US20050138687A1 - Method of genetic modification of a wild type viral sequence - Google Patents
Method of genetic modification of a wild type viral sequence Download PDFInfo
- Publication number
- US20050138687A1 US20050138687A1 US10/980,146 US98014604A US2005138687A1 US 20050138687 A1 US20050138687 A1 US 20050138687A1 US 98014604 A US98014604 A US 98014604A US 2005138687 A1 US2005138687 A1 US 2005138687A1
- Authority
- US
- United States
- Prior art keywords
- virus
- sequence
- tgb
- plant
- transgenic plant
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Abandoned
Links
- 230000003612 virological effect Effects 0.000 title claims abstract description 43
- 238000000034 method Methods 0.000 title claims abstract description 31
- 238000012239 gene modification Methods 0.000 title abstract description 7
- 230000005017 genetic modification Effects 0.000 title abstract description 7
- 235000013617 genetically modified food Nutrition 0.000 title abstract description 7
- 241000700605 Viruses Species 0.000 claims abstract description 38
- 208000015181 infectious disease Diseases 0.000 claims abstract description 14
- 241000196324 Embryophyta Species 0.000 claims description 92
- 230000009261 transgenic effect Effects 0.000 claims description 31
- 241001429251 Beet necrotic yellow vein virus Species 0.000 claims description 30
- 241000219310 Beta vulgaris subsp. vulgaris Species 0.000 claims description 25
- 150000007523 nucleic acids Chemical class 0.000 claims description 17
- 230000001105 regulatory effect Effects 0.000 claims description 15
- 108020004707 nucleic acids Proteins 0.000 claims description 10
- 102000039446 nucleic acids Human genes 0.000 claims description 10
- 244000061456 Solanum tuberosum Species 0.000 claims description 9
- 235000002595 Solanum tuberosum Nutrition 0.000 claims description 9
- 235000021536 Sugar beet Nutrition 0.000 claims description 9
- 108090000623 proteins and genes Proteins 0.000 claims description 9
- 235000017060 Arachis glabrata Nutrition 0.000 claims description 4
- 244000105624 Arachis hypogaea Species 0.000 claims description 4
- 235000010777 Arachis hypogaea Nutrition 0.000 claims description 4
- 235000018262 Arachis monticola Nutrition 0.000 claims description 4
- 240000005979 Hordeum vulgare Species 0.000 claims description 4
- 235000007340 Hordeum vulgare Nutrition 0.000 claims description 4
- 235000011430 Malus pumila Nutrition 0.000 claims description 4
- 235000015103 Malus silvestris Nutrition 0.000 claims description 4
- 235000003095 Vaccinium corymbosum Nutrition 0.000 claims description 4
- 235000017537 Vaccinium myrtillus Nutrition 0.000 claims description 4
- 235000021014 blueberries Nutrition 0.000 claims description 4
- 230000001939 inductive effect Effects 0.000 claims description 4
- 235000020232 peanut Nutrition 0.000 claims description 4
- 230000001131 transforming effect Effects 0.000 claims description 4
- 108700007698 Genetic Terminator Regions Proteins 0.000 claims description 3
- 241000233855 Orchidaceae Species 0.000 claims description 3
- 241000219793 Trifolium Species 0.000 claims description 3
- 240000000851 Vaccinium corymbosum Species 0.000 claims description 3
- 241000219195 Arabidopsis thaliana Species 0.000 claims description 2
- 241000701489 Cauliflower mosaic virus Species 0.000 claims description 2
- 108010068086 Polyubiquitin Proteins 0.000 claims description 2
- 102100037935 Polyubiquitin-C Human genes 0.000 claims description 2
- 235000013399 edible fruits Nutrition 0.000 claims description 2
- 241001493096 Apple stem pitting virus Species 0.000 claims 2
- 241000724306 Barley stripe mosaic virus Species 0.000 claims 2
- 241000203314 Beet soil-borne virus Species 0.000 claims 2
- 241001429249 Blueberry scorch virus Species 0.000 claims 2
- 241000710019 Cymbidium mosaic virus Species 0.000 claims 2
- 244000141359 Malus pumila Species 0.000 claims 2
- 241001135902 Peanut clump virus Species 0.000 claims 2
- 241001502576 Potato mop-top virus Species 0.000 claims 2
- 241000710181 Potato virus M Species 0.000 claims 2
- 241000710052 White clover mosaic virus Species 0.000 claims 2
- 241000709992 Potato virus X Species 0.000 claims 1
- 150000001413 amino acids Chemical class 0.000 abstract description 11
- 230000035772 mutation Effects 0.000 abstract description 9
- 230000002939 deleterious effect Effects 0.000 abstract description 6
- 238000006467 substitution reaction Methods 0.000 abstract description 5
- 230000009418 agronomic effect Effects 0.000 abstract description 3
- 210000004027 cell Anatomy 0.000 description 29
- 125000003729 nucleotide group Chemical group 0.000 description 9
- 108091028043 Nucleic acid sequence Proteins 0.000 description 8
- 101710132601 Capsid protein Proteins 0.000 description 7
- 101710094648 Coat protein Proteins 0.000 description 7
- 102100021181 Golgi phosphoprotein 3 Human genes 0.000 description 7
- 101710125418 Major capsid protein Proteins 0.000 description 7
- 101710141454 Nucleoprotein Proteins 0.000 description 7
- 101710083689 Probable capsid protein Proteins 0.000 description 7
- 125000003275 alpha amino acid group Chemical group 0.000 description 7
- 230000007246 mechanism Effects 0.000 description 7
- 239000002773 nucleotide Substances 0.000 description 7
- 108091032973 (ribonucleotides)n+m Proteins 0.000 description 6
- 241000335053 Beta vulgaris Species 0.000 description 6
- 230000009385 viral infection Effects 0.000 description 6
- 241000894007 species Species 0.000 description 5
- 208000036142 Viral infection Diseases 0.000 description 4
- 238000009792 diffusion process Methods 0.000 description 4
- 230000001404 mediated effect Effects 0.000 description 4
- 102000040650 (ribonucleotides)n+m Human genes 0.000 description 3
- 235000016068 Berberis vulgaris Nutrition 0.000 description 3
- 235000021533 Beta vulgaris Nutrition 0.000 description 3
- 230000000903 blocking effect Effects 0.000 description 3
- 201000010099 disease Diseases 0.000 description 3
- 208000037265 diseases, disorders, signs and symptoms Diseases 0.000 description 3
- 102000004169 proteins and genes Human genes 0.000 description 3
- 230000008261 resistance mechanism Effects 0.000 description 3
- 230000009466 transformation Effects 0.000 description 3
- 241000723722 Furovirus Species 0.000 description 2
- 244000070406 Malus silvestris Species 0.000 description 2
- 101150085755 P15 gene Proteins 0.000 description 2
- 108010067390 Viral Proteins Proteins 0.000 description 2
- 239000002253 acid Substances 0.000 description 2
- 150000007513 acids Chemical class 0.000 description 2
- 238000004113 cell culture Methods 0.000 description 2
- 230000002068 genetic effect Effects 0.000 description 2
- 238000010353 genetic engineering Methods 0.000 description 2
- 230000002401 inhibitory effect Effects 0.000 description 2
- 238000004519 manufacturing process Methods 0.000 description 2
