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US20040199944A1 - Maize H3C4 promoter combined with the first intron of rice actin, chimeric gene comprising it and transformed plant - Google Patents

Maize H3C4 promoter combined with the first intron of rice actin, chimeric gene comprising it and transformed plant Download PDF

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US20040199944A1
US20040199944A1 US10/758,799 US75879904A US2004199944A1 US 20040199944 A1 US20040199944 A1 US 20040199944A1 US 75879904 A US75879904 A US 75879904A US 2004199944 A1 US2004199944 A1 US 2004199944A1
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dna sequence
sequence encoding
expression cassette
plants
protein
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Richard Derose
Georges Freyssinet
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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/82Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
    • C12N15/8216Methods for controlling, regulating or enhancing expression of transgenes in plant cells
    • C12N15/8222Developmentally regulated expression systems, tissue, organ specific, temporal or spatial regulation
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/82Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
    • C12N15/8216Methods for controlling, regulating or enhancing expression of transgenes in plant cells
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/82Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
    • C12N15/8241Phenotypically and genetically modified plants via recombinant DNA technology
    • C12N15/8261Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield
    • C12N15/8271Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance
    • C12N15/8274Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance for herbicide resistance

Definitions

  • the present invention relates to a new 5′ regulatory sequence allowing the expression, in monocotyledonous plants, of a sequence heterologous to the said regulatory sequence, encoding a protein of interest.
  • the present invention also relates to a chimeric gene comprising the said regulatory sequence, a heterologous sequence encoding a protein of interest and a 3′ regulatory sequence allowing the expression of the protein of interest in a plant cell from a monocotyledonous plant, as well as a transformed monocotyledonous plant comprising the said chimeric gene and the means necessary for the transformation of plant cells and of plants.
  • promoters allowing the expression of sequences encoding proteins of interest in plants are known, are described in the literature, and have already allowed the development, to a commercial stage, of plants modified by genetic engineering. They are promoter sequences of genes which are expressed naturally in plants, in particular promoters of bacterial, viral or plant origin such as, for example, that of a gene for the ribulose bisphosphate carboxylase/oxygenase small subunit (U.S. Pat. No. 4,962,028) or of a gene of a plant virus such as, for example, that of cauliflower mosaic (U.S. Pat. No. 5,352,605). Promoters allowing the expression of heterologous genes in plants are in particular described in the following patents and patent applications: U.S.
  • Arabidopsis sp. histone promoters described in patent application EP 0,507,698 are for example known which are particularly efficient for allowing the expression of a heterologous gene in dicotyledonous plants such as tobacco, oil seed rape or soya bean, which are not functional in monocotyledonous plants such as maize.
  • the rice actin promoter is a promoter known to allow the expression of heterologous genes in monocotyledonous plants (U.S. Pat. No. 5,641,876).
  • U.S. Pat. No. 5,641,876 the problem of identifying new functional 5′ regulatory sequences for the expression of heterologous sequences in monocotyledonous plants still remains.
  • the present invention relates to a new DNA sequence, a 5′ regulatory element allowing the expression of a heterologous gene in a plant cell from a monocotyledonous plant, the said DNA sequence comprising, in the direction of transcription, a first DNA sequence, which is a functional fragment of the sequence of the maize H3C4 promoter, and a second DNA sequence, which is a functional fragment of the sequence of the first intron of rice actin.
  • the sequence of the maize H3C4 promoter is in particular described by Brumble et al. (Plant. Mol. Biol., 22: 1007-1015, 1993). It is the AluI fragment of the maize H3C4 promoter, of about 1 kb, corresponding to bases ⁇ 7 to ⁇ 1029 relative to the ATG of the sequence encoding the maize histone H3C4.
  • Functional fragment is understood according to the invention to mean any DNA sequence derived from the sequence of the maize H3C4 promoter or from the sequence of the first intron of rice actin, which reproduces the function of the sequence from which it is derived.
  • the functional fragment of the sequence of the maize H3C4 promoter comprises the DNA sequence described by the sequence identifier No. 1 (SEQ ID NO: 1) or a sequence homologous to the said sequence.
  • the functional fragment of the sequence of the maize H3C4 promoter consists of the DNA sequence described by the sequence identifier No. 1.
  • the functional fragment of the first intron of rice actin comprises the DNA sequence described by the sequence identifier No. 2 (SEQ ID NO: 2) or a sequence homologous to the said sequence.
  • the functional fragment of the first intron of rice actin consists of the DNA sequence described by the sequence identifier No. 2.
  • the DNA sequence, a 5′ regulatory element, according to the invention may comprise, in addition, between the first and second DNA sequences, neutral DNA fragments which are generally necessary for the construction of the sequence according to the invention. These are DNA fragments comprising up to 30 base pairs, preferably up to 20 base pairs. Neutral DNA fragments are understood according to the invention to mean DNA fragments which do not substantially modify the respective functions of the first and second DNA sequences of the sequence according to the invention.
  • the DNA sequence according to the invention comprises the DNA sequence represented by the sequence identifier No. 3 (SEQ ID NO: 3) or a sequence homologous to the said sequence. More preferably, the sequence according to the invention consists of the DNA sequence represented by the sequence identifier No. 3.
  • “Homologue” is understood according to the invention to mean a DNA sequence representing one or more sequence modifications relative to the reference DNA sequence described by the sequence identifier No. 1, 2 or 3, and reproducing the function of the abovementioned sequences. These modifications may be obtained according to the customary mutation techniques, or alternatively by choosing the synthetic oligonucleotides which may be used in the preparation of the said sequence by hybridization.
  • the degree of homology will be at least 70% relative to the reference sequence, preferably at least 80%, more preferably at least 90%.
  • the present invention also relates to a chimeric gene (or an expression cassette) comprising a coding sequence as well as heterologous regulatory elements at the 5′ and 3′ positions capable of functioning in plant cells from monocotyledonous plants, in which the 5′ regulatory elements comprise the DNA sequence according to the invention defined above.
  • Plant cell is understood to mean according to the invention any cell derived from a monocotyledonous plant and capable of constituting undifferentiated tissues such as calli, differentiated tissues such as embryos, monocotyledonous plant portions, monocotyledonous plants or seeds.
  • “Monocotyledonous plant” is understood according to the invention to mean any differentiated multicellular organism capable of photosynthesis, more particularly crop plants intended or otherwise as animal feed or for human consumption, such as for example wheat, barley, oats, rice, maize, sorghum, sugar cane and the like.
  • the regulatory promoter sequence it is also possible to use, in combination with the regulatory promoter sequence according to the invention, other regulatory sequences, which are situated between the promoter and the coding sequence, such as the sequences encoding transit peptides, either single, or double, and in this case optionally separated by an intermediate sequence, that is to say comprising, in the direction of transcription, a sequence encoding a transit peptide for a plant gene encoding a plastid localization enzyme, a portion of sequence of the mature N-terminal portion of a plant gene encoding a plastid localization enzyme, and then a sequence encoding a second transit peptide for a plant gene encoding a plastid localization enzyme consisting of a portion of sequence of the mature N-terminal portion of a plant gene encoding a plastid localization enzyme, as described in application EP 0,508,909.
  • transit peptide there may also be mentioned the signal peptide for the tobacco PR-1a gene described by Corn
  • regulatory terminator or polyadenylation sequence there may be used any corresponding sequence of bacterial origin, such as for example the Agrobacterium tumefaciens nos terminator, or alternatively of plant origin, such as for example a histone terminator as described in application EP 0,633,317.
  • the coding sequence of the chimeric gene according to the invention may comprise any sequence encoding the protein of interest which it is desired to express in a plant cell or a monocotyledonous plant.
  • This may be a gene encoding a selectable marker such as a gene conferring on the transformed monocotyledonous plant new agronomic properties, or a gene for enhancing the agronomic quality of the transformed monocotyledonous plant.
