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US20030092067A1 - Substrates and inhibitors of proteolytic enzymes - Google Patents

Substrates and inhibitors of proteolytic enzymes Download PDF

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US20030092067A1
US20030092067A1 US10/259,420 US25942002A US2003092067A1 US 20030092067 A1 US20030092067 A1 US 20030092067A1 US 25942002 A US25942002 A US 25942002A US 2003092067 A1 US2003092067 A1 US 2003092067A1
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Martin Quibell
Tony Johnson
Terance Hart
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Sanofi Pasteur Holding Ltd
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Peptide Therapeutics Ltd
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Priority claimed from GBGB9616115.3A external-priority patent/GB9616115D0/en
Priority claimed from GBGB9624584.0A external-priority patent/GB9624584D0/en
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Priority to US10/259,420 priority Critical patent/US20030092067A1/en
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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K7/00Peptides having 5 to 20 amino acids in a fully defined sequence; Derivatives thereof
    • C07K7/04Linear peptides containing only normal peptide links
    • C07K7/06Linear peptides containing only normal peptide links having 5 to 11 amino acids
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01JCHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
    • B01J19/00Chemical, physical or physico-chemical processes in general; Their relevant apparatus
    • B01J19/0046Sequential or parallel reactions, e.g. for the synthesis of polypeptides or polynucleotides; Apparatus and devices for combinatorial chemistry or for making molecular arrays
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K1/00General methods for the preparation of peptides, i.e. processes for the organic chemical preparation of peptides or proteins of any length
    • C07K1/04General methods for the preparation of peptides, i.e. processes for the organic chemical preparation of peptides or proteins of any length on carriers
    • C07K1/047Simultaneous synthesis of different peptide species; Peptide libraries
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K5/00Peptides containing up to four amino acids in a fully defined sequence; Derivatives thereof
    • C07K5/04Peptides containing up to four amino acids in a fully defined sequence; Derivatives thereof containing only normal peptide links
    • C07K5/06Dipeptides
    • C07K5/06008Dipeptides with the first amino acid being neutral
    • C07K5/06017Dipeptides with the first amino acid being neutral and aliphatic
    • C07K5/06034Dipeptides with the first amino acid being neutral and aliphatic the side chain containing 2 to 4 carbon atoms
    • C07K5/06043Leu-amino acid
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K5/00Peptides containing up to four amino acids in a fully defined sequence; Derivatives thereof
    • C07K5/04Peptides containing up to four amino acids in a fully defined sequence; Derivatives thereof containing only normal peptide links
    • C07K5/06Dipeptides
    • C07K5/06191Dipeptides containing heteroatoms different from O, S, or N
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K7/00Peptides having 5 to 20 amino acids in a fully defined sequence; Derivatives thereof
    • C07K7/02Linear peptides containing at least one abnormal peptide link
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/68Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01JCHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
    • B01J2219/00Chemical, physical or physico-chemical processes in general; Their relevant apparatus
    • B01J2219/00274Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
    • B01J2219/00277Apparatus
    • B01J2219/00279Features relating to reactor vessels
    • B01J2219/00306Reactor vessels in a multiple arrangement
    • B01J2219/00313Reactor vessels in a multiple arrangement the reactor vessels being formed by arrays of wells in blocks
    • B01J2219/00315Microtiter plates
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01JCHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
    • B01J2219/00Chemical, physical or physico-chemical processes in general; Their relevant apparatus
    • B01J2219/00274Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
    • B01J2219/00277Apparatus
    • B01J2219/00497Features relating to the solid phase supports
    • B01J2219/00504Pins
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01JCHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
    • B01J2219/00Chemical, physical or physico-chemical processes in general; Their relevant apparatus
    • B01J2219/00274Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
    • B01J2219/00718Type of compounds synthesised
    • B01J2219/0072Organic compounds
    • CCHEMISTRY; METALLURGY
    • C40COMBINATORIAL TECHNOLOGY
    • C40BCOMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
    • C40B60/00Apparatus specially adapted for use in combinatorial chemistry or with libraries
    • C40B60/14Apparatus specially adapted for use in combinatorial chemistry or with libraries for creating libraries

Definitions

  • the present invention relates to the field of compounds which are substrates or inhibitors of proteolytic enzymes and to apparatus and methods for identifying substrates or inhibitors for proteolytic enzymes.
  • proteolytic enzyme inhibitors have been the focus of much attention in the pharmaceutical industry, because they play a variety of roles in a multitude of biological systems. Their proteolytic activities are related to processes ranging from cell invasion associated with metastatic cancer to evasion of an immune response, as seen in certain is parasitic organisms; from nutrition to intracellular signalling to the site-specific proteolysis of viral proteases and eukaryotic hormone-processing enzymes.
  • the traditional random screening methods for the identification of lead molecules as inhibitors of proteolytic enzymes are often laborious and time-consuming. Therefore new and efficient methods which can accelerate the drug discovery process are greatly in demand.
  • proteases contain an active catalytic site which tends to become increasingly activated as the recognition pockets 1 (S 1 and S 2 etc) and (S 1 ′ and S 2 ′ etc) become better occupied. Therefore, it is important that those parts (P 1 and P 2 etc) (P 1 ′ and P 2 ′ etc) of the inhibitor that best fit into these pockets are identified as quickly as possible in order to design novel protease inhibitors. Therefore, we have devised a combinatorial method for the rapid identification of these binding motifs which will greatly expedite the synthesis of inhibitors of a variety of proteolytic enzymes such as aspartyl proteases, serine proteases, metallo proteases and cysteinyl proteases.
  • proteolytic enzymes such as aspartyl proteases, serine proteases, metallo proteases and cysteinyl proteases.
  • Proteases of interest include (but are not limited to):
  • Aspartyl proteases such as renin, HIV, cathepsin D and cathespin E etc.
  • Metalloproteases such as ECE, gelatinase A and B, collagenases, stromolysins etc.
  • Cysteinyl proteases such as apopain, ICI, DerPI, cathepsin B, cathepsin K etc.
  • Serine proteases such as thrombin, factor VIIa, factor Xa, elastase, trypsin.
  • Threonyl proteases such as proteasome S.
  • FRET fluorescence resonance energy transfer
  • Bratovanova and Petkov 12 have synthesised fluorogenic substrates from peptide 4-nitroanilides. N-acylation of peptide 4-nitroanilides with the aminobenzoyl (ABz) group yielded substrates that are internally quenched by the presence of the 4-nitroanilide moiety. Upon hydrolysis of the aminoacyl-4-nitroanilide bond, the highly fluorescent N-ABz group is released attached either to an amino acid or peptide.
  • Immobilised libraries where substrates are attached to a polymer or biopolymer support, have also been used for mapping protease binding sites.
  • Singh et al. reported recently that enzymatic substrate activity of 38 selected octapeptides attached via a linker to controlled pore glass is predictive of the same activity of similar peptides in solution.
  • these results are preliminary and only for a specific example. Therefore, it is not clear whether immobilised substrates attached to polymers can reliably replace soluble substrates in mapping the hindered protease binding sites, especially since the hydrophilic or lipophilic nature of the polymer and the size of the interstices within the polymer are bound to influence the reaction between the enzyme and its substrates.
  • ANAI 2-anthracene N-acetylimidazole
  • BPE B-phycoerythrin
  • CF carboxyfluorescein succinimidyl ester
  • CPM 7-doethylamino-3-(4′maleimidylphenyl)-4-methylcoumarin
  • CY5 carboxymethylindocyanine-N-hydroxysuccinimidyl ester, diI-C 18 , 1,1′-dioctadecyl-3,3,3′3′-tetramethyl-indocarbocyanine
  • DiO-C 14 3,3′-ditetradecyloxacarbocyanine
  • DABM 4-dimethylaniniphenylazo-phenyl-4′-maleimide
  • DACM (7-(dimethylamino)coumarin-4-yl)-acetyl
  • DANZ dansylaziridine
  • DDPM N-(4-dimethylamino
  • Garmann and Phillips have suggested the use of FRET substrates in which the fluorogenic and quencher moieties are attached via thiol or amino functional groups after the peptide has been synthesised, but this has the disadvantage that they are not in library form and that these functional amino and thiol groups need to be selectively revealed after the peptide has been synthesised.
  • Wang et al. have suggested the use of the EDANS and DABCYL fluorescor and quencher pairing for the individual synthesis of substrates for proteolytic enzymes.
  • FIGS. 1 to 14 inclusive exemplify component distributions in the plates of a library matrix
  • FIG. 15 illustrates a reaction scheme for production of compound number 4: Boc-Val-Ala-Leu-H wherein
  • FIG. 16 illustrates a reaction scheme for production of active inhibitors of Der P 1 .
  • the present invention relates to the field of:
  • A represents a fluorescor internally quenched by F
  • B, C, D, and E represent groups such that the scissile bond between any two of these groups is a suitable bond
  • F represents a quencher capable of internally quenching the fluorescor A
  • n represents an integer between 1 and 4 inclusive.
  • the suitable bond is an unsubstituted amide bond (see Example 1); in other embodiments the suitable bond is an ester bond (see Example 2).
  • B, C, D, E are amino acids or hydroxy acids. That is a molecule with an amine or hydroxy terminus and a carboxylic acid terminus.
  • the amine/hydroxy group may be positioned on the same carbon atom or separated by a number of atoms and atom types.
  • the molecules may be cyclic or alicyclic. They may be linear or cyclic on the same structure
  • BCDE can be on a central scaffold (linear or cyclic)
  • Non scissile bonds may include sulphonamide, urea, aminomethylene.
  • the invention provides a combinatorial library of FRET compounds comprising a mixture of compounds of formula [I].
  • the invention provides for the use of such a combinatorial FRET library in a method which provides rapid generation of structure-activity relationships (SAR) which comprises detection and measurement of proteolytic enzyme activity by carrying out an assay with a library of combinatorial FRET (fluorescence resonance energy transfer) molecules to find a substrate or substrates for the enzyme.
  • SAR structure-activity relationships
  • an identified substrate can be synthesised and used in biological assay for proteolytic enzymes. Novel substrates are included in the scope of the invention.
  • the invention provides for the use of such a combinatorial FRET library in a method for detection and measurement of proteolytic enzyme activity against compounds of the library.
  • the invention provides a method which comprises the identification of an enzyme inhibitor or inhibitors wherein a FRET compound which has been
  • [0054] identified as a substrate is used in an inhibition assay with the enzyme separately against a panel of possible inhibitors.
  • the invention provides a set of compounds which comprises two complementary FRET compound libraries.
  • Such a set will be referred to hereafter as “apparatus” because it allows for the screening or assay method for identifying substrates or inhibitors of proteolytic enzymes.
  • This set of compounds constituting an apparatus is capable of providing an auto-deconvoluting combinatorial library as will be described below.
  • the invention provides a method of identifying and synthesising an inhibitor of a proteolytic enzyme which comprises detection and measurement of proteolytic enzyme activity by carrying out an assay with a library of combinatorial FRET (fluorescence resonance energy transfer) molecules, deconvoluting the library to find a substrate or substrates for the enzyme and synthesis of an inhibitor based on the substrate or substrates.
  • the direct product of this method is one or more novel proteolytic enzyme inhibitors.
  • the invention provides an inhibition assay which uses a FRET molecule, which has been identified as a substrate for the enzyme, wherein the molecule is assayed with the enzyme separately against a panel of possible inhibitors.
  • the invention provides a complementary pair of compound libraries L 1 and L 2 which constitute a set containing compounds of formula:
  • the invention provides a method of screening for enzymic activity using the libraries L 1 , L 2 is described above in which the P 1 mixtures of L 1 and the P 2 mixtures of L 2 are each placed separately into individual wells of well plates, the well plates having wells arranged in a format adapted to allow deduction of a unique active compound formula from the presence of activity in one well of L 1 and one well of L 2 .
  • the apparatus of the invention preferably comprises two complementary compound libraries, L 1 and L 2 , each containing n ⁇ 1600 compounds of the invention, of the type A-B- 1-10 -C 1-10 -D 1-8 -n(E 1-2 )-F-G [II], in which:
  • A a fluorescor internally quenched by F, preferably an unsubstituted or substituted anthranilic acid derivative, connected by an amide bond to B
  • B, C, D, E are natural or unnatural amino acid residues connected together by suitable bonds, although B, C, D and E can be any set of groups, provided that the scissile bond between D-E is an unsubstituted bond.
  • F a quencher capable of internally quenching the fluorescor A, preferably an unsubstituted or substituted 3-nitrotyrosine derivative.
  • G optionally present and is a hydrophilic moiety, preferably an aspartyl amide moiety. If present, G advantageously ensures that all compounds in the library are imparted with aqueous solubility. Also, G should not be a substrate for any type of enzyme.
  • n any integer between 1 and 4 inclusive.
  • the scissile bond could be between B-C is or C-D.
  • A-B 1-5 -C-D-E 1-2 -F-G represents a mixture of the following ten compounds:
  • Both compound libraries, L 1 and L 2 , of the above type are synthesized using solid phase techniques using the Multipin approach 24 such that each library contains 1600n compounds as 80n mixtures of 20 distinct, identifiable compounds. These 20 component mixtures are then placed separately into each of 80 wells of a 96 well plate (the other two lanes are used for control experiments) and then screened against a known quantity of the protease.
  • the residual enzymatic activity in each well can be quantified by the addition of the most potent fluorogenic substrate for the enzyme, S 1 , which is found in the 16 ⁇ n compound library. Because of the nature of the library design this can be quickly prepared and purified. If there is no appearance of increased fluorescence with the known substrate, S 1 , then the presence of an enzyme inhibitor can be inferred, which again can be quickly identified without the need for resynthesis.
  • a second complementary library is synthesised as follows (FIG. 3).
  • first column of the first row (A 1 ) of the first plate (P 1 ) of the library, L 2 (hereinafter designated as location A 1 ,P 1 ,L 2 ), there will be ten C components, two D components (D 1 and D 2 ), one B component, B 1 , and one E component, E 1 .
  • L 2 In the tenth column of the first row (A 10 ) of the first plate (P 1 ) of the library, L 2 , (hereinafter designated as location A 10 ,P 1 ,L 2 ), there will be ten C components, two D components (D 1 and D 2 ), one B component, B 10 , and one E component, E 1 .
  • L 2 In the first column of the second row (B 1 ) of the first plate (P 1 ) of the library, L 2 , (hereinafter designated as location B 1 ,P 1 ,L 2 ), there will be ten C components, two D components (D 1 and D 2 ), one B component, B 1 , and one E component, E 2 .
  • each of the 80 of wells contains a mixture of 20 components providing 1600 compounds for screening.
  • library, L 2 four plates are used in which only the first two rows are employed, providing 20 wells of 20 components per well per plate, and furnishing the same 1600 compounds as are present in library L 1 , but in a format in which no two compounds found together in library, L 1 , will be found together in library, L 2 .
  • the compounds contained in the two libraries L 1 and L 2 are themselves complementary, in that any two compounds which are found together in a 20 component mixture in the same location (e.g. A 1 P 1 L 1 ) in library L 1 , are not found together in any of the 20 component mixtures in any location of the library L 2 .
  • a second complementary library is synthesised as follows.
  • first column of the first row (A 1 ) of the first plate (P 1 ) of the library, L 2 (hereinafter designated as location A 1 ,P 1 ,L 2 ), there will be ten C components, two D components (D 1 and D 2 ), one B component, B 1 , and one E component, E 1 (FIG. 11).
  • L 2 In the first column of the second row (B 1 ) of the second plate (P 2 ) of the library, L 2 , (hereinafter designated as location B 1 ,P 2 ,L 2 ), there will be ten C components, two D components (D 3 and D 4 ), one B component, B 1 , and one E component, E 2 .
  • location B 1 ,P 2 ,L 2 In the tenth column of the eighth row (H 10 ) of the second plate (P 2 ) of the library, L 2 , (H 10 ,P 2 ,L 2 ), there will be ten C components, two D components (D 3 and D 4 ), one B component, B 10 , and one E component, E 8 .
  • a numerical interrelationship can be defined as follows:
  • Primary and Secondary plates preferably have the same number of compounds per well [X]: otherwise there are two values, having X p and X s respectively.
  • the primary library comprises [np] plates.