- 230000001172 regenerating effect Effects 0.000 description 2
- 230000008929 regeneration Effects 0.000 description 2
- 238000011069 regeneration method Methods 0.000 description 2
- 238000011426 transformation method Methods 0.000 description 2
- FWMNVWWHGCHHJJ-SKKKGAJSSA-N 4-amino-1-[(2r)-6-amino-2-[[(2r)-2-[[(2r)-2-[[(2r)-2-amino-3-phenylpropanoyl]amino]-3-phenylpropanoyl]amino]-4-methylpentanoyl]amino]hexanoyl]piperidine-4-carboxylic acid Chemical compound C([C@H](C(=O)N[C@H](CC(C)C)C(=O)N[C@H](CCCCN)C(=O)N1CCC(N)(CC1)C(O)=O)NC(=O)[C@H](N)CC=1C=CC=CC=1)C1=CC=CC=C1 FWMNVWWHGCHHJJ-SKKKGAJSSA-N 0.000 description 1
- 235000021537 Beetroot Nutrition 0.000 description 1
- 235000021538 Chard Nutrition 0.000 description 1
- 240000008067 Cucumis sativus Species 0.000 description 1
- 235000010799 Cucumis sativus var sativus Nutrition 0.000 description 1
- 240000004244 Cucurbita moschata Species 0.000 description 1
- 235000009854 Cucurbita moschata Nutrition 0.000 description 1
- 235000009852 Cucurbita pepo Nutrition 0.000 description 1
- 241000732800 Cymbidium Species 0.000 description 1
- 241000233866 Fungi Species 0.000 description 1
- 108010054147 Hemoglobins Proteins 0.000 description 1
- 241000724309 Hordeivirus Species 0.000 description 1
- 206010020649 Hyperkeratosis Diseases 0.000 description 1
- 235000007688 Lycopersicon esculentum Nutrition 0.000 description 1
- 206010034133 Pathogen resistance Diseases 0.000 description 1
- 241000132144 Polymyxa betae Species 0.000 description 1
- 240000003768 Solanum lycopersicum Species 0.000 description 1
- 108700019146 Transgenes Proteins 0.000 description 1
- 244000042324 Trifolium repens Species 0.000 description 1
- 235000013540 Trifolium repens var repens Nutrition 0.000 description 1
- 244000077233 Vaccinium uliginosum Species 0.000 description 1
- 108700005077 Viral Genes Proteins 0.000 description 1
- 108020000999 Viral RNA Proteins 0.000 description 1
- 238000007796 conventional method Methods 0.000 description 1
- 210000002257 embryonic structure Anatomy 0.000 description 1
- 230000007613 environmental effect Effects 0.000 description 1
- 238000003144 genetic modification method Methods 0.000 description 1
- 230000036039 immunity Effects 0.000 description 1
- 230000002458 infectious effect Effects 0.000 description 1
- 230000005764 inhibitory process Effects 0.000 description 1
- 230000003993 interaction Effects 0.000 description 1
- 230000002452 interceptive effect Effects 0.000 description 1
- 230000005923 long-lasting effect Effects 0.000 description 1
- 244000005700 microbiome Species 0.000 description 1
- 230000004048 modification Effects 0.000 description 1
- 238000012986 modification Methods 0.000 description 1
- 230000008659 phytopathology Effects 0.000 description 1
- 239000013612 plasmid Substances 0.000 description 1
- 210000003449 plasmodesmata Anatomy 0.000 description 1
- 238000002360 preparation method Methods 0.000 description 1
- 230000008569 process Effects 0.000 description 1
- 108090000765 processed proteins & peptides Proteins 0.000 description 1
- 230000001737 promoting effect Effects 0.000 description 1
- 230000010076 replication Effects 0.000 description 1
- 239000002689 soil Substances 0.000 description 1
- 235000020354 squash Nutrition 0.000 description 1
- 238000012360 testing method Methods 0.000 description 1
- 238000012546 transfer Methods 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- C07K14/005—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from viruses
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
- C12N15/82—Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
- C12N15/8241—Phenotypically and genetically modified plants via recombinant DNA technology
- C12N15/8261—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield
- C12N15/8271—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance
- C12N15/8279—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance for biotic stress resistance, pathogen resistance, disease resistance
- C12N15/8283—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance for biotic stress resistance, pathogen resistance, disease resistance for virus resistance
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N2770/00—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA ssRNA viruses positive-sense
- C12N2770/00011—Details
- C12N2770/00022—New viral proteins or individual genes, new structural or functional aspects of known viral proteins or genes
Definitions
- the present invention is related to a method of genetic modification of a wild type viral sequence, for reducing or suppressing deleterious properties of plants or plant cells transformed by said wild type viral sequence.
- the present invention is also related to the modified viral sequence obtained by said method, and to the plant and the plant cell comprising said modified viral sequence.
- Rhizomania The widespread viral disease of the sugar beet plant ( Beta vulgaris ) called Rhizomania is caused by a furovirus, the beet necrotic yellow vein virus (BNYVV) (Tamada T. & Baba T. 1973 Annals of the Phytopathological Society of Japan 39:325-332; Kuszala M. & Putz C. 1977 Annals of Phytopathology 9:435-446) which is transmitted to the root of the beet by the soil borne fungus Polymyxa betae (Keskin B. 1964 Archiv für Mikrobiology 49:348-374).
- BNYVV beet necrotic yellow vein virus
- the virus sequence will be transformed in an appropriate cell or tissue culture of the plant species using an Aerobacterium mediated transformation system or a direct gene transfer method according to the constraints of the tissue culture or cell culture method which can be successfully applied in a given species. A whole plant will be regenerated and the expression of the transgene will be characterized.
- sugar beet is known as a recalcitrant species in cell culture, limiting the extent of practical genetic engineering applications in that species, there are number of isolated reports of successful transformation and regeneration of whole plants (38).
- a few examples of engineering tolerance to the BNYVV by transforming and expressing the BNYVV coat-protein sequence in the sugar beet genome have also been published (Kallerhof, J. et al. 1990 Plant Cell Reports 9:24-228; WO 91/13159) though they rarely report data-on whole functional transgenic sugar beet plants (Ehlers U. et al. 1991 Theoretical and Applied Genetic 81:777-782).
- a complete technology package including a transformation method and the use of the sugar beet expression of the BNYVV coat-protein sequence as resistance source in the transgenic sugar beet plant obtained by said transformation method has been described in the Patent Application WO 91/13159.
- the coat-protein mediated resistance mechanism provides any potential for conferring to the sugar beet plant a total immunity to the BNYVV-infection by inhibiting multiplication and the virus diffusion mechanisms completely.
