default search action

combined dblp search
author search
venue search
publication search

ask others

Database - The Journal of Biological Databases and Curation, Volume 2011

> Home > Journals > Database - The Journal of Biological Databases and Curation

Refine list

refinements active!

zoomed in on ?? of ?? records

view refined list in

export refined list as

showing all ?? records

Volume 2011, 2011

Editorial

- view
  authority control:
- export record
  dblp key:
  - journals/biodb/Kasprzyk11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/Kasprzyk11
Arek Kasprzyk:
BioMart: driving a paradigm change in biological data management.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/GaudetBFSTABBBCCCCEGGGGHHIKLLKOORRRSSSTTWWY11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/GaudetBFSTABBBCCCCEGGGGHHIKLLKOORRRSSSTTWWY11
Pascale Gaudet, Amos Bairoch, Dawn Field, Susanna-Assunta Sansone, Chris F. Taylor, Teresa K. Attwood, Alex Bateman, Judith A. Blake, Carol J. Bult, J. Michael Cherry, Rex L. Chisholm, Guy Cochrane, Charles E. Cook, Janan T. Eppig, Michael Y. Galperin, Robert Gentleman, Carole A. Goble, Takashi Gojobori, John M. Hancock, Douglas G. Howe, Tadashi Imanishi, Janet Kelso, David Landsman, Suzanna E. Lewis, Ilene Karsch-Mizrachi, Sandra E. Orchard, B. F. Francis Ouellette, Shoba Ranganathan, Lorna J. Richardson, Philippe Rocca-Serra, Paul N. Schofield, Damian Smedley, Christopher Southan, Tin Wee Tan, Tatiana A. Tatusova, Patricia L. Whetzel, Owen White, Chisato Yamasaki:
Towards BioDBcore: a community-defined information specification for biological databases.

