satijalab / seurat
R toolkit for single cell genomics
See what the GitHub community is most excited about this week.
R toolkit for single cell genomics
Call LLM APIs from R
Inferring CNV from Single-Cell RNA-Seq
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data
Make Complex Heatmaps
R Interface to Python
R toolkit for the analysis of single-cell chromatin data
R package for detecting doublets in single-cell RNA sequencing data
📊 A universal enrichment tool for interpreting omics data
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
🎓 A collection of interactive courses for the swirl R package.
R for data science: a book
Dynamic Documents for R
Fast, sensitive and accurate integration of single-cell data with Harmony
renv: Project environments for R.