 to 2% divinylbenzene as a cross-linking agent which causes the polystyrene polymer to be completely insoluble in certain organic solvents.
- polypeptide synthesis may use manual techniques or automatically employing, for example, an Applied
- arylalkylamines of the invention are natural products isolated by known techniques, or synthesized as described in Jasys et al., Tetrahedron Lett. (1988)
- fendiline (or fendiline analogs shown in Fig. 36) is as follows.
- 1.0 mmole 3,3'- bisphenylpropylamine (or primary alkyl amine) in 2 ml ethanol was treated with 1.1 mmole phenol and 1.0 mmole acetophenone (or substituted acetophenone).
- 2.0 mmoles MgSO 4 and 1.0 mmole NaCNBH 3 was stirred under a nitrogen
- a preferred procedure for preparing fendiline or fendiline analogs uses titanium(IV) isopropoxide and was modified from methods described in J . Org. Chem. 55:2552 (1990). For the
- a secondary amine may be used in place of ( 1 ) .
- some reactions will give heavy precipitates or solids which are warmed/heated (to their melting point) to allow for stirring/mixing several times over the course of the reaction.
- the reaction mixture is treated with 1 ml ethanol containing 1 mmole sodium cyanoborohydride (4) and the resulting mixture is then allowed to stand at room temperature with occasional stirring for about 16 hours. After this time the reaction is quenched by the addition of about 500 ⁇ l water.
- the reaction mixture is then diluted to about 4 ml total volume with ethyl ether and then centrifuged. The upper organic phase is removed and reduced on a rotavapor.
- the resulting product, ( 6 ) is partially purified by chromatography through a short column of silica (or alternatively by using preparative TLC on silica) using combination of dichloromethane:methanol: isopropylamine (typically 95:5:0.1), prior to purification by HPLC (normal phase using silica with dichloromethane:methanol:
- chiral resolution may be accomplished using methods such as those described in
- inventions may be used to: (a) mimic or antagonize one or more of the effect of an extracellular ion, including extracellular Ca 2+ ; (b) affect the extracellular free
- Ca 2+ level in an individual and (c) treat diseases such as hyperparathyroidism, osteoporosis and hypertension.
- diseases or conditions involving inorganic-ion receptors now can be studied, diagnosed and/or beneficially treated. While the molecules have generally been shown to have an effect on parathyroid cells, they may also modulate the Ca 2+ receptors on other cells, including bone
- osteoclasts juxtaglomerular kidney cells, proximal tubule kidney cells, distal tubule kidney cell, cell of the thick ascending limb of Henle's loop and/or collecting duct, keratinocyte in the epidermis, parafollicular cell in the thyroid (C-cells), intestinal cell, trophoblast in the placenta, platelet, vascular smooth muscle cell, cardiac atrial cell, gastrin and glucagon secreting cells, kidney mesangial cell and mammary cell.
- While these molecules will typically be used in therapy for human patients, they may be used to treat similar or identical diseases in other warm-blooded animal species such as other primates, farm animals such as swine, cattle, and poultry; and sports animals and pets such as horses, dogs and cats.
- the molecules of the invention can be formulated for a variety of modes of administration, including systemic and topical or localized administration. Techniques and formulations generally may be found in Remington's Pharmaceutical
- oral administration is preferred.
- injection may be used, e.g., intramuscular, intravenous, intraperitoneal, and
- the molecules of the invention are formulated in liquid solutions, preferably in
- physiologically compatible buffers such as Hank's solution or Ringer's solution.
- the molecules may be formulated in solid form and redissolved or suspended immediately prior to use. Lyophilized forms are also included.
- Systemic administration can also be by transmucosal or transdermal means, or the molecules can be administrated orally.
- penetrants appropriate to the barrier to be permeated are used in the formulation.
- penetrants are generally known in the art, and include, for example, for transmucosal administration bile salts and fusidic acid derivatives.
- detergents may be used to facilitate permeation.
- Transmucosal administration may be through nasal sprays, for example, or using suppositories.
- the molecules are formulated into conventional oral
- administration forms such as capsules, tablets, and tonics.
- the molecules of the invention are formulated into ointments, salves, gels, or creams, as is generally known in the art.
- : administered can be determined by standard procedures.
- These recombinant receptors allow for the first time screening mimics and lytics, including calcimimetics and calcilytics. For example, by binding assays with the receptors. This is particularly useful in screening with the human receptors in order to identify therapeutically useful compounds.
- the bovme and human parathyroid cell Ca 2+ receptor cDNA can be cloned by functional expression in Xenopus
- antisera or protein or nucleic acid sequence information.
- Xenopus I (Ann Arbor, MI) and maintained according to standard procedures.
- Lobes of ovary were excised from hypothermically-anesthetized toads.
- Clusters of oocytes were transferred into modified Barth's saline (MBS).
- MBS Barth's saline
- Individual oocytes were obtained by incubation in MBS containing 2 mg/ml collagenase (Sigma, Type 1A) for 2h at 21°C and stage V-VI oocytes were selected for injection.
- DEPC diethylpyrocarbonate
- the capillary tube was then connected to a picospritzer (WPI Instruments) and the volume of the air-pulsed droplets adjusted to deliver 50 ng of mRNA (typically 50 nl).
- a 35 mm culture dish with a patch of nylpn. stocking fixed to the bottom was used to secure the oocytes during injection of mRNA into the vegetal pole.
