A data framework for biology. Makes your data queryable, traceable, reproducible, and FAIR. One API: lakehouse, lineage, feature store, ontologies, LIMS, ELN.

Expose your FastAPI endpoints as Model Context Protocol (MCP) tools, with Auth!

A place to submit conda recipes before they become fully fledged conda-forge feedstocks

Bi-Directional Equivariant Long-Range DNA Sequence Modeling

DNA foundation modeling from molecular to genome scale

Deep Neural Networks for Analysing NMR time domain data

Machine learning metrics for distributed, scalable PyTorch applications.

pathlib api extended to use fsspec backends

The Nested Containment List for Python. Basically a static interval-tree that is silly fast for both construction and lookups.

Configuration Management for Python ⚙

Smelte template for Svelte

Grakn R&D work

Geometric Deep Learning Extension Library for PyTorch

A deep learning framework for molecular docking

Comprehensive library for fast, GPU accelerated molecular gridding for deep learning workflows

The official sources for the RDKit library

a framework for training sequence-level deep learning networks

A fast and simple framework for building and running distributed applications. Ray is packaged with RLlib, a scalable reinforcement learning library, and Tune, a scalable hyperparameter tuning libr…

A PyTorch implementation of Context Vector Data Description (CVDD), a method for Anomaly Detection on text.

MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.

Simple and efficient access to genomic data for deep learning models.

Model zoo for genomics

Fabia Biclustering Algorithm in Cython