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An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.
Reproducibility of results/figures from omicverse paper
A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.
Cellular dynamics across aged human brains uncover a multicellular cascade leading to Alzheimer’s disease
Incorporation of conformational space profile into molecular representation learning, and its application to drug discovery, including virtual screening, target identification, and QSAR.
Compilation of R and Python programming codes on the Data Professor YouTube channel.
AI for Science 论文解读合集（持续更新ing），论文/数据集/教程下载：hyper.ai
🧑🏫 60+ Implementations/tutorials of deep learning papers with side-by-side notes 📝; including transformers (original, xl, switch, feedback, vit, ...), optimizers (adam, adabelief, sophia, ...), ga…
AppStore和GooglePlay应用为：时间朋友，英文名为：TimeFriend。爱今天用户可直接登录此应用
Message Passing Neural Networks for Molecule Property Prediction
Papers with code for single cell related papers
Customizable workflows based on snakemake and python for the analysis of NGS data
A Snakemake workflow for standardised sc/snRNAseq analysis
This is the development home of the workflow management system Snakemake. For general information, see
some scripts for analysis of MD and CADD. And some tutorials.
pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene reg…
Code and example data for running Consensus Non-negative Matrix Factorization on single-cell RNA-Seq data
The CGView Comparison Tool (CCT) is a package for visually comparing bacterial, plasmid, chloroplast, and mitochondrial sequences.
AutoDock CrankPep for peptide and disordered protein docking
My solutions to Google Code Jam 2019 in Python3
🏃 Python Solutions of All 27 Probelms in GCJ 2017
🏃 Python Solutions of All 27 Problems in GCJ 2019
Some of my Google Code Jam practice and competition code
A benchmark of batch-effect correction methods for single-cell RNA sequencing data
基于rstudio、code-server、jupyter-lab的dockerfile，用于快速搭建数据分析环境。