- the injected oocytes were placed into a 35 mm culture dish containing MBS, 100 ⁇ g/ml penicillin and 100 ⁇ g/ml streptomycin and incubated at
- an oocyte was placed into a 100 ⁇ l plastic chamber and superfused with MBS at a flow rate of 0.5 ml/min using a peristaltic pump.
- Test molecules or inorganic polycations were added by rapidly moving the tubing into different buffers. Recording and
- current-passing electrodes were constructed from thin wall capillary tubing pulled to a resistance of 1-3 Mohms and filled with 3 M KCl. Oocytes were impaled (in the animal pole) with both electrodes under microscopic observation and connected to an Axon Instruments Axoclamp 2A voltage-clamp amplifier which was used to set the holding potential (-70 to -80 mV) and to measure the currents that were passed to maintain the holding potential. Currents were recorded directly onto a strip chart recorder.
- tissue was obtained from calves or patients with secondary HPT undergoing surgical removal of the parathyroid glands. Purified cells need not be prepared; whole pieces of gland were used to prepare mRNA that directs the expression of the Ca 2+ receptor in
- mRNA 50-100 ⁇ g of poly(A) + ) may be
- RNAid binding matrix according to the
- Amounts of recovered mRNA were quantified by UV absorbance measurement.
- the size range of mRNA contained within each fraction of the glycerol gradient was determined by formaldehyde/agarose gel electrophoresis using a small quantity (0.5 ⁇ g) of each sample.
- the integrity of the mRNA was assessed by in vitro translation of each sample.
- Reticulocyte lysates (commercially available kits; BRL) were used to translate 0.05-0.5 ⁇ g of each mRNA fraction.
- the resulting 35S-labelled proteins were analyzed by
- the intact mRNA was capable of directing the synthesis of proteins of a complete size range
- a cDNA library was constructed in the vector ⁇ ZAPII, following modifications of the technique of Gubler and Hoffman. RNA from the fraction(s) giving the best response in the oocyte assay was used as starting material. First-strand cDNA syntheses was primed with an oligo-dT/Notl primer-linker. Second-strand synthesis was by the RNase H/DNA Polymerase I self-priming method. Double-stranded cDNA was blunted with T4 DNA polymerase and EcoRI adaptors blunt-end ligated to the cDNA with T4 ligase. Following
- the average insert size was determined from ten randomly selected clones. Phage DNA "mini-preps" were digested with EcoRI and NotI to release the insert, and the size determined by agarose gel electrophoresis. The library consisted of >90% recombinant phage, and the insert size ranged from 1.5 to 4.2 kb. The recombinant ligation was packaged in large scale to generate 800,000 primary clones. The packaging mix was titered and plated at 50,000 plaques per 15 cm plate. Each pool of 50,000 clones was eluted in SM buffer and stored individually.
- Phage particles are concentrated by polyethylene glycol precipitation, and phage DNA purified by proteinase K digestion followed by phenol : chloroform extraction. Twenty micrograms of DNA are digested with NotI, and used as template for in vitro
- RNA is concentrated by ethanol precipitation and used for oocyte injection.
- Oocytes were injected with synthetic mRNA (cRNA) from each of the 16 library subpools constituting 50,000
- pool 6 gave a positive signal and thus contains a cDNA clone encoding a functional calcium receptor.
- pool 6 phage were replated at ⁇ 20,000 plaques per plate and 12 plates harvested. DNA was prepared from each of these subpools and cRNA synthesized.
- oocytes were injected with cRNA and assayed 3-4 days later for the ability of 10 mM neomycin to elicit a Ca 2+- dependent Cl-current.
- a subpool pool 6-3 was positive and this pool was subjected to a further round of plating, reducing the complexity of pools to around 5,000 clones per pool. Pools were again assayed by preparation of cRNA and injection in oocytes.
- a subpool pool 6-3.4 was positive.
- oocytes can be loaded with 45 Ca ++ and then treated with a calcimimetic. Mobilization of 45 Ca ++ from
- Fluorescent Ca ++ indicators may also be injected into oocytes. In this case, oocytes expressing a calci t will exhibit increased fluorescence upon activation with a calcimimetic.
- These assays may be employed for cloning calcium receptors in place of the electrophysiological assay for calcium induced Cl- current described in the above example.
- the calcimimetic ligand used in the cloning procedure need not be neomycin as indicated above but could instead be, for example, Gd +++ , Ca ++ , Mg ++ or other calcimimetic
- oocytes were injected with the mRNA encoding the substance K receptor. In these oocytes, extracellular Mg 2+ (20 mM) did not evoke any current but the cells
- parathyroid cell mRNA was size fractionated by centrifugation through a glycerol gradient. Ten fractions were collected. Each group was injected into Xenopus oocytes and after a three day incubation period the oocytes were assayed for expression of the Ca 2+ receptor. Those oocytes injected with fractions 4-6 showed the largest and most consistent increases in Cl- current in response to extracellular
- mRNA fractions obtained and characterized in the preceding, experiments can be assayed by injection into oocytes.
- 10-20 oocytes are injected with 50 ng of RNA at a concentration of 1 ng/nl in water.
- Injected oocytes are maintained at 18°C for 48-72 h after which they are assessed for expression of the Ca 2+
- Ca 2+ -dependent Cl- current measured is determined.
- oocytes are injected with rat liver poly(A) + -enriched mRNA, yeast RNA, or water.
- mRNA in the range of 2.5 - 3.5 kb will encode the receptor.