Original article

- view
  authority control:
- export record
  dblp key:
  - journals/biodb/ZhengSMLS11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/ZhengSMLS11
Jie Zheng, Julia Stoyanovich, Elisabetta Manduchi, Junmin Liu, Christian J. Stoeckert Jr.:
AnnotCompute: annotation-based exploration and meta-analysis of genomics experiments.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/TsafnatCP11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/TsafnatCP11
Guy Tsafnat, Joseph Copty, Sally R. Partridge:
RAC: Repository of Antibiotic resistance Cassettes.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/DuXLL11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/DuXLL11
Yipeng Du, Nanfang Xu, Ming Lu, Tingting Li:
hUbiquitome: a database of experimentally verified ubiquitination cascades in humans.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/HamiltonNAPTLLB11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/HamiltonNAPTLLB11
John P. Hamilton, Eric C. Neeno-Eckwall, Bishwo N. Adhikari, Nicole T. Perna, Ned Tisserat, Jan Leach, C. André Lévesque, C. Robin Buell:
The Comprehensive Phytopathogen Genomics Resource: a web-based resource for data-mining plant pathogen genomes.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/YamamotoSNFFT11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/YamamotoSNFFT11
Satoko Yamamoto, Noriko Sakai, Hiromi Nakamura, Hiroshi Fukagawa, Ken Fukuda, Toshihisa Takagi:
INOH: ontology-based highly structured database of signal transduction pathways.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/GenovaAZGMI11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/GenovaAZGMI11
Alex Di Génova, Andrés Aravena, Luis Zapata, Mauricio Gonzalez, Alejandro Maass, Patricia Iturra:
SalmonDB: a bioinformatics resource for Salmo salar and Oncorhynchus mykiss.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/HatanoCMTNYTTF11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/HatanoCMTNYTTF11
Akiko Hatano, Hirokazu Chiba, Harry Amri Moesa, Takeaki Taniguchi, Satoshi Nagaie, Koji Yamanegi, Takako Takai-Igarashi, Hiroshi Tanaka, Wataru Fujibuchi:
CELLPEDIA: a repository for human cell information for cell studies and differentiation analyses.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/NdegwaCODHVC11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/NdegwaCODHVC11
Nelson Ndegwa, Richard G. Côté, David Ovelleiro, Peter D'Eustachio, Henning Hermjakob, Juan Antonio Vizcaíno, David Croft:
Critical amino acid residues in proteins: a BioMart integration of Reactome protein annotations with PRIDE mass spectrometry data and COSMIC somatic mutations.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/HawCYNDHS11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/HawCYNDHS11
Robin Haw, David Croft, Christina K. Yung, Nelson Ndegwa, Peter D'Eustachio, Henning Hermjakob, Lincoln D. Stein:
The Reactome BioMart.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/TurnerPSABBCCDEGLLLPPQRRRRRSTWC11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/TurnerPSABBCCDEGLLLPPQRRRRRSTWC11
Charles F. Turner, Huaqin (Helen) Pan, Gregg W. Silk, Mary-Anne Ardini, Vesselina D. Bakalov, Stephanie Bryant, Susanna Cantor, Kungyen Chang, Michael DeLatte, Paul Eggers, Laxminarayana Ganapathi, Sujatha Lakshmikanthan, Joshua Levy, Sheping Li, Joseph Pratt, Norma Pugh, Ying Qin, Rebekah Rasooly, Helen Ray, Jean E. Richardson, Amanda Flynn Riley, Susan M. Rogers, Charlotte Scheper, Sylvia Tan, Stacie White, Philip C. Cooley:
The NIDDK Central Repository at 8 years - Ambition, Revision, Use and Impact.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/RajuNBRTSTPSSMGSTBPSSSACKMPHROBMSP11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/RajuNBRTSTPSSMGSTBPSSSACKMPHROBMSP11
Rajesh Raju, Vishalakshi Nanjappa, Lavanya Balakrishnan, Aneesha Radhakrishnan, Joji Kurian Thomas, Jyoti Sharma, Maozhen Tian, Shyam Mohan Palapetta, Tejaswini Subbannayya, Nirujogi Raja Sekhar, Babylakshmi Muthusamy, Renu Goel, Yashwanth Subbannayya, Deepthi Telikicherla, Mitali Bhattacharjee, Sneha M. Pinto, Nazia Syed, Srinivas Manda Srikanth, Gajanan J. Sathe, Sartaj Ahmad, Sandip N. Chavan, Ghantasala S. Sameer Kumar, Arivusudar Marimuthu, T. S. Keshava Prasad, H. C. Harsha, B. Abdul Rahiman, Osamu Ohara, Gary D. Bader, S. Sujatha Mohan, William P. Schiemann, Akhilesh Pandey:
NetSlim: high-confidence curated signaling maps.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/ZhangHBCGH0YK11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/ZhangHBCGH0YK11