  • number of wells [N] is also defined by the number of rows [Rp] and number of columns [Cp]:
  • N Rp.Cp (4)
  • the FRET strategy is based on the synthesis of two orthogonal sets of mixtures in solution. These solutions are each indexed in two dimensions.
  • the positional preferences of sub-units (in this case amino acids) are optimised with respect to all other variant positions simultaneously.
  • the synergistic relationship between all four positions is realised and both positive, beneficial and negative, deactivating data are generated. This leads to families (sub-populations) of substrates and their sub-unit preferences.
  • the data can be fed into molecular modelling programs to generate pharmacophoric descriptors that encompass both the desirable features (from the positive data) and indicate undesirable interactions (from the negative data sets). Note that a one dimensional scan only indicates one position at a time as ‘most active’ and does not explore the synergistic relationship between positions.
  • the proteolytic enzyme of interest is Der P 1 , which is found in house dust mite faeces.
  • the example illustrates the synthesis of a number of FRET compounds in which the suitable bond is an unsubstituted amide bond, their use as a library for screening for potential is substrates of Der P 1 , and subsequent identification and synthesis of active inhibitors of the enzyme.
  • N- ⁇ -fluorenylmethoxycarbonyl protecting group of the coupled residues were cleaved using 20% piperidine in dimethylformamide (DMF) for 30 minutes at 20° C.
  • the coupling reactions for the free acids such as Boc-ABz-OH (Boc-2-aminobenzoic acid), and Fmoc-(3-nitro)tyrosine-OH were accomplished using 10 equivalents of a mixture of the free acid (1 eq.):TBTU (0.98 eq.): HOBt (0.98 eq.): N-methylmorpholine (1.96 eq.) in dimethylformamide (500 ⁇ L) as solvent for 5 hours at 20° C.
  • the other amino acids were coupled as their pentafluorophenyl esters 26 for 2-6 hours.
  • a third coupling of 10 equivalents (relative to the amino group loading of the crown) for 2 hours in DMF was performed using this coupling protocol with equimolar mixtures of the derivatised pentafluorophenyl esters of the amino acids in slightly less than 1 equivalent, it is possible to obtain approximately equal amounts of the coupled products to the crown.
  • the libraries are constructed with compounds present on each crown.
  • the compounds were cleaved from the crowns directly into the 80 designated wells of the desired 96 well plate.
  • each crown was treated with a mixture (600 ⁇ L) containing trifluoroacetic acid (95%), triethylsilane (5%) for 2 hours at 20° C.
  • the crowns were then washed with trifluoroacetic acid (500 ⁇ L) and this was then combined with the cleavage solution.
  • amino acids comprising group B include Ala, Val, Leu, Ser, Asn, Gln, Glu, Lys, Phe, Pro.
  • the amino acids comprising group C include Ala, Val, Leu, Ser, Asn, Gln, Glu, Lys, Phe, Pro.
  • the amino acids comprising group D include Ala, Val, Ile, Leu, Nle, Ser, Glu, Phe.
  • the ‘Chiron’ multipin kit consists of a standard 8 ⁇ 12 pin holder containing 96 ‘pin stems’ to which are reversibly attached ‘crowns’.
  • the ‘crowns’ provide a reactive polymer surface upon which a growing peptide is anchored during solid phase peptide synthesis.
  • Each crown (the equivalent of the peptide-resin in standard solid phase synthesis) can be considered to be an independent reactor by performing simultaneous synthesis in individual 1 mL wells of industry standard 96 well plates. Each well, and thus each crown, can be charged with a unique set of reagents providing unique sequences to each crown. Common steps such as washing or removal of N ⁇ protection can be performed concomitantly.
  • a 250 mL solvent resistant bath is charged with 200 ml of a 20% piperidine/DMF solution.
  • the multipin assembly is added and deprotection allowed to proceed for 30 minutes.
  • the assembly is then removed and excess solvent removed by brief shaking.
  • the assembly is then washed consecutively with (200 mL each), DMF (5 mins) and MeOH (5 mins, 2 mins, 2 mins) and left to air dry for 15 mins.
  • a 1 cm path length UV cell is charged with 1.2 mL of a 20% piperidine/DMF solution and used to zero the absorbance of the UV spectrometer at a wavelength of 290 nm.
  • the appropriate N ⁇ -Fmoc amino acid pfp esters (10 equivalents calculated from the loading of each crown) and HOBt (10 equivalents) required for the particular round of coupling are accurately weighed into suitable containers.
  • the appropriate N ⁇ -Fmoc amino acids (10 equivalents calculated from the loading of each crown), desired coupling agent e.g. HBTU (9.9 equivalents calculated from the loading of each crown) and activation eg HOBt (9.9 equivalents calculated from the loading of each crown), NMM (19.9 equivalents calculated from the loading of each crown) are accurately weighed into suitable containers.
  • the protected and activated Fmoc amino acid derivatives are then dissolved in DMF (500 ⁇ l for each macrocrown, e.g. for 20 macrocrowns, 20 ⁇ 10 eq ⁇ 7 mmoles of derivative would be dissolved in 10 000 ⁇ L DMF).
  • the appropriate derivatives are then dispensed to the appropriate wells ready for commencement of the ‘coupling cycle’.
  • coupling reactions are allowed to proceed for 2-6 hours (depending upon nature of coupling e.g. Ala to Ala 2 hours Val to Leu 6 hours.
  • Acid mediated cleavage protocols are strictly performed in a fume hood.
  • a polystyrene 96 well plate (1 mL/well) is labelled, then the tare weight measured to the nearest mg.
  • Appropriate wells are then charged with a trifluoroacetic acid/triethylsilane (95:5, v/v, 600 ⁇ l) cleavage solution, in a pattern corresponding to that of the multipin assembly to be cleaved.
  • the multipin assembly is added, the entire construct covered in tin foil and left for 2 hrs.
  • the multipin assembly in then added to another polystyrene 96 well plate (1 mL/well) containing trifluoroacetic acid/triethylsilane (95:5, v/v, 600 ⁇ l) (as above) for 5 mins.
  • the primary polystyrene plate (plus the washings from the secondary plate) is covered with tin foil, held to the is plate with an elastic band. A pin prick is placed in the foil directly above each well and the plate placed at ⁇ 80° C. for 30 mins. The plate is then lyophilised on the ‘Heto freeze drier’ overnight. Where appropriate individual peptides were then weighed and dissolved to 10 mM stock solutions in DMSO prior to biological screening. Alternatively the 20 component mixture is weighed and the peptide/20 component ratio is calculated.
  • This compound was then resynthesised as a single component using the peptide synthesis methodology described herein.
  • the k cat /K m value for the pure substrate in the Der pI assay was measured as 3.5 ⁇ 10 4 M ⁇ 1 s ⁇ 1 , and was considered to be suitably high for use in a high throughput assay for the general screening of inhibitors of Der pI.
  • Plate assays were carried out in 96 well plate format, using 0.1 ug of Der pI per 100 ⁇ L assay volume in each well and using 20 ⁇ M of the substrate. All assays were performed in Assay Buffer (AB; 50 mM potassium phosphate, pH 8.25 containing 1 mM ethylenediaminetetraacetic acid (EDTA) and 1 mM dithiothreitol (DTT). The Der pI enzyme is pre-activated by addition of DTT and this in incubated at room temperature for 5 min. prior to initiation of the assay.
  • Assay Buffer AB; 50 mM potassium phosphate, pH 8.25 containing 1 mM ethylenediaminetetraacetic acid (EDTA) and 1 mM dithiothreitol (DTT).
  • the Der pI enzyme is pre-activated by addition of DTT and this in incubated at room temperature for 5 min. prior to initiation of the assay.
  • each well contains a 5 ⁇ L of a 20 ⁇ M solution of the test compound in DMSO, 10 ⁇ L of a 200 ⁇ M aqueous solution of the substrate, 2, and 85 ⁇ L of Der pI in AB is added to initiate the reaction.
  • Enzyme activity is monitored by fluorescence using 320 nm for excitation and 420 nm for the emission wavelengths using a Labsystems Fluroskan Ascent machine.
  • Kinetic measurements were carried out using a Hitachi F-4500 Fluorescence Spectrophotometer.
  • N-Benzoyl-L-valyl-L-alanyl-L-norleucine was prepared by solid phase benzoylated peptide synthesis as follows:
  • Fmoc-L-norleucine loaded resin was deprotected by 20 treatment with 20% piperidine in DMF over 4 hours. The swollen resin was filtered, washed with 5 ⁇ DMF, 2 ⁇ ether and dried under vacuum for 24 hours.
  • Steps (2) and (3) were carried out repetitively with Fmoc-L-alanine and Fmoc-L-valine to afford resin bound tripeptide H-L-valyl-L-alanyl-L-norleucine.
  • N-Benzoyl-L-valyl-L-alanyl-L-norleucine loaded resin (1.0 g, approx. 1 mmol) was treated with a 1% solution of trifluoroacetic acid in dichloromethane (20 ml) containing triethylsilane (320 ml, 2 mmol) for 1 hour. Resin was removed by filtration and washed with dichloromethane (3 ⁇ 10 ml). Organic layer was collected, evaporated and titrated with ether to afford N-benzoyl-L-valyl-L-alanyl-L-norleucine.(285 mg). Electrospray-MS m/z 407 [MH + ].
  • N-Benzoyl-L-valyl-L-alanyl-L-norleucine bromomethyl ketone N-Benzoyl-L-valyl-L-alanyl-L-norleucine(140 mg, 0.34 mmol) was suspended in dry THF(3 ml) and dry DMF was added dropwise to afford homogeneity. The reaction mixture was cooled to-10° C. and isobutylchloroformate (129 ml, 11.0 mmol) and N-methylmorpholine (109 ml, 1.0 mmol) added with stirring under Argon. The mixture was stirred for 30 minutes before a solution of diazomethane in ether(5 ml, approx.
  • N-Benzoyl-L-valyl-L-alanyl-L-norleucine 2,6-dimethylbenzoyloxymethyl ketone (Electrospray-MS m/z 552 [MH + ]) from of N-benzoyl-L-valyl-L-alanyl-L-norleucine bromomethyl ketone and 2,6-dimethylbenzoic acid.
  • N-Benzoyl-L-valyl-L-alanyl-L-norleucine 2,6-dichlorobenzoyloxymethyl ketone (Electrospray-MS m/z 592 [MH + ] and 594 [MH + ] from of N-benzoyl-L-valyl-L-alanyl-L-norleucine bromomethyl ketone and 2,6-dichlorobenzoic acid.
  • N-Benzoyl-L-valyl-L-alanyl-L-norleucine benzoyloxymethyl ketone (Electrospray-MS m/z 524 [MH + ]) from of N-benzoyl-L-valyl-L-alanyl-L-norleucine bromomethyl ketone and benzoic acid.
  • N-Benzoyl-L-valyl-L-alanyl-L-norleucine 2,3,4,5,6-pentafluorobenzoyloxymethyl ketone (Electrospray-Ms m/z 614 [MH + ]) from of N-benzoyl-L-valyl-L-alanyl-L-norleucine bromomethyl ketone and 2,3,4,5,6-pentafluorobenzoic acid.
  • N-Benzoyl-L-valyl-L-alanyl-L-norleucine 1,1-dimethylpropyloxymethyl ketone (Electrospray-MS m/z 504 [MH + ])from of N-benzoyl-L-valyl-L-alanyl-L-norleucine bromomethyl ketone and 1,1-dimethylpropanoicacid.
  • N-Benzoyl-L-valyl-L-alanyl-L-norleucine N(-benzyloxycarbonyl)-D-serinyl-(O-tert-butyl)oxymethyl ketone (Electrospray-MS m/z 697 [MH + ])from of N-benzoyl-L-valyl-L-alanyl-L-norleucine bromomethyl ketone and N-benzyloxycarbonyl-D-serine-O-tert-butylether.
  • N-Benzoyl-L-valyl-L-alanyl-L-norleucine N(-benzyloxycarbonyl)-D-serineoxy methyl ketone (Electrospray-MS m/z 641 [MH + ])from of N-benzoyl-L-valyl-L-alanyl-L-norleucine bromomethyl ketone and N-benzyloxycarbonyl-D-serine.
  • N-Benzoyl-L-valyl-L-alanyl-L-norleucine 2-furanoxy methyl ketone (Electrospray-MS m/z 514 [MH + ])from of N-benzoyl-L-valyl-L-alanyl-L-norleucine bromomethyl ketone and 2-furan carboxylic acid.
  • N-Benzoyl-L-valyl-L-alanyl-L-norleucine 2,6-dichlorophenylacyloxy methyl ketone (Electrospray-MS m/z 606 [MH + ], 608 [MH + ]) from of N-benzoyl-L-valyl-L-alanyl-L-norleucine bromomethyl ketone and 2,6-dichlorophenylacetic acid.
  • Standard Prep. HPLC conditions were as follows: C4 preparative HPLC system (Vydac, 22 ⁇ 250 mm) eluting at 10 ml per minute a gradient of 5-95% (90% acetonitrile (0.1% TFA)) over 30 minutes.
  • reaction mixture was washed 2 ⁇ 2 ml 0.5 M citric acid solution, 1 ⁇ 2 ml water, 1 ⁇ 2 ml saturated sodium bicarbonate solution, 1 ⁇ 2 ml water, dried with magnesium sulphate and evaporated to dryness to give the title compound.
  • Ethyl diethylphosphorylmethanesulfonate (36 ml, ⁇ 138 mmol) was dissolved in dry THF (5 ml) and then cooled to 0° C. under an atmosphere of nitrogen.
  • Sodium hydride (8 mg of 60% dispersion in oil, 200 mmol) was added and the mixture stirred for 15 mins (effervescence).
  • the aldehyde t Boc-Val-Ala-Leu-CHO 50 mg, 129 mmol was added to the resulting solution and the mixture stirred for 30 mins. The reaction was quenched by addition of dilute hydrochloric acid (0.1 M), followed by extraction with ethyl acetate ( ⁇ 3).
  • Another suitable bond in a compound of general formula (I), (II) or (III) according to the invention is an ester bond to form a depsipeptide.
  • the incorporation of depsipeptide substrates aided the identification of substrates for low reactivity viral proteases, such as viral serine proteases.
  • the method described also facilitates the rapid development of a screening assay for novel protease inhibitors.
  • the most potent fluorogenic substrate discovered by library screening can subsequently be used for the detection of inhibitors of the particular proteolytic enzyme under scrutiny.
  • the invention provides self-decoding, combinatorial fluorogenic libraries, and it will greatly facilitate the design and invention of novel protease inhibitors because:
  • the peptides of the library may have increased aqueous solubility in comparison to peptides containing similar and other fluorogenic and quencher groups.
  • peptides are stable to contaminating exopeptidases.
  • DMF dimethylformamide
  • Fmoc fluorenylmethoxycarbonyl
  • HPLC high performance liquid chromatography
  • Pfp pentafluorophenyl, tBoc, tert-butoxycarbonyl
  • tBu tert-butyl
  • TFA trifluoroacetic acid
  • Pmc pentamethyl chroman
  • Pbf pentamethylbenzofuran
  • TBTU 2-(1H-Benztrotriazole-1-yl)-1,1,1,3,3-tetramethyluronium tetrafluoroborate
  • Trt Trityl.
  • p.Aba 4-aminobenzoyl; Aib, Aminoisobutyric acid; Bip, Biphenylalanine; nBu, n-Butyl; Bz, Benzoyl; Cmpi, Carboxymethylpiperazine; Deg, Diethylglycine; DIPEA, N,N-Diisopropyl-ethylamine; HATU, 0-(7-azabezotriazol-1-yl)-1,1,3,3-tetramethyluronium hexafluorophosphate; HOAT, 1-hydroxy-7-azabenzotriazole; Naph, Naphthylalanine; 3.Pyr, 3-pyridiylalanine; Tyr(NO,), 3-nitro-tyrosine.

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Abstract

The present invention relates to the field of compounds which are substrates or inhibitors of proteolytic enzymes and to apparatus and methods for identifying substrates or inhibitors for proteolytic enzymes. We have devised a combinatorial method for the rapid identification of binding motifs which will greatly expedite the synthesis of inhibitors of a variety of proteolytic enzymes such as aspartyl proteases, serine proteases, metallo proteases and cysteinyl proteases.