- mRNA of a larger size may necessitate a cloning approach based on hybrid depletion of parathyroid mRNA prior to oocyte injection. This strategy is not dependent upon the generation of full-length cDNA clones for success. If receptor expression is not obtained with a single size fraction of mRNA, oocytes are injected with mixed size fractions to determine a combination that does give rise to a functional receptor. If it does appear that multiple subunits are necessary for the formation of a functional receptor, the hybrid depletion expression cloning strategy is used.
- clones are selected on the basis of their ability to deplete a specific mRNA species from the total mRNA population.
- a clone encoding a single subunit is identified by its ability to prevent the formation of the active multi-subunit complex.
- RNA from pools of clones are assayed for their ability to induce expression of the Ca 2+ receptor in Xenopus oocytes by the same techniques used to analyze the original mRNA fractions. Originally, 10 pools representing 100,000 primary clones each are examined.
- transcripts are generated from those DNA templates that induce a positive response. Anti-sense transcripts are unable to give rise to an authentic receptor, and this will control any non-specific positive signal arising from injection of synthetic RNA. Another concern is the fact that synthetic RNA can occasionally "poison" translation in injected oocytes, by an undefined mechanism. To control for this possibility, synthetic RNAs giving a negative response are co-injected at various dilutions with parathyroid cell mRNA, to determine if they are non-specifically interfering with the expression of the Ca 2+ receptor.
- the cDNA insert When an individual clone encoding the Ca 2+ receptor is identified, the cDNA insert will be excised from the vector and used for large scale production of synthetic
- RNA Oocyte injection of this single RNA species allows rigorous assessment of the characteristics of the expressed receptor.
- cDNA insert DNA will be prepared from pools of clones from the size-selected parathyroid cell cDNA library. This
- DNA is hybridized to parathyroid cell mRNA under conditions that permit the formation of DNA/RNA duplexes.
- hybrid-depleted RNA is recovered and used for oocyte injections.
- Other methods for hybrid-depletion or hybrid-arrest may be used alternatively and are well known by those skilled in the art.
- DNA from pools of clones contai .ni.ng sequences representi.ng Ca 2+ -receptor mRNA is depleted from this mRNA from the total parathyroid cell mRNA population, and expression of the receptor is reduced or absent upon oocyte injection.
- Human parathyroid cells express a beta-adrenergic receptor coupled to adenylate cyclase.
- This receptor can be expressed in oocytes, where it is capable of agonist-induced activation of the endogenous adenylate cyclase.
- oocytes injected with hybrid depleted mRNA are assayed for isoproterenol-induced adenylate cyclase activation.
- a positive response in this assay serves to indicate that any observed inhibition of Ca 2+ receptor response ls specific, and not due to a general inhibition of the total mRNA population.
- the hybrid-depletion screening strategy can result in the isolation of clones that do not contain a complete protein coding region. Positive clones isolated by this screening strategy are sequenced to determine their protein coding capacity. Northern blot analysis of human
- parathyroid gland RNA permits the determination of the size of the complete mRNA corresponding to specific clones. If positive clones do not appear to be full length, the cloned cDNA will be used as a hybridization probe to screen a parathyroid gland cDNA library for complete cDNAs.
- a variety of cell lines are capable of coupling exogenously expressed receptors to endogenous functional responses.
- a number of these cell lines e.g., NIH-3T3,
- HeLa, NG115, CHO, HEK 293 and COS7 can be tested to confirm that they lack an endogenous Ca 2+ receptor.
- Those lines lacking a response to external Ca 2+ can be used to establish stably transfected cell lines expressing the cloned Ca 2+ receptor.
- a eukaryotic expression vector such as pMSG, in which the coding sequence for the Ca 2+ receptor cDNA has been cloned into the multiple cloning site.
- pMSG eukaryotic expression vector
- These expression vectors contain a promoter region, such as the mouse mammary tumor virus promoter (MMTV), that drive high-level MMTV.
- MMTV mouse mammary tumor virus promoter
- these vectors contain genes for the selection of cells-that stably express the cDNA of interest.
- selectable marker in the pMSG vector encodes an enzyme, xanthine-guanine phosphoribosyl transferase (XGPRT), that confers resistance to a metabolic inhibitor that is added to the culture to kill the nontransfected cells.
- XGPRT xanthine-guanine phosphoribosyl transferase
- the Ca 2+ receptor expression construct will be introduced into cultured cells by the appropriate technique, either Ca 2+ phosphate precipitation, DEAE-dextran
- DNA will be identified by their resistance to selection media, as described above, and clonal cell lines will be produced by expansion of resistant colonies. The expression of the Ca 2+ receptor cDNA by these cell lines will be
- Functional expression of the receptor protein will be determined by measuring the mobilization of
- Recombinantly produced receptor may be crystallized for structural studies. Stably transfected cell lines
- expressing the receptor can be used for high-throughput screening of natural product or other compound libraries.
- Molecules of the requisite potency and specificity can be labeled (radioactively or fluorescently).
- the ability of test molecules/extracts to displace such a labeled molecule will form the basis of a high-throughput assay for screening.
- Xenopus laevis frogs are anesthetized by immersion in 0.17% Tricaine and a lobe of the ovary removed and minced into small pieces.
- Individual stage V-VI oocytes are isolated using an L-shaped capillary tube after incubating the
- ovarian tissue in a calcium-free buffer at room temperature for 90 min.