- To identify a resistance mechanism which significantly blocks the spread of the virus at the early stage of the infection process would be a major criterion of success to develop such a transgenic resistance.
- such resistance would diversity the mechanisms of resistance available.
- BNYVV beet necrotic yellow vein furovirus
- RNAs 1 and 2 encode functions essential for infection of all plants while the other three (RNAs 3, 4 and 5) are implicated in vector-mediated infection of sugar beet ( Beta vulgaris ) roots.
- Cell-to-cell movement of BNYVV is governed by a set of three successive, slightly overlapping viral genes on RNA 2 known as the triple gene block (TGB), which encode, in order, the viral proteins P42, P13 and P15 (gene products are designated by their calculated Mr in kilodalton).
- TGB triple gene block
- TGB genes and the corresponding proteins will be identified by the following terms: TGB-1, TGB-2, TGB-3 or by their encoded viral protein number P42, P13 and P15.
- TGB counterparts are present in other furoviruses and in potex-, carla- and hordeiviruses (Gilmer et al. 1992 Virology 189:40-47; Richards & Tamada 1992 Annu Revendication Phytopathol 30:291-313; Bouzoubaa et al. 1987 J Gen Virol 68:615-626; Herzog et al. 1994 J Gen Virol 18:3147-3155; Scott et al.
- the present invention aims to provide a new method for inducing a genetic modification of a wild type viral sequence involved in the multiplication and diffusion mechanisms of virus infecting plants, in order to reduce or suppress the possible deleterious effects upon plants or plant cells transformed by said viral sequence.
- Another aim of the present invention is to provide a method to obtain such a modified viral sequence which blocks virus infection when it is incorporated into a plant or a plant cell.
- the present invention is related to a method of genetic modification of TGB-3 wild type viral sequence, preferably the BNYVV P15 viral sequence, for reducing or suppressing the possible deleterious effects on the agronomic properties of the transformed plants or plant cells by said TGB-3 viral sequence.
- said genetic modification is a point mutation which allows the substitution of at least one amino-acid into another different amino-acid of said TGB-3 wild type sequence, preferably the substitution of at least one amino-acid into another different amino-acid in the BNYVV P15 sequence.
- the function of the TGB-3 wild type sequence in cell-to-cell movement involves at least in part “bridging” interactions between an element of the host plant (preferably a component of the plasmodesmata), and an element of viral origin (preferably another viral protein involved in cell-to-cell movement). Disruption of either the domain of the TGB-3 wild type sequence (which putatively interacts with the host element) or the domain of the TGB-3 wild type sequence (which putatively interacts with the viral element), allows the inhibition of the cell-to-cell movement.
- mutants in wild TGB-3 allow the type a sequence production of mutants produced in a transgenic plant, which will still interact with the viral element, but not with the host element. These mutants might compete for binding sites on the viral element of the TGB-3 wild type sequence produced in the initial stage of the viral infection, and abort the infection by inhibiting viral movement to an adjacent cell.
- substitution of at least one amino-acid into another different amino-acid of said sequence is made in regions rich in hydrophilic amino-acids usually present at the surface of the protein in its native configuration.
- the point mutation(s) allow the substitution of one or two amino-acids into one or two different amino-acids.
- the above mutants containing the point mutation were tested for their ability to promote cell-to-cell movement of a viral mutant (with a dysfunctional TGB-3 sequence, preferably a BNYVV mutant with a dysfunctional P15 gene) when expressed in trans from a replicon. These mutants were incapable of promoting such movement and were tested for their ability to inhibit infection with a co-inoculated wild type TGB-3 virus, preferably co-inoculated with a wild type BNYVV, when the mutant form of the TGB-3 sequence, preferably the P15 gene, was expressed from a replicon.
- the genetic modification method according to the invention preferably a point mutation
- a modified TGB-3 viral sequence preferably a modified BNYVV P15 sequence
- the genetic modifications in the TGB-3 wild type viral sequence are point mutations in the portions of said wild type viral sequence involved in the mechanisms of viral cell-to-cell movements.
- the present invention is also related to the modified TGB-3 viral nucleotide and amino-acid sequences obtained (recovered) by said (modification and selection) method, more preferably the BNYVV P15 modified nucleotide and amino-acid sequences obtained (recovered) by said method.
- said BNYVV P15 nucleotide and amino-acid sequences are selected from the group consisting of the following nucleotide (SEQ ID NOs: 1, 3 and 5) or corresponding amino-acid sequences (SEQ ID NOs: 2, 4 and 6): SEQ ID NO 1 ATGGTGCTTGTGGTT GC AGTAG C TTTATCTAATATTGTATTGTACATAGTTGCCGGTTGT 60 SEQ ID NO 2: M V L V V A V A L S N I V L Y I V A G C GTTGTTGTCAGTATGTTGTACTCACCGTTTTTCAGCAACGATGTTAAAGCGTCCAGCTAT 120 V V V S M L Y S P F F S N D V K A S S Y GCGGGAGCAATTTTTAAGGGGAGCGGCTGTATCATGGACAGGAATTCGTTTGCTCAATTT 180 A G A I F K G S G C I M D R N S F A Q F GGGAGTTGCGATATTCCAAAGCATGTAGCC
- P15 mutants the various modified BNYVV TGB-3 sequences will be hereafter called “P15 mutants,” identified by the following reference: BNP15-Ala1, corresponding SEQ ID NO: 1 and SEQ ID NO: 2, BNP15-Ala4 corresponding to SEQ ID NO: 3 and SEQ ID NO: 4, BNP15-Asp9, corresponding to SEQ ID NO: 5 and SEQ ID NO: 6.
- SEQ ID NO: 1 The nucleotide and corresponding amino-acid sequences of SEQ ID NO: 1, SEQ ID NO: 3 and SEQ ID NO: 5 can be compared to SEQ ID NO: 7 and 8, which are the sequences of the wild type P15 nucleotide and amino-acid sequence already described (Bouzoubaa et al. 1986 J Gen Virol 67:1689-1700).
- the present invention is also related to the vector comprising said modified nucleotide sequence possibly being operably linked to one or more regulatory sequence(s) active in a plant or a plant cell.
- said vector is a plasmid comprising already said regulatory sequence(s) active in a plant or a plant cell.
- the present invention is also related to a method for inducing a resistance to a virus comprising TGB-3 sequence, preferably one of the viruses described in the enclosed Table 1, and more preferably the BNYVV virus, said method comprising the following steps:
- said method is used for inducing a resistance to the BNYVV into a sugar beet plant or a sugar beet cell.
- Said method comprises the following steps:
- the present invention is also related to the obtained (recovered) transgenic plant or the transgenic plant cell resistant to an infection by a virus comprising a TGB-3 sequence, preferably one of the viruses described in the enclosed Table 1, more preferably the BNYVV virus, said plant or plant cell comprising a nucleic acid construct having a TGB-3 modified nucleic acid sequence, being operably linked to one or more regulatory sequences capable of being active in a plant or a plant cell.