Description

  • The present invention relates to the field of compounds which are substrates or inhibitors of proteolytic enzymes and to apparatus and methods for identifying substrates or inhibitors for proteolytic enzymes. [0001]
  • Many therapeutically useful drugs act as enzyme inhibitors. In particular, proteolytic enzyme inhibitors have been the focus of much attention in the pharmaceutical industry, because they play a variety of roles in a multitude of biological systems. Their proteolytic activities are related to processes ranging from cell invasion associated with metastatic cancer to evasion of an immune response, as seen in certain is parasitic organisms; from nutrition to intracellular signalling to the site-specific proteolysis of viral proteases and eukaryotic hormone-processing enzymes. However, the traditional random screening methods for the identification of lead molecules as inhibitors of proteolytic enzymes are often laborious and time-consuming. Therefore new and efficient methods which can accelerate the drug discovery process are greatly in demand. [0002]
  • We consider that proteases contain an active catalytic site which tends to become increasingly activated as the recognition pockets[0003] 1 (S1 and S2 etc) and (S1′ and S2′ etc) become better occupied. Therefore, it is important that those parts (P1 and P2 etc) (P1′ and P2′ etc) of the inhibitor that best fit into these pockets are identified as quickly as possible in order to design novel protease inhibitors. Therefore, we have devised a combinatorial method for the rapid identification of these binding motifs which will greatly expedite the synthesis of inhibitors of a variety of proteolytic enzymes such as aspartyl proteases, serine proteases, metallo proteases and cysteinyl proteases.
  • Proteases of interest include (but are not limited to): [0004]
  • 1. Aspartyl proteases, such as renin, HIV, cathepsin D and cathespin E etc. [0005]
  • 2. Metalloproteases, such as ECE, gelatinase A and B, collagenases, stromolysins etc. [0006]
  • 3. Cysteinyl proteases, such as apopain, ICI, DerPI, cathepsin B, cathepsin K etc. [0007]
  • 4. Serine proteases, such as thrombin, factor VIIa, factor Xa, elastase, trypsin. [0008]
  • 5. Threonyl proteases, such as proteasome S. [0009]
  • The use of a fluorescence resonance energy transfer (FRET) substrate for the analysis of proteolytic enzyme specificity was first published by Carmel.[0010] 2 Since then many different quenched fluorogenic substrates for measuring enzyme inhibition have been described in the literature.4-11 These substrates contain a fluorophore, F, in a P position (vide supra), which is quenched by another group, Q, present in a P position (vide supra) and separated from F by the scissile bond. The advantage of the positioning of these residues, F and Q, is that cleavage of a peptide bond occurs between the two natural residues and, therefore, represents a more natural hydrolytic event rather than the cleavage and release of a C-terminal chromophore.
  • For example, Bratovanova and Petkov[0011] 12 have synthesised fluorogenic substrates from peptide 4-nitroanilides. N-acylation of peptide 4-nitroanilides with the aminobenzoyl (ABz) group yielded substrates that are internally quenched by the presence of the 4-nitroanilide moiety. Upon hydrolysis of the aminoacyl-4-nitroanilide bond, the highly fluorescent N-ABz group is released attached either to an amino acid or peptide.
  • Immobilised libraries, where substrates are attached to a polymer or biopolymer support, have also been used for mapping protease binding sites.[0012] 13 Singh et al. reported recently that enzymatic substrate activity of 38 selected octapeptides attached via a linker to controlled pore glass is predictive of the same activity of similar peptides in solution. However, these results are preliminary and only for a specific example. Therefore, it is not clear whether immobilised substrates attached to polymers can reliably replace soluble substrates in mapping the hindered protease binding sites, especially since the hydrophilic or lipophilic nature of the polymer and the size of the interstices within the polymer are bound to influence the reaction between the enzyme and its substrates.
  • Mixtures of internally quenched, fluorogenic substrates have also recently been described in which the quencher group, Q, is 2,4-dinitrophenyl (Dnp) and is attached to the P side of the scissile bond, while the fluorogenic group, is N-methyl anthranilic acid (Nma) and is attached to the P′ side.[0013] 14
  • Examples of other Donor-Acceptor Chromophore Pairs that have been applied to Biological Systems are shown in Table 1. [0014]
    TABLE 1
    Donor-Acceptor Chromophore Pairs That Have Been Applied To
    Biological Samples
    Donor Acceptor
    Naphthalene Dansyl
    IANBD DDPM
    IAEDANS DDPM
    DNSM LY
    IAEDANS IANBD
    E-A F2DNB
    Pyrene Bimane
    ANAI IPM
    IAANS IAF
    ε-A F2DPS
    ε-A DDPM
    IAEDANS TNP
    MNA DACM
    PM NBD
    FITC TNP-ATP
    DANZ DABM
    NCP CPM
    NAA DNP
    LY TNP-ATP
    IAF diI—C18
    IAF TMR
    FMA FMA
    PM DMAMS
    mBBR FITC
    mBBR DABM
    ε-A NBD
    Pyrene Coumarin
    IPM FNAI
    IAEDANS DABM
    IAEDANS TNP-ATP
    ε-A IANBD
    NBD SRH
    ISA TNP
    Dansyl ODR
    DANZ IAF
    FNAI EITC
    NBD LRH
    IAF EIA
    FITC ENAI
    Proflavin ETSC
    CPM TNP-ATP
    IAEDANS IAF
    CPM Fluorescein
    IAEDANS FITC
    FITC TMR
    IAF TMR
    CF TR
    CPM FTS
    ε-A TNP-ATP
    CPM FM
    LY EM
    FITC EITC
    IAEDANS DiO—C14
    IAF ErITC
    FITC EM
    FITC ETSC
    FITC ErITC
    BPE CY5
  • ANAI, 2-anthracene N-acetylimidazole; BPE, B-phycoerythrin; CF, carboxyfluorescein succinimidyl ester; CPM, 7-doethylamino-3-(4′maleimidylphenyl)-4-methylcoumarin; CY5, carboxymethylindocyanine-N-hydroxysuccinimidyl ester, diI-C[0015] 18, 1,1′-dioctadecyl-3,3,3′3′-tetramethyl-indocarbocyanine; DiO-C14, 3,3′-ditetradecyloxacarbocyanine; DABM, 4-dimethylaniniphenylazo-phenyl-4′-maleimide; DACM, (7-(dimethylamino)coumarin-4-yl)-acetyl; DANZ, dansylaziridine; DDPM, N-(4-dimethylamino-3-5-dinitrophenyl)maleimide; DACM, di-methylamino-4-maleimidostilbene; DMSM, N-(2,5-dimethoxystiben-4-yl) maleimide; DNP, 2,4-dinitrophenyl; ε-A, I,N6-ethenoadenosine; EIA, 5-(iodoacetetamido)eosin; EITC, eosin-5-isothiocyanate; ENAI, eosin N-acetylimidazole; EM, eosin maleimide; ErITC, erythrosin-5′-isothiocyanate; ETSC, eosin thiosemicarbazide; F2DPB, 1,5-difluoro-2,4′dinitrobenzene; F2DPS, 4,4′-difluro-3,3′dinitropheylsulphone; FITC, fluorescein N-acetylimidazole; FTS, fluorescein thiosemicarbazide; IAANS; 2-((4′-iodoacetamido)anilino)naphthalene-6-sulphonic acid; IAEDANS, 5-(2-((iodoacetyl)amino)ethylamino)-naphthlene-1-sulphonic acid; IAF, 5-iodoacetamidofluorescein; IANBD, N-((2-(iodoacetoxy)ethyl)-N-methyl)amino-7-nitrobenz-2-oxa1,3,diazole; IPM, 3(4-isothiocyanatophenyl)7-diethyl-4-methylcoumarin; ISA, 4-(iodoacetamido)salicylic acid; LRH, lissaminerho-2,1,3-benzoxadiazol-4-yl; NCP, N-cyclohexyl-N′-(1-pyrenyl)carbodiimide; ODR, octadecylrhodamine; PM, N-(1-pyrene)-maleimide; SRH sulphurhodamine; TMR, tetramethylrhodamine; TNP, trinitrophenyl; TR, Texas red.
  • from: Wu, P. and Brand, L. 1994. Anal. Biochem. 218, 1-13. [0016]
  • The specificity of soluble peptide libraries have been determined.[0017] 15-16 Berman et al. described16 an HPLC mass spectrometry technique in which 6 mixtures of 128 peptides were synthesised which were N-terminally labelled with the Dnp group in order to allow UV monitoring on the HPLC. The disadvantage of this approach is that each assay mixture has to be individually analysed, because no fluorogenic substrate is revealed, and that the effective concentration of each separate component is limited by the size of the mixture because of overall solubility factors. Drevin et al.17 have suggested the use of individually synthesised fluorogenic substrates for the determination of enzyme activity using a chromophore which chelates lanthamide ions. Garmann and Phillips have suggested the use of FRET substrates in which the fluorogenic and quencher moieties are attached via thiol or amino functional groups after the peptide has been synthesised, but this has the disadvantage that they are not in library form and that these functional amino and thiol groups need to be selectively revealed after the peptide has been synthesised. Wang et al. have suggested the use of the EDANS and DABCYL fluorescor and quencher pairing for the individual synthesis of substrates for proteolytic enzymes.
  • The above methods which have used FRET techniques for the mapping of the active site around a specific protease suffer from one or more of the following disadvantages: [0018]
  • i. because of general aqueous insolubility they do not produce mixtures of compounds in a form suitable for high throughput screening in aqueous solution. [0019]
  • ii. the derivatised compounds cannot be prepared in combinatorial library form using solid phase techniques. [0020]
  • iii. the mixtures which have been used[0021] 8,9 were not self-decoding, and needed time-consuming deconvolutive resynthesis for identification of the active molecules.
  • DESCRIPTION OF THE DRAWINGS
  • FIGS. [0022] 1 to 14 inclusive exemplify component distributions in the plates of a library matrix;
  • FIG. 15 illustrates a reaction scheme for production of compound number 4: Boc-Val-Ala-Leu-H wherein [0023]
  • i. isobutylchloroformate, N-methylmorpholine, then N,O-dimethylhydroxylamine HCl, THF. [0024]
  • ii. HCl, dioxan. iii. isobutylchloroformate, N-methylmorphline, then Soc-Ala-OH, THF. [0025]
  • iv. HCl, dioxan. V. Boc-Val-Osuc, N-methylmorpholine, DMF. Vi. LAH; [0026]
  • FIG. 16 illustrates a reaction scheme for production of active inhibitors of Der P[0027] 1.
  • BRIEF DESCRIPTIONS OF THE INVENTION
  • The present invention relates to the field of: [0028]
  • i. Compounds which are substrates or inhibitors of proteolytic enzymes. [0029]
  • ii. Apparatus and methods which provide the rapid generation of structure-activity relationships using auto-deconvoluting combinatorial libraries, which facilitate the invention of novel inhibitors of proteolytic enzymes. [0030]
  • iii. Apparatus and methods which provide the detection and measurement of proteolytic enzyme activity using combinatorial FRET (fluorescence resonance energy transfer) libraries of molecules. [0031]
  • iv. Apparatus and methods which provide the establishment of biological assays for proteolytic enzymes through the rapid discovery of highly active substrates for proteolytic enzymes. [0032]
  • We describe herein apparatus and methods which can be used for the rapid generation of structure-activity relationship (SAR) data and, therefore, the characterisation of the binding motif of any protease, and which will, therefore, facilitate: [0033]
  • i. the development of a sensitive enzyme inhibition assay by using the best compound in the library as the fluorogenic substrate for the proteolytic enzyme under scrutiny. [0034]
  • ii. the invention of novel compounds which are proteolytic enzyme inhibitors by rapid characterisation of the best binding motif. [0035]
  • iii. computer aided drug design to design potent inhibitors using known methodology, and also in prioritising which pre-synthesised compounds in the in-house and commercially available databases to assay. [0036]
  • In a first aspect the invention provides novel compounds represented by the formula A-B-C-D-nE-F [I] in which; [0037]
  • A represents a fluorescor internally quenched by F; [0038]
  • B, C, D, and E represent groups such that the scissile bond between any two of these groups is a suitable bond; [0039]
  • F represents a quencher capable of internally quenching the fluorescor A; and [0040]
  • n represents an integer between 1 and 4 inclusive. [0041]
  • In some embodiments the suitable bond is an unsubstituted amide bond (see Example 1); in other embodiments the suitable bond is an ester bond (see Example 2). [0042]
  • In preferred embodiments B, C, D, E are amino acids or hydroxy acids. That is a molecule with an amine or hydroxy terminus and a carboxylic acid terminus. The amine/hydroxy group may be positioned on the same carbon atom or separated by a number of atoms and atom types. [0043]
  • The molecules may be cyclic or alicyclic. They may be linear or cyclic on the same structure [0044]
    Figure US20030092067A1-20030515-C00001
  • or BCDE can be on a central scaffold (linear or cyclic) [0045]
    Figure US20030092067A1-20030515-C00002
  • or one of the residues can be the backbone [0046]
    Figure US20030092067A1-20030515-C00003
  • Where the symbol -B-C-D-E- or -B-C-D-nE- is used herein, it is to be understood to include all of these linear and cyclic variants within its definition. [0047]
  • At least one but not all the bonds between B, C, D, E need to be scissile. Non scissile bonds may include sulphonamide, urea, aminomethylene. [0048]
  • Several non-limiting examples of “scaffold” molecules are shown in Table 2, in which substituents R[0049] 1-R4 correspond to possible variable groups B, C, D and E.
  • In a second aspect the invention provides a combinatorial library of FRET compounds comprising a mixture of compounds of formula [I]. [0050]
  • In a third aspect the invention provides for the use of such a combinatorial FRET library in a method which provides rapid generation of structure-activity relationships (SAR) which comprises detection and measurement of proteolytic enzyme activity by carrying out an assay with a library of combinatorial FRET (fluorescence resonance energy transfer) molecules to find a substrate or substrates for the enzyme. According to this method an identified substrate can be synthesised and used in biological assay for proteolytic enzymes. Novel substrates are included in the scope of the invention. [0051]
  • In a forth aspect the invention provides for the use of such a combinatorial FRET library in a method for detection and measurement of proteolytic enzyme activity against compounds of the library. [0052]
  • In a fifth aspect the invention provides a method which comprises the identification of an enzyme inhibitor or inhibitors wherein a FRET compound which has been [0053]
    Figure US20030092067A1-20030515-C00004
  • identified as a substrate is used in an inhibition assay with the enzyme separately against a panel of possible inhibitors. [0054]
  • In a sixth aspect the invention provides a set of compounds which comprises two complementary FRET compound libraries. Such a set will be referred to hereafter as “apparatus” because it allows for the screening or assay method for identifying substrates or inhibitors of proteolytic enzymes. This set of compounds constituting an apparatus is capable of providing an auto-deconvoluting combinatorial library as will be described below. [0055]
  • In a seventh aspect the invention provides a method of identifying and synthesising an inhibitor of a proteolytic enzyme which comprises detection and measurement of proteolytic enzyme activity by carrying out an assay with a library of combinatorial FRET (fluorescence resonance energy transfer) molecules, deconvoluting the library to find a substrate or substrates for the enzyme and synthesis of an inhibitor based on the substrate or substrates. The direct product of this method is one or more novel proteolytic enzyme inhibitors. [0056]
  • In an eighth aspect the invention provides an inhibition assay which uses a FRET molecule, which has been identified as a substrate for the enzyme, wherein the molecule is assayed with the enzyme separately against a panel of possible inhibitors. [0057]
  • In a ninth aspect the invention provides a complementary pair of compound libraries L[0058] 1 and L2 which constitute a set containing compounds of formula:
  • Aa-Bb-Cc-Dd-n(Ee)-Ff-Gg
  • giving a×b×c×d×e×f×g=Mn compounds in each library, there being a predetermined number (P[0059] 1, P2) of mixtures each consisting of a predetermined number (Q1, Q2) of individual identifiable compounds in each library, wherein both L1 and L2 contain the same Mn compounds, but wherein any two compounds which are found together in one mixture of Q1 compounds of L1 are not found together in any one of the P2 mixtures of L2.
  • In a tenth aspect the invention provides a method of screening for enzymic activity using the libraries L[0060] 1, L2 is described above in which the P1 mixtures of L1 and the P2 mixtures of L2 are each placed separately into individual wells of well plates, the well plates having wells arranged in a format adapted to allow deduction of a unique active compound formula from the presence of activity in one well of L1 and one well of L2.