- the separated oocytes are then incubated in collagenase solution
- the defolliculated oocytes are incubated overnight in frog ringer [ND96] at 17°C and degenerating oocytes removed [usually ⁇ 2-3% of the total]. Surviving oocytes are then injected with 50 nl H 2 O [control] or
- the frog ringer, ND96 contains (mM) : NaCl (96), KCl (2), CaCl 2 (0.5), MgCl 2
- Total RNA is extracted from the tissue [kidney, osteoclasts, etc.] with guanidinium thiocyanate and
- Poly(A) RNA is then isolated by oligo(dT) cellulose chromatography [two passes through the column]. The integrity of the poly(A) RNA is assessed by agarose gel electrophoresis. The ability of 25-50 ng of poly(A) +RNA to give rise to Ca 2+ -dependent Cl- channel activity upon exposure to extracellular Ga 3+ is assessed
- the next step ls to localize the mRNA expressing Ca 2+ receptor activity to a small size range ( ⁇ 1 kb). For this purpose, -100 ⁇ g of poly(A) RNA is separated by sucrose
- poly(A) RNA can be any poly(A) RNA.
- ⁇ 200-300 ⁇ g of poly(A) RNA can be any poly(A) RNA.
- X. laevis oocytes are injected with pools of fractions [3-5 fractions/pool] of poly(A)+RNA [0.2-0.5 ng/oocyte] fractions from the pool(s) and the ability of these pools to give rise to Ca 2+
- a directional cDNA library is constructed from this poly(A)+RNA pool using the Superscript Plasmid system
- cDNA is sized by gel electrophoresis and the appropriate cDNA size region [based on the poly(A)+RNA size range] is extracted using GENECLEAN
- This size selected cDNA is then directionally ligated into the pSPORT1 plasmid vector using a Not I primer at the.3' end and an adapter for Sal I at the 5' end.
- the resulting plasmids are introduced into ELECTROMAX DH10B cells [BRL] by electroporation.
- the transformed bacteria are grown on nitrocellulose filters [500-800
- a restriction map of the Ca 2+ receptor cDNA is generated and suitable restriction fragments subcloned into pSPORT1.
- Subcloned cDNAs are bidrectionally sequenced using standard methods [Sequenase Polymerase 2® 2, USB].
- Sequencing primers (18-mer) are used where necessary to sequence regions within or between subclones or to resolve compressions or ambiguous regions of sequence.
- the coding region for the Ca 2+ receptor protein is determined from the longest open reading frame that has a start site
- Hydropathy and other protein algorithms are used to generate a topology for the Ca 2+ receptor protein.
- the nucleotide sequence of the cDNA, the amino acid sequence of the Ca 2+ receptor protein, and the protein topology are compared with that for the other Ca 2+ receptors and other known cDNAs and proteins present in the database. Homologous regions might represent domains involved in cation binding or regulation.
- inorganic-ion receptor nucleic acid is based upon
- Region specific primers or probes derived from BoPCaR 1 can be used to prime DNA synthesis and PCR amplification, as well as to identify colonies containing cloned DNA encoding a member of the inorganic ion receptor family using known methods (Innis et al., PCR Protocols, Academic Press, San Diego, CA (1990)).
- primers that are derived from nucleic acid encoding an inorganic-ion receptor
- sequences which are greater than about 76% homologous to the primer will be amplified.
- DNA probes derived from inorganic ion receptors for colony/plaque hybridization When using DNA probes derived from inorganic ion receptors for colony/plaque hybridization, one skilled in the art will recognize that by employing high stringency condition, hybridization at 50-65°C, 5X SSPC, 50% formamide, wash at 50-65°C, 0.5X SSPC, sequences having regions which are greater than about 90% homologous to the probe can be obtained, and by employing lower stringency conditions, hybridization at 35-37°C, 5X SSPC, 40-45% formamide, wash at 42°C SSPC, sequences having regions which are greater than 35-45% homologous to the probe will be obtained.
- tissue can be used as the source for the genomic DNA encoding members of the inorganic-ion receptor family.
- the most preferred source is tissues which express elevated levels of the desired
- inorganic-ion receptor family member In the present invention, oocyte injection and two-electrode whole oocyte voltage clamping was used to identify expression from such a tissue source.
- inorganic-ion receptor sequence As a probe in northern blot or in situ hybridization procedures, thus eliminating the necessity of the procedures employed to clone the first member of this family and eliminating the need to obtain RNA from a tissue which expresses elevated levels of
- the present invention further provides methods of identifying cells or tissues which express a member of the inorganic-ion receptor family.
- a probe comprising the DNA sequence, for example, of BoPCaR 1, a fragment thereof, or a DNA sequence encoding another member of the inorganic-ion receptor family of proteins can be used as a probe or amplification primer to detect cells which express a message homologous to the probe or primer.
- One skilled in the art can readily adapt currently available nucleic acid
- amplification or detection techniques so that it employs probes or primers based on the sequences encoding a member of the inorganic-ion receptor family.
- these receptors may be cloned in a manner analogous to that described above for the
- mRNA from human osteoclastoma tissue encodes the osteoclast calcium receptor ( Figure 34).
- Figure 34 the osteoclast calcium receptor
- the preferred receptors for drug screening are of human origin.
- a clone encoding a receptor from one species may be used to obtain the corresponding human cDNA clone by
- the clone of the parathyroid cell or other cell receptor allows isolation of genes encoding similar inorganic-ion sensing proteins in other cells, and expression of those proteins. This is achieved by a variety of approaches. Southern blot analysis of human genomic DNA, utilizing the Ca 2+ receptor cDNA as a hybridization probe, will give an indication of the number of related sequences encoded within the genome; hybridization at varying
- TGW Targeted gene walking
- PCR polymerase chain reaction
- TGW can amplify DNA adjacent to one such site.
