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Suppress Jackhmmer stdout and stderr when checking whether seq_limit … Continuous Integration #47: Commit 0422023 pushed by Augustin-Zidek
July 14, 2025 16:55 5m 50s main
main
July 14, 2025 16:55 5m 50s
Suppress output from Jackhmmer seq limit check Continuous Integration #46: Pull request #470 opened by owainkenwayucl
July 14, 2025 14:33 5m 45s owainkenwayucl:main
owainkenwayucl:main
July 14, 2025 14:33 5m 45s
Add support for --seq_limit in Jackhmmer - significantly reduces peak… Continuous Integration #45: Commit 751a4b8 pushed by Augustin-Zidek
July 14, 2025 09:03 5m 50s main
main
July 14, 2025 09:03 5m 50s
Security/safe pickle loader Continuous Integration #44: Pull request #460 opened by sanowl
July 2, 2025 16:22 6m 6s sanowl:security/safe-pickle-loader
sanowl:security/safe-pickle-loader
July 2, 2025 16:22 6m 6s
Add validation of template JSON keys Continuous Integration #43: Commit a209008 pushed by Augustin-Zidek
July 2, 2025 08:56 6m 40s main
main
July 2, 2025 08:56 6m 40s
Fix the documentation for RNA MSA Continuous Integration #42: Commit 6cf8255 pushed by Augustin-Zidek
June 23, 2025 17:45 5m 53s main
main
June 23, 2025 17:45 5m 53s
Configure tests to explicitly use jax_threefry_partitionable=False. Continuous Integration #41: Commit 0f865a6 pushed by Augustin-Zidek
June 12, 2025 10:35 5m 38s main
main
June 12, 2025 10:35 5m 38s
Check that ccdCodes is a list Continuous Integration #40: Commit 344735c pushed by Augustin-Zidek
June 4, 2025 17:58 5m 49s main
main
June 4, 2025 17:58 5m 49s
Update to Ubuntu 24.04 / CUDA 12.6.3 base image and use Python 3.12 Continuous Integration #39: Commit 6472373 pushed by Augustin-Zidek
May 30, 2025 16:58 7m 23s main
main
May 30, 2025 16:58 7m 23s
Reduce the size of the Docker/Singularity container Continuous Integration #38: Commit 935d47f pushed by Augustin-Zidek
May 30, 2025 16:16 6m 17s main
main
May 30, 2025 16:16 6m 17s
Make register_dataclass compatible with JAX < v0.4.36 Continuous Integration #37: Commit 5ecdfe8 pushed by Augustin-Zidek
May 30, 2025 11:55 6m 51s main
main
May 30, 2025 11:55 6m 51s
Remove unnecessary chex dependency Continuous Integration #36: Commit 565f286 pushed by Augustin-Zidek
May 30, 2025 10:30 5m 34s main
main
May 30, 2025 10:30 5m 34s
Improve AlphaFold 3 Dockerfile Continuous Integration #35: Commit 17afe15 pushed by Augustin-Zidek
May 27, 2025 15:48 6m 33s main
main
May 27, 2025 15:48 6m 33s
Add a flag to enable skipping unpaired MSA deduplication against pair… Continuous Integration #34: Commit e64804c pushed by Augustin-Zidek
May 22, 2025 12:53 6m 14s main
main
May 22, 2025 12:53 6m 14s
Validate bonded atoms against the CCD Continuous Integration #33: Commit 6207434 pushed by Augustin-Zidek
May 19, 2025 13:43 6m 1s main
main
May 19, 2025 13:43 6m 1s
Make template featurisation error messages clearer Continuous Integration #32: Commit 0cda346 pushed by Augustin-Zidek
May 15, 2025 12:23 6m 52s main
main
May 15, 2025 12:23 6m 52s
Fix flag descriptions for save_embeddings and save_distogram Continuous Integration #31: Commit 38a9333 pushed by Augustin-Zidek
May 13, 2025 12:53 5m 42s main
main
May 13, 2025 12:53 5m 42s
Save embeddings as float16 instead of float32 to make them 2x smaller Continuous Integration #30: Commit 267ab05 pushed by Augustin-Zidek
May 13, 2025 12:07 5m 56s main
main
May 13, 2025 12:07 5m 56s
Mention unresolved residues in template documentation Continuous Integration #29: Commit 7a4a2f7 pushed by Augustin-Zidek
April 14, 2025 10:41 5m 57s main
main
April 14, 2025 10:41 5m 57s
Remove unused code Continuous Integration #28: Commit 5fbae81 pushed by Augustin-Zidek
April 9, 2025 13:16 8m 6s main
main
April 9, 2025 13:16 8m 6s
Added an option to save the distogram Continuous Integration #27: Pull request #345 synchronize by PasqM
April 7, 2025 09:19 6m 39s PasqM:save-distograms
PasqM:save-distograms
April 7, 2025 09:19 6m 39s
Use unsigned int for bias pipelining hack in Triton FlashAttention. A… Continuous Integration #26: Commit 69b749c pushed by Augustin-Zidek
March 24, 2025 10:33 5m 46s main
main
March 24, 2025 10:33 5m 46s
Do not deduplicate unpaired MSA in featurisation Continuous Integration #24: Commit 8151373 pushed by Augustin-Zidek
March 13, 2025 14:27 5m 52s main
main
March 13, 2025 14:27 5m 52s
Make pseudo_beta_fn work with both np and jnp. Continuous Integration #23: Commit 3f70628 pushed by Augustin-Zidek
March 13, 2025 11:58 5m 48s main
main
March 13, 2025 11:58 5m 48s
Added an option to save the distogram Continuous Integration #18: Pull request #345 opened by PasqM
March 11, 2025 18:45 7m 5s PasqM:save-distograms
PasqM:save-distograms
March 11, 2025 18:45 7m 5s