US20030191104A1 - Glycosidase inhibitors and methods of synthesizing same - Google Patents
Glycosidase inhibitors and methods of synthesizing same Download PDFInfo
- Publication number
- US20030191104A1 US20030191104A1 US10/226,657 US22665702A US2003191104A1 US 20030191104 A1 US20030191104 A1 US 20030191104A1 US 22665702 A US22665702 A US 22665702A US 2003191104 A1 US2003191104 A1 US 2003191104A1
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- compound
- cyclic
- compounds
- cyclic sulfate
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- 238000000034 method Methods 0.000 title claims abstract description 23
- 239000003316 glycosidase inhibitor Substances 0.000 title abstract description 7
- 230000002194 synthesizing effect Effects 0.000 title abstract description 4
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- 125000004122 cyclic group Chemical group 0.000 claims abstract description 40
- 235000000346 sugar Nutrition 0.000 claims abstract description 19
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- 125000005842 heteroatom Chemical group 0.000 claims abstract description 9
- 229910052717 sulfur Inorganic materials 0.000 claims abstract description 9
- 150000003839 salts Chemical group 0.000 claims abstract description 8
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- OQEBIHBLFRADNM-UOWFLXDJSA-N (2r,3r,4r)-2-(hydroxymethyl)pyrrolidine-3,4-diol Chemical compound OC[C@H]1NC[C@@H](O)[C@@H]1O OQEBIHBLFRADNM-UOWFLXDJSA-N 0.000 description 5
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- OMKXVFDVAGCPBS-GTEYUELZSA-N [(2s,3s,4r,5r,6s)-1-[(2r,3s,4s)-3,4-dihydroxy-2-(hydroxymethyl)thiolan-1-ium-1-yl]-2,4,5,6,7-pentahydroxyheptan-3-yl] sulfate Chemical compound OC[C@H](O)[C@@H](O)[C@@H](O)[C@H](OS([O-])(=O)=O)[C@H](O)C[S+]1C[C@@H](O)[C@H](O)[C@H]1CO OMKXVFDVAGCPBS-GTEYUELZSA-N 0.000 description 5
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- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P35/00—Antineoplastic agents
- A61P35/04—Antineoplastic agents specific for metastasis
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P43/00—Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D207/00—Heterocyclic compounds containing five-membered rings not condensed with other rings, with one nitrogen atom as the only ring hetero atom
- C07D207/02—Heterocyclic compounds containing five-membered rings not condensed with other rings, with one nitrogen atom as the only ring hetero atom with only hydrogen or carbon atoms directly attached to the ring nitrogen atom
- C07D207/04—Heterocyclic compounds containing five-membered rings not condensed with other rings, with one nitrogen atom as the only ring hetero atom with only hydrogen or carbon atoms directly attached to the ring nitrogen atom having no double bonds between ring members or between ring members and non-ring members
- C07D207/10—Heterocyclic compounds containing five-membered rings not condensed with other rings, with one nitrogen atom as the only ring hetero atom with only hydrogen or carbon atoms directly attached to the ring nitrogen atom having no double bonds between ring members or between ring members and non-ring members with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to ring carbon atoms
- C07D207/12—Oxygen or sulfur atoms
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D345/00—Heterocyclic compounds containing rings having selenium or tellurium atoms as the only ring hetero atoms
Definitions
- This application relates to methods for synthesizing Salacinol, its stereoisomers, and analogues thereof potentially useful as glycosidase inhibitors.
- glucosidase inhibitors have been isolated from Salacia reticulate , a plant native to submontane forests in Sri Lanka and parts of India (known as “Kotala himbutu” in Singhalese).
- Salacia reticulate is a woody climbing plant which has been used in the Ayurvedic system of Indian medicine in the treatment of diabetes.
- Ayurvedic medicine advised that a person suffering from diabetes should drink water left overnight in a mug carved from Kotala himbutu wood.
- Yoshikawa et al. reported the isolation of the compound Salacinol from a water-soluble fraction derived from the dried roots and stems of Salacia reticulate . 1 Yoshikawa et al. determined the structure of Salacinol, shown below, and demonstrated its efficacy as an ⁇ -glucosidase inhibitor.
- Kotalanol contains a thiosugar sulfonium ion and an internal sulfate providing the counterion:
- Salacinol and Kotalanol may potentially have fewer long-term side effects than other existing oral antidiabetic agents.
- oral administration of acarbose in the treatment of Type II diabetes results in undesirable gastrointestinal side effects in some patients, most notably increased flatulence, diarrhoea and abdominal pain.
- Salacinol has been used as a therapy for diabetes in the Ayurvedic system of traditional medicine for many years with no notable side effects reported.
- recent animal studies have shown that the oral ingestion of an extractive from a Salacia reticulate trunk at a dose of 5,000 mg/kg had no serious acute toxicity or mutagenicity in rats. 3
- the Salacia reticulate plant is, however, in relatively small supply and is not readily available outside of Sri Lanka and India. Accordingly, it would be desirable if Salicinol, Kotalanol and analogues thereof could be produced synthetically.
- Carbohydrate processing inhibitors have also been shown to be effective in the treatment of some non-diabetic disorders, such as cancer. While normal cells display characteristic oligosaccharide structures, tumor cells display very complex structures that are usually found in embryonic tissues. It is believed that these complex structures provide signal stimuli for rapid proliferation and metastasis of tumor cells.
- a possible strategy for therapeutic use of glucosidase inhibitors is to take advantage of the differential rates of normal vs cancer cell growth to inhibit assembly of complex oligosaccharide structures.
- the indolizidine alkaloid swainsonine an inhibitor of Golgi ⁇ -mannosidase II, reportedly reduces tumor cell metastasis, enhances cellular immune responses, and reduces tumor cell growth in mice. 4 Swainsonine treatment has led to significant reduction of tumor mass in human patients with advanced malignancies, and is a promising drug therapy for patients suffering from breast, liver, lung and other malignancies. 5,6
- the compounds of the present invention may also find application in the treatment of Alzheimer's disease due to their stable, internal salt structure.
- Alzheimer's is characterized by plaque formation in the brain caused by aggregation of a peptide, ⁇ -amyloid, into fibrils. This is toxic to neuronal cells.
- X is selected from the group consisting of S, Se, and NH.
- Such compounds include stereoisomers of Salicinol.
- the target compounds have a stable, internal salt structure comprising heteroatom cation X and a sulfate anion; the substituents may vary without departing from the invention.
- R 1 , R 2 , R 3 , R 4 and R 5 are the same or different and are selected from the group consisting of H, OH, SH, NH 2 , halogens and constituents of compounds selected from the group consisting of cyclopropanes, epoxides, aziridines and episulfides; and R 6 is selected from the group consisting of H and optionally substituted straight chain, branched, or cyclic, saturated or unsaturated hydrocarbon radicals, such as alkyl, alkenyl, alkynyl, aryl, and alkoxy substituents containing any suitable functionality.
- Processes for the production of compounds of the general formula (I) comprising reacting a cyclic sulfate having the general formula (II) with a 5-membered ring sugar having the general formula (III)
- X is selected from the group consisting of S, Se, and NH
- R 1 and R 2 are selected from the group consisting of H and a protecting group
- R 3 is selected from the group consisting of H and optionally substituted straight chain, branched, or cyclic, saturated or unsaturated hydrocarbon radicals and their protected derivatives
- R 4 , R 5 and R 6 are the same or different and are selected from the group consisting of H, OH, SH, NH 2 , halogens and constituents of compounds selected from the group consisting of cyclopropanes, epoxides, aziridines and episulfides and their protected derivatives.
- the cyclic sulfate is a 2,4-di-O-protected-D-or L-erythritol-1,3-cyclic sulfate, such as 2,4-O-Benzylidene-D-or L-erythritol-1,3-cyclic sulfate (i.e. R 1 and R 2 comprise a benzylidene protecting group); R 3 is H or a protected polyhydroxylated alkyl chain; and R 4 , R 5 and R 6 are selected from the group consisting of OH and a protected OH group, such as OCH 2 C 6 H 5 .
- the synthetic processes comprise the step of opening the cyclic sulfate (II) by nucleophilic attack of the heteroatom X on the sugar (III).
- the cyclic sulfate (II) may be reacted with a 6-membered ring sugar having the general formula (XI) to yield a compound having the general formula (XII):
- R 1 , R 2 , R 3 , R 4 , R 5 and R 6 are the same or different and are selected from the group consisting of H, OH, SH, NH 2 , halogens and constituents of compounds selected from the group consisting of cyclopropanes, epoxides, aziridines and episulfides and R 7 is selected from the group consisting of H and optionally substituted straight chain, branched, or cyclic, saturated or unsaturated hydrocarbon radicals.