- TGW can serve as a replacement for conventional cloning and library screening methods for isolating sequences upstream or downstream from known sequences. The procedure can be used to isolate genes from any starting DNA template for which a limited amount of sequence information is known.
- the targeted primer is a sequence-specific primer exactly complementary to a known sequence on the DNA
- the walking primers are non-specific sequences not complementary to DNA near the target primer.
- the walking primers can be any oligonucleotides unrelated to the target primer sequence.
- products are produced only when a walking primer anneals to a DNA strand contiguous with and complementary to the strand to which the targeted primer has hybridized.
- the PCR products of interest are preferably within the 5 kilobase size range.
- Amplification products are produced with as many as 60% mismatched nucleotides within the walking primer relative to DNA template. Perfect base-pairing is required only for the first two 3' nucleotides of the walking primer, but partial homology is tolerated otherwise.
- Annealing temperature is a key variable in determining the number of PCR products, as identified by agarose gel electrophoresis.
- an oligomer extension assay is performed using an "internal detection primer.” This primer
- the internal detection primer is kmased with 32 P-gamma-ATP, then used in a
- bands identified in the oligomer extension assay are excised from the gel, and reamplified by standard PCR using target primer and the walking primer that produced the band initially. This new PCR band is then sequenced directly to provide previously unknown sequence information.
- codon degeneracy in the genetic code more than one codon exists for almost all the amino acids (except tryptophan and methionine). Moreover, the frequency of usage of any particular codon is different in non-humans as compared to humans. Taking into account codon degeneracy and
- oligonucleotides are synthesized. Moreover, oligonucleotides with various permutations of possible codons are also synthesized. To avoid an excessive number, not all possible sequences resulting from the degeneracy of the code need be synthesized. Rather, a subset of codons are chosen which have the highest frequency of occurrence.
- Novel receptor clones so obtained can be assessed functionally by expression, either in oocytes or in
- Transfected cell lines expressing a cell-specific inorganic-ion receptor can then provide a means of high-throughput screening for molecules that act specifically on the ion-sensing mechanism of, for example, osteoclasts or juxtaglomerular cells.
- the calcium receptor can be cloned by expression in eukaryotic cells.
- a cDNA library can be prepared from parathyroid mRNA and cloned into a eukaryotic expression vector such as, pCDNA1. Subpools from this library can be transfected into eukaryotic cells such as COS7 or HEK293 cells resulting in relatively high-level transient expression of encoded cDNA sequences. Cells transfected with a function calcium receptor clone will express the calcium receptor which can then be activated by calcium, neomycin or other calcimimetic compounds. If cells are first loaded with a fluorometric indicator for [Ca 2+ ] i , activation of the calcium
- library subpools containing the calcium receptor are identified by their ability, upon transfection into eukaryotic cells, to induce a calcium or calcimimetic-specific increase in fluorescence. This fluorescence can be detected using either a fluorimeter or a fluorescence-activated cell sorter
- cDNA clones from a bovine parathyroid cDNA library (e.g., subfractions or pools from a library prepared in pCDNAl) and are assayed for their ability to trap
- the monolayers undergo emulsion autoradiography and cells that have trapped
- the calcium receptors appear to be functionally related to a class of receptors which utilize so-called "G” proteins to couple ligand binding to mtracellular signals. Such "G-coupled” receptors may elicit increases in
- mtracellular cyclic AMP due to the stimulation of adenylyl cyclase by a receptor activated "G " protein, or else may elicit a decrease in cyclic AMP due to inhibition of adenylyl cyclase by a receptor activated "G.” protein.
- G-coupled receptors are structurally related, having seven conserved transmembrane domains. A number of such receptors have been cloned based on sequence homology to previously cloned receptors.
- One particularly useful approach is to employ degenerate primers homologous to the conserved transmembrane domain coding regions and to amplify DNA regions encoding these sequences using polymerase chain reaction (PCR).
- PCR polymerase chain reaction
- Calcium receptors may also be cloned by such a PCR approach.
- Two examples of degenerate oligonucleotide primer pairs which can be used to PCR amplify sequences encoding calcium receptors are given below. The first pair is based on the cross-homology exhibited by the majority of G-coupled
- the second primer pair is based on
- G-coupled receptors which includes the calcitonin, secretin,
- each amplified sequence can be used as a probe
- receptor can be cloned by use of a monoclonal antibody generated against the receptor.
- Monoclonal antibodies provide powerful tools for the immunoaffinity purification of specific proteins. Once purified, limited amino acid sequence data can be obtained from the protein of interest, and used to design oligonucleotide sequence probes to screen for clones of the complete cDNA sequence.
- Purified, dispersed cells are obtained, and live or fixed cell preparations are injected intraperitoneally into the appropriate mouse strain, according to established
- hybridomas A two-step screening procedure is used to identify hybridomas secreting monoclonal antibodies that recognize the Ca 2+ receptor. The initial screen will identify those monoclonals that recognize parathyroid cell surface antigens. Immunohistochemical techniques are then used to screen hybridoma supernatants for the presence of mouse antibodies that bind to the surface of parathyroid cells. This screen can be performed on fixed sections of parathyroid gland tissue, or on dispersed cells in primary culture. The techniques for this assay are well established in the literature.