  • genes encoding selectable markers there may be mentioned genes for resistance to antibiotics, genes for tolerance to herbicides (bialaphos, glyphosate or isoxazoles), genes encoding easily identifiable enzymes such as the enzyme GUS, genes encoding pigments or enzymes regulating the production of pigments in the transformed cells.
  • genes for resistance to antibiotics genes for tolerance to herbicides (bialaphos, glyphosate or isoxazoles)
  • genes encoding easily identifiable enzymes such as the enzyme GUS
  • genes encoding pigments or enzymes regulating the production of pigments in the transformed cells are in particular described in patent applications WO 91/02071 and WO 95/06128.
  • genes conferring new agronomic properties on transformed monocotyledonous plants there may be mentioned the genes conferring tolerance to certain herbicides, those conferring tolerance to certain insects, those conferring tolerance to certain diseases and the like. Such genes are in particular described in patent applications WO 91/02071 and Wo 95/06128.
  • regulatory terminator or polyadenylation sequence there may be used any corresponding sequence of bacterial origin, such as for example the Agrobacterium tumefaciens nos terminator, or alternatively of plant origin, such as for example a histone terminator as described in application EP 0,633317.
  • the present invention is particularly appropriate for the expression of genes conferring tolerance to certain herbicides on transformed plant cells and on transformed monocotyledonous plants.
  • genes conferring tolerance to certain herbicides there may be mentioned the Bar gene conferring tolerance to bialaphos, the gene encoding an appropriate EPSPS conferring resistance to herbicides having EPSPS as target, such as glyphosate and its salts (U.S. Pat. Nos.
  • genes encoding an appropriate EPSPS conferring resistance to herbicides having EPSPS as target there may be mentioned more particularly the gene encoding a plant EPSPS, in particular from maize, having two mutations 102 and 106, which is described in patent application FR 2,736,926, called hereinafter double-mutant EPSPS, or alternatively the gene encoding an EPSPS isolated from Agrobacterium which is described by the sequences ID 2 and ID 3 of patent U.S. Pat. No. 5,633,435, called hereinafter CP4.
  • HPPD conferring tolerance to herbicides having HPPD as target
  • genes encoding an HPPD conferring tolerance to herbicides having HPPD as target there may be mentioned more particularly the HPPD from Pseudomonas and that from Arabidopsis, which are described in patent application WO 96/38567.
  • sequence encoding these enzymes is advantageously preceded by a sequence encoding a transit peptide, in particular the transit peptide called optimized transit peptide described in patents U.S. Pat. No. 5,510,471 or U.S. Pat. No. 5,633,448 whose content is incorporated herein by reference.
  • the chimeric gene according to the invention comprises, in the direction of transcription, a 5′ regulatory sequence according to the invention as defined above, functionally linked to a sequence encoding a fusion protein transit peptide/protein of interest, functionally linked to a 3′ regulatory sequence, the different elements of the chimeric gene being defined above, the protein of interest being preferably an enzyme conferring tolerance to certain herbicides, more preferably enzymes of the EPSPS or HPPD type defined above.
  • fusion protein OTP/CP4 For the fusion protein OTP/CP4, persons skilled in the art will know how to construct the corresponding gene by taking the sequence encoding the CP4 described in patent U.S. Pat. No. 5,633,435 and by following the procedure described in patents U.S. Pat. Nos. 4,940,835, 5,633,448 and FR 2,736,926 or in the examples below.
  • the present invention also relates to a chimeric gene comprising, in the direction of transcription, an appropriate 5′ regulatory sequence to ensure the expression of a heterologous gene in a plant cell, functionally linked to a sequence encoding a fusion protein OTP/CP4, functionally linked to a 3′ regulatory sequence.
  • the 5′ regulatory elements comprise not only the 5′ regulatory elements according to the invention defined above, but also all the appropriate regulatory elements for allowing the expression of heterologous genes in plant cells from monocotyledonous or dicotyledonous plants which are known to a person skilled in the art or of the future, and in particular those described above.
  • the present invention also relates to a cloning or expression vector for the transformation of a plant cell or of a monocotyledonous plant, the transformed plant cells and plants containing at least one chimeric gene as defined above.
  • the vector according to the invention comprises, in addition to the above chimeric gene, at least one replication origin.
  • This vector may consist of a plasmid, a cosmid, a bacteriophage or a virus, which are transformed by introducing the chimeric gene according to the invention.
  • Such vectors for transforming plant cells and monocotyledonous plants are well known to a person skilled in the art and are widely described in the literature.
  • the vector for transforming plant cells or plants according to the invention is a plasmid.
  • the subject of the invention is also a method of transforming plant cells by integrating at least one nucleic acid fragment or a chimeric gene as defined above, which transformation may be obtained by any appropriate known means with the vector according to the invention.
  • a series of methods consists in bombarding cells or cellular tissues with particles to which DNA sequences are attached. Another series of methods consists in using, as means of transfer into the plant, a chimeric gene inserted into an Agrobacterium tumefaciens Ti plasmid or an Agrobacterium rhizogenes Ri plasmid. Other methods may be used, such as microinjection or electroporation, or alternatively direct precipitation by means of PEG.
  • the subject of the present invention is also the plant cells or plants transformed and which contain at least one chimeric gene according to the invention defined above.
  • the subject of the present invention is also the plants containing transformed cells, in particular the plants regenerated from transformed cells.
  • the regeneration is obtained by any appropriate method which depends on the nature of the species.
  • the present invention also relates to the transformed plants derived from the culture and/or the crossing of the above regenerated plants, as well as the seeds of transformed plants.
  • the present invention also relates to a method of controlling weed in an area of a field comprising seeds or plants transformed with the said chimeric gene according to the invention, which method consists in applying to the said area of the field a dose of the said particular herbicide which is toxic to the said weed, without, however, substantially affecting the seeds or plants transformed with the said chimeric gene according to the invention comprising the said sequence encoding an enzyme conferring tolerance to the said particular herbicide.
  • the present invention also relates to a method of culturing the plants transformed according to the invention with a chimeric gene according to the invention comprising a sequence encoding an enzyme conferring tolerance to a particular herbicide defined above, which method consists in planting the seeds of the said transformed plants in an area of a field which is appropriate for the culture of the said plants, in applying to the said area of the said field a dose of the said particular herbicide which is toxic to weeds should weeds be present, without substantially affecting the said seeds or the said transformed plants, and then in harvesting the cultivated plants when they reach the desired maturity and optionally in separating the seeds from the harvested plants.
  • the application of the particular herbicide may be made according to the invention before sowing, before emergence and after emergence of the crop.
  • the enzyme for tolerance to a herbicide is an appropriate EPSPS, and in this case the herbicide is glyphosate or its salts, or the enzyme is an HPPD and the herbicide is chosen from the isoxazoles, in particular isoxafutole, the diketonitriles or the triketones, in particular sulcotrione.
  • the plasmids below are prepared so as to create an expression cassette comprising a maize H3C4 histone promoter combined with the untranslated 5′ region of the first intron of the rice actin gene (ActI) described by Mc Elroy D. et al. (Plant Molecular Biology 15: 257-268 (1990)) directing the expression of the gene OTP-HPPD of Pseudomonas fluorescens.
  • the plasmid pRPA-RD-195 is a derivative of the plasmid pUC-19 which contains a modified multiple cloning site.
  • the complementary oligonucleotides 1 and 2 below are hybridized at 65° C. for 5 minutes, followed by a slow cooling down to 30° C. over 30 minutes:
  • Oligo 4 5′ AGGGCCCCCT AGGGTTTAAA CGGCCAGTCA GGCCGAATTC GAGCTCGGTA CCCGGGGATC CTCTAGAGTC GACCTGCAGG CATGC 3′
  • Olizo 5 5′ CCCTGAACCA GGCTCGAGGG CGCGCCTTAA TTAAAAGCTT GCATGCCTGC AGGTCGACTC TAGAGG 3′
  • the hybridized oligonucleotides are made double-stranded using the Klenow fragment of DNA polymerase I of E. coli to extend the 3′ ends of each oligo using the standard conditions recommended by the manufacturer (New England Biolabs).