Junjun Zhang, Syed Haider, Joachim Baran, Anthony Cros, Jonathan M. Guberman, Jack Hsu, Yong Liang, Long Yao, Arek Kasprzyk:
BioMart: a data federation framework for large collaborative projects.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/GubermanAA11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/GubermanAA11
Jonathan M. Guberman, Jiye Ai, Olivier Arnaiz, Joachim Baran, Andrew Blake, Richard A. Baldock, Claude Chelala, David Croft, Anthony Cros, Rosalind J. Cutts, Alex Di Génova, Simon A. Forbes, Takatomo Fujisawa, Emanuela Gadaleta, David M. Goodstein, Gunes Gundem, Bernard Haggarty, Syed Haider, Matthew Hall, Todd W. Harris, Robin Haw, Shen Hu, Simon J. Hubbard, Jack Hsu, Vivek Iyer, Philip Jones, Toshiaki Katayama, Rhoda Kinsella, Lei Kong, Daniel Lawson, Yong Liang, Núria López-Bigas, Jie Luo, Michael J. Lush, Jeremy C. Mason, François Moreews, Nelson Ndegwa, Darren J. Oakley, Christian Perez-Llamas, Michael Primig, Elena Rivkin, Steven Rosanoff, Rebecca Shepherd, Reinhard Simon, William C. Skarnes, Damian Smedley, Linda Sperling, William Spooner, Peter Stevenson, Kevin R. Stone, Jon W. Teague, Jun Wang, Jianxin Wang, Brett Whitty, David Tai Wai Wong, Marie Wong-Erasmus, Long Yao, Ken Youens-Clark, Christina K. Yung, Junjun Zhang, Arek Kasprzyk:
BioMart Central Portal: an open database network for the biological community.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/KatzHCNKAJHOFSMJ11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/KatzHCNKAJHOFSMJ11
Lee S. Katz, Jay C. Humphrey, Andrew B. Conley, Viswateja Nelakuditi, Andrey Kislyuk, Sonia Agrawal, Pushkala Jayaraman, Brian H. Harcourt, Melissa A. Olsen-Rasmussen, Michael Frace, Nitya V. Sharma, Leonard W. Mayer, I. King Jordan:
Neisseria Base: a comparative genomics database for Neisseria meningitidis.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/StevensonRVYB11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/StevensonRVYB11
Peter Stevenson, Lorna J. Richardson, Shanmugasundaram Venkataraman, Yiya Yang, Richard A. Baldock:
The BioMart interface to the eMouseAtlas gene expression database EMAGE.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/OakleyISS11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/OakleyISS11
Darren J. Oakley, Vivek Iyer, William C. Skarnes, Damian Smedley:
BioMart as an integration solution for the International Knockout Mouse Consortium.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/ZhangBCGHHLRWWWYK11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/ZhangBCGHHLRWWWYK11
Junjun Zhang, Joachim Baran, Anthony Cros, Jonathan M. Guberman, Syed Haider, Jack Hsu, Yong Liang, Elena Rivkin, Jianxin Wang, Brett Whitty, Marie Wong-Erasmus, Long Yao, Arek Kasprzyk:
International Cancer Genome Consortium Data Portal - a one-stop shop for cancer genomics data.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/MoreewsRDK11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/MoreewsRDK11
François Moreews, Gaelle Rauffet, Patrice Déhais, Christophe Klopp:
SigReannot-mart: a query environment for expression microarray probe re-annotations.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/GubelmannGMHDDRD11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/GubelmannGMHDDRD11
Carine Gubelmann, Alexandre Gattiker, Andreas Massouras, Korneel Hens, Fabrice P. A. David, Frederik Decouttere, Jacques Rougemont, Bart Deplancke:
GETPrime: a gene- or transcript-specific primer database for quantitative real-time PCR.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/Perez-LlamasGL11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/Perez-LlamasGL11
Christian Perez-Llamas, Gunes Gundem, Núria López-Bigas:
Integrative Cancer Genomics (IntOGen) in Biomart.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/WashingtonSPRCSZLCLKMMSL11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/WashingtonSPRCSZLCLKMMSL11
Nicole L. Washington, E. O. Stinson, Marc D. Perry, Peter Ruzanov, Sergio Contrino, Richard N. Smith, Zheng Zha, Rachel Lyne, Adrian Carr, Paul Lloyd, Ellen T. Kephart, Sheldon J. McKay, Gos Micklem, Lincoln D. Stein, Suzanna E. Lewis:
The modENCODE Data Coordination Center: lessons in harvesting comprehensive experimental details.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/JonesBMMH11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/JonesBMMH11
Philip Jones, David Binns, Conor McMenamin, Craig McAnulla, Sarah Hunter:
The InterPro BioMart: federated query and web service access to the InterPro Resource.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/KinsellaKHZPSASDKKF11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/KinsellaKHZPSASDKKF11
Rhoda Kinsella, Andreas Kähäri, Syed Haider, Jorge Zamora, Glenn Proctor, Giulietta Spudich, Jeff Almeida-King, Daniel M. Staines, Paul S. Derwent, Arnaud Kerhornou, Paul J. Kersey, Paul Flicek:
Ensembl BioMarts: a hub for data retrieval across taxonomic space.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/RajuBNBGMTSRHSPMBWP11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/RajuBNBGMTSRHSPMBWP11
Rajesh Raju, Lavanya Balakrishnan, Vishalakshi Nanjappa, Mitali Bhattacharjee, Derese Getnet, Babylakshmi Muthusamy, Joji Kurian Thomas, Jyoti Sharma, B. Abdul Rahiman, H. C. Harsha, Subramanian Shankar, T. S. Keshava Prasad, S. Sujatha Mohan, Gary D. Bader, Mohan R. Wani, Akhilesh Pandey:
A comprehensive manually curated reaction map of RANKL/RANK-signaling pathway.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/FischerABGHKPTKRS11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/FischerABGHKPTKRS11
Steve Fischer, Cristina Aurrecoechea, Brian P. Brunk, Xin Gao, Omar S. Harb, Eileen T. Kraemer, Cary Pennington, Charles Treatman, Jessica C. Kissinger, David S. Roos, Christian J. Stoeckert Jr.:
The strategies WDK: a graphical search interface and web development kit for functional genomics databases.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/CuttsGLC11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/CuttsGLC11
Rosalind J. Cutts, Emanuela Gadaleta, Nicholas R. Lemoine, Claude Chelala:
Using BioMart as a framework to manage and query pancreatic cancer data.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/SchaefferHGACCSL11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/SchaefferHGACCSL11
Mary L. Schaeffer, Lisa C. Harper, Jack M. Gardiner, Carson M. Andorf, Darwin A. Campbell, Ethalinda K. S. Cannon, Taner Z. Sen, Carolyn J. Lawrence:
MaizeGDB: curation and outreach go hand-in-hand.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/MurphyPWBT11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/MurphyPWBT11
Caitlin Murphy, Justin Powlowski, Min Wu, Greg Butler, Adrian Tsang:
Curation of characterized glycoside hydrolases of Fungal origin.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/ShepherdFBBCWBGJKLMBTCSF11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/ShepherdFBBCWBGJKLMBTCSF11
Rebecca Shepherd, Simon A. Forbes, David Beare, Sally Bamford, Charlotte Cole, Sari Ward, Nidhi Bindal, Prasad Gunasekaran, Mingming Jia, Chai Yin Kok, Kenric Leung, Andrew Menzies, Adam P. Butler, Jon W. Teague, Peter J. Campbell, Michael R. Stratton, P. Andrew Futreal:
Data mining using the Catalogue of Somatic Mutations in Cancer BioMart.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/HishigakiK11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/HishigakiK11
Haretsugu Hishigaki, Satoru Kuhara:
hERGAPDbase: a database documenting hERG channel inhibitory potentials and APD-prolongation activities of chemical compounds.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/GreenHSLS11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/GreenHSLS11
Jason M. Green, Jaturon Harnsomburana, Mary L. Schaeffer, Carolyn J. Lawrence, Chi-Ren Shyu:
Multi-source and ontology-based retrieval engine for maize mutant phenotypes.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/HarperSTGACCBBLS11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/HarperSTGACCBBLS11
Lisa C. Harper, Mary L. Schaeffer, Jordan Thistle, Jack M. Gardiner, Carson M. Andorf, Darwin A. Campbell, Ethalinda K. S. Cannon, Bremen L. Braun, Scott M. Birkett, Carolyn J. Lawrence, Taner Z. Sen:
The MaizeGDB Genome Browser tutorial: one example of database outreach to biologists via video.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/VisendiNBBOV11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/VisendiNBBOV11
Paul Visendi, Wanjiku Ng'ang'a, Wallace D. Bulimo, Richard Bishop, James Ochanda, Etienne Pierre de Villiers:
TparvaDB: a database to support Theileria parva vaccine development.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/WilliamsDRBOS11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/WilliamsDRBOS11
Gary Williams, Paul Davis, Anthony Rogers, Tamberlyn Bieri, Philip Ozersky, John Spieth:
Methods and strategies for gene structure curation in WormBase.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/BlankenbergCKTN11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/BlankenbergCKTN11