- This screen will identify hybridomas producing monoclonal antibodies to a variety of cell-surface
- the appropriate monoclonal antibody is then used for purification of the Ca 2+ receptor protein by immunoaffinity chromatography, following standard techniques. Sufficient quantities of protein are obtained to allow limited amino acid sequence determination. Degenerate oligonucleotide probes are then designed on the basis of the peptide sequence information.
- probes are then used to screen parathyroid gland cDNA libraries for full-length clones of the Ca 2+ receptor.
- Clones obtained are characterized by DNA sequencing and by functional expression in the oocyte system and in cultured mammalian cell lines.
- the antibodies can be used to screen expression libraries, e.g., cDNA libraries in ⁇ gtll or its equivalent, to determine those clones expressing antigenically reactive protein. Such clones can then be sequenced to determine whether they encode a protein that might be a Ca 2+ receptor.
- phage display libraries can be used to clone and analyze calcium receptors in place of monoclonal antibodies.
- antibody-variable regions or random peptides are shotgun cloned into phage expression vectors such that the antibody regions or peptides are displayed on the surface of the phage particle.
- Phage(s) which display antibody regions or peptides capable of high specific binding to calcium receptors will bind to cells which display these receptors (e.g., parathyroid cells, C-cells, osteoclasts, etc.).
- Hundreds of millions of such phage can be panned against these cell types preferentially selecting those phage which can bind to these cells (which includes those phage binding to calcium receptors). In this manner, the complexity of the library can be vastly
- kits to prepare such phage- display libraries are commercially available (e.g., Stratacyte, or Cambridge Antibody
- Recombinant phage endowed with such calcium receptor-binding properties can also be used in lieu of monoclonal antibodies in the various analyses of calcium receptors.
- Such phage can also be used in high throughput binding-competition screens to identify organic compounds capable of functional binding to calcium receptors which can serve as structural leads for the development of human therapeutics acting at the calcium receptor.
- affinity cross-linking of radioligands to their receptors can be used to isolate the receptor protein as described by Pilch & Czech, 1
- Nonspecific labelling is kept to a minimum by cross-linking in the presence of unlabeled polycations and di- and trivalent cations. At high concentrations of these molecules nonspecific interactions of the label with the cell surface might be reduced.
- the invention provides isolated nucleic acid sequences encoding inorganic-ion receptors and the isolated receptors themselves. It also provides unique fragments of the foregoing.
- isolated refers to a nucleic acid sequence: (i) amplified in vitro by, for example, polymerase chain reaction (PCR); (ii) synthesized by, for example, chemical synthesis; (iii) recombinantly produced by cloning; or (iv) purified, as by cleavage and gel separation.
- isolated when used in descriptions of polypeptide or amino acid sequences refers to polypeptides resulting from an expression system using the isolated nucleic acid sequences of the invention, as well as polypeptides
- unique fragments of inorganic-ion receptors are also included within the scope of the invention.
- unique fragments refers to portions of the receptor that find no counterpart in known sequences as of the date of this invention. These polypeptide fragments can be readily identified as unique by scanning protein databases known as of the time of the invention for identical peptides. In addition to generating fragments of receptors from
- fragments can be generated directly from the intact
- Proteins are specifically cleaved by proteolytic enzymes, including, but not limited to, trypsin,
- chymotrypsin or pepsin.
- Trypsin catalyzes the hydrolysis of peptide. bonds whose carbonyl group is from a basic amino acid, usually arginine or lysine.
- Pepsin and chymotrypsin catalyze the hydrolysis of peptide bonds from aromatic amino acids, particularly tryptophan, tyrosine and phenylalanine.
- Alternate sets of cleaved polypeptide fragments are generated by preventing cleavage at a site which is susceptible to a proteolytic enzyme. For example, reaction of the ⁇ -amino groups of lysine with
- Polypeptides also can be modified to create peptide linkages that are susceptible to proteolytic enzyme catalyzed
- fragments can be synthesized using an appropriate solid state synthetic procedure.
- the fragments may be used in assays, assays, assays, assays, assays, assays, assays, assays, assays
- fragments in the production of antibodies and the like.
- the fragments also may be selected to have desirable biological activities.
- the fragment may include just the binding site, or a site which binds to agonists or antagonists (e.g. of calcium), as described herein.
- agonists or antagonists e.g. of calcium
- Such fragments are readily identified by those of ordinary skill in the art using routine methods to detect specific binding to the fragment.
- a fragment to be tested can be expressed, using recombinant DNA methodology, from a fragment of the gene encoding the recombinant receptor.
- This fragment is then contacted with calcium or another chemical under appropriate association conditions to determine whether the calcium binds to the fragment.
- These fragments are useful in screening assays for agonists and antagonists of calcium, and for therapeutic effect where it is useful to remove calcium from serum, or other bodily tissues.
- fragments include those that have only the external portion, membrane-spanning portion, or mtracellular portion of the receptor . These portions are readily identified by comparison of the amino acid sequence of the receptor with those of known receptors, or by other standard methodology. These fragments are useful for forming chimeric receptors with fragments of other receptors so that a cell lacking a receptor may be formed with an mtracellular portion which performs a desired function within that cell, and an extracellular portion which causes that cell to respond to the presence of ions, or those agonists or antagonists described herein. Such chimeric receptor genes when appropriately formulated are useful genetic therapies for a variety of diseases involving dysfunction of receptors or where modulation of receptor function provides a desirable effect in the patient.
- chimeric receptors can be constructed such that the mtracellular domain is coupled to a desired enzymatic process which can be readily detected by colorometric, radiometric luminometric, spectrophotometric or fluorometric assays and is activated by interaction of the extracellular portion with its native ligand (e.g. calcium) or agonists and or antagonists of the invention.