  • the double-stranded oligo obtained is then linked in the plasmid pUC-19 previously digested with the restriction enzymes EcoRI and HindIII and made blunt-ended using the Klenow fragment of DNA polymerase I of E. coli.
  • a cloning vector is thus obtained which comprises a multiple cloning site so as to facilitate the introduction of expression cassettes into a plasmid vector of Agrobacterium tumefaciens (FIG. 1).
  • the plasmid pRPA-RD-195 is digested with the restriction enzyme SacI and dephosphorylated with calf intestinal alkaline phosphatase (New England Biolabs).
  • the plasmid pRPA-RD-173 (described in patent FR 2,736,926) is digested with the restriction enzyme SacI and the DNA fragment containing the EPSPS gene is purified and linked into the plasmid pRPA-RD-195 prepared above.
  • the clone obtained contains several unique restriction sites flanking the double-mutant EPSPS gene.
  • the plasmid pRP-P contains the optimized transit peptide (OTP) linked to the HPPD of Pseudomonas fluorescens followed by the polyadenylation site of nopaline synthase as described in patent application WO 96/38567.
  • OTP optimized transit peptide
  • nopaline synthase (nos) terminator gene polyadenylation zone of the nos gene isolated from pTi 37, 250 bp; Bevan M. et al. Nucleics Acids Res. 11: 369-385).
  • the plasmid pRP-P is digested with the restriction enzyme BstEII, treated with the Klenow fragment of DNA polymerase I of E. coli in order to make the fragment blunt-ended, and followed by digestion with the restriction enzyme NcoI.
  • the DNA fragment obtained, containing the coding region OTP-HPPD about 1.5 kb, is then purified.
  • the plasmid pRPA-RD-2010 obtained above is digested with the restriction enzyme BlpI, treated with the Klenow fragment of DNA polymerase I of E. coli in order to obtain a blunt-ended fragment, and then digested with the restriction enzyme NcoI.
  • the DNA fragment obtained comprising the sequences of the plasmid vector, the H3C4 promoter combined with the untranslated 5′ region and the first intron of the rice actin gene, is purified and the NOS polyadenylation site is purified.
  • the two DNA fragments purified are linked so as to create an expression cassette OTP-HPPD comprising the maize H3C4 histone promoter (Brignon et al.) combined with the 5′ untranslated region and the first intron of the rice actin gene (ActI) (Act 5′ UTR +intron 1) in order to control the expression of the coding region OTP-HPPD incorporating the NOS polyadenylation site (NOS polyA) (FIG. 2).
  • the plasmid pRPA-RD-109 contains the ⁇ -glucuronidase (GUS) gene of E. coli controlled by the maize H3C4 histone promoter (Brignon et al.) combined with the 5′ untranslated region and the first intron of the rice actin gene (ActI) described by Mc Elroy D. et al. (Plant Molecular Biology 15: 257-268, 1990).
  • GUS ⁇ -glucuronidase
  • ActI rice actin gene
  • FIG. 3 A diagram of this plasmid is represented in FIG. 3.
  • the plasmid pRPA-RD-109 is digested with the restriction enzymes NcoI and EcoRI, and the large DNA fragment (about 5 kb) containing the vector sequence, the GUS gene and the NOS polyadenylation site is purified.
  • the plasmid pRPA-RD-2010 is digested with the restriction enzymes NcoI and EcoRI, and the DNA fragment (about 1.6 kb) containing the H3C4 promoter combined with the 5′ untranslated region and the first intron of the rice actin gene (ActI) is purified.
  • the two DNA fragments purified are linked in order to create an expression cassette OTP-double mutant EPSPS comprising the maize H3C4 histone promoter (Brignon et al.) combined with the 5′ untranslated region and the first intron of the rice actin gene (ActI) in order to control the expression of the coding region OTP-double mutant EPSPS incorporating the NOS polyadenylation site.
  • the phosphinothricin acetyl transferase (PAT) encoded by the bar gene is an enzyme which inactivates a herbicide, phosphinothricin (PPT). PPT inhibits the synthesis of glutamine and causes a rapid accumulation of ammonia in the cells, leading to their death (Tachibana et al. 1986).
  • the plasmid used to introduce the tolerance to phosphinothricin as selection agent is obtained by inserting the chimeric gene pDM 302 into the vector pSP72 of 2462 bp, marketed by Promega Corp. (Genbank/DDBJ database accession number X65332) and containing the gene for resistance to ampicillin.
  • the first intron of the rice actin gene consisting of 450 bp;
  • the terminator of the nopaline synthase (nos) gene polyadenylation zone of the nos gene isolated from pTi 37, 250 bp; (Bevan M. et al. Nucleics Acids Res. 11: 369-385).
  • the particle bombardment technique is used to introduce the genetic construct.
  • the plasmids are purified on a Qiagen column and coprecipitated on M10 tungsten particles according to the Klein method (Nature 327: 70-73, 1987).
  • the bombarded calli are selected on glufosinate until green sectors appear.
  • the glufosinate-resistant positive calli are then converted to somatic embryos, and then placed under conditions which promote germination according to the operating conditions described by Gordon-Kamm, W.J. et al. ( Transformation of Maize Cells and Regeneration of Fertile Transgenic Plants, The Plant Cell, vol. 2, 603-618, July 1990).
  • the young plants are transferred to a greenhouse for the production of seeds.
  • the transformed plants obtained above are assumed in part to be transgenic, comprising a heterologous gene encoding OTP/HPPD conferring tolerance to isoxazoles such as isoxafutole. These transformed plants produced pollen, which fertilized ovules from a nontransgenic wild-type maize. The seeds obtained are selected on sand after treating with isoxaflutole.
  • the selection protocol is the following:
  • Rice actin intron according to the invention 8/20 lines are tolerant
  • Maize adh I intron 3/20 lines are tolerant
  • the results above demonstrate that the combination of the maize H3C4 promoter with the first intron of rice actin according to the invention substantially enhances the expression of a protein of interest in transformed monocotyledonous plants compared with the combination of the same maize H3C4 promoter with another intron of the state of the art.

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Abstract

The present invention relates to a DNA sequence, a 5′ regulatory element allowing the expression of a heterologous gene in a plant cell from a monocotyledonous plant, characterized in that it comprises, in the direction of transcription, a first DNA sequence, which is a functional fragment of the sequence of the maize H3C4 promoter, and a second DNA sequence, which is a functional fragment of the sequence of the first intron of rice actin.
The invention also relates to a chimeric gene comprising the said DNA sequence and the plants transformed with the said gene.

