Repositories list

• PyCorrectedEmissionCT

  Public
  Physically corrected projectors for X-ray induced emission CT.

  tomographyfluorescencediffraction+ 2xrf-ctxrd-ct

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •3•7•2•1•Updated May 22, 2025May 22, 2025

• flexCALC

  Public
  CT data pre- and post-processing tools, simulation of spectral data, and batch-processing of large number of datasets

  Python

  •

  Other

  •4•2•0•0•Updated Feb 5, 2025Feb 5, 2025

• INTACT_blender

  Public
  Python

  •

  GNU General Public License v3.0

  •1•0•0•0•Updated Dec 9, 2024Dec 9, 2024

• flexTOMO

  Public
  ASTRA-based cone beam tomography reconstructions

  Python

  •

  Other

  •5•7•1•1•Updated Sep 13, 2024Sep 13, 2024

• flexDATA

  Public
  I/O routines for CT data

  tomographyx-rayastra-toolbox

  Python

  •

  GNU General Public License v3.0

  •5•6•2•0•Updated Sep 13, 2024Sep 13, 2024

• PresentationJupyterNB

  Public template
  Template for Jupyter Notebook presentation

  HTML

  •0•0•0•0•Updated Sep 12, 2024Sep 12, 2024

• mac-migs-tutorial

  Public
  This is a short tutorial on applications of PyTorch in computational workflows making use of accelerated numerics and automatic differentiation. Here we look into analyzing and solving inverse problems as a case study.

  Jupyter Notebook

  •

  Creative Commons Zero v1.0 Universal

  •0•1•0•0•Updated Sep 5, 2024Sep 5, 2024

• flexbox

  Public archive
  A few modules that can be used to import data from the FlexRay machine and run some quick reconstruction scripts.

  Python

  •

  GNU General Public License v3.0

  •4•4•2•0•Updated Mar 1, 2024Mar 1, 2024

• WalnutReconstructionCodes

  Public
  Python and MATLAB scripts for computing reconstruction from an openly available X-ray data set

  Python

  •

  MIT License

  •17•51•0•0•Updated Aug 17, 2023Aug 17, 2023

• xCTing_training

  Public
  Python notebooks for xCTing training event "Mathematics of Tomography"

  HTML

  •1•0•0•0•Updated Mar 29, 2022Mar 29, 2022

• IP_and_Im_Lectures

  Public
  10 Lectures on Inverse Problems and Imaging

  TeX

  •33•0•0•0•Updated Feb 21, 2022Feb 21, 2022

• plenoptomos

  Public
  Plenoptic imaging reconstruction tools

  optimizationtomographyreconstruction+ 3computational-photographylight-fieldplenoptic

  Python

  •

  GNU General Public License v3.0

  •2•7•0•0•Updated Dec 6, 2021Dec 6, 2021

• PyRMLSeg

  Public
  Relaxed multi-levelset segmentation package, with tomographically consistent refinement.

  refinementtomographyimage-segmentation+ 3levelsetdenoisingchambolle-pock

  Python

  •

  MIT License

  •1•0•0•0•Updated Nov 24, 2021Nov 24, 2021

• applect-dataset-project

  Public
  Includes scripts supporting the AppleCT Dataset paper.

  Python

  •

  MIT License

  •1•5•0•0•Updated Mar 26, 2021Mar 26, 2021

• RECAST3D

  Public
  Real-time visualization tool for tomographic data.

  visualizationopengltomography

  C++

  •

  GNU General Public License v3.0

  •9•27•0•0•Updated May 29, 2020May 29, 2020

• TomoPackets

  Public archive
  This repository has moved to:

  distributedtomographymessage-passing

  C++

  •

  GNU General Public License v3.0

  •6•2•0•2•Updated Mar 27, 2020Mar 27, 2020

• SliceRecon

  Public archive
  This repository has moved to:

  algorithmgpu-computingtomography

  C++

  •

  GNU General Public License v3.0

  •4•6•5•0•Updated Mar 27, 2020Mar 27, 2020

• cookiecutter-cicwi

  Public
  Cookiecutter template for Python packages at CI CWI.

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •4•0•0•0•Updated May 17, 2019May 17, 2019

• software-guides

  Public
  Guides for the development and distribution of software projects from the CI group of CWI.

  Makefile

  •3•4•0•0•Updated Nov 22, 2018Nov 22, 2018

• Tomos

  Public
  Toolbox for tomographic reconstruction

  C++

  •

  GNU General Public License v3.0

  •5•3•0•0•Updated Oct 2, 2018Oct 2, 2018

• PDM

  Public
  Projection distance minimization segmentation technique for tomographic images

  Python

  •

  GNU General Public License v3.0

  •1•0•0•0•Updated Jun 28, 2017Jun 28, 2017

• seashell_project

  Public
  Seashell project with Naturalis

  Python

  •

  MIT License

  •1•0•0•0•Updated May 1, 2017May 1, 2017