  • The apparatus of the invention preferably comprises two complementary compound libraries, L[0061] 1 and L2, each containing n×1600 compounds of the invention, of the type A-B-1-10-C1-10-D1-8-n(E1-2)-F-G [II], in which:
  • A=a fluorescor internally quenched by F, preferably an unsubstituted or substituted anthranilic acid derivative, connected by an amide bond to B [0062]
  • B, C, D, E, are natural or unnatural amino acid residues connected together by suitable bonds, although B, C, D and E can be any set of groups, provided that the scissile bond between D-E is an unsubstituted bond. [0063]
  • F=a quencher capable of internally quenching the fluorescor A, preferably an unsubstituted or substituted 3-nitrotyrosine derivative. [0064]
  • G=optionally present and is a hydrophilic moiety, preferably an aspartyl amide moiety. If present, G advantageously ensures that all compounds in the library are imparted with aqueous solubility. Also, G should not be a substrate for any type of enzyme. [0065]
  • n=any integer between 1 and 4 inclusive. [0066]
  • In an alternative, the scissile bond could be between B-C is or C-D. [0067]
  • (Note that A and F herein correspond generally and respectively to moieties F and Q of the prior art referred to above). [0068]
  • The numbers represented in subscript following residues B, C, D and E refer to the number of possibilities from which those residues are selected. Thus, by way of illustrative example, A-B[0069] 1-5-C-D-E1-2-F-G represents a mixture of the following ten compounds:
  • A-B[0070] 1-C-D-E1-F-G
  • A-B[0071] 2-C-D-E1-F-G
  • A-B[0072] 1-C-D-E1-F-G
  • A-B[0073] 4-C-D-E1-F-G
  • A-B[0074] 1-C-D-E1-F-G
  • A-B[0075] 1-C-D-E2-F-G
  • A-B[0076] 1-C-D-E2-F-G
  • A-B[0077] 1-C-D-E2-F-G
  • A-B[0078] 1-C-D-E2-F-G
  • A-B[0079] 1-C-D-E2-F-G
  • The general combinatorial formula for each library can be expressed as: [0080]
  • A1-B10-C10-D8-n(E2)-F1-G1  [III]
  • providing 1×10×10×8×n×2×1×1=1600n compounds. [0081]
  • Both compound libraries, L[0082] 1 and L2, of the above type are synthesized using solid phase techniques using the Multipin approach24 such that each library contains 1600n compounds as 80n mixtures of 20 distinct, identifiable compounds. These 20 component mixtures are then placed separately into each of 80 wells of a 96 well plate (the other two lanes are used for control experiments) and then screened against a known quantity of the protease.
  • Thus it is an important part of the invention that regardless of the number of compounds contained in the two libraries L[0083] 1 and L2 (e.g. in the preferred embodiment: 1600n, where n=any integer between 1 and 4) the libraries themselves are complementary and amenable to deconvolution without recourse to resynthesis. It is also an important part of the invention that the library matrix has been especially formatted so that the most important site pairings P2 and P1 for proteolytic enzymes can be identified immediately without recourse to resynthesis. Those compounds of the type A-B-C-D-E-F-G that are the better substrates for the protease will be cleaved, and can be readily identified because the fluorescor, A, will be cleaved from its nearby quencher F, in a time dependent manner which can be easily quantified. The fluorescent quenching by F of A only occurs when the two are in nearby proximity, normally within 30 angstrom units. Hence cleavage of a scissile bond (e.g. the scissile bond D-E) allows F to move further away from A and thus allow A to fluoresce when excited by light of the correct wavelength.
  • 1. In this manner the most active compound can be rapidly identified without the need for further resynthesis and deconvolution. Moreover, the wells that show the most rapid development of fluorescence can also be analysed by mass spectrometry, since by comparison with the original mixture, the identity of the most efficient substrate can be found by its disappearance into its two component parts, e.g A-B-C-D and E-F-G. [0084]
  • Hence the problem of library deconvolution can be overcome and the most active substrate for the enzyme can be rapidly identified. [0085]
  • In addition, after the initial treatment of the proteolytic enzyme with the library mixtures, L[0086] 1 and L2, the residual enzymatic activity in each well can be quantified by the addition of the most potent fluorogenic substrate for the enzyme, S1, which is found in the 16×n compound library. Because of the nature of the library design this can be quickly prepared and purified. If there is no appearance of increased fluorescence with the known substrate, S1, then the presence of an enzyme inhibitor can be inferred, which again can be quickly identified without the need for resynthesis.
  • The general description of the library layout will now be described with reference to FIGS. [0087] 1 to 14.
  • For example, when n=1 and the library contains 1600 compounds, in the first column of the first row (A[0088] 1) (FIG. 1) in the first plate (P1) of the library L1, (hereinafter designated as location A1,P1,L1) there will be one C component, C1, one D component, D1, the ten B components and the two E components (E1 and E2) (FIG. 2). In the tenth column of the first row (A10) in the first plate (P1) of the library L1, (hereinafter designated as location A10,P1,L1) there will be one C component, C10, one D component, D1, the ten B components and the two E components (E1 and E2). In the tenth column of the eighth row (H10) in the first plate (P1) of the library L1, (hereinafter designated as location H10,P1,L1) there will be one C component, C10, one D component, D8, the ten B components and the two E components (E1 and E2). Hence all 1600 components are present in the one plate, because the 80 wells each contain 20 components.
  • A second complementary library is synthesised as follows (FIG. 3). In the first column of the first row (A[0089] 1) of the first plate (P1) of the library, L2, (hereinafter designated as location A1,P1,L2), there will be ten C components, two D components (D1 and D2), one B component, B1, and one E component, E1. In the tenth column of the first row (A10) of the first plate (P1) of the library, L2, (hereinafter designated as location A10,P1,L2), there will be ten C components, two D components (D1 and D2), one B component, B10, and one E component, E1. In the first column of the second row (B1) of the first plate (P1) of the library, L2, (hereinafter designated as location B1,P1,L2), there will be ten C components, two D components (D1 and D2), one B component, B1, and one E component, E2. In the tenth column of the second row (B10) of the first plate (P1) of the library, L2, (B10,P1,L2) there will be ten C components, two D components (D1 and D2), one B component, B10, and one E component, E2. Hence only the first two rows are used to accommodate 400 compounds in total.
  • In the first column of the first row (A[0090] 1) of the second plate (P2) of the library, L2, (hereinafter designated as location A1,P2,L2), there will be ten C components, two D components (D3 and D4), one B component, B1, and one E component, E1 (FIG. 4). In the tenth column of the first row (A10) of the second plate (P2) of the library, L2, (hereinafter designated as location A10,P2,L2), there will be ten C components, two D components (D3 and D4), one B component, B10, and one E component, E1. In the first column of the second row (B1) of the second plate (P2) of the library, L2, (hereinafter designated as location B1,P2,L2), there will be ten C components, two D components (D3 and D4), one B component, B1, and one E component, E2. In the tenth column of the second row (B10) of the second plate (P2) of the library, L2, (B10,P2,L2), there will be ten C components, two D components (D, and D4), one B component, B10, and one E component, E2. Hence only the first two rows are used to accommodate 400 compounds in-total.
  • In the first column of the first row (A[0091] 1) of the third plate (P3) of the library, L2, (hereinafter designated as location A1,P3,L2), there will be ten C components, two D components (D5 and D6), one B component, B1, and one E component, E1 (FIG. 5). In the tenth column of the first row (A10) of the third plate (P3) of the library, L2, (hereinafter designated as location A10,P3,L2), there will be ten C components, two D components (D5 and D6), one B component, B10, and one E component, E1. In the first column of the second row (B1) of the third plate (P3) of the library, L2, (hereinafter designated as location B1,P3,L2), there will be ten C components, two D components (D5 and D6), one B component, B1, and one E component, E2. In the tenth column of the second row (B10) of the third plate (P3) of the library, L2, (B10,P3,L2), there will be ten C components, two D components (D5 and D6), one B component, B10, and one E component, E2. Hence only the first two rows are used to accommodate 400 compounds in total.
  • In the first column of the first row (A[0092] 1) of the fourth plate (P4) of the library, L2, (hereinafter designated as location A1,P4,L2), there will be ten C components, two D components (D7 and D8), one B component, B1, and one E component, E2 (FIG. 6). In the tenth column of the first row (A10) of the fourth plate (P4) of the library, L2, (hereinafter designated as location A10,P4,L2), there will be ten C components, two D components (D7 and D8), one B component, B10, and one E component, E1. In the first column of the second row (B1) of the fourth plate (P4) of the library, L2, (hereinafter designated as location B1,P4,L2), there will be ten C components, two D components (D7 and D8), one B component, B1, and one E component, E2. In the tenth column of the second row (B10) of the fourth plate (P4) of the library, L2, (B10,P4,L2), there will be ten C components, two D components (D7 and D8), one B component, B10, and one E component, E2. Hence only the first two rows are used to accommodate 400 compounds in total.
  • In this fashion two complementary libraries, L[0093] 1 and L2 are prepared. In library, L1, each of the 80 of wells contains a mixture of 20 components providing 1600 compounds for screening. In library, L2, four plates are used in which only the first two rows are employed, providing 20 wells of 20 components per well per plate, and furnishing the same 1600 compounds as are present in library L1, but in a format in which no two compounds found together in library, L1, will be found together in library, L2.
  • Thus it is an important part of the invention that the compounds contained in the two libraries L[0094] 1 and L2 are themselves complementary, in that any two compounds which are found together in a 20 component mixture in the same location (e.g. A1P1L1) in library L1, are not found together in any of the 20 component mixtures in any location of the library L2.
  • Thus, for example, with reference to the primary library P[0095] 1 L1 of FIG. 2 and the secondary libraries P1 L2, P2 L2, P3 L2 and P4 L2 of FIGS. 3-6 it is possible to deconvolute an examplary sequence:
  • -B[0096] 2-C3-D4-E1-
  • If this sequence is a substrate fluorescence will occur in P[0097] 1 L1 at C3D4. This gives the information that the substrate is
  • -?-C[0098] 3-D4-?-
  • If fluorescence occurs in P[0099] 2 L2 at B2E1 it indicates a substrate
  • -B[0100] 2-?-?-E1-
  • The confirmation of the substrate as [0101]
  • -B[0102] 2-C3-D4-E1-
  • should be provided by non-fluorescence of P[0103] 1 L2, P3 L2 and P4 L2 which all contain -B2-C3-X-E1- where X is not D4.
  • In practice it is likely that more than one sequence will result in a substrate. Information as to which positions B-C-D-E- are sensitive to change (i.e. require a specific group) and which are insensitive (i.e. can tolerate more than one choice of group) in the context of the whole sequence gives valuable SAR data which can be used to model and/or synthesise related compounds. [0104]
  • In analogous examples, where separately n=2, 3 or 4, extra plates are constructed in library L[0105] 1 format to accommodate the component pairs E3 and E4 (n=2), E5 and E6 (n=3), and E7 and E8 (n=4), respectively. For the respective deconvolution libraries of the type, L2, the respective rows in the plates P1, P2, P3, and P4, are increasingly filled with the paired components D1 and D2, D3 and D4, and D5 and D6, and D7 and D8, respectively.
  • For example, when n=3, and the library contains 4800 compounds, in the first column of the first row (A[0106] 1) in the first plate (P1) of the library L1, (hereinafter designated as location A1,P1,L1) there will be one C component, C1, one D component, D1, the ten B components and the two E components (E1 and E2). In the tenth column of the first row (A10) in the first plate (P1) of the library L1, (hereinafter designated as location A10,P1,L1) there will be one C component, C10, one D component, D1, the ten B components and the two E components (E1 and E2) In the tenth column of the eighth row (H10) in the first plate (P1) of the library L1, (hereinafter designated as location H10,P1,L1) there will be one C component, C10, one D component, D8, the ten B components and the two E components (E1 and E2). Hence 1600 components are present in the one plate, because the 80 wells each contain 20 components.
  • In the first column of the first row (A[0107] 1) in the second plate (P2) of the library L1, (hereinafter designated as location A1,P2,L1) there will be one C component, C1, one D component, D1, the ten B components and the two E components (E3 and E4). In the tenth column of the first row (A10) in the second plate (P2) of the library L1, (hereinafter designated as location A10,P2,L1) there will be one C component, C10, one D component, D1, the ten B components and the two E components (E3 and E4). In the tenth column of the eighth row (H10) in the second plate (P2) of the library L1, (hereinafter designated as location H10,P1,L1) there will be one C component, C10, one D component, D8, the ten B components and the two E components (E3 and E4). Hence 1600 components are present in the one plate, because the 80 wells each contain 20 components.
  • In the first column of the first row (A[0108] 1) in the third plate (P3) of the library L1, (hereinafter designated as location A1,P3,L1) there will be one C component, C1, one is D component, D1, the ten B components and the two E components (E5 and E6). In the tenth column of the first row (A10) in the third plate (P3) of the library L1, (hereinafter designated as location A10,P3,L1) there will be one C component, C10, one D component, D1, the ten B components and the two E components (E5 and E6). In the tenth column of the eighth row (H10) in the third plate (P3) of the library L1, (hereinafter designated as location H10,P3,L1) there will be one C component, C10, one C component, C8, the ten B components and the two E components (E5 and E6). Hence 1600 components are present in the one plate, because the 80 wells each contain 20 components. In total the three plate, P1, P2 and P3, contain 1600 compounds/plate 4800 compounds in total.
  • For example, when n=4, and the library contains 6400 compounds, in the first column of the first row (A[0109] 1) in the first plate (P1) of the library L1, (hereinafter designated as location A1,P1,L1) there will be one C component, C1, one D component, D1, the ten B components and the two E components (E1 and E2) (FIG. 7). In the tenth column of the first row (A10) in the first plate (P1) of the library L1, (hereinafter designated as location A10,P1,L1) there will be one C component, C10, one D component, D1, the ten B components and the two E components (E1 and E2). In the tenth column of the eighth row (H10) in the first plate (P1) of the library L1, (hereinafter designated as location H10,P1,L1) there will be one C component, C10, one D component, D8, the ten B components and the two E components (E1 and E2). Hence all 1600 components are present in the one plate, because the 80 wells each contain 20 components.
  • In the first column of the first row (A[0110] 1) in the second plate (P2) of the library L1, (hereinafter designated as location A1,P2,L1) there will be one C component, C1, one D component, D1, the ten B components and the two E components (E3 and E4) (FIG. 8). In the tenth column of the first row (A10) in the second plate (P2) of the library L1, (hereinafter designated as location A10,P2,L1) there will be one C component, C10, one D component, D1, the ten B components and the two E components (E3 and E4). In the tenth column of the eighth row (H10) in the second plate (P2) of the library L1, (hereinafter designated as location H10,P2,L1) there will be one C component, C10, one D component, D8, the ten B components and the two E components (E3 and E4).
  • In the first column of the first row (A[0111] 1) in the third plate (P3) of the library L1, (hereinafter designated as location A1,P3,L1) there will be one C component, C1, one D component, D1, the ten B components and the two E components (E5 and E6) (FIG. 9). In the tenth column of the first row (A10) in the third plate (P3) of the library L1, (hereinafter designated as location A10,P3,L1) there will be one C component, C10, one D component, D1, the ten B components and the two E components (E5 and E6). In the tenth column of the eighth row (H10) in the third plate (P3) of the library L1, (hereinafter designated as location H10,P3,L1) there will be one C component, C10, one D component, D8, the ten B components and the two E components (E5 and E6).