- said modified nucleic acid sequence is selected from the group consisting of SEQ ID NO: 1, SEQ ID NO: 3 and SEQ ID NO: 5, being operably linked to one or more regulatory sequences active in a plant or a plant cell.
- the cell is a stomatal cell and the regulatory sequence comprises a promote sequence and a terminator sequence capable of being active in a plant.
- Said promoter sequence can be constitutive or could be obtained from a foreign promoter sequence, and is preferably selected from the group consisting of the 35S Cauliflower Mosaic Virus promoter, and/or the polyubiquitin Arabidopsis thaliana promoter.
- the promoter sequence is a promoter which is mainly capable of being active in the root tissue of plants such as the par promoter or the hemoglobin gene from Perosponia andersonii.
- a last aspect of the present invention is related to a transgenic plant tissue such as fruit, stem, root, tuber, seed of the transgenic plant according to the invention or a reproducible structure (preferably selected from the group consisting of calluses, buds or embryos) obtained from the transgenic plant or the plant cell according to the invention.
- a transgenic plant tissue such as fruit, stem, root, tuber, seed of the transgenic plant according to the invention or a reproducible structure (preferably selected from the group consisting of calluses, buds or embryos) obtained from the transgenic plant or the plant cell according to the invention.
- transgenic sugar beet plants and plant cells are preferably used for the preparation of transgenic sugar beet plants and plant cells according to the invention.
Landscapes
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Genetics & Genomics (AREA)
- Chemical & Material Sciences (AREA)
- Organic Chemistry (AREA)
- Engineering & Computer Science (AREA)
- Molecular Biology (AREA)
- Biomedical Technology (AREA)
- Virology (AREA)
- Biophysics (AREA)
- Biotechnology (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Biochemistry (AREA)
- Wood Science & Technology (AREA)
- Zoology (AREA)
- Physics & Mathematics (AREA)
- Microbiology (AREA)
- Plant Pathology (AREA)
- Cell Biology (AREA)
- Gastroenterology & Hepatology (AREA)
- Medicinal Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Micro-Organisms Or Cultivation Processes Thereof (AREA)
- Breeding Of Plants And Reproduction By Means Of Culturing (AREA)
- Saccharide Compounds (AREA)
Abstract
The present invention concerns a method of genetic modification of a TGB-3 wild type viral sequence for reducing or suppressing the possible deleterious effects of the agronomic properties of a transformed plant or plant cell by said TGB-3 viral sequence, comprising the following successive steps: submitting said sequence to point mutation(s) which allow the substitution of at least one amino-acid into a different amino-acid; selecting genetically modified TGB-3 wild type viral sequences having said point mutation(s) and which are not able to promote cell-to-cell movement of a mutant virus having a dysfunctional TGB-3 wild type viral sequence, when expressed in trans from a replicon; further selecting among said genetically modified TGB-3 viral sequences, the specifically genetically modified sequence which inhibits infection with a co-inoculated wild type virus when the mutant form was expressed from a replicon; and recovering said specifically genetically modified TGB-3 viral sequence.
Description
- This application is a continuation of U.S. patent application Ser. No. 09/743,905, filed Apr. 24, 2001, the entire disclosure of which is hereby expressly incorporated by reference. The U.S. patent application Ser. No. 09/743,905, filed Apr. 24, 2001, is the U.S. National Phase under 35 U.S.C. §371 of International Patent Application PCT/BE99/00089, filed Jul. 9, 1999 designating the U.S. and published in English on Jan. 20, 2000 as WO 00/03025, which claims priority of European patent application EP 98870159.5, filed Jul. 10, 1998.
- The present invention is related to a method of genetic modification of a wild type viral sequence, for reducing or suppressing deleterious properties of plants or plant cells transformed by said wild type viral sequence.
- The present invention is also related to the modified viral sequence obtained by said method, and to the plant and the plant cell comprising said modified viral sequence.
- The widespread viral disease of the sugar beet plant (Beta vulgaris) called Rhizomania is caused by a furovirus, the beet necrotic yellow vein virus (BNYVV) (Tamada T. & Baba T. 1973 Annals of the Phytopathological Society of Japan 39:325-332; Kuszala M. & Putz C. 1977 Annals of Phytopathology 9:435-446) which is transmitted to the root of the beet by the soil borne fungus Polymyxa betae (Keskin B. 1964 Archiv für Mikrobiology 49:348-374).
- The disease affects significantly acreages of the area where the sugar beet plant is grown for industrial use in Europe, USA and Japan and is still in extension in several places in Western Europe (Asher M. J. C. 1993 “Rhizomania” In: The sugar beet crop, ed. D. A. Cooke and R. K. Scott, Chapman & Hall, London, pp. 312-338; Richard-Molard M. 1995 Rhizomanie In Institut français de la betterave industrielle. Compte-rendu des travaux effectues en 1994, ITB, Paris pp. 225-229).
- Since 1986, a number of reports and publications have described the use of isolated viral nucleotide sequences expressed in plants to confer a high level of tolerance against a specific infectious virus or even to confer a broad spectrum type of resistance against a number of related viruses (Powell A. P. et al. 1986 Science 232:738-743; Fritchen J. H. & Beachy R. N. 1993 Ann Rev Microbiol 47:739-763; Wilson T. M. A. 1993 PNAS USA 90:3134-3141). One of the most documented viral resistance strategies based on genetic engineering, in many cultivated species such as potato, squash, cucumber or tomato, is the use of the viral nucleotide sequence which under the control of plant regulatory elements, encodes the coat-protein of the target virus (Gonsalves D. & Slightom, J. L. 1993 Seminars in Virology 4:397-405).
- However, in coat-protein mediated resistance, the expression of a certain level of resistance in the transgenic plant might be attributed to different mechanisms such as RNA co-suppression and not necessarily to the production of the protein sequence.
- In general, the virus sequence will be transformed in an appropriate cell or tissue culture of the plant species using an Aerobacterium mediated transformation system or a direct gene transfer method according to the constraints of the tissue culture or cell culture method which can be successfully applied in a given species. A whole plant will be regenerated and the expression of the transgene will be characterized.
- Though sugar beet is known as a recalcitrant species in cell culture, limiting the extent of practical genetic engineering applications in that species, there are number of isolated reports of successful transformation and regeneration of whole plants (38). A few examples of engineering tolerance to the BNYVV by transforming and expressing the BNYVV coat-protein sequence in the sugar beet genome have also been published (Kallerhof, J. et al. 1990 Plant Cell Reports 9:24-228; WO 91/13159) though they rarely report data-on whole functional transgenic sugar beet plants (Ehlers U. et al. 1991 Theoretical and Applied Genetic 81:777-782). In particular, reports show limited data on the level of resistance observed in infected conditions with transgenic sugar beet plants transformed with a gene encoding a BNYVV coat-protein sequence (Kraus J. et al. 1994 Field performance of transgenic sugar beet plants expressing BNYVV coat protein plants, Fourth International Congress of Plant Molecular Biology, Int. Soc. for Plant Molecular Biology, Amsterdam; Maiss E. et al. 1994 Proceedings of the Third International Symposium on the Biosafety Results of Field Tests of Genetically Modified Plants and Microorganisms, Monterey, pp. 129-139).