- R 1 , R 2 and R 3 are as described above in respect of compound (II) and R 4 , R 5 , R 6 and R 7 are selected from the group consisting of H, OH, SH, NH 2 , halogens and constituents of compounds selected from the group consisting of cyclopropanes, epoxides, aziridines and episulfides and their protected derivatives.
- the application also relates to pharmaceutical compositions comprising an effective amount of a compound according to formula (I) or (XII) together with a pharmaceutically acceptable carrier and to methods of treating carbohydrate metabolic disorders, such as non-insulin dependent diabetes, or different forms of cancer or Alzheimer's disease by administering to a subject in need of such treatment an effective amount of such compounds.
- carbohydrate metabolic disorders such as non-insulin dependent diabetes, or different forms of cancer or Alzheimer's disease
- Salacinol is a naturally occurring compound which may be extracted from the roots and stems of Salacia reticulate , a plant native to Sri Lanka and India. This application relates to synthetic routes for preparing Salacinol (1), and its nitrogen (2) and selenium (3) analogues shown below.
- This application also relates to synthetic routes for preparing the stereoisomers of compounds (1) to (3).
- Such analogues and stereoisomers (including stereoisomers of Salacinol) comprise a new class of compounds which are not naturally occurring and may find use as glycosidase inhibitors.
- Scheme 1(a) shows the general synthetic scheme developed by the inventors for arriving at the target compounds.
- the inventors followed a disconnection approach for determining the preferred synthetic route.
- a reasonable disconnection is one that gives the 5-membered-ring sugars (D) since they can be synthesized easily from readily available carbohydrate precursors.
- Nucleophilic substitution at C 1 of the sulfate fragment (E) can then yield the target molecules (Scheme 1(a)).
- a potential problem with this approach is that the leaving group (L) might act later as a base to abstract the acidic hydrogens of the sulfonium salt 7 and produce unwanted products. Therefore, the cyclic sulfate (F) may be used instead of (E) to obviate the problems associated with leaving group (L).
- Compound (G) may similarly be used as a cyclic sulfate reagent and is a protected version of (F).
- Scheme 1(b) below shows generally the coupling reactions for producing the target compounds (A)-(C).
- Route 1 of Scheme 1(b) shows the general strategy of reacting a cyclic sulfate with a 5-membered ring sugar to produce an intermediate compound, which may include benzyl or other protecting groups. As described in further detail below, the intermediate compound is then deprotected to yield the target compounds. The inventors have determined that Route 2 of Scheme 1(b), a possible side reaction, does not occur.
- Cyclic sulfates were prepared in analogous fashion to the ethylidene acetal. 8
- the cyclic sulfate (7) was synthesized in 4 steps starting from D-glucose (Scheme 2).
- 2,4-O-Benzylidene-D-erythrithol (5) was synthesized from D-glucose in two steps, 9,10 and then treated with thionyl chloride to yield the cyclic sulfite (6) which was oxidized to the cyclic sulfate (7) as described by Calvo-Flores et al. 8
- 1,4-anhydro-3-O-benzyl-4-thio-D-arabinitol (11) was synthesized in 9 steps starting from D-glucose (Scheme 4).
- 11 Benzylation of the compound (11), using benzyl bromide in DMF yielded 1,4-anhydro-2,3,5-tri-O-benzyl-4-thio-D-arabinitol (12) in 90% yield.
- Compound (11) was debenzylated to give 1,4-anhydro-4-thio-D-arabinitol (13) in 97% yield using a Birch reduction.
- 1,4-Di-O-methanesulfonyl-2,3,5-tri-O-benzyl-D-xylitol (15) is also a key intermediate for the synthesis of the aza and selena sugars (16) and (17).
- 1,4-Dideoxy-1,4-imino-L-arabinitol (16) 13 was synthesized in 7 steps starting from D-xylose (Scheme 5).
- the enantiomer (19) 13 was synthesized in an analogous way starting from L-xylose (Scheme 6).
- Compound (19) was also synthesized in 10 steps starting from D-xylose.
- Scheme 6(a) below shows a more generalized scheme for synthesizing compound (20) using other possible protecting groups (R ⁇ COR, CH 2 C 6 H 4 —OMe p ).
- the target compounds (1)-(3) were prepared by opening of the cyclic sulfates by nucleophilic attack of the heteroatoms on the 5-membered rings (Scheme 1(b) above).
- the heteroatom gives rise to a positively charged cation and the cyclic sulfate gives rise to a negatively charged counterion.
- This internal salt structure may explain the stability of the target compounds toward decomposition by further nucleophilic attack.
- the seleno-analogue intermediate (27) (R ⁇ CH 2 C 6 H 5 ) was made starting from the seleno-arabinitol (20) (R ⁇ CH 2 C 6 H 5 ) and the cyclic sulfate (10) in excellent yield 86% (Scheme 11), but NMR spectroscopy showed the presence of two isomers in a ratio of 7:1 that differed in stereochemistry at the stereogenic selenium center.
- the isomers were separable by analytical HPLC.
- the inventors have assigned the name “Blintol” to the new selenium analogue (3).
- the seleno-analogue intermediate (28) (R ⁇ CH 2 C 6 H 5 ) was made starting from the seleno-arabinitol (20) (R ⁇ CH 2 C 6 H 5 ) and the cyclic sulfate (7) in excellent yield 97% (Scheme 12); a mixture of two isomers in a ratio of 3:1 that differed in stereochemistry at the stereogenic selenium center was obtained.
- the isomers were separable by analytical HPLC.
- Compound (29) is a diastereomer of Blintol (3).
- the nitrogen analogue intermediate (30) was made by the reaction of the deprotected imino-arabinitol (19) with the cyclic sulfate (10) in a good yield 72% (Scheme 13).
- Compound (19) was not soluble in acetone so the reaction was performed in dry methanol.
- the inventors have assigned the name “Ghavamiol” to the new nitrogen analogue (2).
- Compound (30) was deprotected to give Ghavamiol (2) in 64% yield.
- the enantiomer intermediate (31) was made by the reaction of the deprotected imino-arabinitol (16) with the cyclic sulfate (7) in a good yield 72% (Scheme 14). A side product (21%) which was identified to be the product of methanolysis of the cyclic sulfate was obtained. Compound (31) was deprotected to give compound (32) in 77% yield. Compound (32) is the enantiomer of Ghavamiol (2).
- target compounds having potential application as glycosidase inhibitors may be synthesized in the manner described above using 6-membered rather than 5-membered ring heterocycles as reagents.
- the cyclic sulfate (described above) is opened in the coupling reaction due to nucleophilic attack of the heteroatoms (i.e. X ⁇ S, Se, N) on the ring sugars.
- the general formulas for the 6-membered sugar reagent and resulting target compound are as shown below.
- the 6-membered ring target compound shares the same internal salt structure as the 5-membered ring embodiment.
- the substituent groups may vary as described above without departing from the invention.
- Step 1 2,4-O-Benzylidene-D-erythritol (5).
- Compound (5) was prepared from 4,6-O-benzylidene-D-glucose (4) according to standard procedures. 9,10 Compound (5) has been mentioned by MacDonald et al., 10 without characterization, which is therefore dealt with here.
- Step 3 2,4-O-Benzylidene-D-erythritol-1,3-cyclic Sulfate (7).
- the product was purified by flash chromatography [hex:EtOAc, 4:1+0.1% Et 3 N] to yield a white solid (3.5 g, 95%). A portion of the product was recrystallized from EtOAc:hex. Mp 115-125° C.
- the product was partitioned between CH 2 Cl 2 (150 mL) and water (50 mL), and the organic solution was washed with water (50 mL) and brine (50 mL) and dried (MgSO 4 ).
- the product was purified by flash chromatography (hex:EtOAc, 3:1) to give a yellow oil (4.74 g, 80%).
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Abstract
A method for synthesizing Salacinol, its stereoisomers, and non-naturally occurring selenium and nitrogen analogues thereof having the general formula (I):
The compounds are potentially useful as glycosidase inhibitors. The synthetic schemes comprise reacting a cyclic sulfate with a 5-membered ring sugar containing a heteroatom (X). The heteroatom preferably comprises sulfur, selenium, or nitrogen. The cyclic sulfate and ring sugar reagents may be readily prepared from carbohydrate precursors, such as D-glucose, L-glucose, D-xylose and L-xylose. The target compounds are prepared by opening of the cyclic sulfates by nucleophilic attack of the heteroatoms on the 5-membered ring sugars. The resulting heterocyclic compounds have a stable, inner salt structure comprising a heteroatom cation and a sulfate anion. The synthetic schemes yield various stereoisomers of the target compounds in moderate to good yields with limited side-reactions. In an alternative embodiment of the invention, the cyclic sulfate may be similarly reacted with a 6-membered ring sugar containing a heteroatom (X) to yield a compound having the general formula (XII):
Description
- This application is a continuation of application Ser. No. 09/627,434 filed 28 Jul. 2000, which is currently pending.