  • In the first column of the first row (A[0112] 1) in the fourth plate (P4) of the library L1, (hereinafter designated as location A1,P4,L1) there will be one C component, C1, one D component, D1, the ten B components and the two E components (E7 and E8) (FIG. 10). Likewise, in the tenth column of the first row (A10) in the fourth plate (P4) of the library L1, (hereinafter designated as location A10,P4,L1) there will be one C component, C10, one D component, D1, the ten B components and the two E components (E7 and E8). In the tenth column of the eighth row (H10) in the fourth plate (P4) of the library L1, (hereinafter designated as location H10,P4,L1) there will be one C component, C10, one D component, D8, the ten B components and the two E components (E7 and E8)
  • A second complementary library is synthesised as follows. In the first column of the first row (A[0113] 1) of the first plate (P1) of the library, L2, (hereinafter designated as location A1,P1,L2), there will be ten C components, two D components (D1 and D2), one B component, B1, and one E component, E1 (FIG. 11). In the tenth column of the first row (A10) of the first plate (P1) of the library, L2, (hereinafter designated as location A10,P1,L2), there will be the ten C components, two D components (D1 and D2), one B component, B10, and one E component, E1. In the first column of the eighth row (H1) of the first plate (P1) of the library, L2, (hereinafter designated as location H1,P1,L2), there will be the ten C components, two D components (D1 and D2), one B component, B1, and one E component, E8. In the tenth column of the eighth row (H10) of the first plate (P1) of the library, L2, (H10,P1,L2) there will be the ten C components, two D components (D1 and D2), one B component, B10, and one E component, E8. Hence the matrix containing all ten columns and all eight rows are used to accommodate 1600 compounds in total.
  • In the first column of the first row (A[0114] 1) of the second plate (P2) of the library, L2, (hereinafter designated as location A1,P2,L2), there will be ten C components, two D components (D3 and D4), one B component, B1, and one E component, E1 (FIG. 12). In the tenth column of the first row (A10) of the second plate (P2) of the library, L2, (hereinafter designated as location A10,P2,L2), there will be ten C components, two D components (D3 and D4), one B component, B10, and one E component, E1. In the first column of the second row (B1) of the second plate (P2) of the library, L2, (hereinafter designated as location B1,P2,L2), there will be ten C components, two D components (D3 and D4), one B component, B1, and one E component, E2. In the tenth column of the eighth row (H10) of the second plate (P2) of the library, L2, (H10,P2,L2), there will be ten C components, two D components (D3 and D4), one B component, B10, and one E component, E8.
  • In the first column of the first row (A[0115] 1) of the third plate (P3) of the library, L2, (hereinafter designated as location A1,P3,L2), there will be ten C components, two D components (D5 and D6), one B component, B1, and one E component, E1 (FIG. 13). In the tenth column of the first row (A10) of the third plate (P3) of the library, L2, (hereinafter designated as location A10,P3,L2), there will be ten C components, two D components (D5 and D6), one B component, B10, and one E component, E1. In the first column of the second row (B1) of the third plate (P3) of the library, L2, (hereinafter designated as location B1,P3,L2), there will be ten C components, two D components (D5 and D6), one B component, B1, and one E component, E2. In the tenth column of the eighth row (H10) of the third plate (P3) of the library, L2, (H10,P3,L2), there will be ten C components, two D components (D5 and D6), one B component, B10, and one E component, E8.
  • In the first column of the first row (A[0116] 1) of the fourth plate (P4) of the library, L2, (hereinafter designated as location A1,P4,L2), there will be ten C components, two D components (D7 and D8), one B component, B1, and one E component, E1 (FIG. 14). In the tenth column of the first row (A10) of the fourth plate (P4) of the library, L2, (hereinafter designated as location A10,P4,L2), there will be ten C components, two D components (D7 and D8), one B component, B10, and one E component, E1. In the first column of the second row (B1) of the fourth plate (P4) of the library, L2, (hereinafter designated as location B1,P4,L2), there will be ten C components, two D components (D7 and D8), one B component, B1, and one E component, E2. In the tenth column of the eighth row (H10) of the fourth plate (P4) of the library, L2, (H10,P4,L2), there will be ten C components, two D components (D7 and D8), one B component, B10, and one E component, E8.
  • It will be apparent to those skilled in the art that the synthesis of two orthogonal sets of mixtures in solution providing two complementary FRET libraries indexed in two dimensions for autodeconvolution does not require the currently preferred arrangement -B[0117] 1-10-C1-10-D1-8-E1-8-.
  • The general concept of two orthogonal sets of mixtures indexed in two dimensions can be applied to various permutations of numbers of wells, plate layout, number of permutations per mixture etc. [0118]
  • A numerical interrelationship can be defined as follows: [0119]
  • General Deconvolution Formulae [0120]
  • -Bb-Cc-Dd-n(Ee)-  (I)
  • 1) Primary and Secondary plates preferably have the same number of compounds per well [X]: otherwise there are two values, having X[0121] p and Xs respectively.
  • 2) The primary library comprises [np] plates. [0122]
  • If Rp.Cp=Rs.Cs, then the number of plates in the secondary library is also [np]. If not, the number of plates in the secondary library [ns] is: [0123] n s = Rp · Cp Rs · Cs · np
    Figure US20030092067A1-20030515-M00001
  • eg. A primary library of np=4, Rp=8, Cp=10 can be set out in an Rs=4, Cs=S secondary library with the number of plates equal to: [0124] : n s = 8 × 10 4 × 5 · np = 16 plates .
    Figure US20030092067A1-20030515-M00002
  • Number of compounds per well [0125]
  • -Bb-Cc-Dd-np(Ee)-  (1)
  • Number of possible combinations [k] is given by: [0126]
  • k=b.c.d.np.e  (2)
  • When number of wells on a plate=[N], number of compounds per well=[α]and number of plates=[np]: [0127]
  • k=X.N.np  (3)
  • However, number of wells [N] is also defined by the number of rows [Rp] and number of columns [Cp]: [0128]
  • N=Rp.Cp  (4)
  • Combining (3) and (4): [0129]
  • k=X.Rp.Cp.np  (5)
  • Combining (2) and (5): [0130]
  • b.c.d.np.e=X.Rp.Cp.np  (6)
  • Cancelling [np] from both sides of the equation: [0131]
  • b.c.d.e=X.Rp.Cp  (7)
  • Two of the variables (e.g. b.c) on the left side of the equation must each be equal in number to the number of columns [Cp], whilst a remaining variable (e.g. d) on the left side must be equal in number to the number of rows [Rp]. So: [0132]
  • [Cp]2.Rp.e=X.Rp.Cp  (8)
  • Cancelling [Cp] and [Rp] from both sides of the equation: [0133]
  • Cp.e=X  (9)
  • where [e] is the number of variants along a fixed row; and [0134]
  • if Rp=Cp, then Rp.e=X. [0135]
  • EXAMPLE
  • for a 10×10×8×8 format over 4 plates: [0136]
  • np.e=8=>e=2 [0137]
  • 10×2=X [0138]
  • X=20. [0139]
  • From an understanding of the general deconvolution formulae shown above, those skilled in the art will readily appreciate that the advantageous results of self-deconvolution according to the invention are obtainable utilising a number of different arrangements of wells, plate layouts, mixtures etc and that such variants on the preferred embodiment illustrated herein are intended to be within the scope of the present invention. [0140]
  • The FRET strategy is based on the synthesis of two orthogonal sets of mixtures in solution. These solutions are each indexed in two dimensions. Thus the data from, for example, a protease scan identifies the most active compounds without the need for decoding or resynthesis. The positional preferences of sub-units (in this case amino acids) are optimised with respect to all other variant positions simultaneously. The synergistic relationship between all four positions is realised and both positive, beneficial and negative, deactivating data are generated. This leads to families (sub-populations) of substrates and their sub-unit preferences. The data can be fed into molecular modelling programs to generate pharmacophoric descriptors that encompass both the desirable features (from the positive data) and indicate undesirable interactions (from the negative data sets). Note that a one dimensional scan only indicates one position at a time as ‘most active’ and does not explore the synergistic relationship between positions. [0141]
  • The invention will now be described by reference to the following examples. [0142]
  • Example 1
  • In this Example the proteolytic enzyme of interest is Der P[0143] 1, which is found in house dust mite faeces. The example illustrates the synthesis of a number of FRET compounds in which the suitable bond is an unsubstituted amide bond, their use as a library for screening for potential is substrates of Der P1, and subsequent identification and synthesis of active inhibitors of the enzyme.
  • Purification of Der pI. [0144]
  • Crude mite extract (-100 mg, SmithKline-Beecham, U.K) was dissolved in SmL Phosphate Buffered Saline (PBS; 50 mM potassium phosphate; pH 7.4 containing 150 mM NaCl Der pI was purified by affinity column chromatography using 4Cl antibody (indoor Biotechnology, Deeside, U.K.) The crude preparation was mixed with −2 mL of affinity resin for 2 h at 4° C. and then washed with 2-3 volumes of PBS. Elution of bound protein was carried out using 5 mM glycine containing 50% (v/v) ethylene glycol. Fractions (2.2 mL) were collected and neutralised with 0.8 mL of 0.2 M sodium phosphate buffer, pH 7.0. The fractions were pooled and dialysed overnight against 4 L PBS followed by a second dialysis against 2 L PBS for 2-3 h. The total protein was concentrated as required by ultrafiltration (MacroSep; Flowgen, U.K.) [0145]
  • Synthesis of Compounds [0146]
  • The compounds were synthesised using the Multipin approach[0147] 25,26 using Fmoc-Rink amide Macro crowns (Chiron Mimotypes Pty., Ltd., 11 Duerdin Street, Clayton Victoria 3168, Australia) with a loading of 7 μMoles.
  • The amino acid residues of each of the compounds were linked using amide bonds in a suitable form. The coupling chemistry employed is similar to that reported in the literature[0148] 27 for fluorenylmethoxycarbonyl protected amino is acids and activated pentafluorophenyl esters, in which the side-chains are protected using acid labile protecting groups known to those skilled in the art, such as Boc- (for the —NH2 of Lysine, —NH2 of anthranilic acid and guanidino of arginine), tBu- (for the —OH groups of serine, threonine and tyrosine), t-Bu for the —COOH group of Aspartic acid and Glutamic acid, Trityl- (for the Amide of Asparagine and Glutamine, and the amine functionality of the Histidine ring.
  • The N-α-fluorenylmethoxycarbonyl protecting group of the coupled residues were cleaved using 20% piperidine in dimethylformamide (DMF) for 30 minutes at 20° C. The coupling reactions for the free acids such as Boc-ABz-OH (Boc-2-aminobenzoic acid), and Fmoc-(3-nitro)tyrosine-OH were accomplished using 10 equivalents of a mixture of the free acid (1 eq.):TBTU (0.98 eq.): HOBt (0.98 eq.): N-methylmorpholine (1.96 eq.) in dimethylformamide (500 μL) as solvent for 5 hours at 20° C. The other amino acids were coupled as their pentafluorophenyl esters[0149] 26 for 2-6 hours.
  • Hence, in order to couple approximately equal ratios of each component in the mixture of the derivatised amino acids as their pentafluorophenyl esters, a solution of a total of 0.98 equivalents (relative to the amino group loading on the crown) of the mixture of amino acid pentafluorophenyl esters:HOBT (1 eq.) in DMF (500 μL) were coupled for 16 hours at 20° C. The pins were then washed well with DMF and then recoupled using the same mixture under the same conditions. A third coupling of 10 equivalents (relative to the amino group loading of the crown) for 2 hours in DMF was performed using this coupling protocol with equimolar mixtures of the derivatised pentafluorophenyl esters of the amino acids in slightly less than 1 equivalent, it is possible to obtain approximately equal amounts of the coupled products to the crown. In this fashion the libraries are constructed with compounds present on each crown. The compounds were cleaved from the crowns directly into the 80 designated wells of the desired 96 well plate. In the cleavage protocol each crown was treated with a mixture (600 μL) containing trifluoroacetic acid (95%), triethylsilane (5%) for 2 hours at 20° C. The crowns were then washed with trifluoroacetic acid (500 μL) and this was then combined with the cleavage solution. [0150]
  • The Fmoc-Rink amide Macro crowns (Chiron Mimotypes Pty., Ltd., 11 Duerdin Street, Clayton Victoria 3168, Australia) at 7 μMol loading per crown, were coupled with a 10 fold excess of a mixture containing L-Fmoc-Asp(O-t-Bu)-OH (leg) using TBTU (0.98 eq) and N-methylmorpholine (1.96 eq.) in the presence of HOBt (0.98 eq.) in DMF at 0.14M concentration. After deblocking of the Fmoc group with 20% piperidine in DMF for 30 minutes and subsequent washing with DMF and then methanol, coupling of the Fmoc-(3-nitro)tyrosine-OH was accomplished using 10 equivalents of a mixture of the Fmoc-(3-nitro)tyrosine-OH (1 eq.):TBTU (0.98 eq.): HOBt (0.98 eq.): N-methylmorpholine (1.96 eq.) in dimethylformamide as solvent at 0.14 M concentration for 5 hours at 20° C. Removal of the Fmoc group (vide infra) was followed by coupling of the mixtures of amino acids in the ratios outlined and under the conditions described (vide infra). [0151]
  • In a particular example the amino acids comprising group B include Ala, Val, Leu, Ser, Asn, Gln, Glu, Lys, Phe, Pro. The amino acids comprising group C include Ala, Val, Leu, Ser, Asn, Gln, Glu, Lys, Phe, Pro. The amino acids comprising group D include Ala, Val, Ile, Leu, Nle, Ser, Glu, Phe. For n=4, the amino acids comprising group E include Ala, Val, Ile, Leu, Nle, Ser, Glu, Phe. Otherwise any selection from the amino acids can be made for n=1, 2, or 3. [0152]
  • The plates containing the combined cleavage solutions and were then evaporated to dryness to yield the component mixtures using a rotary centrifuge (“SPEEDVAC”, Savant Instruments Inc., Farmingdale, N.Y.) at 800 rpm for 1 hour at 20° C. under a reduced pressure of 10[0153] −2 mmHg. Each component was then transferred to the final mother plate using a (50%; 45%: 5%) mixture of acetonitrile:water:acetic acid. The plates were then lyophilised to dryness using at 20° C. under a reduced pressure of 10−2 mmHg, and then stored at −20° C. In this fashion libraries of the type shown in FIGS. 2-14 were prepared.
  • In further detail, the Multipin approach which was employed is described below: [0154]
  • Multipin Synthesis of Potential Substrates of Der pI [0155]
  • The ‘Chiron’ multipin kit consists of a standard 8×12 pin holder containing 96 ‘pin stems’ to which are reversibly attached ‘crowns’. The ‘crowns’ provide a reactive polymer surface upon which a growing peptide is anchored during solid phase peptide synthesis. Each crown (the equivalent of the peptide-resin in standard solid phase synthesis) can be considered to be an independent reactor by performing simultaneous synthesis in [0156] individual 1 mL wells of industry standard 96 well plates. Each well, and thus each crown, can be charged with a unique set of reagents providing unique sequences to each crown. Common steps such as washing or removal of Nα protection can be performed concomitantly.
  • Synthesis is based upon the use of Nα-fluorenylmethyloxycarbonyl (Fmoc) protected amino acids. Side-chains of tri-functional amino acids are protected with acid labile groups such as trityl or tert-butyl. The addition of amino-acid residues to the growing peptide chain, a process termed ‘coupling’ proceeds through the utilisation of pre-formed pentafluorophenyl (pfp) esters or activation of the free acid, using the reagents HBTU or BOP in the presence of tertiary base (NMM) and HOBt as catalyst. [0157]
  • The experimental techniques used are fully documented (Maeji, N.J. Bray, A. M. Valerio, R. M. and Wang, W., [0158] Peptide Research, 8(1), 33-38, 1995 and Valerio, R. M. Bray, A. M. and Maeji, N. J. Int. J. Pept. Prot. Res, 44, 158-165, 1994) and the main steps are briefly as follows.
  • General Methods [0159]
  • Preparation of Multipin Assembly [0160]
  • Whilst wearing standard plastic gloves, Fmoc-Rink Amide derivitized macrocrowns are assembled (simply clipped) onto stems and slotted into the 8×12 stem holder in the desired pattern for synthesis. [0161]
  • Removal of Nα-Fmoc Protection [0162]
  • A 250 mL solvent resistant bath is charged with 200 ml of a 20% piperidine/DMF solution. The multipin assembly is added and deprotection allowed to proceed for 30 minutes. The assembly is then removed and excess solvent removed by brief shaking. The assembly is then washed consecutively with (200 mL each), DMF (5 mins) and MeOH (5 mins, 2 mins, 2 mins) and left to air dry for 15 mins. [0163]
  • Quantitative UV Measurement of Fmoc Chromophore Release [0164]
  • A 1 cm path length UV cell is charged with 1.2 mL of a 20% piperidine/DMF solution and used to zero the absorbance of the UV spectrometer at a wavelength of 290 nm. A UV standard is then prepared consisting of 5.0 mg Fmoc-Asp(OBut)-Pepsyn KA (0.08 mmol/g) in 3.2 mL of a 20% piperidine/DMF solution. This standard gives Abs[0165] 290=0.55-0.65 (at RT). An aliquot of the multipin deprotection solution is then diluted as appropriate to give a theoretical Abs290=0.6, and this value compared with the actual experimentally measured absorbance showing the efficiency of previous coupling reaction.