- Cells expressing such chimeric receptors are the basis for facilitated screens for the discovery of new agonists and/or antagonists of the invention.
- the invention also features muteins or analogs and other derivatives of isolated receptors, as described herein.
- the invention embraces not only naturally occurring proteins, but also such derivatives.
- derivatives have the desired receptor activity described herein and are generally identified by methods described herein. While examples of such proteins, and genes encoding them, are provided, these examples are not limiting in the invention but demonstrate only the variation that can be associated with such genes and proteins. Generally, the gene will have the amino acid sequence of the native
- amino acids may be deleted, added or substituted. In more conserved regions, which are required for receptor activity, amino acids may be more conservatively
- one or more amino acid residues within the sequence can be substituted by another amino acid of a similar polarity which acts as a functional
- Substitutes for an amino acid within the sequence may be selected from other members of the class to which the amino acid belongs.
- the non-polar (hydrophobic) amino acids include alanine, leucine, isoleucine, valine, proline, phenylalanine, tryptophan and methionine.
- the polar neutral amino acids include glycine, serine,
- the positively charged (basic) amino acids include arginine, lysine and histidine.
- the negatively charged (acidic) amino acids include asparatic acid and glutamic acid.
- receptor proteins or unique fragments or derivatives thereof which are differentially modified during or after translation, e.g., by phosphorylation, glycosylation, crosslinking, acylation, proteolytic cleavage, linkage to an antibody molecule, membrane molecule or other ligand,
- recombinant nucleic acid sequences of the invention may be engineered so as to modify
- the coding sequence may be combined with a promoter sequence and/or a ribosome binding site using well characterized methods, and thereby facilitate improve expression and bioavailability.
- a given recombinant coding sequence can be mutated in vitro or in vivo, to create variations in coding regions and/or form new restriction endonuclease sites or destroy preexisting ones, to
- mutagenesis Any technique for mutagenesis known in the art can be used including, but not limited to, in vitro site-directed mutagenesis (Hutchinson, et al., 1978, J. Biol. Chem. 253:6551), use of TAB®
- codons may be modified such that while they encode an identical amino acid, that codon may be a preferred codon in the chosen expression system.
- the invention also provides unique fragments of nucleic acid encoding an inorganic-ion receptor.
- unique fragments refers to portions of the nucleic acid that find no identical counterpart in known sequences as of the date of this invention. These fragments can be
- the invention further provides receptor binding agents including antibodies and/or fragments thereof which can be conjugated to a toxin moiety, or expressed along with a toxin moiety as a recombinant fusion protein.
- the toxin moiety will bind to and enter a target cell using
- the toxic moiety to which the agent, antibody and/or fragment is conjugated can be a protein such as, for example, pokeweed anti-viral protein, ricin, gelonin, abrin, diphtheria exotoxin, or Pseudomonas exotoxin.
- the toxin moiety can also be a high energy-emitting radionuclide such as cobalt-60.
- the chemical structure of the toxin moiety is not intended to limit the scope of the invention in any way. Those of ordinary skill in the art will recognize that a large variety of possible moieties can be linked to the binding agents. See, for example, "Conjugate Vaccines",
- the conjugation of the binding agent to another moiety can be accomplished by any chemical reaction that will bind the two molecules so long as both molecules retain their respective activity.
- This linkage can include many chemical mechanisms, for instance covalent binding, affinity binding, intercalation,
- the preferred binding is, however, covalent binding.
- the covalent binding can be achieved either by direct condensation of existing side chains or by the incorporation of external bridging
- bivalent or polyvalent linking agents are useful in coupling protein molecules, such as an antibody, to other molecules.
- representative coupling agents can include organic compounds such as thioesters, carbodiimides, succinimide esters, diisocyanates,
- Immunotoxins Hybrid molecules combining high specificity and potent cytotoxicity. Immunological Reviews 62:185-216; and Vitetta et al., supra).
- the present invention provides for target cells including mammalian target cells which are engineered to express inorganic-ion receptors.
- target cells including mammalian target cells which are engineered to express inorganic-ion receptors.
- the genes for such receptors cloned according to the methods set forth above, may be inserted into cells which naturally express the receptors such that the recombinant gene is expressed at much higher levels.
- the present invention also provides for
- inorganic-ion receptors, fragments, or derivatives thereof may be either supplied to the system or produced within the system.
- model systems could be used to study the effects or cell function of receptor excess or depletion.
- the experimental model systems may be used to study the effects in cell or tissue cultures, in whole animals, or in particular cells or tissues within whole animals or tissue culture systems, or over specified time intervals (including during embryogenesis).
- a preferred embodiment is assays involving the cloned receptors or parts thereof, including particularly those useful in high through-put drug screening assays.
- a recombinant gene may be used to inactivate the endogenous gene by homologous recombination, and thereby create an inorganic-ion receptor deficient cell, tissue, or animal.
- a recombinant gene may be engineered to contain an insertional mutation (e.g.. the neo gene) which, when inserted into the genome of a recipient cell, tissue or animal, inactivates
- Such a construct may be introduced into a cell, such as an embryonic stem cell, by a technique such as transfection, transduction, injection, etc. Stem cells lacking an intact receptor sequence may generate transgenic animals deficient in the receptor.
- transgenic animal is an animal having cells that contain DNA which has been artificially inserted into a cell, which DNA becomes part of the genome of the animal which develops from that cell.