- This application relates to methods for synthesizing Salacinol, its stereoisomers, and analogues thereof potentially useful as glycosidase inhibitors.
- In treatment of non-insulin dependent diabetes (NIDD) management of blood glucose levels is critical. One strategy for treating NIDD is to delay digestion of ingested carbohydrates, thereby lowering post-prandial blood glucose concentration. This can be achieved by administering drugs which inhibit the activity of enzymes, such as glucosidases, which mediate the hydrolysis of complex starches to oligosaccharides in the small intestine. For example, carbohydrate analogues, such as acarbose, reversibly inhibit the function of pancreatic α-amylase and membrane-bound intestinal α-glucoside hydrolase enzymes. In patients suffering from Type II diabetes, such enzyme inhibition results in delayed glucose absorption into the blood and a smoothing or lowering of postprandial hyperglycemia, resulting in improved glycemic control.
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- Kotalanol has been found to show more potent inhibitory activity against sucrase than Salicinol and acarbose.2
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- It is believed that the mechanism of action of some known inhibitors may be at least partially explained by the establishment of stabilizing electrostatic interactions between the inhibitor and the enzyme active site carboxylate residues. It is postulated that the compounds of the present invention, which comprise postively charged sulfonium, ammonium, and selenonium ions, could function in a similar manner. It is also possible that Salacinol and other compounds of the same class may act by alteration of a transport mechanism across the intestinal wall rather than by directly binding to glucosidase enzymes.
- Salacinol and Kotalanol may potentially have fewer long-term side effects than other existing oral antidiabetic agents. For example, oral administration of acarbose in the treatment of Type II diabetes results in undesirable gastrointestinal side effects in some patients, most notably increased flatulence, diarrhoea and abdominal pain. As mentioned above, Salacinol has been used as a therapy for diabetes in the Ayurvedic system of traditional medicine for many years with no notable side effects reported. Further, recent animal studies have shown that the oral ingestion of an extractive from aSalacia reticulate trunk at a dose of 5,000 mg/kg had no serious acute toxicity or mutagenicity in rats.3
- TheSalacia reticulate plant is, however, in relatively small supply and is not readily available outside of Sri Lanka and India. Accordingly, it would be desirable if Salicinol, Kotalanol and analogues thereof could be produced synthetically.
- Carbohydrate processing inhibitors have also been shown to be effective in the treatment of some non-diabetic disorders, such as cancer. While normal cells display characteristic oligosaccharide structures, tumor cells display very complex structures that are usually found in embryonic tissues. It is believed that these complex structures provide signal stimuli for rapid proliferation and metastasis of tumor cells. A possible strategy for therapeutic use of glucosidase inhibitors is to take advantage of the differential rates of normal vs cancer cell growth to inhibit assembly of complex oligosaccharide structures. For example, the indolizidine alkaloid swainsonine, an inhibitor of Golgi α-mannosidase II, reportedly reduces tumor cell metastasis, enhances cellular immune responses, and reduces tumor cell growth in mice.4 Swainsonine treatment has led to significant reduction of tumor mass in human patients with advanced malignancies, and is a promising drug therapy for patients suffering from breast, liver, lung and other malignancies.5,6
- The compounds of the present invention may also find application in the treatment of Alzheimer's disease due to their stable, internal salt structure. Alzheimer's is characterized by plaque formation in the brain caused by aggregation of a peptide, β-amyloid, into fibrils. This is toxic to neuronal cells. One can inhibit this aggregation by using detergent-like molecules. It is believed that the compounds of the present invention, which are amphipathic, may demonstrate this activity.
- The need has therefore arisen for a new class of glycosidase inhibitors which may be synthesized in high yields from readily available starting materials and which have potential use as therapeutics.
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- where X is selected from the group consisting of S, Se, and NH. Such compounds include stereoisomers of Salicinol. The target compounds have a stable, internal salt structure comprising heteroatom cation X and a sulfate anion; the substituents may vary without departing from the invention. Preferably, R1, R2, R3, R4 and R5 are the same or different and are selected from the group consisting of H, OH, SH, NH2, halogens and constituents of compounds selected from the group consisting of cyclopropanes, epoxides, aziridines and episulfides; and R6 is selected from the group consisting of H and optionally substituted straight chain, branched, or cyclic, saturated or unsaturated hydrocarbon radicals, such as alkyl, alkenyl, alkynyl, aryl, and alkoxy substituents containing any suitable functionality.
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- where X is selected from the group consisting of S, Se, and NH; R1 and R2 are selected from the group consisting of H and a protecting group; R3 is selected from the group consisting of H and optionally substituted straight chain, branched, or cyclic, saturated or unsaturated hydrocarbon radicals and their protected derivatives; and R4, R5 and R6 are the same or different and are selected from the group consisting of H, OH, SH, NH2, halogens and constituents of compounds selected from the group consisting of cyclopropanes, epoxides, aziridines and episulfides and their protected derivatives. Preferably the cyclic sulfate is a 2,4-di-O-protected-D-or L-erythritol-1,3-cyclic sulfate, such as 2,4-O-Benzylidene-D-or L-erythritol-1,3-cyclic sulfate (i.e. R1 and R2 comprise a benzylidene protecting group); R3 is H or a protected polyhydroxylated alkyl chain; and R4, R5 and R6 are selected from the group consisting of OH and a protected OH group, such as OCH2C6H5. The synthetic processes comprise the step of opening the cyclic sulfate (II) by nucleophilic attack of the heteroatom X on the sugar (III).
-
- where X is selected from the group consisting of S, Se and NH. In this embodiment R1, R2, R3, R4, R5 and R6 are the same or different and are selected from the group consisting of H, OH, SH, NH2, halogens and constituents of compounds selected from the group consisting of cyclopropanes, epoxides, aziridines and episulfides and R7 is selected from the group consisting of H and optionally substituted straight chain, branched, or cyclic, saturated or unsaturated hydrocarbon radicals. Preferably R1, R2 and R3 are as described above in respect of compound (II) and R4, R5, R6 and R7 are selected from the group consisting of H, OH, SH, NH2, halogens and constituents of compounds selected from the group consisting of cyclopropanes, epoxides, aziridines and episulfides and their protected derivatives.
- The application also relates to pharmaceutical compositions comprising an effective amount of a compound according to formula (I) or (XII) together with a pharmaceutically acceptable carrier and to methods of treating carbohydrate metabolic disorders, such as non-insulin dependent diabetes, or different forms of cancer or Alzheimer's disease by administering to a subject in need of such treatment an effective amount of such compounds.
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- This application also relates to synthetic routes for preparing the stereoisomers of compounds (1) to (3). Such analogues and stereoisomers (including stereoisomers of Salacinol) comprise a new class of compounds which are not naturally occurring and may find use as glycosidase inhibitors.
- 1.0 Summary of General Synthetic Scheme
- Scheme 1(a) below, shows the general synthetic scheme developed by the inventors for arriving at the target compounds. To synthesize different stereoisomers of Salacinol and its nitrogen and selenium analogues (A)-(C), 5-membered-ring sugars are reacted with sulfate-containing compounds in accordance with the invention (in Scheme 1(a) the letters (A), (B), and (C) represent all stereoisomers of Salacinol and its nitrogen and selenium analogues (1), (2) and (3) respectively). The inventors followed a disconnection approach for determining the preferred synthetic route. A reasonable disconnection is one that gives the 5-membered-ring sugars (D) since they can be synthesized easily from readily available carbohydrate precursors. Nucleophilic substitution at C1 of the sulfate fragment (E) can then yield the target molecules (Scheme 1(a)). A potential problem with this approach is that the leaving group (L) might act later as a base to abstract the acidic hydrogens of the sulfonium salt7 and produce unwanted products. Therefore, the cyclic sulfate (F) may be used instead of (E) to obviate the problems associated with leaving group (L). Compound (G) may similarly be used as a cyclic sulfate reagent and is a protected version of (F).
- Scheme 1(a). Disconnection approach for the synthesis of (A)-(C) (R═H, —CH2C6H5 and L=leaving group).
-
- Route 1 of Scheme 1(b) shows the general strategy of reacting a cyclic sulfate with a 5-membered ring sugar to produce an intermediate compound, which may include benzyl or other protecting groups. As described in further detail below, the intermediate compound is then deprotected to yield the target compounds. The inventors have determined that Route 2 of Scheme 1(b), a possible side reaction, does not occur.
- 2.0 Synthesis of Reagents
- Cyclic sulfates and 5-membered-ring sugars were prepared in accordance with the synthetic schemes described below. As will be apparent to a person skilled in the art, other equivalent schemes for producing the reagents of the invention could be substituted.