Description

  • The present invention relates to a new 5′ regulatory sequence allowing the expression, in monocotyledonous plants, of a sequence heterologous to the said regulatory sequence, encoding a protein of interest. The present invention also relates to a chimeric gene comprising the said regulatory sequence, a heterologous sequence encoding a protein of interest and a 3′ regulatory sequence allowing the expression of the protein of interest in a plant cell from a monocotyledonous plant, as well as a transformed monocotyledonous plant comprising the said chimeric gene and the means necessary for the transformation of plant cells and of plants. [0001]
  • Various promoters allowing the expression of sequences encoding proteins of interest in plants are known, are described in the literature, and have already allowed the development, to a commercial stage, of plants modified by genetic engineering. They are promoter sequences of genes which are expressed naturally in plants, in particular promoters of bacterial, viral or plant origin such as, for example, that of a gene for the ribulose bisphosphate carboxylase/oxygenase small subunit (U.S. Pat. No. 4,962,028) or of a gene of a plant virus such as, for example, that of cauliflower mosaic (U.S. Pat. No. 5,352,605). Promoters allowing the expression of heterologous genes in plants are in particular described in the following patents and patent applications: U.S. Pat. No. 5,086,169, EP 0 353 908, 5,139,954, 5,378,619, 5,563,328, 5,589,583, 5,633,363, 5,633,439, 5,633,440, 5,633,447, 5,635,618, 5,639,948 and 5,639,952. [0002]
  • However, some of these promoters, and more particularly the promoters of plant origin, are not functional in monocotyledonous plants. [0003]
  • Arabidopsis sp. histone promoters described in patent application EP 0,507,698 are for example known which are particularly efficient for allowing the expression of a heterologous gene in dicotyledonous plants such as tobacco, oil seed rape or soya bean, which are not functional in monocotyledonous plants such as maize. [0004]
  • The rice actin promoter is a promoter known to allow the expression of heterologous genes in monocotyledonous plants (U.S. Pat. No. 5,641,876). However, the problem of identifying new functional 5′ regulatory sequences for the expression of heterologous sequences in monocotyledonous plants still remains. [0005]
  • The present invention relates to a new DNA sequence, a 5′ regulatory element allowing the expression of a heterologous gene in a plant cell from a monocotyledonous plant, the said DNA sequence comprising, in the direction of transcription, a first DNA sequence, which is a functional fragment of the sequence of the maize H3C4 promoter, and a second DNA sequence, which is a functional fragment of the sequence of the first intron of rice actin. [0006]
  • The sequence of the maize H3C4 promoter is in particular described by Brignon et al. (Plant. Mol. Biol., 22: 1007-1015, 1993). It is the AluI fragment of the maize H3C4 promoter, of about 1 kb, corresponding to bases −7 to −1029 relative to the ATG of the sequence encoding the maize histone H3C4. [0007]
  • The sequence of the first intron of rice actin is in particular described in patent U.S. Pat. No. 5,641,876. [0008]
  • Functional fragment is understood according to the invention to mean any DNA sequence derived from the sequence of the maize H3C4 promoter or from the sequence of the first intron of rice actin, which reproduces the function of the sequence from which it is derived. [0009]
  • According to one embodiment of the invention, the functional fragment of the sequence of the maize H3C4 promoter comprises the DNA sequence described by the sequence identifier No. 1 (SEQ ID NO: 1) or a sequence homologous to the said sequence. Preferably, the functional fragment of the sequence of the maize H3C4 promoter consists of the DNA sequence described by the sequence identifier No. 1. [0010]
  • According to one embodiment of the invention, the functional fragment of the first intron of rice actin comprises the DNA sequence described by the sequence identifier No. 2 (SEQ ID NO: 2) or a sequence homologous to the said sequence. Preferably, the functional fragment of the first intron of rice actin consists of the DNA sequence described by the sequence identifier No. 2. [0011]
  • The DNA sequence, a 5′ regulatory element, according to the invention may comprise, in addition, between the first and second DNA sequences, neutral DNA fragments which are generally necessary for the construction of the sequence according to the invention. These are DNA fragments comprising up to 30 base pairs, preferably up to 20 base pairs. Neutral DNA fragments are understood according to the invention to mean DNA fragments which do not substantially modify the respective functions of the first and second DNA sequences of the sequence according to the invention. [0012]
  • According to a preferred embodiment of the invention, the DNA sequence according to the invention comprises the DNA sequence represented by the sequence identifier No. 3 (SEQ ID NO: 3) or a sequence homologous to the said sequence. More preferably, the sequence according to the invention consists of the DNA sequence represented by the sequence identifier No. 3. “Homologue” is understood according to the invention to mean a DNA sequence representing one or more sequence modifications relative to the reference DNA sequence described by the sequence identifier No. 1, 2 or 3, and reproducing the function of the abovementioned sequences. These modifications may be obtained according to the customary mutation techniques, or alternatively by choosing the synthetic oligonucleotides which may be used in the preparation of the said sequence by hybridization. Advantageously, the degree of homology will be at least 70% relative to the reference sequence, preferably at least 80%, more preferably at least 90%. [0013]
  • The present invention also relates to a chimeric gene (or an expression cassette) comprising a coding sequence as well as heterologous regulatory elements at the 5′ and 3′ positions capable of functioning in plant cells from monocotyledonous plants, in which the 5′ regulatory elements comprise the DNA sequence according to the invention defined above. [0014]
  • “Plant cell” is understood to mean according to the invention any cell derived from a monocotyledonous plant and capable of constituting undifferentiated tissues such as calli, differentiated tissues such as embryos, monocotyledonous plant portions, monocotyledonous plants or seeds. “Monocotyledonous plant” is understood according to the invention to mean any differentiated multicellular organism capable of photosynthesis, more particularly crop plants intended or otherwise as animal feed or for human consumption, such as for example wheat, barley, oats, rice, maize, sorghum, sugar cane and the like. [0015]
  • According to the invention, it is also possible to use, in combination with the regulatory promoter sequence according to the invention, other regulatory sequences, which are situated between the promoter and the coding sequence, such as the sequences encoding transit peptides, either single, or double, and in this case optionally separated by an intermediate sequence, that is to say comprising, in the direction of transcription, a sequence encoding a transit peptide for a plant gene encoding a plastid localization enzyme, a portion of sequence of the mature N-terminal portion of a plant gene encoding a plastid localization enzyme, and then a sequence encoding a second transit peptide for a plant gene encoding a plastid localization enzyme consisting of a portion of sequence of the mature N-terminal portion of a plant gene encoding a plastid localization enzyme, as described in application EP 0,508,909. As transit peptide, there may also be mentioned the signal peptide for the tobacco PR-1a gene described by Cornelissen et al. [0016]
  • As regulatory terminator or polyadenylation sequence, there may be used any corresponding sequence of bacterial origin, such as for example the Agrobacterium tumefaciens nos terminator, or alternatively of plant origin, such as for example a histone terminator as described in application EP 0,633,317. [0017]
  • The coding sequence of the chimeric gene according to the invention may comprise any sequence encoding the protein of interest which it is desired to express in a plant cell or a monocotyledonous plant. [0018]
  • This may be a gene encoding a selectable marker such as a gene conferring on the transformed monocotyledonous plant new agronomic properties, or a gene for enhancing the agronomic quality of the transformed monocotyledonous plant. [0019]
  • Among the genes encoding selectable markers, there may be mentioned genes for resistance to antibiotics, genes for tolerance to herbicides (bialaphos, glyphosate or isoxazoles), genes encoding easily identifiable enzymes such as the enzyme GUS, genes encoding pigments or enzymes regulating the production of pigments in the transformed cells. Such selectable marker genes are in particular described in patent applications WO 91/02071 and WO 95/06128. [0020]
  • Among the genes conferring new agronomic properties on transformed monocotyledonous plants, there may be mentioned the genes conferring tolerance to certain herbicides, those conferring tolerance to certain insects, those conferring tolerance to certain diseases and the like. Such genes are in particular described in patent applications WO 91/02071 and Wo 95/06128. [0021]
  • As regulatory terminator or polyadenylation sequence, there may be used any corresponding sequence of bacterial origin, such as for example the [0022] Agrobacterium tumefaciens nos terminator, or alternatively of plant origin, such as for example a histone terminator as described in application EP 0,633317.