Daniel J. Blankenberg, Nathan Coraor, Gregory Von Kuster, James Taylor, Anton Nekrutenko:
Integrating diverse databases into an unified analysis framework: a Galaxy approach.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/YamamotoYBT11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/YamamotoYBT11
Yasunori Yamamoto, Atsuko Yamaguchi, Hidemasa Bono, Toshihisa Takagi:
Allie: a database and a search service of abbreviations and long forms.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/Sirim0WSP11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/Sirim0WSP11
Demet Sirim, Florian Wagner, Lei Wang, Rolf D. Schmid, Jürgen Pleiss:
The Laccase Engineering Database: a classification and analysis system for laccases and related multicopper oxidases.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/LiWQB11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/LiWQB11
Xin Li, Fan Wu, Feng Qi, Daniel A. Beard:
A database of thermodynamic properties of the reactions of glycolysis, the tricarboxylic acid cycle, and the pentose phosphate pathway.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/PetriSHSTPDMTJ11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/PetriSHSTPDMTJ11
Victoria Petri, Mary Shimoyama, G. Thomas Hayman, Jennifer R. Smith, Marek Tutaj, Jeff de Pons, Melinda R. Dwinell, Diane H. Munzenmaier, Simon N. Twigger, Howard J. Jacob:
The Rat Genome Database Pathway Portal.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/VellozoVBHCFCRDGSCC11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/VellozoVBHCFCRDGSCC11
Augusto F. Vellozo, Amélie S. Véron, Patrice Baa-Puyoulet, Jaime Huerta-Cepas, Ludovic Cottret, Gérard Febvay, Federica Calevro, Yvan Rahbé, Angela E. Douglas, Toni Gabaldón, Marie-France Sagot, Hubert Charles, Stefano Colella:
CycADS: an annotation database system to ease the development and update of BioCyc databases.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/Magrane11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/Magrane11
Michele Magrane:
UniProt Knowledgebase: a hub of integrated protein data.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/CostanzoPBCH11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/CostanzoPBCH11
Maria C. Costanzo, Julie Park, Rama Balakrishnan, J. Michael Cherry, Eurie L. Hong:
Using computational predictions to improve literature-based Gene Ontology annotations: a feasibility study.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/BluhmBBDPQRSYYBB11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/BluhmBBDPQRSYYBB11
Wolfgang Bluhm, Bojan Beran, Chunxiao Bi, Dimitris Dimitropoulos, Andreas Prlic, Greg B. Quinn, Peter W. Rose, Chaitali Shah, Jasmine Young, Benjamin T. Yukich, Helen M. Berman, Philip E. Bourne:
Quality assurance for the query and distribution systems of the RCSB Protein Data Bank.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/LaulederkindSHLNPSWPKLRMDTJ11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/LaulederkindSHLNPSWPKLRMDTJ11
Stanley J. F. Laulederkind, Mary Shimoyama, G. Thomas Hayman, Timothy Lowry, Rajni Nigam, Victoria Petri, Jennifer R. Smith, Shur-Jen Wang, Jeff de Pons, George Kowalski, Weisong Liu, Wes Rood, Diane H. Munzenmaier, Melinda R. Dwinell, Simon N. Twigger, Howard J. Jacob:
The Rat Genome Database curation tool suite: a set of optimized software tools enabling efficient acquisition, organization, and presentation of biological data.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/LumM11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/LumM11
Gengkon Lum, Xiang Jia Min:
FunSecKB: the Fungal Secretome KnowledgeBase.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/Milc0BP11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/Milc0BP11
Justyna Milc, Antonio Sala, Sonia Bergamaschi, Nicola Pecchioni:
A genotypic and phenotypic information source for marker-assisted selection of cereals: the CEREALAB database.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/IsserlinBB11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/IsserlinBB11
Ruth Isserlin, Rashad Badrawi, Gary D. Bader:
The Biomolecular Interaction Network Database in PSI-MI 2.5.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/HarbiKH11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/HarbiKH11
Djamel Harbi, Manish Kumar, Paul M. Harrison:
LPS-annotate: complete annotation of compositionally biased regions in the protein knowledgebase.