  • Coupling of Amino-Acid Residues [0166]
  • Whilst the multipin assembly is drying, the appropriate Nα-Fmoc amino acid pfp esters (10 equivalents calculated from the loading of each crown) and HOBt (10 equivalents) required for the particular round of coupling are accurately weighed into suitable containers. Alternatively, the appropriate Nα-Fmoc amino acids (10 equivalents calculated from the loading of each crown), desired coupling agent e.g. HBTU (9.9 equivalents calculated from the loading of each crown) and activation eg HOBt (9.9 equivalents calculated from the loading of each crown), NMM (19.9 equivalents calculated from the loading of each crown) are accurately weighed into suitable containers. [0167]
  • The protected and activated Fmoc amino acid derivatives are then dissolved in DMF (500 μl for each macrocrown, e.g. for 20 macrocrowns, 20×10 eq×7 mmoles of derivative would be dissolved in 10 000 μL DMF). The appropriate derivatives are then dispensed to the appropriate wells ready for commencement of the ‘coupling cycle’. As a standard, coupling reactions are allowed to proceed for 2-6 hours (depending upon nature of coupling e.g. Ala to [0168] Ala 2 hours Val to Leu 6 hours.
  • When coupling Fmoc amino-acid pentafluorophenyl esters, 10 eq of derivative in DMF (400 μl) with bromophenol blue stock solution (100 μl) is used for each macrocrown. This allows monitoring of the progress of the acylation reaction through the disappearance of the deep blue coloration of bromophenol blue in the presence of unreacted amine to a pale yellow upon completion of acylation. [0169]
  • Preparation of Bromophenol Blue Stock Solution [0170]
  • Bromophenol blue (20 mg) is dissolved in DMF (50 mL) and HOBt (10 mg) added. [0171]
  • Washing Following Coupling [0172]
  • If a 20% piperidine/DMF deprotection is to immediately follow the coupling cycle, then the multipin assembly is briefly shaken to remove excess solvent washed consecutively with (200 mL each), MeOH (5 mins) and DMF (50 mins) and deprotected (see above). If the multipin assembly is to be stored, then a full washing cycle consisting brief shaking then consecutive washes with (200 mL each), DMF (5 mins) and MeOH (5 mins, 2 mins, 2 mins) is performed. [0173]
  • Acidolytic Mediated Cleavage of Peptide-Pin Assembly [0174]
  • Acid mediated cleavage protocols are strictly performed in a fume hood. A polystyrene 96 well plate (1 mL/well) is labelled, then the tare weight measured to the nearest mg. Appropriate wells are then charged with a trifluoroacetic acid/triethylsilane (95:5, v/v, 600 μl) cleavage solution, in a pattern corresponding to that of the multipin assembly to be cleaved. [0175]
  • The multipin assembly is added, the entire construct covered in tin foil and left for 2 hrs. The multipin assembly in then added to another polystyrene 96 well plate (1 mL/well) containing trifluoroacetic acid/triethylsilane (95:5, v/v, 600 μl) (as above) for 5 mins. [0176]
  • The cleaved assembly is washed with DMF (200 μL, 5 mins), MeOH (200 μL, 5 mins), the spent crowns removed and discarded, the stems removed and washed by sonication in methanol (1 hr, RT). [0177]
  • Work Up of Cleaved Peptides [0178]
  • The primary polystyrene cleavage plate (2 hr cleavage) and the secondary polystyrene plate (5 min wash) (see above) are then placed in the SpeedVac and the solvents removed (minimum drying rate) for 90 mins. [0179]
  • The contents of the secondary polystyrene plate (see above) are transferred to their corresponding wells on the primary plate using an acetonitrile/water/acetic acid (50:45:5, v/v/v) solution (3×150 μl) and the spent secondary plate discarded. [0180]
  • Analysis of Products [0181]
  • 1.0 μl of each well (see above) is diluted to 400 μl with 0.1% aq TFA and analysed by HPLC-MS. Column Vydac C4 (214TP52, narrowbore, 21×250 mm). Eluents:—Solvent A 0.1% aq trifluoroacetic acid, Solvent B=acetonitrile/10% A. Gradient:—10-90% B in A over 27 mins, 250 ml/min, 215 nm UV detection. The individual substrates described below were prepared by the above methods and shown by HPLC-MS to be>95% with the correct mass. [0182]
  • Final Lyophilisation of Peptides [0183]
  • The primary polystyrene plate (plus the washings from the secondary plate) is covered with tin foil, held to the is plate with an elastic band. A pin prick is placed in the foil directly above each well and the plate placed at −80° C. for 30 mins. The plate is then lyophilised on the ‘Heto freeze drier’ overnight. Where appropriate individual peptides were then weighed and dissolved to 10 mM stock solutions in DMSO prior to biological screening. Alternatively the 20 component mixture is weighed and the peptide/20 component ratio is calculated. [0184]
  • Further coupling of amino acid residues was carried out according to the multipin approach described above. Whilst the multipin assembly was drying, the appropriate Nα-Fmoc amino acids (10 equivalents calculated from the loading of each crown), HATU coupling agent (9.9 equivalents calculated from the loading of each crown), HOAt catalyst (9.9 equivalents calculated from the loading of each crown) and DIPEA (19.9 equivalents calculated from the loading of each crown)were accurately weighed into suitable containers. [0185]
  • The protected Nα-Fmoc amino acids and coupling agents were then dissolved in DMF (500 μl for each macrocrown) and activated by the addition of DIPEA. The appropriate derivatives were then dipensed to their appropriate wells and as standard coupling to each macro crown was allowed to proceed for 2 hours. [0186]
  • When coupling particularly hindered amino acid residues such as N-Methyl, Ca-Methyl or unusual amino acids (whose coupling efficiency is unknown) the coupling reaction was repeated, as standard, for a further 2 hours. [0187]
  • Substrates for Der pI [0188]
  • Using the general techniques described above, the following compounds were prepared and assayed as potential substrates against Der pI purified as described above. [0189]
    Meas-
    ured
    Km
    Peptide [SEQ ID Nos. 1-76] (μM)
    Abz-Val-Ala-Nle-Ser-Tyr (NO2) -Asp-NH2 12
    H-Val-Ala-Nle-Ser-TyrNO2-ASp-NH2 NS
    H-Ala-Nle-Ser-Tyr (NO2)-Asp-NR2 NS
    Ac-Val-Ala-Nie-Ser-Tyr (NO2)-Asp-NH2 NS
    H-Val-Ala-Nle-Ser-Tyr (NO2)-NH2 NS
    H-Ala-Nle-Ser-Tyr (NO2)-ASP-NH2 NS
    Ac-Val-Ala-Nle-Ser-Tyr (NO2)-NH2 NS
    Abz-Val-Ala-Nle-Ser-Tyr (NO2)-NH2 NM
    Abz-Val -Ala-Nle-Ser-NH2 NM
    Abz-Val-Ala-Nle-Ser-Phe-Asp-NH2 NM
    Abz-Val-Ala-Nle-Ser-Tyr-Asp-NH2 NM
    Abz-Val-Ala-Nle-Ser-Ala-Asp-NH2 NM
    Abz-Val-Ala-Nle-Ser-Lys-Asp-NH2 NM
    Abz-Val-Ala-Nle-Ser-eAHA-Asp-NH2 NM
    Abz-Ala-Nle-Ser-Tyr(NO2)-Asp-NH2 NM
    Abz-Nle-Ser-Tyr(NO2)-Asp-NH2 NS
    Bz-Val-Ala-Nle-Ser-Tyr (NO2)-NH2  NMa
    Bz(2-carboxy)-Val-Ala-Nle-Ser-Tyr(NO2)-NH2  NMa
    Chex-Val-Ala-Nle-Ser-Tyr (NO2)-NH2  NMa
    n-Bu-Val-Ala-Nle-Ser-Tyr (NO2)-NH2  NMa
    Piv-Val-Ala-Nle-Ser-Tyr (NO2)-NH2  NMa
    Bz-Val-Ala-Nle-Ser-Tyr (NO2)-NH2  NMa
    Abz-Val-Ala-Lys-Ser-Tyr (NO2)-Asp-NH2 14
    Abz-Val-Ala-Gln-Ser-Tyr(NO2)-Asp-NH2 6
    Abz-Val-Ala-Thr-Ser-Tyr (NO2)-Asp-NH2 6
    Abz-Val-Ala-hLeu-Ser-Tyr (NO2)-Asp-NH2 4
    Abz-Val-Ala-Cha-Ser-Tyr (NO2)-Asp-NH2 5
    Abz-Val-Ala-His-Ser-Tyr (NO2)-Aso-NH2 >20
    Abz-Val-Ala-ACH-Ser-Tyr (NO2)-Asp-NH2 NS
    Abz-Val-Ala-DNle-Ser-Tyr (NO2)-Asp-NH2 NS
    Abz-Val-Ala-3pyr-Ser-Tyr (NO2)-Asp-NH2 10
    Abz-Val-Ala-Hyp-Ser-Tyr (NO2)-Asp-NH2 NS
    Abz-Val-Ala-ACP-Ser-Tyr (NO2)-Asp-NH2 NS
    Abz-Val-Lys-hLeu-Ser-Tyr (NO2)-Asp-NH2 35
    Abz-Val-+E,unl DAla-hLeu-Ser-Tyr (NO2)-Asp-NH2 NS
    Abz-Val-Tic-hLeu-Ser-Tyr (NO2)-Asp-NH2 NS
    Abz-Val-ACH-hLeu-Ser-Tyr (NO2)-Asp-NH2 NS
    Abz-Val-Met(O)-hLeu-Ser-Tyr (NO2)-Asp-NH2 35
    Abz-Val-2Nal-hLeu-Ser-Tyr (NO2)-Asp-NH2 NS
    Abz-Val-ACP-hLeu-Ser-Tyr (NO2)-Asp-NH2 NS
    Abz-Val-DLys-hLeu-Ser-Tyr (NO2)-Asp-NH2 NS
    Abz-Val-DGln-hLeu-Ser-Tyr (NO2)-Asp-NH2 NS
    Abz-Val-3pyr-hLeu-Ser-Tyr (NO2)-Asp-NH2 NS
    Abz-Val-Cha-hLeu-Ser-Tyr (NO2)-Asp-NH2 NS
    Abz-DVal-Ala-hLeu-Ser-Tyr (NO2)-Asp-NH2 NS
    Abz-Gln-Ala-hLeu-Ser-Tyr (NO2)-Asp-NH2 12
    Abz-Lys-Ala-hLeu-Ser-Tyr (NO2)-Asp-NH2 >15
    Abz-Tic-Ala-hLeu-Ser-Tyr (NO2)-Asp-NH2 NS
    Abz-ACH-Ala-hLeu-Ser-Tyr (NO2)-Asp-NH2 NS
    Abz-Met(O)-Ala-hLeu-Ser-Tyr(NO2)-Asp-NH2 20
    Abz-3pyr-Ala-hLeu-Ser-Tyr (NO2)-Asp-NH2 >10
    Abz-2Nal-Ala-hLeu-Ser-Tyr (NO2)-Asp-NH2 15
    Abz-Leu-Ala-hLeu-Ser-Tyr (NO2)-Asp-NH2 18
    Abz-Cha-Ala-hLeu-Ser-Tyr (NO2)-Asp-NH2 9
    Abz-Bip-Ala-hLeu-Ser-Tyr (NO2)-Asp-NH2 2.5
    Abz-Bip-Ala-hLeu-Tyr-Tyr (NO2)-Asp-NH2 3
    Abz-Bip-Ala-hLeu-Leu-Tyr (NO2)-Asp-NH2 3.7
    Abz-Bip-Ala-hLeu-Lys-Tyr (NO2)-Asp-NH2 2
    Abz-Bip-Ala-hLeu-Asp-Tyr (NO2)-Asp-NH2 5.0
    Abz-Bip-Ala-hLeu-Abu-Tyr (NO2)-Asp-NH2 1.7
    Abz-Bip-Ala-hLeu-Cha-Tyr (NO2)-Asp-NH2 2.5
    Abz-Bip-Ala-hLeu-Met(O)-Tyr (NO2)-Asp-NH2 5
    Abz-Bip-Ala-hLeu-Thr-Tyr (NO2)-Asp-NH2 2.5
    Abz-Bip-Ala-hLeu-3pyr-Tyr (NO2)-Asp-NH2 4
    Abz-Bip-Ala-hLeu-ButGly-Tyr (NO2)-Asp-NH2 4
    Abz-Bip-Ala-hLeu-Hyp-Tyr (NO2)-Asp-NH2 4
    Abz-Phe-Val-Ala-Nle-Ser-Tyr (NO2)-Asp-NH2 NM
    Abz-3.Pyr-Val-Ala-Nle-Ser-Tyr (NO2)-Asp-NH2 NM
    Abz-1.Naph-Val-Ala-Nle-Ser-Tyr (NO2)-Asp-NH2 17
    Abz-2.Naph-Val-Ala-Nle-Ser-Tyr (NO2)-Asp-NH2 NM
    Abz-Tyr-Val-Ala-Nle-Ser-Tyr(NO2)-Asp-NH2
    Abz-Bip-Val -Ala-Nle-Ser-Tyr (NO2)-Asp-NH2 10
    Abz-Lys-Val-Ala-Nle-Ser-Tyr(NO2)-Asp-NH2 15
    Abz-Glu-Val-Ala-Nle-Ser-Tyr (NO2)-Asp-NH2 20
    Abz-Leu-Val-Ala-Nle-Ser-Tyr (NO2)-Asp-NH2
    Abz-Hyp-Val-Ala-Nle-Ser-Tyr (NO2)-Asp-NH2 NS
  • Ranked in order of cleavage rate:-Bz>n-But>Piv>Bz(2-carboxy)>Abz. [0190]
  • Coupling of amino acid residues was carried out according to the multipin approach described above. Whilst the multipin assembly was drying, the appropriate Nα-Fmoc amino acids (10 equivalents calculated from the loading of each crown), HATU coupling agent (9.9 equivalents calculated from the loading of each crown), HOAt catalyst (9.9 equivalents calculated from the loading of each crown) and DIPEA (19.9 equivalents calculated from the loading of each crown) were accurately weighed into suitable containers. [0191]
  • The protected Nα-Fmoc amino acids and coupling agents were then dissolved in DMF (500 μl for each macrocrown) and activated by the addition of DIPEA. The appropriate derivatives were then dispensed to their appropriate wells and standard coupling to each macrocrown was allowed to proceed for 2 hours. [0192]
  • When coupling particularly hindered amino acid residues such as N-Methyl, Ca-Methyl or unusual amino acids (whose coupling efficiency is unknown) the coupling reaction was repeated, as standard, for a further 2 hours. [0193]
  • The following sequences were synthesised in this way: [0194]
    Measured
    Peptide Sequence [SEQ ID Nos. 77-85] Km(μM)
    Abz-Val-Ala-(NMe)Nle-Ser-Tyr(NO2)-Asp-NH2 NS
    Abz-Val-(NMe)Ala-Nle-Ser-Tyr(NO2)-ASP-NH2 NS
    Abz-Val-Ala-Aib-Ser-Tyr(NO2)-Asp-NH2 NS
    Abz-Val-Aib-Nle-Ser-Tyr(NO2)-Asp-NH2 NS
    Abz-Deg-Ala-Nle-Ser-Tyr(NO2)-Asp-NH2 NS
    nBu-D.Ser-D.Nle-D.Ala-D.Val-p.Aba-NH2 NS
    Bz-Val-Ala-Statine-Ser-eAha-NH2 NS
    Abz-p.Aba-Nle-Ser-Tyr(NO2)-Asp-NH2 NS
    Abz-Cmpi-Nle-Ser-Tyr(NO2)-ASP-NH2 NS
  • Assay Procedure [0195]
  • Each mixture of 20 compounds in the libraries of the apparatus described herein was screened at a concentration of 1.0 μM per compound in an assay against the cysteinyl protease Der pI. The most active wells were identified by the rate of emission of fluorescence at 420 nm when the samples were irradiated at 320 nm. An analysis of the two complementary libraries showed that the best substrates for the enzyme were: [0196]
  • Abz-B-C-D-E-Tyr(NO2)-Asp-NH2 [0197]
  • Where [0198]
  • B=Valine>Alanine, Glutamine, Leucine, Phenylalanine [0199]
  • C=Alanine>>Glutamine, or Lysine. [0200]
  • D=Leucine, Norleucine or Alanine>Serine [0201]
  • E=Serine [0202]
  • The best substrate was: [0203]
  • [SEQ ID:1] Abz-Val-Ala-Nle-Ser-Tyr(NO[0204] 2) -Asp-NH2
  • This compound was then resynthesised as a single component using the peptide synthesis methodology described herein. The k[0205] cat/Km value for the pure substrate in the Der pI assay was measured as 3.5×104M−1s−1, and was considered to be suitably high for use in a high throughput assay for the general screening of inhibitors of Der pI.