  • The present invention is particularly appropriate for the expression of genes conferring tolerance to certain herbicides on transformed plant cells and on transformed monocotyledonous plants. Among the genes conferring tolerance to certain herbicides, there may be mentioned the Bar gene conferring tolerance to bialaphos, the gene encoding an appropriate EPSPS conferring resistance to herbicides having EPSPS as target, such as glyphosate and its salts (U.S. Pat. Nos. 4,535,060, 4,769,061, 5,094,945, 4,940,835, 5,188,642, 4,971,908, 5,145,783, 5,310,667, 5,312,910, 5,627,061, 5,633,435, FR 2,736,926), the gene encoding glyphosate oxydoreductase (U.S. Pat. No. 5,463,175), or alternatively a gene encoding an HPPD conferring tolerance to herbicides having HPPD as target, such as the isoxazoles, in particular isoxafutole (FR 95 06800, FR 95 13570), the diketonitriles (EP 496 630, EP 496 631) or the triketones, in particular sulcotrione (EP 625 505, EP 625 508, U.S. Pat. No. 5,506,195). Such genes encoding an HPPD conferring tolerance to herbicides having HPPD as target are described in patent application WO 96/38567 and in unpublished patent application FR 97 14264, filed on 7 Nov. 1997, whose content is incorporated herein by reference. [0023]
  • Among the genes encoding an appropriate EPSPS conferring resistance to herbicides having EPSPS as target, there may be mentioned more particularly the gene encoding a plant EPSPS, in particular from maize, having two mutations 102 and 106, which is described in patent application FR 2,736,926, called hereinafter double-mutant EPSPS, or alternatively the gene encoding an EPSPS isolated from Agrobacterium which is described by the sequences ID 2 and ID 3 of patent U.S. Pat. No. 5,633,435, called hereinafter CP4. [0024]
  • Among the genes encoding an HPPD conferring tolerance to herbicides having HPPD as target, there may be mentioned more particularly the HPPD from Pseudomonas and that from Arabidopsis, which are described in patent application WO 96/38567. [0025]
  • In the case of the genes encoding EPSPS or HPPD, and more particularly for the above genes, the sequence encoding these enzymes is advantageously preceded by a sequence encoding a transit peptide, in particular the transit peptide called optimized transit peptide described in patents U.S. Pat. No. 5,510,471 or U.S. Pat. No. 5,633,448 whose content is incorporated herein by reference. [0026]
  • According to a preferred embodiment of the invention, the chimeric gene according to the invention comprises, in the direction of transcription, a 5′ regulatory sequence according to the invention as defined above, functionally linked to a sequence encoding a fusion protein transit peptide/protein of interest, functionally linked to a 3′ regulatory sequence, the different elements of the chimeric gene being defined above, the protein of interest being preferably an enzyme conferring tolerance to certain herbicides, more preferably enzymes of the EPSPS or HPPD type defined above. [0027]
  • Sequences encoding fusion proteins transit peptide/EPSPS, and more particularly OTP/double-mutant EPSPS are in particular described in patents U.S. Pat. Nos. 4,940,835, 5,633,448 and FR 2 736 926. [0028]
  • For the fusion protein OTP/CP4, persons skilled in the art will know how to construct the corresponding gene by taking the sequence encoding the CP4 described in patent U.S. Pat. No. 5,633,435 and by following the procedure described in patents U.S. Pat. Nos. 4,940,835, 5,633,448 and FR 2,736,926 or in the examples below. The present invention also relates to a chimeric gene comprising, in the direction of transcription, an appropriate 5′ regulatory sequence to ensure the expression of a heterologous gene in a plant cell, functionally linked to a sequence encoding a fusion protein OTP/CP4, functionally linked to a 3′ regulatory sequence. The 5′ regulatory elements comprise not only the 5′ regulatory elements according to the invention defined above, but also all the appropriate regulatory elements for allowing the expression of heterologous genes in plant cells from monocotyledonous or dicotyledonous plants which are known to a person skilled in the art or of the future, and in particular those described above. [0029]
  • The sequences encoding fusion proteins transit peptide/HPPD are described in patent application WO 96/38567. [0030]
  • The present invention also relates to a cloning or expression vector for the transformation of a plant cell or of a monocotyledonous plant, the transformed plant cells and plants containing at least one chimeric gene as defined above. The vector according to the invention comprises, in addition to the above chimeric gene, at least one replication origin. This vector may consist of a plasmid, a cosmid, a bacteriophage or a virus, which are transformed by introducing the chimeric gene according to the invention. Such vectors for transforming plant cells and monocotyledonous plants are well known to a person skilled in the art and are widely described in the literature. Preferably, the vector for transforming plant cells or plants according to the invention is a plasmid. [0031]
  • The subject of the invention is also a method of transforming plant cells by integrating at least one nucleic acid fragment or a chimeric gene as defined above, which transformation may be obtained by any appropriate known means with the vector according to the invention. [0032]
  • A series of methods consists in bombarding cells or cellular tissues with particles to which DNA sequences are attached. Another series of methods consists in using, as means of transfer into the plant, a chimeric gene inserted into an [0033] Agrobacterium tumefaciens Ti plasmid or an Agrobacterium rhizogenes Ri plasmid. Other methods may be used, such as microinjection or electroporation, or alternatively direct precipitation by means of PEG.
  • Persons skilled in the art will choose the appropriate method according to the nature of the plant cell or of the plant. [0034]
  • The subject of the present invention is also the plant cells or plants transformed and which contain at least one chimeric gene according to the invention defined above. [0035]
  • The subject of the present invention is also the plants containing transformed cells, in particular the plants regenerated from transformed cells. The regeneration is obtained by any appropriate method which depends on the nature of the species. [0036]
  • For the methods of transforming plant cells and of regenerating monocotyledonous plants, there may be mentioned in particular Gordon-Kamm, W.J. et al. (Transformation of Maize Cells and Regeneration of [0037] Fertile Transgenic Plants, The Plant Cell, vol. 2, 603-618, July 1990), whose content is incorporated herein by reference, and the following patents and patent applications: U.S. Pat. Nos. 5,177,010, 5,187,073, EP 267,159, EP 604 662, EP 672 752, U.S. Pat. Nos. 4,945,050, 5,036,006, 5,100,792, 5,371,014, 5,478,744, 5,484,956, 5,508,468, 5,538,877, 5,554,798, 5,489,520, 5,510,318, 5,204,253, 5,405,765, EP 442 174, EP 486 233, EP 486 234, EP 539 563, EP 674 725, WO 91/02071 and WO 95/06128.
  • The present invention also relates to the transformed plants derived from the culture and/or the crossing of the above regenerated plants, as well as the seeds of transformed plants. [0038]
  • In the case where the chimeric gene according to the invention comprises a sequence encoding an enzyme conferring tolerance to a particular herbicide, the present invention also relates to a method of controlling weed in an area of a field comprising seeds or plants transformed with the said chimeric gene according to the invention, which method consists in applying to the said area of the field a dose of the said particular herbicide which is toxic to the said weed, without, however, substantially affecting the seeds or plants transformed with the said chimeric gene according to the invention comprising the said sequence encoding an enzyme conferring tolerance to the said particular herbicide. [0039]
  • The present invention also relates to a method of culturing the plants transformed according to the invention with a chimeric gene according to the invention comprising a sequence encoding an enzyme conferring tolerance to a particular herbicide defined above, which method consists in planting the seeds of the said transformed plants in an area of a field which is appropriate for the culture of the said plants, in applying to the said area of the said field a dose of the said particular herbicide which is toxic to weeds should weeds be present, without substantially affecting the said seeds or the said transformed plants, and then in harvesting the cultivated plants when they reach the desired maturity and optionally in separating the seeds from the harvested plants. [0040]
  • In the above two methods, the application of the particular herbicide may be made according to the invention before sowing, before emergence and after emergence of the crop. [0041]
  • Advantageously, the enzyme for tolerance to a herbicide is an appropriate EPSPS, and in this case the herbicide is glyphosate or its salts, or the enzyme is an HPPD and the herbicide is chosen from the isoxazoles, in particular isoxafutole, the diketonitriles or the triketones, in particular sulcotrione. [0042]
  • The examples below make it possible to illustrate the invention without seeking to limit its scope. [0043]
  • 1. Construction of a Chimeric Gene with a Sequence Encoding an HPPD: [0044]
  • The plasmids below are prepared so as to create an expression cassette comprising a maize H3C4 histone promoter combined with the untranslated 5′ region of the first intron of the rice actin gene (ActI) described by Mc Elroy D. et al. (Plant Molecular Biology 15: 257-268 (1990)) directing the expression of the gene OTP-HPPD of Pseudomonas fluorescens. [0045]
  • PRPA-RD-195 [0046]
  • The plasmid pRPA-RD-195 is a derivative of the plasmid pUC-19 which contains a modified multiple cloning site. The [0047] complementary oligonucleotides 1 and 2 below are hybridized at 65° C. for 5 minutes, followed by a slow cooling down to 30° C. over 30 minutes:
  • Oligo 4: 5′ AGGGCCCCCT AGGGTTTAAA CGGCCAGTCA GGCCGAATTC GAGCTCGGTA CCCGGGGATC CTCTAGAGTC GACCTGCAGG CATGC 3′ [0048]
  • Olizo 5: 5′ CCCTGAACCA GGCTCGAGGG CGCGCCTTAA TTAAAAGCTT GCATGCCTGC AGGTCGACTC TAGAGG 3′ [0049]
  • The hybridized oligonucleotides are made double-stranded using the Klenow fragment of DNA polymerase I of [0050] E. coli to extend the 3′ ends of each oligo using the standard conditions recommended by the manufacturer (New England Biolabs). The double-stranded oligo obtained is then linked in the plasmid pUC-19 previously digested with the restriction enzymes EcoRI and HindIII and made blunt-ended using the Klenow fragment of DNA polymerase I of E. coli. A cloning vector is thus obtained which comprises a multiple cloning site so as to facilitate the introduction of expression cassettes into a plasmid vector of Agrobacterium tumefaciens (FIG. 1).
