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Abundance Model Accounting for Detection and Availability from Bird Point Counts

General description

Point counts at ~79 sites with most visited on two occasions in 2015 and 2 additional occasions in 2016 (4 closed periods for an open population model). At each visit, three time bins of 3 min, 2 min, and 5 min were used with only new birds recorded in each bin. Birds were counted in three distance bins of approximately 50, 100, and 150 m.

Use

The updated way to run the scripts in this repo will be:

  1. Data prep

  2. JAGS analysis

  3. Output organization

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Analysis of point count data for separating detection and activity

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