  • High Throughput Assay Development [0206]
  • Plate assays were carried out in 96 well plate format, using 0.1 ug of Der pI per 100 μL assay volume in each well and using 20 μM of the substrate. All assays were performed in Assay Buffer (AB; 50 mM potassium phosphate, pH 8.25 containing 1 mM ethylenediaminetetraacetic acid (EDTA) and 1 mM dithiothreitol (DTT). The Der pI enzyme is pre-activated by addition of DTT and this in incubated at room temperature for 5 min. prior to initiation of the assay. As an example for the screening methodology, each well contains a 5 μL of a 20 μM solution of the test compound in DMSO, 10 μL of a 200 μM aqueous solution of the substrate, 2, and 85 μL of Der pI in AB is added to initiate the reaction. Enzyme activity is monitored by fluorescence using 320 nm for excitation and 420 nm for the emission wavelengths using a Labsystems Fluroskan Ascent machine. Kinetic measurements were carried out using a Hitachi F-4500 Fluorescence Spectrophotometer. [0207]
  • Synthesis of Inhibitors of Der pI [0208]
  • The best substrate described above was shown by HPLC-mass spectroscopic analysis of the enzyme/assay solution, to be cleaved between the Norleucine-Serine amide bond. Replacement of the terminal Abz group by a series of derivatives (e.g. Poc-, Pivaloyl, Benzoyl, and 2-carboxy-Benzoyl) affected substrate activity and specificity for the Der pI enzyme. With this knowledge of the P[0209] 1-P1′ cleavage site and for the P4-P3-P2-P1 motif, the compound Boc-Val-Ala-Leu-H, 4, was synthesised as shown in Scheme 1a, FIG. 15.
  • Attachment of a suitable Michael acceptor such as CH═CH—CO2Et, and —CH═CH—SO[0210] 2 Ph to the motif (Scheme 2, FIG. 16), provided active inhibitors of the enzyme with apparent IC50 values of 50 nM, 1000 nM and 100 nM respectively.
  • Preparation of an Acyloxymethylketone Series [0211]
  • A series of acyloxymethylketone compounds having active Der PI inhibitor activity was prepared by the following procedures: [0212]
  • N-Benzoyl-L-valyl-L-alanyl-L-norleucine [0213]
  • N-Benzoyl-L-valyl-L-alanyl-L-norleucine was prepared by solid phase benzoylated peptide synthesis as follows: [0214]
  • Resin Loading (Step 1) [0215]
  • 2-Chlorotritylchloride resin (4.9 g, 1.05 mmol/g, Novabiochem) was swelled in dichloromethane (40 ml) and a suspension of Fmoc-L-norleucine added and stirred for 5 minutes. A solution of diisopropylethylamine in DCM(10 ml, 57 mmol in 30 ml) was added over 5 minutes and the resulting mixture stirred at room temperature for 2 hours. Methanol (5 ml) added and reaction mixture stirred for a further 10 minutes before resin filtered and washed with 3×DCM, 2×DMF, 2×2-propanol, 2×DMF, 2×2-propanol, methanol, 2×ether and dried under vacuum for 24 hours. [0216]
  • Amino Acid Deprotection (Step 2) [0217]
  • Fmoc-L-norleucine loaded resin was deprotected by 20 treatment with 20% piperidine in DMF over 4 hours. The swollen resin was filtered, washed with 5×DMF, 2×ether and dried under vacuum for 24 hours. [0218]
  • Peptide Chain Extension (Step 3) [0219]
  • L-Norleucine loaded resin (5 mmol) was added to a solution of Fmoc-L-alanine (6.23 g, 20 mmol), hydroxybenzotriazole (3.0 g, 20 mmol), 2-(1-H-benzotriazole-1-yl)-1,1,3,3-tetramethyluronium hexafluorophosphate (7.59 g, 20 mmol) and diisopropylethylamine (6.97 ml, 40 mmol) in DMF (20 ml) and allowed to swell over 4 hours with mild agitation. Resin was filtered and washed with 4×DMF, 2×ether and dried under vacuum overnight. [0220]
  • Steps (2) and (3) were carried out repetitively with Fmoc-L-alanine and Fmoc-L-valine to afford resin bound tripeptide H-L-valyl-L-alanyl-L-norleucine. [0221]
  • Peptide Chain Benzoylation (Step 4) [0222]
  • L-Valyl-L-alanyl-L-norleucine loaded resin (1 g, approx. 1 mmol) was added to a solution of benzoic acid (0.488 g, 4 mmol), hydroxybenzotriazole (0.6 g, 4 mmol), 2-(1-H-benzotriazole-1-yl)-1,1,3,3-tetramethyluronium hexafluorophosphate (1.52 g, 4 mmol) and diisopropylethylamine (1.40 ml, 8 mmol) in DMF (5 ml) and allowed to swell over 6 hours with mild agitation. Resin was filtered and washed with 4×DMF, 2×ether and dried under vacuum overnight. [0223]
  • Resin Cleavage (Step 5) [0224]
  • N-Benzoyl-L-valyl-L-alanyl-L-norleucine loaded resin (1.0 g, approx. 1 mmol) was treated with a 1% solution of trifluoroacetic acid in dichloromethane (20 ml) containing triethylsilane (320 ml, 2 mmol) for 1 hour. Resin was removed by filtration and washed with dichloromethane (3×10 ml). Organic layer was collected, evaporated and titrated with ether to afford N-benzoyl-L-valyl-L-alanyl-L-norleucine.(285 mg). Electrospray-MS m/z 407 [MH[0225] +].
  • Bromomethylketone Formation (Step 6) [0226]
  • N-Benzoyl-L-valyl-L-alanyl-L-norleucine bromomethyl ketone N-Benzoyl-L-valyl-L-alanyl-L-norleucine(140 mg, 0.34 mmol) was suspended in dry THF(3 ml) and dry DMF was added dropwise to afford homogeneity. The reaction mixture was cooled to-10° C. and isobutylchloroformate (129 ml, 11.0 mmol) and N-methylmorpholine (109 ml, 1.0 mmol) added with stirring under Argon. The mixture was stirred for 30 minutes before a solution of diazomethane in ether(5 ml, approx. 2 mmol) was added. The reaction mixture was allowed to warm to room temperature over 1 hour before a 1:1 solution of is acetic acid and 50% HBr (1 ml, 3.0 mmol HBr) was added dropwise and stirred for 15 minutes. The organic phase was diluted with ethylacetate (40 ml), washed with water (10 ml), brine (10 ml) and sodium bicarbonate (2×10 ml), dried over MgSO[0227] 4 solvent removed under vacuum. This afforded an off white solid (152 mg) which could be further purified as required by prep. HPLC. Electrospray-MS m/z 482 [MH+] and 484 [MH+].
  • Acyloxymethylketone Formation (Step 7) [0228]
  • N-Benzoyl-L-valyl-L-alanyl-L-[0229] norleucine 2,6-bis(trifluoro methyl) Benzoyloxymethyl Ketone
  • A mixture of potassium fluoride (0.1 mmol, 6 mg) and 2,6-bis(trifluoromethyl)benzoic acid (0.066 mmol, 17 mg) in dry DMF (500 ml) was stirred over molecular sieves at room temperature for 5 minutes. A solution of N-benzoyl-L-valyl-L-alanyl-L-norleucine bromomethyl ketone (0.033 mmol, 16 mg) in dry DMF (500 ml) was added and the reaction mixture stirred for 1 hour. The reaction mixture was passed through a short silica plug and washed with 5% methanol in dichloromethane. Solvent was removed under vacuum and the residue purified using prep. HPLC. Freeze drying afforded (6.4 mg) as a white lyophilisate. Electrospray-MS m/z 660 [MH[0230] +].
  • 10 Similarly the following compounds were prepared: [0231]
  • N-Benzoyl-L-valyl-L-alanyl-L-[0232] norleucine 2,6-dimethylbenzoyloxymethyl ketone (Electrospray-MS m/z 552 [MH+]) from of N-benzoyl-L-valyl-L-alanyl-L-norleucine bromomethyl ketone and 2,6-dimethylbenzoic acid.
  • N-Benzoyl-L-valyl-L-alanyl-L-norleucine 2-hydroxybenzoyloxymethyl ketone (Electrospray-MS m/z 540 [MH[0233] +] from of N-benzoyl-L-valyl-L-alanyl-L-norleucine bromomethyl ketone and 2-hydroxybenzoic acid.
  • N-Benzoyl-L-valyl-L-alanyl-L-[0234] norleucine 2,6-dichlorobenzoyloxymethyl ketone (Electrospray-MS m/z 592 [MH+] and 594 [MH+] from of N-benzoyl-L-valyl-L-alanyl-L-norleucine bromomethyl ketone and 2,6-dichlorobenzoic acid.
  • N-Benzoyl-L-valyl-L-alanyl-L-norleucine benzoyloxymethyl ketone (Electrospray-MS m/z 524 [MH[0235] +]) from of N-benzoyl-L-valyl-L-alanyl-L-norleucine bromomethyl ketone and benzoic acid.
  • N-Benzoyl-L-valyl-L-alanyl-L-[0236] norleucine 2,3,4,5,6-pentafluorobenzoyloxymethyl ketone (Electrospray-Ms m/z 614 [MH+]) from of N-benzoyl-L-valyl-L-alanyl-L-norleucine bromomethyl ketone and 2,3,4,5,6-pentafluorobenzoic acid.
  • N-Benzoyl-L-valyl-L-alanyl-L-[0237] norleucine 1,1-dimethylpropyloxymethyl ketone (Electrospray-MS m/z 504 [MH+])from of N-benzoyl-L-valyl-L-alanyl-L-norleucine bromomethyl ketone and 1,1-dimethylpropanoicacid.
  • N-Benzoyl-L-valyl-L-alanyl-L-norleucine N(-benzyloxycarbonyl)-D-serinyl-(O-tert-butyl)oxymethyl ketone (Electrospray-MS m/z 697 [MH[0238] +])from of N-benzoyl-L-valyl-L-alanyl-L-norleucine bromomethyl ketone and N-benzyloxycarbonyl-D-serine-O-tert-butylether.
  • N-Benzoyl-L-valyl-L-alanyl-L-norleucine N(-benzyloxycarbonyl)-D-serineoxy methyl ketone (Electrospray-MS m/z 641 [MH[0239] +])from of N-benzoyl-L-valyl-L-alanyl-L-norleucine bromomethyl ketone and N-benzyloxycarbonyl-D-serine.
  • N-Benzoyl-L-valyl-L-alanyl-L-norleucine 2-furanoxy methyl ketone (Electrospray-MS m/z 514 [MH[0240] +])from of N-benzoyl-L-valyl-L-alanyl-L-norleucine bromomethyl ketone and 2-furan carboxylic acid.
  • N-Benzoyl-L-valyl-L-alanyl-L-[0241] norleucine 2,6-dichlorophenylacyloxy methyl ketone (Electrospray-MS m/z 606 [MH+], 608 [MH+]) from of N-benzoyl-L-valyl-L-alanyl-L-norleucine bromomethyl ketone and 2,6-dichlorophenylacetic acid.
  • Standard Prep. HPLC conditions were as follows: C4 preparative HPLC system (Vydac, 22×250 mm) eluting at 10 ml per minute a gradient of 5-95% (90% acetonitrile (0.1% TFA)) over 30 minutes. [0242]
  • The following compounds were prepared by the techniques and procedures described beneath each named compound. [0243]
  • Preparation of Ethyl-(S)-(E)-3-((tert-butoxy Carbonyl Amino Valyl Alanyl) Amino-6-methyl-hept-2-enoate [0244]
  • To a suspension of sodium hydride (46 mg, 1.9 mmol) in anhydrous THF (4 ml) cooled to 0° C. was added a solution of triethylphosphonoacetate (420 mg, 1.9 mmol) in THF (2 ml) dropwise over 5 minutes and the mixture stirred until gas evolution ceased. The solution was added dropwise to a solution of BocVAL-CHO (600 mg, 1,56 mmol) in dry THF cooled to −10° C. The reaction mixture was stirred for 1 hour and saturated ammonium chloride (10 ml) was added. A white solid precipitated which was removed by filtration and the filtrate was partitioned between ethyl acetate and water. The organic layer was dried with magnesium sulphate and evaporated to give an oil which was crystallised from acetonitrile water to yield the title compound, 640 mg, 91%. [0245]
  • MS (EI+ve) required (M[0246] +(C23H41N3O6)+1)=456: found(M++H)=456, ((M-tBOC)+1)=356 (100%).
  • Preparation of (S)-(E)-3-((tert-butoxy Carbonyl Amino Valyl Alanyl) Amino-6-methyl-hept-2-enoic Acid [0247]
  • The ethyl ester (455 mg, 1 mmol) was dissolved in dioxane (10 ml) and water added followed by lithium hydroxide (126 mg, 3 mmol). The solution was stirred for 3 hours and 1M HCl aq was added until the pH reached neutrality. The dioxane was removed by rotary evaporation and the pH adjusted to 4 with 1M HCl aq. The title compound precipitated, filtered and washed with water to yield 420 mg, 98%. [0248]
  • MS (EI+ve) required (M[0249] +(C21H37N3O6)+1)=428: found(M++H)=428 (100%).
  • Preparation of 1,1,1-Trifluoroethyl-(S)-(E)-3-((tert-Butoxy Carbonyl Amino Valyl Alanyl) Amino-6-methyl-hept-2-enoate [0250]
  • The acid (BocVAL-CO[0251] 2H) (50 mg, 0.117 mmol) and dimethylaminopyridine (29 mg, 0.24 mmol) was dissolved in dry dichloromethane (1 ml) and cooled to 0° C. Water soluble carbodiimide hydrochloride salt (26 mg, 0.13 mmol) in 0.5 ml dichloromethane was added and the solution stirred for 5 minutes. 1,1,1-Trifluoroethanol (0.017 ml, 0.23 mmol) in 0.5 ml dichloromethane was added and the reaction was allowed to warm to room temperature after 1 hour and the reaction mixture stirred overnight. The reaction mixture was washed 2×2 ml 0.5 M citric acid solution, 1×2 ml water, 1×2 ml saturated sodium bicarbonate solution, 1×2 ml water, dried with magnesium sulphate and evaporated to dryness to give the title compound.
  • MS (EI+ve) required (M[0252] +(C21H38N3O6F3)+1)=510: found(M++H)=510, ((M+-tBOC)+1)=410, ((M+-tBu)+1)=454 (100%).
  • Preparation of Ethyl-(S)-(E)-3-(N-benzoyl Valyl Alanyl) Amino-6-methyl-hept-2-enoate [0253]
  • The tert-butoxy carbonyl protected ethyl ester (16.6 mg, 0.036 mmol) was dissolved in 4.0M HCl in dioxane (2 ml) stirred at room temperature for 30 minutes and evaporated to dryness. The residue was dissolved in DMF (0.5 ml) and N-methylmorpholine (7.36 mg, 0.073 mmol) added followed by benzoyl chloride (5.4 mg. 0.038 mmol) in DMF 0.5 ml. The reaction stirred for 2 hours, diluted with 0.1% trifluoroacetic acid solution (4 ml) and acetonitrile (2 ml) and injected onto a C4 preparative HPLC system (22×250 mm) eluting at 10 ml per minute, monitoring at 215 nm and a gradient of 10-90% system B over 25 minutes and holding at 90% for 15 minutes. System A=0.1% TFA in water, system B=90% acetonitrile, 10% system A. The peak eluting at 26-28 minutes was collected and lyophilised to a white solid, yield 4.5 mg, 27%. [0254]
  • Analysis by MS (EI+ve) required (M[0255] +(C21H37N3O5)+1)=460: found(M++H)=460.
