Repositories list

• SIMPLI

  Public
  SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.

  life-sciences-imagegatingmcd+ 15ome-tiffimchistologyimage-analysis-workflowstissue-classificationcell-segmentationbioimage-informatics+ 8

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  Other

  •5•38•0•0•Updated Sep 23, 2025Sep 23, 2025

• Kandinsky

  Public
  rspatialproteomics+ 4omicstranscriptomicsimagingneighbourhoods

  HTML

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  GNU General Public License v3.0

  •0•4•0•0•Updated Apr 28, 2025Apr 28, 2025

• sysSVM2

  Public
  New version of sysSVM, for pan-cancer use

  R

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  Other

  •0•8•2•0•Updated May 21, 2021May 21, 2021

• sysSVM

  Public
  R

  •2•6•0•0•Updated Aug 13, 2019Aug 13, 2019

• useful_commands

  Public
  Notes of useful commands that might be forgotten by an average human

  0•2•0•0•Updated Jul 23, 2019Jul 23, 2019

• ciccalab.github.io

  Public
  Francesca Ciccarelli Cancer Systems Biology Laboratory

  HTML

  •0•1•0•0•Updated Jan 23, 2019Jan 23, 2019

• MEGA

  Public
  R

  •4•8•0•0•Updated Feb 1, 2017Feb 1, 2017