- Preferred transgenic animals are primates, mice, rats, cows, pigs, horses, goats, sheep, dogs and cats.
- the transgenic DNA may encode for human inorganic-ion receptors.
- native expression in an animal may be reduced by providing an amount of anti-sense RNA or DNA effective to reduce expression of the receptor.
- DNA can be injected into the pronucleus of a fertilized egg before fusion of the male and female
- Embryos can be infected with viruses, especially retroviruses, modified to carry inorganic-ion receptor nucleotide sequences of the invention.
- Pluripotent stem cells derived from the inner cell mass of the embryo and stabilized in culture can be manipulated in culture to incorporate nucleotide sequences of the invention.
- a transgenic animal can be produced from such cells through implantation into a blastocyst that is implanted into a foster mother and allowed to come to term.
- Animals suitable for transgenic experiments can be obtained from standard commercial sources such as Charles River (Wilmington, MA), Taconic (Germantown, NY), Harlan Sprague Dawley (Indianapolis, IN), etc.
- mice are induced to superovulate.
- Females are placed with males, and the mated females are sacrificed by CO, asphyxiation or cervical dislocation and embryos are recovered from excised oviducts. Surrounding cumulus cells are removed. Pronuclear embryos are then washed and stored until the time of injection. Randomly cycling adult female mice are paired with vasectomized males. Recipient females are mated at the same time as donor females. Embryos then are transferred surgically.
- transgenic rats The procedure for generating transgenic rats is similar to that of mice. See Hammer et al., Cell,
- the gene encoding neomycin resistance is physically linked to the sequence(s) of the invention.
- DNA molecules introduced into ES cells can also be integrated into the chromosome through the process of homologous recombination.
- Capecchi Science, 244: 1288-1292 (1989).
- Methods for positive selection of the recombination event (i.e., neo resistance) and dual positive-negative selection (i.e., neo resistance and gancyclovir resistance) and the subsequent identification of the desired clones by PCR have been described by Capecchi, supra and Joyner et al., Nature, 338: 153-156 (1989), the teachings of which are incorporated herein.
- the final phase of the procedure is to inject targeted ES cells into blastocysts and to transfer the blastocysts into pseudopregnant females.
- the resulting chimeric animals are bred and the offspring are analyzed by Southern blotting to identify individuals that carry the transgene.
- HPT Primary hyperparathyroidism
- the Ca 2+ receptor constitutes a discrete
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Abstract
Description
Claims
Priority Applications (9)
Application Number | Priority Date | Filing Date | Title |
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AT93907015T ATE267009T1 (en) | 1993-02-23 | 1993-02-23 | CALCIUM RECEPTOR ACTIVE MOLECULES |
DE69333527T DE69333527T2 (en) | 1993-02-23 | 1993-02-23 | CALCIUM RECEPTACTIVE MOLECULES |
AU37770/93A AU3777093A (en) | 1993-02-23 | 1993-02-23 | Calcium receptor-active molecules |
EP93907015A EP0637237B1 (en) | 1993-02-23 | 1993-02-23 | Calcium receptor-active molecules |
PCT/US1993/001642 WO1994018959A1 (en) | 1993-02-23 | 1993-02-23 | Calcium receptor-active molecules |
KR1019940701319A KR100296899B1 (en) | 1993-02-23 | 1993-02-23 | Calcium receptor active molecule |
RU94036778A RU2146132C1 (en) | 1993-02-23 | 1993-02-23 | Pharmaceutical composition showing activity with respect to calcium receptor, method of patient treatment, method of analysis of compound exhibiting effect on activity of inorganic ion receptor, receptor-encoding nucleic acid, calcium receptor |
JP50994894A JP4143118B2 (en) | 1993-02-23 | 1993-02-23 | Calcium receptor activating molecule and related substances |
HK98113873A HK1012560A1 (en) | 1993-02-23 | 1998-12-17 | Calcium receptor-active molecules. |
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PCT/US1993/001642 WO1994018959A1 (en) | 1993-02-23 | 1993-02-23 | Calcium receptor-active molecules |
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JP (1) | JP4143118B2 (en) |
KR (1) | KR100296899B1 (en) |
AT (1) | ATE267009T1 (en) |
AU (1) | AU3777093A (en) |
DE (1) | DE69333527T2 (en) |
HK (1) | HK1012560A1 (en) |
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- 1993-02-23 DE DE69333527T patent/DE69333527T2/en not_active Expired - Lifetime
- 1993-02-23 RU RU94036778A patent/RU2146132C1/en active Protection Beyond IP Right Term
- 1993-02-23 JP JP50994894A patent/JP4143118B2/en not_active Expired - Lifetime
- 1993-02-23 AU AU37770/93A patent/AU3777093A/en not_active Abandoned
- 1993-02-23 EP EP93907015A patent/EP0637237B1/en not_active Expired - Lifetime
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Also Published As
Publication number | Publication date |
---|---|
ATE267009T1 (en) | 2004-06-15 |
RU2146132C1 (en) | 2000-03-10 |
JPH07506380A (en) | 1995-07-13 |
DE69333527T2 (en) | 2005-06-16 |
DE69333527D1 (en) | 2004-06-24 |
EP0637237A1 (en) | 1995-02-08 |
KR100296899B1 (en) | 2001-10-24 |
RU94036778A (en) | 1996-05-20 |
JP4143118B2 (en) | 2008-09-03 |
AU3777093A (en) | 1994-09-14 |
EP0637237B1 (en) | 2004-05-19 |
HK1012560A1 (en) | 1999-08-06 |
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