- A complete technology package including a transformation method and the use of the sugar beet expression of the BNYVV coat-protein sequence as resistance source in the transgenic sugar beet plant obtained by said transformation method has been described in the Patent Application WO 91/13159.
- Based on the information published, it can not be concluded that the coat-protein mediated resistance mechanism provides any potential for conferring to the sugar beet plant a total immunity to the BNYVV-infection by inhibiting multiplication and the virus diffusion mechanisms completely. To identify a resistance mechanism which significantly blocks the spread of the virus at the early stage of the infection process would be a major criterion of success to develop such a transgenic resistance. In addition, such resistance would diversity the mechanisms of resistance available.
- Because the disease is shown to expand in many countries or areas, at a speed depending upon the combination of numerous local environmental and agricultural factors, there is a major interest in diversification and improvements of the genetic resistance mechanisms which may, alone or in combination, confer a stable and long lasting resistance strategy in the current and future varieties of sugar beet plants which are grown for industrial use.
- The genome of beet necrotic yellow vein furovirus (BNYVV) consists of five plus-sense RNAs, two of which (RNAs 1 and 2) encode functions essential for infection of all plants while the other three (RNAs 3, 4 and 5) are implicated in vector-mediated infection of sugar beet (Beta vulgaris) roots. Cell-to-cell movement of BNYVV is governed by a set of three successive, slightly overlapping viral genes on RNA 2 known as the triple gene block (TGB), which encode, in order, the viral proteins P42, P13 and P15 (gene products are designated by their calculated Mr in kilodalton).
- In the following description, the TGB genes and the corresponding proteins will be identified by the following terms: TGB-1, TGB-2, TGB-3 or by their encoded viral protein number P42, P13 and P15. TGB counterparts are present in other furoviruses and in potex-, carla- and hordeiviruses (Gilmer et al. 1992 Virology 189:40-47; Richards & Tamada 1992 Annu Revendication Phytopathol 30:291-313; Bouzoubaa et al. 1987 J Gen Virol 68:615-626; Herzog et al. 1994 J Gen Virol 18:3147-3155; Scott et al. 1994 J Gen Virol 75:3561-3568; Koonin & Dolja 1993 Crit Revendication Biochem and Mol Biol 28:375-430). In the enclosed Table 1 are represented viruses having a TGB-3 sequence, the molecular weight of TGB-3 of said viruses, their host and references.
- It has been shown previously that independent expression of P15 from a viral-RNA replication species known as a “replicon,” derived from BNYVV RNA 3, inhibits infection with BNYVV by interfering cell-to-cell movement (Bleykasten-Grosshans et al. 1997 Mol Plant-Microbe Interact 10:240-246).
- In order to introduce a virus comprising a TGB-3 nucleic acid sequence into a plant cell or a plant, it has been proposed to incorporate a nucleic acid construct comprising said TGB-3 nucleic acid sequence operably linked to one or more regulatory sequences active in said plant (WO 98/07875).
- However, while expression of wild type TGB-3 viral sequence in a transgenic plant allows the blocking of said viral infection, the presence of said wilt type sequence may induce deleterious effects on the agronomic properties of transformed plants or plant cells.
- The present invention aims to provide a new method for inducing a genetic modification of a wild type viral sequence involved in the multiplication and diffusion mechanisms of virus infecting plants, in order to reduce or suppress the possible deleterious effects upon plants or plant cells transformed by said viral sequence.
- Another aim of the present invention is to provide a method to obtain such a modified viral sequence which blocks virus infection when it is incorporated into a plant or a plant cell.
- The present invention is related to a method of genetic modification of TGB-3 wild type viral sequence, preferably the BNYVV P15 viral sequence, for reducing or suppressing the possible deleterious effects on the agronomic properties of the transformed plants or plant cells by said TGB-3 viral sequence.
- Preferably, said genetic modification is a point mutation which allows the substitution of at least one amino-acid into another different amino-acid of said TGB-3 wild type sequence, preferably the substitution of at least one amino-acid into another different amino-acid in the BNYVV P15 sequence.
- It seems that the function of the TGB-3 wild type sequence in cell-to-cell movement involves at least in part “bridging” interactions between an element of the host plant (preferably a component of the plasmodesmata), and an element of viral origin (preferably another viral protein involved in cell-to-cell movement). Disruption of either the domain of the TGB-3 wild type sequence (which putatively interacts with the host element) or the domain of the TGB-3 wild type sequence (which putatively interacts with the viral element), allows the inhibition of the cell-to-cell movement.
- In addition, it seems that said specific mutations in wild TGB-3 allow the type a sequence production of mutants produced in a transgenic plant, which will still interact with the viral element, but not with the host element. These mutants might compete for binding sites on the viral element of the TGB-3 wild type sequence produced in the initial stage of the viral infection, and abort the infection by inhibiting viral movement to an adjacent cell.
- Advantageously, the substitution of at least one amino-acid into another different amino-acid of said sequence is made in regions rich in hydrophilic amino-acids usually present at the surface of the protein in its native configuration.
- Preferably, the point mutation(s) allow the substitution of one or two amino-acids into one or two different amino-acids.
- In the enclosed Table 1, preferred examples of said viruses having a TGB-3 wild type viral sequence, the molecular weight of the corresponding TGB-3 peptide, their hosts and a reference, are described. The specific wild type P15 nucleotide and amino-acid sequences of BNYVV are also already described (Bouzoubaa et al. 1986 J Gen Virol 67:1689-1700).
TABLE 1 Size of Virus TGB-3 Host Reference Apple stem 8 kDa apple Jelkman, 1994 J Gen Virol pitting virus 75:1535-1542 Blueberry 7 kDa blueberry Cavileer et al. 1994 J Gen Viol scorch virus 75:711-720 Potato virus 7 kDa potato Zavriev et al. 1991 J Gen Virol M 72:9-14 White clover 8 kDa clover Forster et al. 1988 Nucl Acids Res mosaic virus 16:291-303 Cymbidium 10 kDa orchid Neo et al. 1992 Plant Mol Biol mosaic virus 18:1027-1029 Potato virus 8 kDa potato Rupasov et al. 1994 J Gen Virol X 70:1861-1869 Barley stripe 17 kDa barley Gustafson et al. 1986 Nucl Acids Res mosaic virus 14:3895-3909 Potato mop 21 kDa potato Scott et al. 1994 J Gen Virol top virus 75:3561-3568 Peanut 17 kDa peanut Herzog et al. 1994 J Gen Virol clump virus 75:3147-3155 Beet soil- 22 kDa Sugar beet Koenig et al. 1996 Virology borne virus 216:202-207 - The above-described point mutations were realized by conventional methods known by the person skilled in the art.
