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GPR84

This repository provides the input and output of the MD simulations for the paper:

Mechanistic insight into signal bias by the agonist-dependent conformational dynamics of GPR84

Shota Suzuki 1*, Duy Phuoc Tran2, Koki Nishikawa3, Akio Kitao2, Yoshinori Fujiyoshi1*

1 Advanced Research Initiative, Institute of Integrated Research, Institute of Science Tokyo, 1-5-45 Yushima Bunkyo-ku, 113–8510, Tokyo, Japan

2 School of Life Science and Technology, Institute of Science Tokyo, 2-12-1 Ookayama, Meguro-ku, 152–8550, Tokyo, Japan

3 Tokyo University of Agriculture and Technology, Tokyo 183-8538, Japan


In each folder, the file .input.gro is the initial configuration for MD simulation while the .output.1microsec.gro is among the last snapshot of 1 microsecond MD simulation.

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