- 2.1 Cyclic sulfates
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-
- 2.2 Synthesis of 5-Membered-ring Heterocycles
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-
-
-
- 3.0 Synthesis of the Target Compounds
- The target compounds (1)-(3) were prepared by opening of the cyclic sulfates by nucleophilic attack of the heteroatoms on the 5-membered rings (Scheme 1(b) above). The heteroatom gives rise to a positively charged cation and the cyclic sulfate gives rise to a negatively charged counterion. This internal salt structure may explain the stability of the target compounds toward decomposition by further nucleophilic attack.
- 3.1 Synthesis of Salacinol
-
-
-
- To reduce the number of synthetic steps, the inventors attempted the coupling reactions with the deprotected thio-arabinitols. Thus, the partially deprotected compound (11) was reacted with the cyclic sulfate (10) in acetone, to give compound (26) in 32% yield. Deprotection yielded Salacinol (1) in 36% yield (Scheme 10).
- The fully-deprotected thio-arabinitol (13) was not soluble in acetone and the reaction in methanol produced several products.
- 3.2 Synthesis of Selenium Analogues
-
-
- Compound (29) is a diastereomer of Blintol (3).
- 3.3 Synthesis of Nitrogen Analogues
- The nitrogen analogue intermediate (30) was made by the reaction of the deprotected imino-arabinitol (19) with the cyclic sulfate (10) in a good yield 72% (Scheme 13). Compound (19) was not soluble in acetone so the reaction was performed in dry methanol. A side product (19%) which was identified to be the product of methanolysis of the cyclic sulfate was obtained. The inventors have assigned the name “Ghavamiol” to the new nitrogen analogue (2). Compound (30) was deprotected to give Ghavamiol (2) in 64% yield.
- The enantiomer intermediate (31) was made by the reaction of the deprotected imino-arabinitol (16) with the cyclic sulfate (7) in a good yield 72% (Scheme 14). A side product (21%) which was identified to be the product of methanolysis of the cyclic sulfate was obtained. Compound (31) was deprotected to give compound (32) in 77% yield. Compound (32) is the enantiomer of Ghavamiol (2).
- 4.0 Alternative Synthetic Scheme
- In an alternative embodiment of the invention, target compounds having potential application as glycosidase inhibitors may be synthesized in the manner described above using 6-membered rather than 5-membered ring heterocycles as reagents. As in the embodiments described above, the cyclic sulfate (described above) is opened in the coupling reaction due to nucleophilic attack of the heteroatoms (i.e. X═S, Se, N) on the ring sugars. As will be apparent to a person skilled in the art, the general formulas for the 6-membered sugar reagent and resulting target compound are as shown below.
- The 6-membered ring target compound shares the same internal salt structure as the 5-membered ring embodiment. The substituent groups may vary as described above without departing from the invention.
- The following examples will further illustrate the invention in greater detail although it will be appreciated that the invention is not limited to the specific examples.
- 5.1 Experimental Methods
- Optical rotations were measured at 20° C.1H and 13C NMR spectra were recorded at 400.13 and 100.6 MHz for proton and carbon respectively. All assignments were confirmed with the aid of two-dimensional 1H,1H (COSYDFTP) or 1H,13C (INVBTP) experiments using standard Bruker pulse programs. MALDI-TOF mass spectra were obtained for samples dispersed in a 2,5-dihydroxybenzoic acid matrix using a Perseptive Biosystems Voyager-DE instrument. Silica gel for chromatography was Merck kieselgel 60. High resolution mass spectra were LSIMS (Fab), run on a Kratos Concept H double focussing mass spectrometer at 10000 RP.
- 5.2 Preparation of Intermediates
- Step 1—2,4-O-Benzylidene-D-erythritol (5).
- Compound (5) was prepared from 4,6-O-benzylidene-D-glucose (4) according to standard procedures.9,10 Compound (5) has been mentioned by MacDonald et al.,10 without characterization, which is therefore dealt with here. Mp 138-139° C.; [α]D −44° (c 1.0, MeOH); 1H NMR (CD3OD): δ7.53-7.28 (5H, m, Ar), 5.53 (1H, s, H-5), 4.2 (1H, dd, J=10.1, 3.6 Hz, H-4a), 3.92 (1H, dd, J=12.1, 1.7 Hz, H-1a), 3.74 (1H, dd, J=12.1, 5.7 Hz, H-1b), 3.67-3.55 (3H, m, H-3, H-2, H-4b); 13C NMR (100.6 MHz, CD3OD): δ139:52 (Cipso), 129.77 (Cpara), 128.99, 127.49 (4Cortho+meta), 102.36 (C-5), 84.22 (C-3), 72.21 (C-4), 62.76 (C-1), 62.59 (C-2); MALDI-TOF MS: m/e 211 (M++H), 233 (M++Na). Anal. Calcd for C11H14O4: C, 62.83; H, 6.72. Found: C, 62.96; H, 6.55.
- Step 2—2,4-O-Benzylidene-D-erythritol-1,3-cyclic Sulfite (6).
- A solution of the diol (5) (4.5 g, 21 mmol) and Et3N (11 mL, 4 equiv) in dry CH2Cl2 (90 mL) was added dropwise to a solution of SOCl2 (2.4 mL, 1.5 equiv) in dry CH2Cl2 (60 mL), with stirring in an ice-bath under an N2 atmosphere. Stirring was continued at 0° C., until TLC (hex:EtOAc, 4:1) showed complete disappearance of the starting material. The mixture was diluted with CH2Cl2 (150 mL) and washed with H2O (150 mL) and brine (150 mL). The organic solution was dried (Na2SO4) and concentrated on a rotary evaporator. The product was purified by flash chromatography [hex:EtOAc, 4:1+0.1% Et3N] to give a mixture of two diastereomers (4.5 g, 82%). One of the isomers was selectively recrystallized from EtOAc:hex. Mp 137-139° C.; [α]D +32° (c 1.0, CH2Cl2); 1H NMR (CD2Cl2): δ7.48-7.36 (5H, m, Ar), 5.68 (1H, s, H-5), 5.04 (1H, ddd, J=10.4, 9.5, 5.0 Hz, H-3), 4.80 (1H, dd, J=10.4, 10.4 Hz, H-1a), 4.24 (1H, dd, J=10.5,5.0 Hz, H-4e), 4.18 (1H, ddd, J=10.4, 9.5, 4.8 Hz, H-2), 4.06 (1H, dd, J=10.4, 4.8 Hz, H-1e), 3.89 (1H, dd, J=10.5,10.4 Hz, H-4a); 13C NMR (100.6 MHz, CD2Cl2): δ137.14 (Cipso), 129.74 (Cpara), 128.65, 126.50 (4Cortho+meta), 102.72 (C-5), 73.56 (C-2), 68.16 (C-4), 63.90 (C-3), 60.18 (C-1). Anal. Calcd for C11H12O5S: C, 51.55; H, 4.72. Found: C, 51.80; H, 4.66.
- Step 3—2,4-O-Benzylidene-D-erythritol-1,3-cyclic Sulfate (7).
- The cyclic sulfite (6) (3.5 g, 14 mmol) was dissolved in a mixture of MeCN (50 mL) and CCl4 (50 mL), and NaIO4 (4.1 g, 1.5 equiv) and RuCl3.H2O (50 mg) were added followed by H2O (50 mL). The mixture was stirred vigorously at rt until TLC (hex:EtOAc,4:1) showed complete disappearance of the starting material. The mixture was diluted with Et2O (200 mL) and washed with H2O (200 mL) and brine (200 mL). The organic solution was dried (Na2SO4) and concentrated on a rotary evaporator. The product was purified by flash chromatography [hex:EtOAc, 4:1+0.1% Et3N] to yield a white solid (3.5 g, 95%). A portion of the product was recrystallized from EtOAc:hex. Mp 115-125° C. (dec); [α]D +4° (c 1.0, CHCl3); 1H NMR (CD2Cl2): δ7.48-7.37 (5H, m, Ar), 5.65 (1H, s, H-5), 4.86 (1H, ddd, J=10.2, 9.8, 5.0 Hz, H-3), 4.76 (1H, dd, J=10.7, 10.5 Hz, H-1a), 4.65 (1H, dd, J=10.5,5.0 Hz, H-1e), 4.44 (1H, dd, J=10.5, 5.0 Hz, H-4e), 4.25 (1H, ddd, J=10.7, 9.8, 5.0 Hz, H-2), 3.97 (1H, dd, J=10.5,10.2 Hz, H-4a); 13C NMR (100.6 MHz, CD2Cl2): δ136.32 (Cipso), 130.03 (Cpara), 128.74, 126.52 (4Cortho+meta), 102.98 (C-5), 75.74 (C-3), 73.19 (C-1), 71.68 (C-2), 67.64 (C-4); MALDI-TOF MS: m/e 273 (M++H), Anal. Calcd for C11H12O6S: C, 48.52; H, 4.45. Found: C, 48.43; H, 4.39.
