Error in reading heatmap.zip file #159
Description
Using gitools-2.3.1 on Mac 10.11.6 and Java 8 Update 131.
Opening the following tab-separated data with 26 events provides the expected heatmap:
patient gene status event
A5O gene1 negative 1
A5O gene2 negative 1
A5O gene3 negative 1
A5O gene4 negative 1
A5P gene5 negative 1
A5P gene2 negative 1
A5P gene4 negative 1
A60 gene1 negative 1
A60 gene6 negative 1
A60 gene7 negative 1
A60 gene8 negative 1
A60 gene2 negative 1
A60 gene3 negative 1
A60 gene9 negative 1
A61 gene1 negative 1
A61 gene10 negative 1
A61 gene11 negative 1
A61 gene12 negative 1
A61 gene5 negative 1
A61 gene13 negative 1
A61 gene8 negative 1
A61 gene2 negative 1
A61 gene9 negative 1
A63 gene12 negative 1
A63 gene2 negative 1
A63 gene4 negative 1
When I save the file as a heatmap.zip the heatmap has added many more events:
The data.tdm.gz file within the heatmap.zip, however, still only shows the original 26 events
"column" "row" "status" "event"
A5O gene1 1 1
A5O gene2 1 1
A5O gene3 1 1
A5O gene4 1 1
A5P gene2 1 1
A5P gene4 1 1
A5P gene5 1 1
A60 gene1 1 1
A60 gene2 1 1
A60 gene3 1 1
A60 gene6 1 1
A60 gene7 1 1
A60 gene8 1 1
A60 gene9 1 1
A61 gene1 1 1
A61 gene2 1 1
A61 gene5 1 1
A61 gene8 1 1
A61 gene9 1 1
A61 gene10 1 1
A61 gene11 1 1
A61 gene12 1 1
A61 gene13 1 1
A63 gene2 1 1
A63 gene4 1 1
A63 gene12 1 1
This is a bit troubling.