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feature-requestRequest for a new pipeline featureRequest for a new pipeline feature
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Currently, only the BSJs are detected and quantified, without knowing the exact sequences. There are several tools which can obtain the full length circRNA sequence from paired-end data listed below. Unfortunately, none of these tools can process single-end data.
We should then create a parameter for switching between BSJ level and Isoform level discovery.
### Tasks
- [ ] https://github.com/nf-core/circrna/issues/133
- [ ] https://github.com/nf-core/circrna/issues/134
- [ ] https://github.com/nf-core/circrna/issues/135
- [ ] https://github.com/nf-core/circrna/issues/136
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feature-requestRequest for a new pipeline featureRequest for a new pipeline feature