  • pRPA-RD-2010 [0051]
  • Insertion of the sequence “H4A748 promoter-OTP-double mutant EPSPS gene” of pRPA-RD-159 into the plasmid pRPA-RD-195. [0052]
  • The plasmid pRPA-RD-195 is digested with the restriction enzyme SacI and dephosphorylated with calf intestinal alkaline phosphatase (New England Biolabs). The plasmid pRPA-RD-173 (described in patent FR 2,736,926) is digested with the restriction enzyme SacI and the DNA fragment containing the EPSPS gene is purified and linked into the plasmid pRPA-RD-195 prepared above. The clone obtained contains several unique restriction sites flanking the double-mutant EPSPS gene. [0053]
  • pRPA-RD-1002 [0054]
  • Creation of an expression cassette OTP-HPPD for use in monocotyledonous plants. The plasmid pRP-P contains the optimized transit peptide (OTP) linked to the HPPD of Pseudomonas fluorescens followed by the polyadenylation site of nopaline synthase as described in patent application WO 96/38567. The components of the plasmid pRP-P are the following: [0055]
  • the optimized transit peptide (OTP) described in patents U.S. Pat. No. 5,510,471 and No. 5,633,448; this OTP consisting of 171 bp of the [0056] Helianthus annuus ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit transit peptide (Waksman G. et al. 1987. Nucleics Acids Res. 15: 7181) which are followed by the 66 bp of the mature portion of the Zea mays ribulose 1,5-bisposphate carboxylase/oxygenase small subunit (Lebrun et al. 1987. Nucleics Acids Res. 15: 4360) which are themselves followed by the 150 bp of the Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit transit peptide (Lebrun et al. 1987. Nucleics Acids Res. 15: 4360); the combination is therefore 387 bp;
  • the coding region of the HPPD of [0057] Pseudomonas fluorescens described in patent application WO 96/38567; and
  • the nopaline synthase (nos) terminator gene (polyadenylation zone of the nos gene isolated from pTi 37, 250 bp; Bevan M. et al. Nucleics Acids Res. 11: 369-385). [0058]
  • The plasmid pRP-P is digested with the restriction enzyme BstEII, treated with the Klenow fragment of DNA polymerase I of [0059] E. coli in order to make the fragment blunt-ended, and followed by digestion with the restriction enzyme NcoI. The DNA fragment obtained, containing the coding region OTP-HPPD about 1.5 kb, is then purified. The plasmid pRPA-RD-2010 obtained above is digested with the restriction enzyme BlpI, treated with the Klenow fragment of DNA polymerase I of E. coli in order to obtain a blunt-ended fragment, and then digested with the restriction enzyme NcoI. The DNA fragment obtained, comprising the sequences of the plasmid vector, the H3C4 promoter combined with the untranslated 5′ region and the first intron of the rice actin gene, is purified and the NOS polyadenylation site is purified. The two DNA fragments purified are linked so as to create an expression cassette OTP-HPPD comprising the maize H3C4 histone promoter (Brignon et al.) combined with the 5′ untranslated region and the first intron of the rice actin gene (ActI) (Act 5′ UTR +intron 1) in order to control the expression of the coding region OTP-HPPD incorporating the NOS polyadenylation site (NOS polyA) (FIG. 2).
  • 2. Construction of a Chimeric Gene with a Sequence Encoding the Double-Mutant EPSPS [0060]
  • pRPA-RD-1010 [0061]
  • Creation of an expression cassette OTP-double mutant EPSPS for use in monocotyledonous plants. [0062]
  • The plasmid pRPA-RD-109 contains the β-glucuronidase (GUS) gene of [0063] E. coli controlled by the maize H3C4 histone promoter (Brignon et al.) combined with the 5′ untranslated region and the first intron of the rice actin gene (ActI) described by Mc Elroy D. et al. (Plant Molecular Biology 15: 257-268, 1990). A diagram of this plasmid is represented in FIG. 3. The plasmid pRPA-RD-109 is digested with the restriction enzymes NcoI and EcoRI, and the large DNA fragment (about 5 kb) containing the vector sequence, the GUS gene and the NOS polyadenylation site is purified. The plasmid pRPA-RD-2010 is digested with the restriction enzymes NcoI and EcoRI, and the DNA fragment (about 1.6 kb) containing the H3C4 promoter combined with the 5′ untranslated region and the first intron of the rice actin gene (ActI) is purified. The two DNA fragments purified are linked in order to create an expression cassette OTP-double mutant EPSPS comprising the maize H3C4 histone promoter (Brignon et al.) combined with the 5′ untranslated region and the first intron of the rice actin gene (ActI) in order to control the expression of the coding region OTP-double mutant EPSPS incorporating the NOS polyadenylation site.
  • 3. Construction of a Chimeric Gene For Tolerance to Phosphinothricin (Bar Gene) [0064]
  • The phosphinothricin acetyl transferase (PAT) encoded by the bar gene is an enzyme which inactivates a herbicide, phosphinothricin (PPT). PPT inhibits the synthesis of glutamine and causes a rapid accumulation of ammonia in the cells, leading to their death (Tachibana et al. 1986). [0065]
  • The plasmid used to introduce the tolerance to phosphinothricin as selection agent is obtained by inserting the chimeric gene pDM 302 into the vector pSP72 of 2462 bp, marketed by Promega Corp. (Genbank/DDBJ database accession number X65332) and containing the gene for resistance to ampicillin. [0066]
  • The plasmid pDM 302 of 4700 bp has been described by Cao, J., et al. Plant Cell Report 11: 586-591 (1992). [0067]
  • The various components of this plasmid are: [0068]
  • the promoter of the rice actin gene described by Mc Elroy D. et al. Plant Molecular Biology 15: 257-268 (1990) consisting of 840 bp; [0069]
  • the first exon of the rice actin gene consisting of 80 bp; [0070]
  • the first intron of the rice actin gene consisting of 450 bp; [0071]
  • the region encoding the bar gene of 600 bp excised from the plasmid pIJ41404 described by White J. et al. Nuc. Acids Res. 18: 1862 (1990); [0072]
  • the terminator of the nopaline synthase (nos) gene (polyadenylation zone of the nos gene isolated from pTi 37, 250 bp; (Bevan M. et al. Nucleics Acids Res. 11: 369-385). [0073]
  • 4. Transformation of Maize Cells [0074]
  • The particle bombardment technique is used to introduce the genetic construct. The plasmids are purified on a Qiagen column and coprecipitated on M10 tungsten particles according to the Klein method (Nature 327: 70-73, 1987). [0075]
  • A mixture of metal particles, of the plasmid pRPA-RD-1002 and of the plasmid of Example 3 which are described above, is then bombarded onto embryogenic maize cells according to the protocol described by Gordon-Kamm, W.J. et al. ([0076] Transformation of Maize Cells and Regeneration of Fertile Transgenic Plants, The Plant Cell, vol. 2, 603-618, July 1990).