- 1,4-Anhydro-2,3,5-tri-O-benzyl-4-thio-D-arabinitol(12).
- A mixture of 1,4-anhydro-3-O-benzyl-4-thio-D-arabinitol (1.0 g, 4.2 mmol) and 60% NaH (0.85 g, 5 equiv) in DMF (20 mL) was stirred in an ice-bath for 1 h. A solution of benzyl bromide (1.9 mL, 3.8 equiv) in DMF (5 mL) was added and the solution was stirred at rt for 3 h. The mixture was added to ice-water (150 mL) and extracted with Et2O (150 mL). The organic solution was dried (Na2SO4) and concentrated. The product was purified by flash chromatography [hex:EtOAc, 4:1] to give a syrup (1.6 g, 90%). [α]D +5° (c 1.6, CHCl3); 1H NMR (CDCl3): δ7.38-7.23 (15H, m, Ar), 4.64-4.45 (6H, m, CH2Ph), 4.19 (1H, dd, J=8.9, 4.6 Hz, H-2), 4.11 (1H, dd, J=7.2, 3.8 Hz, H-3), 3.69 (1H, dd, J=8.8, 7.6 Hz, H-5a), 3.57 (1H, ddd, J=7.5, 6.4, 3.6 Hz, H-4), 3.50 (1H, dd, J=8.9, 6.3 Hz, H-5b), 3.08 (1H, dd, J=11.4, 5.1 Hz, H-1a), 2.91 (1H, dd, J=11.4, 4.6 Hz, H-1b). 13C NMR (100.6 MHz, CDCl3): δ138.16, 138.06, 137.88 (3Cipso), 128.40-127.59 (15CAr), 85.08 (C-3), 85.04 (C-2), 73.01 (CH2Ph), 72.34 (C-5), 71.85,71.50(2CH2Ph), 48.99 (C-4), 33.10 (C-1). Anal. Calcd for C26H28O3S: C, 74.25; H, 6.72. Found: C, 74.18; H, 6.53.
- 1,4-Anhydro-2,3,5-tri-O-benzyl-4-seleno-D-arabinitol (20).
- Selenium metal (1.1 g, 14 mmol) was added to liquid NH3 (60 mL) in a −50° C. bath and small pieces of Na (0.71 g) were added until a blue color appeared. A small portion of selenium (20 mg) was added to remove the blue color. NH3 was removed by warming on a water bath and DMF was added and removed under high vacuum to remove the rest of NH3. A solution of the mesylated compound (18) (7.4 g, 12.7 mmol) in DMF (100 mL) was added and the mixture was stirred under N2 in a 70° C. bath for 3 h. The mixture was cooled and the solvent was removed on high vacuum. The product was partitioned between CH2Cl2 (150 mL) and water (50 mL), and the organic solution was washed with water (50 mL) and brine (50 mL) and dried (MgSO4). The product was purified by flash chromatography (hex:EtOAc, 3:1) to give a yellow oil (4.74 g, 80%). [α]D +220° (c 1.3, CHCl3); 1H NMR (CDCl3): δ7.22-7.48 (15H, m, Ar), 4.67, 4.61 (2H, 2d, J=11.8 Hz, CH2Ph), 4.56, 4.48 (2H, 2d, J=12.1 Hz,CH2Ph), 4.53, 4.50 (2H, 2d, CH2Ph), 4.22 (1H, dd, J=10.1, 5.1 Hz, H-2), 4.07 (1H, dd, J=4.6, 4.6 Hz, H-3), 3.85 (1H, dd, J=9.2, 7.6 Hz, H-5a), 3.77 (1H, ddd, J=7.5, 6.9, 4.5 Hz, H-4), 3.53 (1H, dd, J=9.1, 6.8 Hz, H-5b), 3.11 (1H, dd, J=10.4, 5.1 Hz, H-1a), 2.96 (1H, dd, J=10.4, 5.3 Hz, H-1b). 13C NMR (100.6 MHz, CDCl3): δ138.24, 138.21, 138.06 (3Cipso), 128.40-127.60 (15CAr), 85.93 (C-2), 85.63 (C-3), 72.96 (C-5, CH2Ph), 72.14,71.50(2CH2Ph), 42.59 (C-4), 23.96 (C-1). Anal. Calcd for C26H28O3Se: C, 66.65; H, 6.03. Found: C, 66.49; H, 6.05.
- The thio, aza or selenosugar (3 mmol) and the cyclic sulfate (1.2 equiv) were dissolved in dry acetone (in the case of (21), (22), (24), (26), (27) and (28)) or dry methanol (in the case of (30) and (31)) (0.5 mL) and anhydrous K2CO3 (7 mg) was added. The mixture was stirred in a Caries tube in an oil-bath (75° C.) overnight. The solvent was removed under reduced pressure and the product was purified by column chromatography.
- 1-((1′,4′-Anhydro-2′,3′,5′-tri-O-benzyl-4′-thio-D-arabinitol)-4′-S-yl)-2,4-O-benzylidene-1-deoxy-L-erythritol-3-sulfate (21).
- Column chromatography [CHCl3:MeOH, 10:1+0.1% Et3N] of the crude product gave an amorphous solid (33%). [α]D −11.9° (c 1.7, CH2Cl2); 1H NMR (CD2Cl2): δ7.49-7.12 (20H, m, Ar), 5.54 (1H, s, H-5), 4.59 (1H, ddd, J=9.9, 5.4, 4.5 Hz, H-3), 4.55-4.33 (8H, m, 4CH2Ph, H-2′, H-4a, H-1a, H-3′), 4.29 (1H, dt, J=9.5, 3.0 Hz, H-2), 4.25 and 4.15 (2H, 2d, J=11.9 Hz, CH2Ph), 4.04 (1H, m, H-1′a) 4.02-3.95 (2H, m, H-4′, H-1b), 3.78 (1H, dd, J=10.7, 10.7 Hz, H-4b), 3.74 (1H, dd, J=13.6, 3.8 Hz, H-1′b), 3.62 (1H, dd, J=9.9, 8.6 Hz, H-5′a), 3.54 (1H, dd, J=9.9, 7.2 Hz, H-5′b); 13C NMR (100.6 MHz, CD2Cl2): δ137.34, 137.24, 136.56, 136.39 (4Cipso), 129.73-126.62 (20CAr), 101.95 (C-5), 83.75 (C-3′), 82.82 (C-2′), 76.80 (C-2), 73.73, 72.84, 72.52 (3CH2Ph), 69.54.(C-4), 67.01 (C-5′), 66.48 (C-3), 65.27 (C-4′), 49.67 (C-1), 48.28 (C-1′); MALDI-TOF MS: m/e 693 (M++H). Anal. Calcd for C37H40O9S2: C, 64.14; H, 5.82. Found: C, 63.88; H, 5.83.
- 1,4-(1′,4′-Anhydro-2′,3′,5′-tri-O-benzyl-4′-thio-D-arabinitol)-4′-S-yl)-2,4-O-benzylidene-1-deoxy-D-erythritol-3-sulfate (22).
- Column chromatography [CHCl3:MeOH, 10:1+0.1% Et3N] of the crude product gave an amorphous solid (79%). [α]D −46.9° (c 0.65, CH2Cl2); 1H NMR (CD2Cl2): δ7.43-7.10 (20H, m, Ar), 5.49 (1H, s, H-5), 4.62-4.34 (11H, m, CH2Ph, H-3, H-4a, H-2′, H-1a, H-3′), 4.30-4.21 (2H, m, H-2, H-4′), 3.96 (1H, dd, J=9.7, 6.2 Hz, H-5′a), 3.90 (1H, dd, J=13.3, 3.4 Hz, H-1b), 3.82 (1H, dd, J=9.8, 9.8 Hz, H-5′b), 3.79-3.71 (2H, m, H-1′a, H-4b), 3.51 (1H, dd, J=13.2, 3.9 Hz, H-1′b); 13C NMR (100.6 MHz, CD2Cl2): δ137.62, 137.27, 136.48, 136.29 (4Cipso), 129.80-126.56 (20CAr), 102.16 (C-5), 84.25 (C-3′), 82.56 (C-2′), 77.07 (C-2), 74.02, 72.74 (3CH2Ph), 69.75 (C-4), 67.19 (C-5′), 66.82 (C-3), 65.76 (C-4′), 50.41 (C-1), 49.60 (C-1′); MALDI-TOF MS: m/e 693 (M++H). Anal. Calcd for C37H40O9S2: C, 64.14; H, 5.82. Found: C, 64.16; H, 5.73.