Database tool

- view
  authority control:
- export record
  dblp key:
  - journals/biodb/JungMRBFBSLLMBCCMM11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/JungMRBFBSLLMBCCMM11
Sook Jung, Naama Menda, Seth Redmond, Robert M. Buels, Maren Friesen, Yuri R. Bendaña, Lacey-Anne Sanderson, Hilmar Lapp, Taein Lee, Bob MacCallum, Kirstin E. Bett, Scott Cain, Dave Clements, Lukas A. Mueller, Dorrie Main:
The Chado Natural Diversity module: a new generic database schema for large-scale phenotyping and genotyping data.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/SmitaLKJPB11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/SmitaLKJPB11
Shuchi Smita, Sangram Keshari Lenka, Amit Katiyar, Pankaj Jaiswal, Justin Preece, Kailash Chander Bansal:
QlicRice: a web interface for abiotic stress responsive QTL and loci interaction channels in rice.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/FicklinSCSLCJBM11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/FicklinSCSLCJBM11
Stephen P. Ficklin, Lacey-Anne Sanderson, Chun-Huai Cheng, Margaret Staton, Taein Lee, Ilhyung Cho, Sook Jung, Kirstin E. Bett, Doreen Main:
Tripal: a construction toolkit for online genome databases.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/ShameerSMKPS11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/ShameerSMKPS11
Khader Shameer, Prashant Shingate, S. C. P. Manjunath, M. Karthika, Ganesan Pugalenthi, Ramanathan Sowdhamini:
3DSwap: curated knowledgebase of proteins involved in 3D domain swapping.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/DavisWMM11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/DavisWMM11
Allan Peter Davis, Thomas C. Wiegers, Cynthia G. Murphy, Carolyn J. Mattingly:
The curation paradigm and application tool used for manual curation of the scientific literature at the Comparative Toxicogenomics Database.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/StojmirovicY11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/StojmirovicY11
Aleksandar Stojmirovic, Yi-Kuo Yu:
ppiTrim: constructing non-redundant and up-to-date interactomes.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/HuangHVSMMABBN11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/HuangHVSMMABBN11
Yu S. Huang, Matthew Horton, Bjarni J. Vilhjálmsson, Ümit Seren, Dazhe Meng, Christopher Meyer, Muhammad Ali Amer, Justin O. Borevitz, Joy Bergelson, Magnus Nordborg:
Analysis and visualization of Arabidopsis thaliana GWAS using web 2.0 technologies.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/TaccioliMTGAELGS11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/TaccioliMTGAELGS11
Cristian Taccioli, Vincenza Maselli, Jesper Tegnér, David Gomez-Cabrero, Gioia Altobelli, Warren Emmett, Francesco Lescai, Stefano Gustincich, Elia Stupka:
ParkDB: a Parkinson's disease gene expression database.
- view
  authority control:
- export record
  dblp key:
  - journals/biodb/SridharaMBG11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/SridharaMBG11
Viswanadham Sridhara, Aron Marchler-Bauer, Stephen H. Bryant, Lewis Y. Geer:
Automatic annotation of experimentally derived, evolutionarily conserved post-translational modifications onto multiple genomes.

Review

- view
  authority control:
- export record
  dblp key:
  - journals/biodb/Lu11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/Lu11
Zhiyong Lu:
PubMed and beyond: a survey of web tools for searching biomedical literature.

Database Updates

- view
  authority control:
- export record
  dblp key:
  - journals/biodb/Marino-RamirezLMZMBL11
- ask others
- share record
  persistent URL:
  - https://dblp.org/rec/journals/biodb/Marino-RamirezLMZMBL11
Leonardo Mariño-Ramírez, Kevin M. Levine, Mario Morales, Suiyuan Zhang, Travis Moreland, Andreas D. Baxevanis, David Landsman:
The Histone Database: an integrated resource for histones and histone fold-containing proteins.

manage site settings

To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.