  • 5. Regeneration and Use of the Bar Gene as Selection Agent [0077]
  • The bombarded calli are selected on glufosinate until green sectors appear. The glufosinate-resistant positive calli are then converted to somatic embryos, and then placed under conditions which promote germination according to the operating conditions described by Gordon-Kamm, W.J. et al. ([0078] Transformation of Maize Cells and Regeneration of Fertile Transgenic Plants, The Plant Cell, vol. 2, 603-618, July 1990). The young plants are transferred to a greenhouse for the production of seeds.
  • 6. Analysis of the Progeny of the Transformed Plants [0079]
  • The transformed plants obtained above are assumed in part to be transgenic, comprising a heterologous gene encoding OTP/HPPD conferring tolerance to isoxazoles such as isoxafutole. These transformed plants produced pollen, which fertilized ovules from a nontransgenic wild-type maize. The seeds obtained are selected on sand after treating with isoxaflutole. The selection protocol is the following: [0080]
  • 800 ml of Fontainebleau sand are placed in a tub of sides 15×20 cm. These tubs are then sprinkled with water and kept moist by supplying a nutrient solution consisting of 5 ml of Quinoligo (Quinoline) per litre of water. Twenty maize seeds are placed in the tubs, which are then treated with isoxaflutole by spraying at a rate of 100 g of active material per hectare (300 μg of active material per tub). The tubs are then cultured in a greenhouse. The phytotoxicity is determined 14 [lacuna] after planting. According to the above conditions, the nontransformed plants exhibit 100% phytotoxicity whereas the transformed plants exhibit no phytotoxicity. [0081]
  • A comparative study was carried out with 20 maize lines transformed according to the invention and 20 maize lines transformed with a corresponding gene for which the sequence encoding the first intron of rice actin has been replaced with the sequence encoding the maize adh I intron. After treating by spraying very high doses of isoxafutole at a rate of 200 g of active material per hectare (600 μg of active material per tub), the following results are obtained: [0082]
  • Rice actin intron according to the invention: 8/20 lines are tolerant [0083]
  • Maize adh I intron: 3/20 lines are tolerant The results above demonstrate that the combination of the maize H3C4 promoter with the first intron of rice actin according to the invention substantially enhances the expression of a protein of interest in transformed monocotyledonous plants compared with the combination of the same maize H3C4 promoter with another intron of the state of the art. [0084]
  • 1 5 1021 base pairs nucleic acid single linear DNA (genomic) 1 CTTATGTGCA CCATTTACTG TAATGCATAA TCATTTAATT GAATAGCAAA CTTTTCTATT 60 ACTTCTTTAC TAACATAATT CTTGGTTTTA AAATTCAGTC CTCAACATTC ATTGCTCAAG 120 TATAAGTTGA GACTGTCAAA ATTTACTATT TTATTTCTTC ATATTTTTTT TCCTTATACA 180 CATTTTGGGC CTTACAATCC ATCATCTATA TCCATCCTTT CCGGTGTCCT CTAAAAGATT 240 CCATCCTCTG AATCTTATTC CTCTCCAATA ACGTTCTCTA AATCAGGTCT CTATAAGCAA 300 TACCTATATT AGAGACATTT TTTATTTTTT GTACATACAT ATTTGTCATA CTCTCAAATG 360 CATTATACAT ATTTAGTTTT ACTAAACCGA TTATTTAAAG TATTCAAACG GATGAAGAAC 420 TGTTTAGATA AATTCTATAT ATAGAGAATC CAGTAGCGTT CTCTAAATTT AGATGATTAT 480 TTAGAGGACG CTGTTAGAAA ACGTAAAAAA TTCTTTGATT ATTTATATTT AGGGTAGAGT 540 AGCCTTTATG CTTTATAGAT CTTTGGTGGA CCCAGCCTTA TACCGGTTAT TTTCGCGATT 600 GCGCCTCTCA TTTTCACTCC AGCGCCCCAC ATTTTCACGT TTTCACCGAA GCGCCCAGCC 660 TGCCTAACCA ACAAATTGGT ACGGTGGCGC GGTTTTCAAA AGAAGTCGGA AACCATCTGC 720 ACCCACCGAC TAGTAGGCCC TCGGATCCTC CCTGATTAAG TCCTAGCCAA TAGGAGCCCA 780 GAACCACCCA TCACGCGGAT CGTCCCTACG CTTCCACCTC ATCGGCGCCG TCCATCTCCA 840 TCCAACACCT ATTCCGTTAC CTTGCCCATC CTCCGAAAAA ATTCTCGGCT CGCGCTCCGC 900 ACCTACTACA AATACCCATC CCATCACGAC GCATCGCATC ACTGCCAAAT CCCCCAGAAA 960 ATCAACACCT CCCAATTCCA CGCTGCCACC AACTCGCCGT CCTCCGCGCC AAGCACCAAA 1020 G 1021 454 base pairs nucleic acid single linear DNA (genomic) 2 GTAACCACCC CGCCCCTCTC CTCTTTCTTT CTCCGTTTTT TTTTTCGTCT CGGTCTCGAT 60 CTTTGGCCTT GGTAGTTTGG GTGGGCGAGA GCGGCTTCGT CGCCCAGATC GGTGCGCGGG 120 AGGGGCGGGA TCTCGCGGCT GGCGTCTCCG GGCGTGAGTC GGCCCGGATC CTCGCGGGGA 180 ATGGGGCTCT CGGATGTAGA TCTGATCCGC CGTTGTTGGG GGAGATGATG GGGCGTTTAA 240 AATTTCGCCA TGCTAAACAA GATCAGGAAG AGGGGAAAAG GGCACTATGG TTTATATTTT 300 TATATATTTC TGCTGCTGCT CGTCAGGCTT AGATGTGCTA GATCTTTCTT TCTTCTTTTT 360 GTGGGTAGAA TTTGAATCCC TCAGCATTGT TCATCGGTAG TTTTTCTTTT CATGATTTGT 420 GACAAATGCA GCCTCGTGCG GAGCTTTTTT GTAG 454 1565 base pairs nucleic acid single linear DNA (genomic) 3 GAATTCCTGC AGGTCGACGG ATCCCCCTTA TGTGCACCAT TTACTGTAAT GCATAATCAT 60 TTAATTGAAT AGCAAACTTT TCTATTACTT CTTTACTAAC ATAATTCTTG GTTTTAAAAT 120 TCAGTCCTCA ACATTCATTG CTCAAGTATA AGTTGAGACT GTCAAAATTT ACTATTTTAT 180 TTCTTCATAT TTTTTTTCCT TATACACATT TTGGGCCTTA CAATCCATCA TCTATATCCA 240 TCCTTTCCGG TGTCCTCTAA AAGATTCCAT CCTCTGAATC TTATTCCTCT CCAATAACGT 300 TCTCTAAATC AGGTCTCTAT AAGCAATACC TATATTAGAG ACATTTTTTA TTTTTTGTAC 360 ATACATATTT GTCATACTCT CAAATGCATT ATACATATTT AGTTTTACTA AACCGATTAT 420 TTAAAGTATT CAAACGGATG AAGAACTGTT TAGATAAATT CTATATATAG AGAATCCAGT 480 AGCGTTCTCT AAATTTAGAT GATTATTTAG AGGACGCTGT TAGAAAACGT AAAAAATTCT 540 TTGATTATTT ATATTTAGGG TAGAGTAGCC TTTATGCTTT ATAGATCTTT GGTGGACCCA 600 GCCTTATACC GGTTATTTTC GCGATTGCGC CTCTCATTTT CACTCCAGCG CCCCACATTT 660 TCACGTTTTC ACCGAAGCGC CCAGCCTGCC TAACCAACAA ATTGGTACGG TGGCGCGGTT 720 TTCAAAAGAA GTCGGAAACC ATCTGCACCC ACCGACTAGT AGGCCCTCGG ATCCTCCCTG 780 ATTAAGTCCT AGCCAATAGG AGCCCAGAAC CACCCATCAC GCGGATCGTC CCTACGCTTC 840 CACCTCATCG GCGCCGTCCA TCTCCATCCA ACACCTATTC CGTTACCTTG CCCATCCTCC 900 GAAAAAATTC TCGGCTCGCG CTCCGCACCT ACTACAAATA CCCATCCCAT CACGACGCAT 960 CGCATCACTG CCAAATCCCC CAGAAAATCA ACACCTCCCA ATTCCACGCT GCCACCAACT 1020 CGCCGTCCTC CGCGCCAAGC ACCAAAGGAA TTGGCCGCCA CCGCGGTGGA GCTCCTCCCC 1080 CCTCCCCCTC CGCCGCCGCC GGTAACCACC CCGCCCCTCT CCTCTTTCTT TCTCCGTTTT 1140 TTTTTTCGTC TCGGTCTCGA TCTTTGGCCT TGGTAGTTTG GGTGGGCGAG AGCGGCTTCG 1200 TCGCCCAGAT CGGTGCGCGG GAGGGGCGGG ATCTCGCGGC TGGCGTCTCC GGGCGTGAGT 1260 CGGCCCGGAT CCTCGCGGGG AATGGGGCTC TCGGATGTAG ATCTGATCCG CCGTTGTTGG 1320 GGGAGATGAT GGGGCGTTTA AAATTTCGCC ATGCTAAACA AGATCAGGAA GAGGGGAAAA 1380 GGGCACTATG GTTTATATTT TTATATATTT CTGCTGCTGC TCGTCAGGCT TAGATGTGCT 1440 AGATCTTTCT TTCTTCTTTT TGTGGGTAGA ATTTGAATCC CTCAGCATTG TTCATCGGTA 1500 GTTTTTCTTT TCATGATTTG TGACAAATGC AGCCTCGTGC GGAGCTTTTT TGTAGGTAGA 1560 CCATG 1565 85 base pairs nucleic acid single linear DNA (genomic) 4 AGGGCCCCCT AGGGTTTAAA CGGCCAGTCA GGCCGAATTC GAGCTCGGTA CCCGGGGATC 60 CTCTAGAGTC GACCTGCAGG CATGC 85 66 base pairs nucleic acid single linear DNA (genomic) 5 CCCTGAACCA GGCTCGAGGG CGCGCCTTAA TTAAAAGCTT GCATGCCTGC AGGTCGACTC 60 TAGAGG 66