- 1-((1′,4′-Anhydro-2′,3′,5′-tri-O-benzyl-4′-thio-L-arabinitol)-4′-S-yl)-2,4-O-benzylidene-1-deoxy-D-erythritol-3-sulfate (24).
- Column chromatography [CHCl3:MeOH, 10:1+0.1% Et3N] of the crude product gave an amorphous solid (40%). [α]D +14.3° (c 1.4, CH2Cl2); 1H NMR (CD2Cl2): δ7.49-7.12 (20H, m, Ar), 5.55 (1H, s, H-5), 4.60 (1H, ddd, J=9.8, 5.5, 4.5 Hz, H-3), 4.55-4.44 (5H, m, 3CH2Ph, H-2′, H-4a), 4.42 (1H, dd, J=13.3, 2.3 Hz, H-1a), 4.39-4.34 (2H, m, CH2Ph, H-3′), 4.28 (1H, dt, J=9.8, 2.9 Hz, H-2), 4.24 and 4.14 (2H, 2d, J=11.9 Hz, CH2Ph), 4.10 (1H, d, J=13.4 Hz H-1′a), 3.98-3.90 (2H, m, H-4′, H-1b), 3.78 (1H, dd, J=10.5, 10.5 Hz, H-4b), 3.67 (1H, dd, J=13.4, 3.8 Hz, H-1′b), 3.62 (1H, dd, J=9.9, 8.7 Hz, H-5′a), 3.53 (1H, dd, J=9.9, 7.2 Hz, H-5′b); 13C NMR (100.6 MHz, CD2Cl2): δ137.32, 137.26, 136.48, 136.25 (4Cipso), 129.79-126.64 (20CAr), 102.06 (C-5), 83.96 (C-3′), 82.74 (C-2′), 76.93 (C-2), 73.81, 72.97, 72.57 (3CH2Ph), 69.59 (C-4), 67.07 (C-5′), 66.36 (C-3), 66.31 (C-4′), 49.96 (C-1), 48.52 (C-1′). Anal. Calcd for C37H40O9S2: C, 64.14; H, 5.82. Found: C, 64.13; H, 5.74.
- 1-((1′,4′-Anhydro-3′-O-benzyl-4′-thio-D-arabinitol)-4′-S-yl)-2,4-O-benzylidene-1-deoxy-L-erythritol-3-sulfate (26).
- Column chromatography [CHCl3:MeOH, 10:1+0.1% Et3N] of the crude product gave an amorphous solid (32%).; 1H NMR (CD2Cl2): δ7.49-7.26 (10H, m, Ar), 6.22 (1H, d, J=4.4 Hz, 2′-OH), 5.54 (1H, s, H-5), 4.96 (1H, br-s, H-2′), 4.64 (1H, d, J=11.6 Hz, CH2Ph), 4.64-4.62 (1H, m, 5′-OH), 4.56 (1H, d, J=11.6 Hz, CH2Ph), 4.54-4.48 (1H, m, H-3), 4.46 (1H, dd, J=10.5, 5.4 Hz, H-4a), 4.33-4.25 (3H, m, H-3′, H-2, H-1′a), 4.12 (1H, dd, J=13.5, 2.6 Hz, H-1a), 4.12-4.09 (1H, m, H-4′), 4.01 (1H, dd, J=13.5, 3.4 Hz, H-1b), 3.92-3.82 (2H, m, H-5′a, H-5′b), 3.78 (1H, dd, J=10.5, 10.1 Hz, H-4b), 3.67 (1H, dd, J=13.5, 3.9 Hz, H-1′b); 13C NMR (100.6 MHz, CD2Cl2): δ136.92, 136.73 (2Cipso), 129.97-126.61 (10CAr), 102.32 (C-5), 88.45 (C-3′), 76.61 (C-2), 76.22 (C-2′), 72.96 (CH2Ph), 71.24 (C-4′), 69.27 (C-4), 66.96 (C-3), 60.51 (C-5′), 52.43 (C-1′), 48.30 (C-1); MALDI-TOF MS: m/e 513 (M++H). Anal. Calcd for C23H28O9S2: C, 53.89; H, 5.51. Found: C, 53.64; H, 5.34.
- 1-((1′,4′-Anhydro-2′,3′,5′-tri-O-benzyl-4′-seleno-D-arabinitol)-4′-Se-yl)-2,4-O-benzylidene-1-deoxy-L-erythritol-3-sulfate (27).
- Column chromatography [CHCl3:MeOH, 15:1] of the crude product gave an amorphous solid (86%). NMR showed the presence of two isomers (7:1) at the stereogenic selenium center which were separated on analytical HPLC [acetonitrile/H2O]. Anal. Calcd for C37H40O9SSe: C, 59.99; H, 5.45. Found: C, 59.91; H, 5.44.
- 1-((1′,4′-Anhydro-2′,3′,5′-tri-O-benzyl-4′-seleno-D-arabinitol)-4′-Se-yl)-2,4-O-benzylidene-1-deoxy-D-erythritol-3-sulfate (28).
- Column chromatography [CHCl3:MeOH, 15:1] of the crude product gave an amorphous solid (96%). NMR showed the presence of two isomers (3:1) at the stereogenic selenium center which were separated on analytical HPLC [acetonitrile/H2O]. Anal. Calcd for C37H40O9SSe: C, 59.99; H, 5.45. Found: C, 59.91; H, 5.37.
- 1-((1′,4′-Dideoxy-1′,4′-imino-D-arabinitol)-4′-N-yl)-2,4-O-benzylidene-1-deoxy-L-erythritol-3-sulfate (30).
- A mixture of 1,4-Dideoxy-1,4-imino-D-arabinitol (19) (100 mg, 0.7 mmol) and 2,4-O-benzylidene-L-erythritol-1,3-cyclic sulfate (10) (235 mg, 1.2 equiv) were dissolved in dry MeOH (0.5 mL) and anhydrous K2CO3 (15 mg) was added. The mixture was stirred in a Caries tube in an oil-bath (75° C.) overnight. The solvent was removed under reduced pressure and column chromatography [CH2Cl2:MeOH, 4.5:1] of the crude product gave an amorphous solid (219 mg, 72%). 1H NMR (CD3OD): δ7.53-7.30 (5H, m, Ar), 5.61 (1H, s, H-5), 4.53 (1H, dd, J=11.1, 5.2 Hz, H-4a), 4.25 (1H, m, H-2), 4.20 (1H, ddd, J=9.8, 5.2, 4.4 Hz, H-3), 4.11 (1H, br-s, H-2′), 3.99-3.84 (4H, m, H-1a, H-3′, H-5′a, H-5′b), 3.82 (1H, dd, J=10.7, 9.8 Hz H-4b) 3.58 (1H, m, H-1′a), 3.55-3.42 (2H, m, H-1′b, H-4′), 3.38 (1H, m, H-1b); 13C NMR (100.6 MHz, CD3OD): δ138.72 (Cipso), 130.12 (Cpara), 129.21, 127.39 (4Cortho+meta), 102.33 (C-5), 78.01 (C-4′, C-3′, C-2), 76.31 (C-2′), 70.29 (C-4), 69.02 (C-3), 62.64 (C-1′), 60.51 (C-5′), 58.46 (C-1); MALDI-TOF MS: m/e 428 (M++Na) ,406 (M++H); HRMS. Calcd for C16H23O9SN (M+H): 406.1179. Found: 406.1192.
- 1-((1′,4′-Dideoxy-1′,4′-imino-L-arabinitol)-4′-N-yl)-2,4-O-benzylidene-1-deoxy-D-erythritol-3-sulfate (31).
- A mixture of 1,4-Dideoxy-1,4-imino-L-arabinitol (16) (80 mg, 0.6 mmol) and 2,4-O-benzylidene-D-erythritol-1,3-cyclic sulfate (7) (190 mg, 1.2 equiv) were dissolved in dry MeOH (0.5 mL) and anhydrous K2CO3 (10 mg) was added. The mixture was stirred in a Caries tube in an oil-bath (75° C.) overnight. The solvent was removed under reduced pressure and column chromatography [CH2Cl2:MeOH, 5:1] of the crude product gave an amorphous solid (175 mg, 72%). 1H NMR (CD3OD): δ7.52-7.31 (5H, m, Ar), 5.62 (1H, s, H-5), 4.53 (1H, dd, J=10.9, 5.2 Hz, H-4a), 4.28 (1H, m, H-2), 4.20 (1H, ddd, J=9.7, 5.1, 4.6 Hz, H-3), 4.14 (1H, br-s, H-2′), 4.03 (1H, m, H-1a), 3.98-3.84 (3H, m, H-3′, H-5′a, H-5′b), 3.81 (1H, dd, J=10.9, 10 Hz H-4b) 3.63 (1H, m, H-1′a), 3.55-3.42 (2H, m, H-1′b, H-4′), 3.38 (1H, m, H-1b); 13C NMR (100.6 MHz, CD3OD): δ138.66 (Cipso), 130.15 (Cpara), 129.23, 127.40 (4Cortho+meta), 102.34 (C-5), 77.81 (C-4′), 77.52 (C-3′, C-2), 76.19 (C-2′), 70.27 (C-4), 68.92 (C-3), 62.68 (C-1′), 60.41 (C-5′), 58.61 (C-1); MALDI-TOF MS: m/e 428 (M++Na) 406 (M++H).