- The above mutants containing the point mutation were tested for their ability to promote cell-to-cell movement of a viral mutant (with a dysfunctional TGB-3 sequence, preferably a BNYVV mutant with a dysfunctional P15 gene) when expressed in trans from a replicon. These mutants were incapable of promoting such movement and were tested for their ability to inhibit infection with a co-inoculated wild type TGB-3 virus, preferably co-inoculated with a wild type BNYVV, when the mutant form of the TGB-3 sequence, preferably the P15 gene, was expressed from a replicon.
- The inventors have discovered unexpectedly that the genetic modification method according to the invention (preferably a point mutation) could be used to obtain a modified TGB-3 viral sequence (preferably a modified BNYVV P15 sequence), which is able to block virus infection without producing deleterious effects when incorporated in the genome of a plant or a plant cell.
- It is meant by “being able to block viral infection into a plant or a plant cell,” the possibility to obtain a high degree of tolerance by the plant or plant cell transformed by said modified TGB-3 viral sequence to said viral infection, in particular the possibility to ensure rapid and total blocking of the virus multiplication and diffusion mechanisms into the plant, preferably the blocking of the BNYVV virus multiplication and diffusion mechanisms into a sugar beet plant (beta vulgaris), including fodder beet, Swiss Chard and table beet which may also be subjected to said BNYVV infection.
- Said tolerance or resistance could be easily measured by various methods well known by the person skilled in the art.
- Preferably, the genetic modifications in the TGB-3 wild type viral sequence are point mutations in the portions of said wild type viral sequence involved in the mechanisms of viral cell-to-cell movements.
- The present invention is also related to the modified TGB-3 viral nucleotide and amino-acid sequences obtained (recovered) by said (modification and selection) method, more preferably the BNYVV P15 modified nucleotide and amino-acid sequences obtained (recovered) by said method.
- Preferably, said BNYVV P15 nucleotide and amino-acid sequences are selected from the group consisting of the following nucleotide (SEQ ID NOs: 1, 3 and 5) or corresponding amino-acid sequences (SEQ ID NOs: 2, 4 and 6):
SEQ ID NO 1 ATGGTGCTTGTGGTTGCAGTAGCTTTATCTAATATTGTATTGTACATAGTTGCCGGTTGT 60 SEQ ID NO 2: M V L V V A V A L S N I V L Y I V A G C GTTGTTGTCAGTATGTTGTACTCACCGTTTTTCAGCAACGATGTTAAAGCGTCCAGCTAT 120 V V V S M L Y S P F F S N D V K A S S Y GCGGGAGCAATTTTTAAGGGGAGCGGCTGTATCATGGACAGGAATTCGTTTGCTCAATTT 180 A G A I F K G S G C I M D R N S F A Q F GGGAGTTGCGATATTCCAAAGCATGTAGCCGAGTCCATCACTAAGGTTGCCACCAAAGAG 240 G S C D I P K H V A E S I T K V A T K E CACGATGTTGACATAATGGTAAAAAGGGGTGAAGTGACCGTTCGTGTTGTGACTCTCACC 300 H D V D I M V K R G E V T V R V V T L T GAAACTATTTTTATAATATTATCTAGATTGTTTGGTTTGGCGGTGTTTTTGTTCATGATA 360 E T I F I I L S R L P G L A V F L F M I TGTTTAATGTCTATAGTTTGGTTTTGGTATCATAGATAA 399 C L M S I V W F W Y H R * SEQ ID NO 3: ATGGTGCTTGTGGTTAAAGTAGATTTATCTAATATTGTATTGTACATAGTTGCCGGTTGT 60 SEQ ID NO 4: M V L V V K V D L S N I V L Y I V A G C GTTGTTGTCAGTATGTTGTACTCACCGTTTTTCAGCAACGATGTTAAAGCGTCCAGCTAT 120 V V V S M L Y S P F F S N D V K A S S Y GCGGGAGCAATTTTTAAGGGGAGCGGCTGTATCATGGCCGCGAATTCGTTTGCTCAATTT 180 A G A I F K G S G C I M A A N S F A Q F GGGAGTTGCGATATTCCAAAGCATGTAGCCGAGTCCATCACTAAGGTTGCCACCAAAGAG 240 G S C D I P K H V A E S I T K V A T K E CACGATGTTGACATAATGGTAAAAAGGGGTGAAGTGACCGTTCGTGTTGTGACTCTCACC 300 H D V D I M V K R G E V T V R V V T L T GAAACTATTTTTATAATATTATCTAGATTGTTTGGTTTGGCGGTGTTTTTGTTCATGATA 360 E T I F I I L S R L F G L A V F L F M I TGTTTAATGTCTATAGTTTGGTTTTGGTATCATAGATAA 399 C L M S I V W F W Y H R * SEQ ID NO 5: ATGGTGCTTGTGGTTAAAGTAGATTTATCTAATATTGTATTGTACATAGTTGCCGGTTGT 60 SEQ ID NO 6: M V L V V K V D L S N I V L Y I V A G C GTTGTTGTCAGTATGTTGTACTCACCGTTTTTCAGCAACGATGTTAAAGCGTCCAGCTAT 120 V V V S M L Y S P F F S N D V K A S S Y GCGGGAGCAATTTTTAAGGGGAGCGGCTGTATCATGGACAGGAATTCGTTTGCTCAATTT 180 A G A I F K G S G C I M D R N S F A Q F GGGAGTTGCGATATTCCAAAGCATGTAGCCGAGTCCATCACTAAGGTTGCCACCAAAGAG 240 G S C D I P K H V A E S I T K V A T K E CACGATGTTGACATAATGGTAAAAAGGGGTGAAGTGACCGTTCGTGTTGTGACTCTCACC 300 H D V D I M V K R G E V T V R V V T L T GAAACTATTTTTATAATATTATCTAGATTGTTTGGTTTGGATGATTTTTTGTTCATGATA 360 E T I F I I L S R L F G L D D F L F M I TGTTTAATGTCTATAGTTTGGTTTTGGTATCATAGATAA 399 C L M S I V W F W Y H R * - In the following description, the various modified BNYVV TGB-3 sequences will be hereafter called “P15 mutants,” identified by the following reference: BNP15-Ala1, corresponding SEQ ID NO: 1 and SEQ ID NO: 2, BNP15-Ala4 corresponding to SEQ ID NO: 3 and SEQ ID NO: 4, BNP15-Asp9, corresponding to SEQ ID NO: 5 and SEQ ID NO: 6.
- The nucleotide and corresponding amino-acid sequences of SEQ ID NO: 1, SEQ ID NO: 3 and SEQ ID NO: 5 can be compared to SEQ ID NO: 7 and 8, which are the sequences of the wild type P15 nucleotide and amino-acid sequence already described (Bouzoubaa et al. 1986 J Gen Virol 67:1689-1700).
- The present invention is also related to the vector comprising said modified nucleotide sequence possibly being operably linked to one or more regulatory sequence(s) active in a plant or a plant cell. Preferably, said vector is a plasmid comprising already said regulatory sequence(s) active in a plant or a plant cell.