Claims (34)

1-21 (canceled)
22. Fusion protein OTP/CP4.
23-35 (cancelled)
35. An isolated DNA sequence comprising, in the direction of transcription, a functional fragment of the sequence of the maize H3C4 promoter and a functional fragment of the first intron of rice actin.
36. The DNA sequence according to claim 35 wherein said sequence of the maize H3C4 promoter is the AluI fragment of the maize H3C4 promoter.
37. The DNA sequence according to claim 35 wherein the functional fragment of the sequence of the maize H3C4 promoter comprises a sequence homologous to SEQ ID NO: 1.
38. The DNA sequence of claim 37 wherein said functional fragment of the first intron of rice actin comprises a sequence homologous to SEQ ID NO: 2.
39. The DNA sequence of claim 35 comprising a neutral DNA fragment between said functional fragment of the sequence of the maize H3C4 promoter and said functional fragment of the first intron of rice actin.
40. An isolated DNA sequence comprising a sequence homologous to SEQ ID NO: 3.
41. An expression cassette comprising a coding sequence and heterologous regulatory elements at the 5′ and 3′ positions relative to the coding sequence capable of functioning in monocotyledonous plant cells or monocotyledonous plants, wherein the 5′ regulatory element comprises the DNA sequence of claim 35.
42. The expression cassette of claim 41 wherein said coding sequence is a DNA sequence encoding a protein of interest.
43. The expression cassette of claim 41, wherein the DNA sequence encoding a protein of interest is a DNA sequence encoding a selectable marker.
44. The expression cassette of claim 41 wherein said protein of interest is selected from the group consisting of a DNA sequence encoding a protein that confers herbicide tolerance, a DNA sequence encoding a protein that confers insect tolerance, and a DNA sequence encoding a protein that confers disease tolerance.
45. The expression cassette of claim 44 wherein said wherein the DNA sequence encoding a protein that confers herbicide tolerance is selected from the group consisting of a DNA sequence encoding PAT conferring tolerance to bialophos, a DNA sequence encoding an EPSPS conferring resistance to herbicides having EPSPS as a target, a DNA sequence encoding glyphosate oxidoreductase, and a DNA sequence encoding an HPPD conferring tolerance to herbicides having HPPD as a target.
46. The expression cassette of claim 45 wherein the DNA sequence encoding a protein that confers herbicide tolerance is a DNA sequence encoding an EPSPS or a DNA sequence encoding an HPPD.
47. The expression cassette of claim 46 wherein the DNA sequence encoding a protein that confers herbicide tolerance is a DNA sequence encoding CP4 or a double-mutant EPSPS.
48. The expression cassette of claim 44 wherein said DNA sequence is preceded by a sequence encoding a transit peptide.
49. The expression cassette according to claim 48 wherein said transit peptide is the optimized transit peptide.
50. An expression cassette comprising, in the direction of transcription, a 5′ regulatory element of claim 1 functionally linked to a sequence encoding a fusion protein, functionally linked to a b 3′ l regulatory sequence, wherein said fusion protein comprises a transit peptide linked to a protein of interest.
51. The expression cassette of claim 50, wherein said protein of interest is a protein that confers herbicide tolerance selected from the group consisting of PAT, EPSPS, glyphosate oxidoreductase, and HPPD.
52. The expression cassette of claim 51, wherein the sequence encoding a fusion protein is a sequence encoding the fusion protein OTP/double-mutant EPSPS or a sequence encoding the fusion protein OTP/CP4.
53. An isolated DNA sequence encoding a fusion protein OTP/CP4.
54. An expression cassette comprising in the direction of transcription, a 5′ regulatory sequence functionally linked to a sequence encoding a fusion protein OTP/CP4, optionally linked to a 3′ regulatory sequence, wherein said expression cassette functions in plants or plant cells.
55. A cloning or expression vector for the transformation of a plant cell or of a plant, which comprises an expression cassette of claim 41 and at least one replication origin.
56. The vector of 55, wherein said vector is a plasmid.
57. A method of transforming plant cells, comprising integrating the expression vector of claim 41 into plant cells.
58. A plant cell which contains at least one expression cassette of claim 41.
59. A transformed plant which comprises a plant cell of claim 58.
60. A transformed plant which is regenerated from a plant cell of claim 58.
61. A transformed plant produced from the culture of a transformed plant of claim 59 or the crossing of a transformed plant of claim 59 with another plant.
62. A transformed seed of the transformed plant of claim 59.
63. A method of controlling weeds in a field comprising weeds and seeds or plants, said seeds or plants each comprising the expression cassette according to claim 41, which method comprises applying to the field a dose of herbicide which is toxic to the weeds but to which the seeds or plants are tolerant.
64. A method of cultivating plants transformed with the expression cassette of claim 41, which method comprises,
sowing seeds comprising said expression cassette in a field comprising weeds;
cultivating plants from the seeds;
applying to the field a dose of herbicide which is toxic to the weeds but to which the seeds or plants are tolerant prior to sowing the seeds or during cultivation of the seeds; and;
harvesting the cultivated plants when they reach maturity.
65. The method of claim 64 wherein said herbicide is applied before sowing the seeds, before emergence of the plants or after emergence of the plants.
US10/758,799 1997-12-24 2004-01-16 Maize H3C4 promoter combined with the first intron of rice actin, chimeric gene comprising it and transformed plant Abandoned US20040199944A1 (en)

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