blab / ncov-usa-mig Public

Analysis of SARS-CoV-2 Surveillance Sequences Across the United States

Notifications

Name		Name	Last commit message	Last commit date
Latest commit History 25 Commits
.github		.github
.snakemake		.snakemake
profile		profile
scripts		scripts
sim		sim
test-scripts		test-scripts
test_data		test_data
.gitignore		.gitignore
CLAUDE.md		CLAUDE.md
Meta_Exploration.html		Meta_Exploration.html
Meta_Exploration.rmd		Meta_Exploration.rmd
README.md		README.md
Rplot.png		Rplot.png
Rplots.pdf		Rplots.pdf
Snakefile		Snakefile
all_600cutoff.jpeg		all_600cutoff.jpeg
batch_analysis.sh		batch_analysis.sh
config.yaml		config.yaml
last.dump.rda		last.dump.rda
slurm-15511982.out		slurm-15511982.out
tree_snapshots.json		tree_snapshots.json