- The present invention is also related to a method for inducing a resistance to a virus comprising TGB-3 sequence, preferably one of the viruses described in the enclosed Table 1, and more preferably the BNYVV virus, said method comprising the following steps:
-
- preparing a nucleic acid construct comprising a nucleic acid sequence being genetically modified according to the method of the invention and being operably linked to one or more regulatory sequences active into a plant or a plant cell,
- transforming the plant cell with the nucleic acid construct, and
- possibly regenerating the transgenic plant from the transformed plant cell.
- Preferably, said method is used for inducing a resistance to the BNYVV into a sugar beet plant or a sugar beet cell. Said method comprises the following steps:
-
- preparing a nucleic acid construct comprising a modified nucleic acid sequence obtained by the method according to the invention, preferably preparing a nucleic acid construct comprising a nucleic acid sequence selected from the group consisting of SEQ ID NO: 1, SEQ ID NO: 3 or SEQ ID NO: 5, being operably linked to one or more regulatory sequences active into a plant,
- transforming the sugar beet plant cell with the nucleic acid construct, and
- possibly regenerating the transgenic sugar beet plant from the transformed sugar beet plant cell.
- The present invention is also related to the obtained (recovered) transgenic plant or the transgenic plant cell resistant to an infection by a virus comprising a TGB-3 sequence, preferably one of the viruses described in the enclosed Table 1, more preferably the BNYVV virus, said plant or plant cell comprising a nucleic acid construct having a TGB-3 modified nucleic acid sequence, being operably linked to one or more regulatory sequences capable of being active in a plant or a plant cell.
- Preferably, said modified nucleic acid sequence is selected from the group consisting of SEQ ID NO: 1, SEQ ID NO: 3 and SEQ ID NO: 5, being operably linked to one or more regulatory sequences active in a plant or a plant cell.
- Preferably, the cell is a stomatal cell and the regulatory sequence comprises a promote sequence and a terminator sequence capable of being active in a plant. Said promoter sequence can be constitutive or could be obtained from a foreign promoter sequence, and is preferably selected from the group consisting of the 35S Cauliflower Mosaic Virus promoter, and/or the polyubiquitin Arabidopsis thaliana promoter.
- Advantageously, the promoter sequence is a promoter which is mainly capable of being active in the root tissue of plants such as the par promoter or the hemoglobin gene from Perosponia andersonii.
- A last aspect of the present invention is related to a transgenic plant tissue such as fruit, stem, root, tuber, seed of the transgenic plant according to the invention or a reproducible structure (preferably selected from the group consisting of calluses, buds or embryos) obtained from the transgenic plant or the plant cell according to the invention.
- The techniques of plant transformation, tissue culture and regeneration used in the method according to the invention are the ones well known by the person skilled in the art. Such techniques are preferably the ones described in the International Patent Applications WO 95/101778, WO 91/13159 (corresponding to the European Patent Application EP-B-0517833), WO 98/07875, which are incorporated herein by reference.
- These techniques are preferably used for the preparation of transgenic sugar beet plants and plant cells according to the invention.
Claims (20)
1. A method of identifying mutants in a triple gene block 3 (TGB-3) viral sequence which inhibit infection of a virus into a cell, comprising:
mutating said TGB-3 sequence;
selecting TGB-3 mutants which no longer promote cell-to-cell movement of a (TGB-3 minus) mutant virus when expressed in trans from a replicon;
further selecting from the identified mutants those which also inhibit infection with a co-inoculated wild type virus when the mutant TGB-3 is expressed from a replicon;
recovering said mutant TGB-3 viral sequence wherein a mutant TGB-3 sequence recovered from the foregoing selection steps is a mutant TGB-3 viral sequence that inhibits infection of a virus into a cell.
2. The method according to claim 1 , wherein the TGB-3 wild type viral sequence is the beet necrotic yellow vein virus (BNYVV) P15 sequence.
3. A genetically modified TGB-3 viral sequence obtained by the method of claim 1 .
4. The genetically modified TGB-3 viral sequence according to claim 3 , selected from the group consisting of: SEQ ID NOS: 1, 3, and 5.
5. A vector comprising the genetically modified TGB-3 viral sequence according to claim 3 .
6. A method for inducing resistance to a virus in a plant or a plant cell comprising:
preparing a nucleic acid construct comprising a genetically modified TGB-3 viral sequence according to claim 3 operably linked to one or more regulatory sequence(s) active in a plant or a plant cell, and
transforming a plant cell with said nucleic acid construct.
7. The method according to claim 6 , wherein the virus is selected from the group consisting of the apple stem pitting virus, the blueberry scorch virus, the potato virus M, the white clover mosaic virus, the Cymbidium mosaic virus, the barley stripe mosaic virus, the potato mop top virus, the peanut clump virus, the beet soil-borne virus and the BNYVV virus.
8. The method according to claim 6 wherein the plant cell is a stomatal cell.
9. The method according to claim 6 wherein the plant is selected from the group consisting of apple, blueberry, potato, clover, orchid, barley, peanut and sugar beet.
10. The method according to claim 6 , wherein the regulatory sequence comprises a promoter sequence or a terminator sequence active in a plant.
11. The method according to claim 10 , wherein the promoter sequence is a constitutive or a foreign promoter sequence.
12. A transgenic plant or transgenic plant cell resistant to a virus comprising a nucleic acid construct having a genetically modified TGB-3 viral sequence according to claim 4 operably linked to one or more regulatory sequence(s) active in a plant or a plant cell.
13. A transgenic plant or transgenic plant cell according to claim 12 , wherein the virus is selected from the group consisting of the apple stem pitting virus, the blueberry scorch virus, the potato virus M, the white clover mosaic virus, the Cymbidium mosaic virus, the potato virus X, the barley stripe mosaic virus, the potato mop top virus, the peanut clump virus, the beet soil-borne virus and the BNYVV virus.
14. The transgenic plant or transgenic plant cell according to claim 12 selected from the group consisting of apple, blueberry, potato, clover, orchid, barley, peanut and sugar beet.
15. The transgenic plant or transgenic plant cell according to claim 12 , wherein the regulatory sequence comprises a promoter sequence and a terminator sequence active in a plant.
16. The transgenic plant or transgenic plant cell according to claim 12 , wherein the regulatory sequence(s) comprise a promoter sequence which is a constitutive or a foreign vegetal promoter sequence.
17. The transgenic plant or transgenic plant cell according to claim 16 , wherein the promoter sequence is selected from the group consisting of the 35S Cauliflower Mosaic Virus promoter, the polyubiquitin Arabidopsis thaliana promoter, and both.
18. The transgenic plant or transgenic plant cell according to claim 16 wherein promoter sequence is active in root tissues.
19. The transgenic plant tissue of claim 12 wherein said tissue is selected from the group consisting of fruit, stem, root, tuber, and seed.