- The protected compound was dissolved in AcOH:H2O, 4:1 (3 mL) and stirred with Pd-C (80 mg) under H2 (52 psi). After 60 h the reaction mixture was filtered through a pad of Celite, which was consequently washed with MeOH. The combined filtrates were concentrated and the residue was purified by column chromatography.
- 1-(1′,4′-Anhydro-4′-thio-D-arabinitol)-4′-S-yl)-1-deoxy-L-erythritol-3-sulfate (1).
- Column chromatography [CHCl3:MeOH:H2O, 7:3:1] of the crude product gave an amorphous solid (67%). [α]D +2.1° (c 0.48, MeOH); 1H NMR (pyridine-d5): δ5.25 (1H, ddd, J=7.4, 3.8, 3.6 Hz, H-3), 5.14-5.09 (2H, m, H-3′, H-2′), 5.00 (1H, m, H-2), 4.78 (1H, dd, J=13.0, 4.9 Hz H-1a), 4.70 (1H, m, H-4′), 4.63 (1H, dd, J=13.0, 4.0 Hz H-1b), 4.61 (1H, dd, J=11.8, 3.7 Hz H-4a)4.53 (2H, m, H-5′a, H-5′b),4.38 (1H, dd, J=11.8, 3.8 Hz H-4b), 4.32 (2H, br-s, H-1′a, H-1′b); 13C NMR (100.6 MHz, pyridine-d5): δ79.14 (C-3), 79.06 (C-3′), 78.18 (C-2′), 72.30 (C-4′), 67.44 (C-2), 62.05 (C-4), 59.98 (C-5′), 52.46 (C-1), 50.35 (C-1′). HRMS. Calcd for C9H18O9S2 (M+H): 335.0471. Found: 335.0481.
- 1-((1′,4′-Anhydro-4-thio-D-arabinitol)-4′-S-yl)-1-deoxy-D-erythritol-3-sulfate (23).
- Column chromatography [CHCl3:MeOH:H2O, 7:3:1] of the crude product gave an amorphous solid (59%). [α]D −35.6° (c 0.86, MeOH); 1H NMR (pyridine-d5): δ5.19 (1H, ddd, J=8.0, 4.1, 3.6 Hz, H-3), 5.17-5.12 (2H, m, H-2′, H-3′), 5.00 (1H, ddd, J=8.0, 5.3, 4.1 Hz, H-2), 4.83 (1H, dd, J=13.0, 5.1 Hz H-1a), 4.78 (1H, m, H-4′), 4.65 (1H, dd, J=11.9, 3.8 Hz H-4a), 4.64-4.57 (2H, m, H-5′a, H-5′b),4.53 (1H, dd, J=13.0, 4.1 Hz H-1b), 4.40 (1H, dd, J=11.9, 3.8 Hz H-4b), 4.29 (1H, dd, J=12.7, 39 Hz H-1′a), 4.17 (1H, dd, J=12.7, 2.6 Hz H-1′b); 13C NMR (100.6 MHz, pyridine-d5): δ79.46 (C-3), 79.38 (C-3′), 78.94 (C-2′), 71.94 (C-4′), 67.52 (C-2), 62.02 (C-4), 60.26 (C-5′), 52.64 (C-1), 51.01 (C-1′). HRMS. Calcd for C9H18O9S2 (M+H): 335.0471. Found: 335.0486.
- 1-(1′,4′-Anhydro-4′-thio-L-arabinitol)-4′-S-yl)-1-deoxy-D-erythritol-3-sulfate (25).
- Column chromatography [CHCl3:MeOH:H2O, 7:3:1] of the crude product gave an amorphous solid (80%). [α]D +1.1° (c 1.5, MeOH); 1H NMR (pyridine-d5): δ5.23 (1H, ddd, J=7.4, 3.8, 3.7 Hz, H-3), 5.11 (1H, m, H-3′), 5.10 (1H, m, H-2′), 4.98 (1H,m, H-2), 4.76 (1H, dd, J=11.7, 3.7 Hz H-1a), 4.70 (1H, m, H-4′), 4.63 (1H, dd, J=11.7, 3.8 Hz H-1b), 4.60 (1H, dd, J=11.8, 3.7 Hz H-4a)4.51 (2H, m, H-5′a, H-5′b),4.35 (1H, dd, J=11.8, 4.0 Hz H-4b), 4.31 (2H, m, H-1′a, H-1′b); 13C NMR (100.6 MHz, pyridine-d5): δ79.38 (C-3, C-2′), 78.41 (C-3′), 72.51 (C-4′), 67.63 (C-2), 62.23 (C-4), 60.21 (C-5′), 52.60 (C-1), 50.57 (C-1′), HRMS. Calcd for C9H18O9S2 (M+H): 335.0471. Found: 335.0466.
- 1-((1′,4′-Dideoxy-1′,4′-imino-D-arabinitol)-4′-N-yl)-1-deoxy-L-erythritol-3-sulfate (2).
- Column chromatography [CHCl3:MeOH:H2O, 7:3:1] of the crude product gave an amorphous solid (64%). 1H NMR (CD3OD): δ4.26-4.20 (2H, m H-2, H-3), 4.15 (1H, m, H-2′), 3.98 (1H,br-s, H-3′), 3.94-3.87 (3H,m, H-5′a, H-5′b, H-4′a), 3.81 (1H, dd, J=12.0, 3.5 Hz H-4b), 3.74-3.62 (2H, m, H-1a, H-1′a), 3.49-3.42 (1H, m, H-1′b),3.40-3.35 (1H, m, H-4′), 3.15 (1H, m, H-1b); 13C NMR (100.6 MHz, CD3OD): δ81.17 (C-3), 78.27 (C-3′),77.86 (C-4′), 76.19 (C-2′), 68.07 (C-2), 62.57 (C-1′), 61.67(C-4), 60.72 (C-1, C-5′). HRMS. Calcd for C9H18O9SN (M+H): 318.0859. Found: 318.0863.
- 1-((1′,4′-Dideoxy-1′,4′-imino-L-arabinitol)-4′-N-yl)-1-deoxy-D-erythritol-3-sulfate (32).
- Column chromatography [CHCl3:MeOH:H2O, 7:3:1] of the crude product gave an amorphous solid (77%). 1H NMR (CD3OD): δ4.25 (1H, m H-2), 4.23(1H, m, H-3), 4.16 (1H, br-s, H-2′), 3.99 (1H,br-s, H-3′), 3.94-3.87 (3H,m, H-5′a, H-5b′, H-4a), 3.81 (1H, dd, J=12.1, 3.6 Hz H-4b), 3.77-3.64 (2H, m, H-1a, H-1′a), 3.55-3.39 (2H, m, H-1′b, H-4′), 3.22 (1H, m, H-1b); 13C NMR (100.6 MHz, CD3OD): δ81.18 (C-3), 78.23 (C-3′, C-4′), 76.10 (C-2′), 68.05 (C-2), 62.66 (C-1′), 61.88(C-4), 60.49 (C-1, C-5′). HRMS Calcd for C9H18O9SN (M+H): 318.0859. Found: 318.0856.
- As will be apparent to those skilled in the art in the light of the foregoing disclosure, many alterations and modifications are possible in the practice of this invention without departing from the spirit or scope thereof. Accordingly, the scope of the invention is to be construed in accordance with the substance defined by the following claims.
- 1. Yoshikawa, M. et al. Tetrahedron Left. 1997, 38(48), 8367-8370.
- 2. Yoshikawa, M. et al. Chem. Pharm. Bull. 1998, 46(8), 1339-1340.
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- 5. Mohla, S. et al. Anticancer Res. 1990, 10, 1515-1522.
- 6. Goss, P. E. et al. Cancer Res. 1994, 54, 1450-1457.
- 7. Eames, J. et al. Tetrahedron Lett. 1998, 39(10), 1247-1250.
- 8. Calvo-Flores, F. G. et al. J. Org. Chem. 1997, 62, 3944-3961.
