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23 followers · 40 following

Achievements

Achievement: Pull Sharkx2Achievement: QuickdrawAchievement: StarstruckAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pull Sharkx2Achievement: QuickdrawAchievement: StarstruckAchievement: Arctic Code Vault Contributor

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PSSUN/README.md

👨🏻‍🔬 About me:

🔎 Research experience

  • In spatial omics data, the spatial expression patterns of key molecules, including but not limited to genes and proteins. (eg. STMiner)
  • Integrating and mining spatial multi-omics data using deep learning. (eg. SpatialCOC)
  • How alterations in biological sequences influence downstream functions.

📃 Selected publications

[1] Sun P, Bush S J, Wang S, et al. STMiner: Gene-centric spatial transcriptomics for deciphering tumor tissues[J]. Cell Genomics, 2025, 5(2). (Featured content)
[2] Sun P, Li G. CircCode: a powerful tool for identifying circRNA coding ability[J]. Frontiers in genetics, 2019, 10: 981.

🎯 Work on

STMiner

⌨️ Actions

PSSUN's github activity graph

🚀 Github Overview

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📱 Social media

📑 ORCID:

  ORCID iD icon https://orcid.org/0000-0003-0796-2133

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  1. xjtu-omics/STMiner xjtu-omics/STMiner Public

    Python 15 7

  2. xjtu-omics/SpatialCOC xjtu-omics/SpatialCOC Public

    SpaKnit is a multimodal integration framework for spatial multi-omics data.

    Jupyter Notebook 6

  3. STMiner2 STMiner2 Public

    Forked from xjtu-omics/STMiner

    Python 1

  4. CircCode CircCode Public

    A Python3-base pipeline for translated circular RNA(circRNA) identification

    Python 17 5

  5. STMiner-test-data STMiner-test-data Public

    Jupyter Notebook

点击 这是indexloc提供的php浏览器服务，不要输入任何密码和下载