20. The vector of claim 5 operably linked to one or more regulatory sequence(s) active in a plant cell.
Priority Applications (3)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US10/980,146 US20050138687A1 (en) | 1998-07-10 | 2004-11-01 | Method of genetic modification of a wild type viral sequence |
US11/418,384 US7663024B2 (en) | 1998-07-10 | 2006-05-03 | P15 hairpin constructs and use |
US12/425,331 US20090265808A1 (en) | 1998-07-10 | 2009-04-16 | P15 hairpin constructs and use |
Applications Claiming Priority (5)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
EP98870159.5 | 1998-07-10 | ||
EP98870159A EP0976831A1 (en) | 1998-07-10 | 1998-07-10 | Method of genetic modification of a wild type viral sequence |
US09/743,905 US6835538B1 (en) | 1998-07-10 | 1999-07-09 | Method of genetic modification of a wild type viral sequence |
PCT/BE1999/000089 WO2000003025A2 (en) | 1998-07-10 | 1999-07-09 | Method of genetic modification of a wild type viral sequence |
US10/980,146 US20050138687A1 (en) | 1998-07-10 | 2004-11-01 | Method of genetic modification of a wild type viral sequence |
Related Parent Applications (2)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
US09/743,905 Continuation US6835538B1 (en) | 1998-07-10 | 1999-07-09 | Method of genetic modification of a wild type viral sequence |
PCT/BE1999/000089 Continuation WO2000003025A2 (en) | 1998-07-10 | 1999-07-09 | Method of genetic modification of a wild type viral sequence |
Related Child Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
US11/418,384 Continuation-In-Part US7663024B2 (en) | 1998-07-10 | 2006-05-03 | P15 hairpin constructs and use |
Publications (1)
Publication Number | Publication Date |
---|---|
US20050138687A1 true US20050138687A1 (en) | 2005-06-23 |
Family
ID=8237068
Family Applications (2)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
US09/743,905 Expired - Lifetime US6835538B1 (en) | 1998-07-10 | 1999-07-09 | Method of genetic modification of a wild type viral sequence |
US10/980,146 Abandoned US20050138687A1 (en) | 1998-07-10 | 2004-11-01 | Method of genetic modification of a wild type viral sequence |
Family Applications Before (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
US09/743,905 Expired - Lifetime US6835538B1 (en) | 1998-07-10 | 1999-07-09 | Method of genetic modification of a wild type viral sequence |
Country Status (7)
Country | Link |
---|---|
US (2) | US6835538B1 (en) |
EP (2) | EP0976831A1 (en) |
AT (1) | ATE347605T1 (en) |
AU (1) | AU4765099A (en) |
DE (1) | DE69934329T2 (en) |
ES (1) | ES2278451T3 (en) |
WO (1) | WO2000003025A2 (en) |
Families Citing this family (3)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US7663024B2 (en) * | 1998-07-10 | 2010-02-16 | Sesvanderhave, N.V. | P15 hairpin constructs and use |
SE0004755D0 (en) * | 2000-12-21 | 2000-12-21 | Plant Science Sweden Ab | Virus resistance in plants |
CN112522307A (en) * | 2020-12-18 | 2021-03-19 | 郑州大学 | BSMV (human cytomegalovirus) viral vector-mediated CRISPR (clustered regularly interspaced short palindromic repeats)/Cas 9 recombinant vector and application thereof |
Family Cites Families (2)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP0517833B2 (en) * | 1990-03-02 | 2008-07-16 | Bayer BioScience N.V. | Regeneration and genetic transformation of sugar beet |
WO1998007875A1 (en) * | 1996-08-19 | 1998-02-26 | Ses Europe N.V./S.A. | Method for inducing viral resistance into a plant |
-
1998
- 1998-07-10 EP EP98870159A patent/EP0976831A1/en not_active Withdrawn
-
1999
- 1999-07-09 WO PCT/BE1999/000089 patent/WO2000003025A2/en active IP Right Grant
- 1999-07-09 AU AU47650/99A patent/AU4765099A/en not_active Abandoned
- 1999-07-09 AT AT99930957T patent/ATE347605T1/en active
- 1999-07-09 US US09/743,905 patent/US6835538B1/en not_active Expired - Lifetime
- 1999-07-09 EP EP99930957A patent/EP1144661B1/en not_active Expired - Lifetime
- 1999-07-09 ES ES99930957T patent/ES2278451T3/en not_active Expired - Lifetime
- 1999-07-09 DE DE69934329T patent/DE69934329T2/en not_active Expired - Lifetime
-
2004
- 2004-11-01 US US10/980,146 patent/US20050138687A1/en not_active Abandoned
Also Published As
Publication number | Publication date |
---|---|
DE69934329D1 (en) | 2007-01-18 |
WO2000003025A2 (en) | 2000-01-20 |
US6835538B1 (en) | 2004-12-28 |
EP0976831A1 (en) | 2000-02-02 |
DE69934329T2 (en) | 2007-06-21 |
EP1144661B1 (en) | 2006-12-06 |
ATE347605T1 (en) | 2006-12-15 |
EP1144661A3 (en) | 2001-11-28 |
WO2000003025A3 (en) | 2001-08-16 |
EP1144661A2 (en) | 2001-10-17 |
ES2278451T3 (en) | 2007-08-01 |
AU4765099A (en) | 2000-02-01 |
Similar Documents
Publication | Publication Date | Title |
---|---|---|
Pradeep et al. | Engineering resistance against Tobacco streak virus (TSV) in sunflower and tobacco using RNA interference | |
Kaniewski et al. | Extreme resistance to cucumber mosaic virus (CMV) in transgenic tomato expressing one or two viral coat proteins | |
AU707753B2 (en) | Papaya ringspot virus NIa protease gene | |
US7553668B2 (en) | Papaya ringspot virus genes | |
US20050138687A1 (en) | Method of genetic modification of a wild type viral sequence | |
EP0819176A1 (en) | Transgenic plants exhibiting heterologous virus resistance | |
Jones et al. | Raspberry bushy dwarf idaeovirus | |
HU223266B1 (en) | Method for inducing viral resistance into a plant | |
US7663024B2 (en) | P15 hairpin constructs and use | |
EP1038961A1 (en) | Method for inducing viral resistance into a plant | |
US6956149B1 (en) | Method of conveying BNYVV resistance to sugar beet plants | |
Spiegel et al. | Note: Characterization of a Peanut mottle virus isolate infecting peanut in Israel | |
Hammond et al. | Identification of potexvirus isolates from creeping phlox and trailing portulaca as strains of Alternanthera mosaic virus, and comparison of the 3-terminal portion of the viral genomes | |
AU2002307322A1 (en) | Papaya ringspot virus genes | |
Scholthof et al. | Molecular approaches for control of tomato bushy stunt virus | |
Tousignant et al. | I. MOLECULAR PARASITISM AND BIOCONTROL | |
EP1021080A4 (en) | HULL PROTEIN INDUCED RESISTANCE IN PLANTS |
Legal Events
Date | Code | Title | Description |
---|---|---|---|
STCB | Information on status: application discontinuation |
Free format text: ABANDONED -- FAILURE TO RESPOND TO AN OFFICE ACTION |