- 9. Foster, A. B. et al. J. Chem. Soc. 1961, 5005-5011.
- 10. MacDonald, D. L. et al. J. Am. Chem. Soc. 1956, 78, 3720-3722.
- 11. Yoshimura, Y. et al. J. Org. Chem. 1997, 62, 3140-3152.
- 12. Satoh, H. et al. Bioorg. Med. Chem. Lett. 1998, 8(9), 989-992.
- 13. Fleet, G. et al. Tetrahedron. 1986, 42, 5685-5692.
Claims (19)
1. A non-naturally occurring compound selected from the group consisting of compounds represented by the general formula (I) and stereoisomers and pharmaceutically acceptable salts thereof:
where X is selected from the group consisting of S, Se and NH; R1, R2, R3, R4 and R5 are the same or different and are selected from the group consisting of H, OH, SH, NH2, halogens and constituents of compounds selected from the group consisting of cyclopropanes, epoxides, aziridines and episulfides; and R6 is selected from the group consisting of H and optionally substituted straight chain, branched, or cyclic, saturated or unsaturated hydrocarbon radicals.
2. The compound as defined in claim 1 , wherein R1, R2, R3, R4 and R6 are OH and R5 is H.
3. The compound as defined in claim 1 , wherein R1, R2, R3, R4 and R5 are OH and R6 is C3H7O3.
4. A process for the production of the compound of claim 1 , comprising reacting a cyclic sulfate having the general formula (II) with a 5-membered ring sugar having the general formula (III)
where X is selected from the group consisting of S, Se, and NH; R1 and R2 are selected from the group consisting of H and a protecting group; R3 is selected from the group consisting of H and optionally substituted straight chain, branched, or cyclic, saturated or unsaturated hydrocarbon radicals and their protected derivatives; and R4, R5 and R6 are the same or different and are selected from the group consisting of H, OH, SH, NH2, halogens and constituents of compounds selected from the group consisting of cyclopropanes, epoxides, aziridines and episulfides and their protected derivatives
5. The process as defined in claim 4 , wherein said cyclic sulfate is a 2,4-di-O-protected-D-or L-erythritol-1,3-cyclic sulfate.
6. The process as defined in claim 5 , wherein said cyclic sulfate is 2,4-O-Benzylidene-D-or L-erythritol-1,3-cyclic sulfate.
7. The process as defined in claim 4 , wherein R3 is a protected polyhydroxylated alkyl chain.
8. The process as defined in claim 4 , wherein R4, R5, and R6 are selected from the group consisting of OH and OCH2C6H5.
9. The process as defined in claim 4 , comprising the step of opening the cyclic sulfate (II) by nucleophilic attack of the heteroatom X on the sugar (III).
10. The process as defined in claim 4 , wherein the coupling reaction is carried out in a solvent selected from the group consisting of acetone and methanol.
11. The process as defined in claim 10 , further comprising the step of adding a base to said solvent.
12. A pharmaceutical composition comprising an effective amount of a compound according to claim 1 together with a pharmaceutically acceptable carrier.
13. A method of treating a carbohydrate metabolic disorder in an affected patient comprising the step of administering to said patient a therapeutically effective amount of a compound according to claim 1 .
14. The method of claim 13 , wherein said carbohydrate metabolic disorder is non-insulin dependent diabetes.
15. A method of treating tumor cell proliferation and metastasis in an affected patient comprising administering to said patient a therapeutically effective amount of a compound according to claim 1 .
17. A compound selected from the group consisting of compounds represented by the general formula (XII) and stereoisomers and pharmaceutically acceptable salts thereof:
where X is selected from the group consisting of S, Se and NH; R1, R2, R3, R4, R5 and R6 are the same or different and are selected from the group consisting of H, OH, SH, NH2, halogens and constituents of compounds selected from the group consisting of cyclopropanes, epoxides, aziridines and episulfides; and R7 is selected from the group consisting of H and optionally substituted straight chain, branched, or cyclic, saturated or unsaturated hydrocarbon radicals.
18. A process for the production of the compound of claim 17 , comprising reacting a cyclic sulfate having the general formula (II) with a 6-membered ring sugar having the general formula (XI)
where X is selected from the group consisting of S, Se, and NH; R1 and R2 are selected from the group consisting of H and a protecting group; R3 is selected from the group consisting of H and optionally substituted straight chain, branched, or cyclic, saturated or unsaturated hydrocarbon radicals and their protected derivatives; and R4, R5, R6 and R7 are selected from the group consisting of H, OH, SH, NH2, halogens and constituents of compounds selected from the group consisting of cyclopropanes, epoxides, aziridines and episulfides and their protected derivatives.
19. The process of claim 18 , wherein R3 is a protected polyhydroxylated alkyl chain or its protected derivative.
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US10/226,657 US20030191104A1 (en) | 2000-01-07 | 2002-08-22 | Glycosidase inhibitors and methods of synthesizing same |
US10/877,490 US20050065139A1 (en) | 2000-07-28 | 2004-06-25 | Glycosidase inhibitors and methods of synthesizing same |
PCT/CA2004/000958 WO2004113289A2 (en) | 2002-08-22 | 2004-06-25 | Glycosidase inhibitors and methods of synthesizing same |
US11/368,014 US8389565B2 (en) | 2000-01-07 | 2006-03-02 | Glycosidase inhibitors and methods of synthesizing same |
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Cited By (5)
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US20050065139A1 (en) * | 2000-07-28 | 2005-03-24 | Pinto Brian Mario | Glycosidase inhibitors and methods of synthesizing same |
US20060247222A1 (en) * | 2000-01-07 | 2006-11-02 | Simon Fraser University | Glycosidase inhibitors and methods of synthesizing same |
US20080279808A1 (en) * | 2005-11-15 | 2008-11-13 | Jorge Ruas Da Silva | 2,3,4,5-Tetrahydroxy-6-Sulfooxy Hexanoic Acid, Pharmaceutically Acceptable Salts and Equilibrium Forms Thereof, Processes for Their Preparation, Pharmaceutical Compositions Comprising Such Compounds and Their Medical Use |
US20120034322A1 (en) * | 2009-04-22 | 2012-02-09 | Fujifilm Corporation | Intestinal bacterial flora distribution ratio regulator |
US9073897B2 (en) | 2011-01-31 | 2015-07-07 | Kinki University | Cyclic sulfonium salt, process for production of same, and α-glucosidase inhibitor comprising same |
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JP4516282B2 (en) * | 2003-04-24 | 2010-08-04 | 森下仁丹株式会社 | Novel substance having α-glucosidase inhibitory activity and food containing the same |
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AU2008254594B2 (en) * | 2007-05-22 | 2013-06-27 | Amicus Therapeutics, Inc. | New method for preparing isofagomine and its derivatives |
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EP0389723A1 (en) * | 1989-03-29 | 1990-10-03 | Merrell Dow Pharmaceuticals Inc. | Novel alpha-glucosidase inhibitors |
US6121489A (en) * | 1996-03-05 | 2000-09-19 | Trega Biosciences, Inc. | Selectively N-alkylated peptidomimetic combinatorial libraries and compounds therein |
GB9620884D0 (en) * | 1996-10-07 | 1996-11-27 | Mcdermott Sa J Ray | Reel to reel transfer of pipe and large diameter tubing |
JP3030008B2 (en) | 1997-07-07 | 2000-04-10 | 株式会社 タカマシステム | Compound having an inhibitory action on α-glucosidase |
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US20060247222A1 (en) * | 2000-01-07 | 2006-11-02 | Simon Fraser University | Glycosidase inhibitors and methods of synthesizing same |
US8389565B2 (en) | 2000-01-07 | 2013-03-05 | Simon Fraser University | Glycosidase inhibitors and methods of synthesizing same |
US20050065139A1 (en) * | 2000-07-28 | 2005-03-24 | Pinto Brian Mario | Glycosidase inhibitors and methods of synthesizing same |
US20080279808A1 (en) * | 2005-11-15 | 2008-11-13 | Jorge Ruas Da Silva | 2,3,4,5-Tetrahydroxy-6-Sulfooxy Hexanoic Acid, Pharmaceutically Acceptable Salts and Equilibrium Forms Thereof, Processes for Their Preparation, Pharmaceutical Compositions Comprising Such Compounds and Their Medical Use |
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CN100341870C (en) | 2007-10-10 |
WO2001049674A3 (en) | 2001-11-29 |
CA2396688A1 (en) | 2001-07-12 |
EP1248779A2 (en) | 2002-10-16 |
JP2003519220A (en) | 2003-06-17 |
AU2659101A (en) | 2001-07-16 |
US6455573B1 (en) | 2002-09-24 |
CA2396688C (en) | 2013-05-21 |
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WO2001049674A2 (en) | 2001-07-12 |
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