  • Preparation of Diethyl Phenylsulfonylmethylphosphonate [0256]
  • The Diethyl Phenyl sulfonylmethylphophonate was prepared using a method adapted from I. Shahak, and J. Almog. ([0257] Synthesis, 145,1970).
  • The commercially available diethyl phenylthiomethylphosphonate (1.0 ml, 4.1 mmol) was dissolved in dichloromethane (10 ml). Sulphuric acid (10 ml, 25%) was added and the mixture cooled on ice. Solid potassium permanganate was then added in three aliquots of 0.5 g with stirring. After the additions the reaction appeared to be complete. Solid sodium metabisulfite was added slowly until the mixture turned colourless. This was then extracted with ethyl acetate (×3) and the combined organic washings washed with saturated sodium bicarbonate solution followed by brine before drying over sodium sulphate. The volatiles were removed in vacuo. The residue was purified by flash chromatography on silica eluting initially with ethyl acetate/[0258] hexane 8/2 followed by pure ethyl acetate.
  • In this way the desired product, diethyl phenylsulfonylmethylphosphonate (1.0 9, quant) was obtained as a colourless solid. [0259]
  • The product was analysed by mass spectrometry (MS) (MALDI-TOF): required (M[0260] +(C11H17O5PS)+1)=292; obtained (M++1)=292
  • Preparation of (S)-(E)-3-((tert-butoxycarbonylamino-valyl)alanyl)amino-1-phenylsulfonyl-5-methyl-1-hexene Diethyl phenylsulfonylmethylphosphonate (38 mg, 129 mmol) was dissolved in dry THF (10 ml) and then cooled to 0° C. under an atmosphere of nitrogen. Sodium hydride (8 mg of 60% dispersion in oil, 200 mmol) was added and the mixture stirred for 15 mins (effervescence). The aldehyde [0261] tBoc-Val-Ala-Leu-CHO (50 mg, 129 mmol) was then added to the resulting solution and the mixture was stirred for 60 mins. The reaction was quenched by the addition of dilute hydrochloric acid (0.1 M), followed by extraction with ethyl acetate (×3). The separated organic phase was sequentially washed with saturated sodium bicarbonate solution and brine before drying over sodium sulphate. The volatiles were removed in vacuo. The residue was purified by flash chromatography on silica eluting with ethyl acetate/hexane 4/6. An unidentified by-product was eluted first (12 mg) followed by the desired product (S)-(E)-3-((tert-butoxycarbonylamino-valyl)alanyl)amino-phenylsulfonyl-5-methyl-1-hexene (22 mg, 32%) as a solid.
  • MS (electrospray) required (M[0262] +(C26H41O6N3S)+1)=523: found (M++Na)=546, ((M-tBoc)+1)=424 (100%).
  • Preparation of Diethyl Methylsulfonylmethylphosphonate [0263]
  • The commercially available Diethyl methylthiomethylphosphonate was converted to the title compound using the method of I. Shahak and J. Almog ([0264] Synthesis, 171, 1969).
  • Preparation of (S)-(E)-3-((tert-butoxycarbonylamino-valyl)alanyl)amino-1-methylsulfonyl-5-methyl-1-hexene [0265]
  • Diethyl methylsulfonylmethylphosphonate (30 mg, 130 mmol) was dissolved in dry THF (5 ml) and then cooled to 0° C. under an atmosphere of nitrogen. Sodium hydride (7 mg of 60% dispersion in oil, 175 mmol) was added and the mixture stirred for 15 mins (effervescence). The aldehyde [0266] tBoc-Val-Ala-Leu-CHO (50 mg, 129 mmol) was then added to the resulting solution and the mixture then stirred for 60 mins. The reaction was quenched by addition of dilute hydrochloric acid (0.1 M), followed by extraction with ethyl acetate(×3). The separated organic phase was sequentially washed with saturated sodium bicarbonate solution and brine before drying over sodium sulphate. The volatiles were then removed in vacuo. The residue was purified by flash chromatography on silica eluting with ethyl acetate/hexane 8/2. An unidentified by-product was eluted first (4 mg), followed by the desired product (S)-(E)-3-((tert-butoxycarbonylamino-valyl)alanyl)amino-methylsulfonyl-5-methyl-1-hexene (24 mg, 40%) as a solid.
  • MS (electrospray) required (M[0267] +(C21H39O6N3S)+1)=462: found (M++Na)=484, ((M-tBoc)+1)=362 (100%).
  • Preparation of Ethyl Diethylphosphorylmethylsulfonate [0268]
  • Prepared in accordance with procedure B described in L. Ghosez et. al. ([0269] Tetrahedron, 43, 5125, 1987).
  • The product was analysed on MS (electrospray) required (M[0270] +(C7H17O6PS)+1)=261: Found (M++H)=261, (M++Na)=283.
  • Preparation of Diethyl(S)-(E)-3-((tert-butoxycarbonylamino-valyl)alanyl)amino-5-methylhexenylsulfonate. [0271]
  • Ethyl diethylphosphorylmethanesulfonate (36 ml, −138 mmol) was dissolved in dry THF (5 ml) and then cooled to 0° C. under an atmosphere of nitrogen. Sodium hydride (8 mg of 60% dispersion in oil, 200 mmol) was added and the mixture stirred for 15 mins (effervescence). The aldehyde [0272] tBoc-Val-Ala-Leu-CHO (50 mg, 129 mmol) was added to the resulting solution and the mixture stirred for 30 mins. The reaction was quenched by addition of dilute hydrochloric acid (0.1 M), followed by extraction with ethyl acetate (×3). The separated organic phase was sequentially washed with sodium bicarbonate solution and brine before drying over sodium sulphate. The volatiles were then removed in vacuo. The residue was purified by flash chromatography on silica eluting with ethyl acetate/hexane 1/1. The desired product Diethyl(S)-(E)-3-((tert-butoxycarbonylamino-valyl)alanyl)amino-5-methylhexenylsulfonate, (22 mg, 35%) was obtained as a solid.
  • MS(electrospray) required(M[0273] +(C22H41O7N3S)+1)=492: found (M++1)=492, ((M+-tBoc)+1)=392 (1000%)
  • Example 2
  • Design of Depsipeptides [0274]
  • Another suitable bond in a compound of general formula (I), (II) or (III) according to the invention is an ester bond to form a depsipeptide. The incorporation of depsipeptide substrates aided the identification of substrates for low reactivity viral proteases, such as viral serine proteases. [0275]
  • For example, substrates of the general formula [0276]
  • n[Abz-B1-10-C1-10-D1-8 y[COO]-E1-8-Tyr(NO2)-Asp-NH2]
  • were produced. [0277]
  • However, a significant proportion of viral proteases only recognise substrate sequences larger than those represented by the general structure above. It is well acknowledged that by the very nature of action of a viral protease (function is to cleave immature viral proteins into the mature viral package) one automatically receives data concerning the natural substrate sites. Thus, the general structure above can be extended by introducing extra fixed amino-acids at appropriate sites. A logical extension would be to introduce the known P[0278] 1-P1′ cleavage site as the depsipeptide bond, then subsequently introduce the four variant positions following the standard format thus;
  • n[Abz-B1-10-C1-10-D1-8-E1-8-P1 y[COO]-P1′-Tyr(NO2)-Asp-NH2]
  • Furthermore, if these substrates again proved to be too small, one may use the known substrate sequences to introduce additional fixed positions. For instance, with Hepatitis NS3 protease it is known that the natural P[0279] 6 position is a conserved acidic residue (aspartic or glutamic acid). Thus one could extend the above structure as detailed below.
  • n[Abz-P6-B1-10-C1-10-D1-8-E1-10-P1 y[COO]-P1′-Tyr(NO2)-Asp-NH2]
  • The novel methodology described herein greatly faciltiates the invention of therapeutically useful proteolytic enzyme inhibitors and is commercially exploitable. This is because the best substrate motif for the proteolytic enzyme can be rapidly identified, and, since there exist in the literature a variety of ways for attaching motifs which react with the active site of a proteolytic enzyme, especially for aspartyl, metallo, serine and cysteinyl proteases, an enzyme inhibitor can be readily synthesised. Moreover, amide bond replacements or transition state mimetics can be incorporated into the molecule, which would be especially useful for the inhibition of aspartyl or metallo proteases. [0280]
  • The method described also facilitates the rapid development of a screening assay for novel protease inhibitors. The most potent fluorogenic substrate discovered by library screening can subsequently be used for the detection of inhibitors of the particular proteolytic enzyme under scrutiny. [0281]
  • The presence of an inhibitor within the compound libraries is described is readily detected by retreatment of the assay mixture with the most active fluorogenic substrate, which will allow the immediate measurement of the remaining proteolytic enzyme activity. [0282]
  • The invention provides self-decoding, combinatorial fluorogenic libraries, and it will greatly facilitate the design and invention of novel protease inhibitors because: [0283]
  • i. The peptides of the library may have increased aqueous solubility in comparison to peptides containing similar and other fluorogenic and quencher groups. [0284]
  • ii. The peptides are stable to contaminating exopeptidases. [0285]
  • iii. The self deconvolution-method described, coupled with the continuous analysis of the rate of substrate cleavage data, allows the immediate identification of the most active binding motif contained within the substrate library. [0286]
  • iv. The method allows for the rapid assessment of the enzyme assay mixture for any compounds in the library that are acting as enzyme inhibitors. [0287]
  • Abbreviations [0288]
  • Abbreviations used herein are as follows: [0289]
  • Abbreviations for amino acids and nomenclature of peptide structures follow the recommendations given in: IUPAC-IUB Commission on Biochemical Nomenclature, ([0290] J. Biol. Chem, 247, 997, 1971). All chiral amino acids are of the L configuration unless otherwise stated. Other abbreviations used are:
  • -Abu, b-amino butyric acid,:Abz, 2-amino benzoyl:ACH, 1-amino-1-carboxy-cyclohexane:ACP, 1-amino-1-carboxy-cyclopropane:Bip, Biphenylalanine:n-Bu, n-butoxycarbonyl:Bz, Benzoyl:Bz(2-carboxy), 2-carboxybenzoyl:Bu[0291] tGly, tert-Butylglycyl:BOP, benzotriazoyl-oxy-tris-(dimethylamino)-phosphonium hexafluorophosphate:Cha, cyclohexylalanine:Chex, 1-carboxycyclohexyl:eAHA, gamma aminohexanoyl:HBTU, O-benzotriazoyl-N,N,N′,N′-tetramethyluronium hexafluorophosphate:HOBt, 1-hydroxybenzotriazole:Hyp, trans-4-hydroxyprolinyl:hLeu, homoleucyl:2Nal, 2-napthylalanine:NMM, N-methylmorpholine:Piv, pivoyl 3pyr, 3-pyridylalanine:Tic, 2-carboxytetrahydroquinolyl:Tyr(NO2), 3-nitrotyrosine.
  • DMF, dimethylformamide; Fmoc, fluorenylmethoxycarbonyl; HPLC, high performance liquid chromatography; Pfp, pentafluorophenyl, tBoc, tert-butoxycarbonyl; tBu, tert-butyl; TFA, trifluoroacetic acid; Pmc, pentamethyl chroman, Pbf, pentamethylbenzofuran, TBTU, 2-(1H-Benztrotriazole-1-yl)-1,1,1,3,3-tetramethyluronium tetrafluoroborate; Trt, Trityl. [0292]
  • p.Aba, 4-aminobenzoyl; Aib, Aminoisobutyric acid; Bip, Biphenylalanine; nBu, n-Butyl; Bz, Benzoyl; Cmpi, Carboxymethylpiperazine; Deg, Diethylglycine; DIPEA, N,N-Diisopropyl-ethylamine; HATU, 0-(7-azabezotriazol-1-yl)-1,1,3,3-tetramethyluronium hexafluorophosphate; HOAT, 1-hydroxy-7-azabenzotriazole; Naph, Naphthylalanine; 3.Pyr, 3-pyridiylalanine; Tyr(NO,), 3-nitro-tyrosine. [0293]
  • REFERENCES
  • 1. I. Schlechter and A. Berger, Biochem. Biophys. Res. Commun., 1967, 27, 157-162) [0294]
  • 2. A. Carmel et al., FEBS Lett., 1973, 30, 11. [0295]
  • 3 M. M. Meldal and I. Svendsen, J. Chem. Soc. Perkin Trans. 1, 1995, 1591-1596, [0296]
  • 4. M. Meldal and K. Breddam, Anal. Biochem., 1991, 195, 141-147, [0297]
  • 5. T. Forster, Ann. Phys., 1948, 6, 55. [0298]
  • 6. A. Yaron, A. Carmel, and E. Katchalski-Katzir, Anal. Biochem. 1979, 95, 228 and references therein. [0299]
  • 7. S. A. Latt et al., Anal. Biochem., 1972, 50, 56. [0300]
  • 8. A. Persson et al., Anal. Biochem., 1977, 83, 2,96. [0301]
  • 9. I. Yu Filppova et al., Bioorg. Khim., 1986, 12, 1172. [0302]
  • 10. J. Pohl et al., Anal. Biochem., 1987, 165, 96. [0303]
  • 11. S. J. Pollack et al., J. Am. Chem. Soc., 1989, 111, 5961. [0304]
  • 12. E. K. Bratovanova and D. D. Petkov, Analytical Biochem., 1987, 162, 213. [0305]
  • 13. J. Singh et al., J. Med. Chem., 1995, 38, 217-219 and references. therein. [0306]
  • 14. M. Green et al. in ‘Innovation and Perspectives in Solid Phase Synthesis’ (R. Epton Ed.) Mayflower Worldwide Ltd., Birmingham, UK. 1994, 239-244. [0307]
  • 15. J. R. Petithory et al., Proc. Natl. Acad. Sci. USA, 1991, 88, 11510-11514 [0308]
  • 16. J. Berman et al., J. Biol. Chem., 1992, 267, 1434-1437. [0309]
  • 17. H. Drevin, A, -T. Martin, J. Carlsson, S. Oscarsson, T. Lovgren, I. Hemmila and M. Kwiatkowski, WO89/10975, (May 5, 1988) [0310]
  • 18. A. J. Garman and N. G. Phillips, WO 94/28166 (May 27, 1993) [0311]
  • 19. G. T. Wang and E. D. Matayoshi, E.P. 428000 (Nov. 3, 1989) [0312]
  • 20. G. A. Krafft, G. T. Wang and E. D. Matayoshi, EP 428000, (Nov. 3, 1989). [0313]
  • 21. G. R. Marshall and M. V. Toth, U.S. Pat. No. 5,164,300, (Dec. 11, 1990). [0314]
  • 22. G. R. Marshall and M. V. Toth, U.S. Pat. No. 5,011,910, (Dec. 28, 1989). [0315]
  • 23. K. T. Chapman, N. A. Thornberry, M. Maccoss, J. R. Weidner, R. A. Mumford, W. K. Hagmann, EP 528487A (Aug. 16, 1991) [0316]
  • 24. R. P. Haugland, WO 93/04077, (Aug. 23, 1991) [0317]
  • 25. R. M. Valerio, A. M. Bray N. J. Maeji, Int. J. Peptide Protein Res., 1994, 44, 158-165 [0318]
  • 26. M. Bastos, N. J. Maeji and R. H. Abeles, Proc. natl. Acad. Sci., 1995, 92, 6738-6742. [0319]
  • 27. ‘Solid Phase Peptide Synthesis’, E. Atherton and R. C. Sheppard, IRL Press 1989. [0320]
  • 0
    SEQUENCE LISTING
    <160> NUMBER OF SEQ ID NOS: 105
    <210> SEQ ID NO 1
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 1
    Xaa Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 2
    <211> LENGTH: 6
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 2
    Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 3
    <211> LENGTH: 5
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 3
    Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 4
    <211> LENGTH: 6
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 4
    Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 5
    <211> LENGTH: 5
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 5
    Val Ala Xaa Ser Xaa
    1 5
    <210> SEQ ID NO 6
    <211> LENGTH: 5
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 6
    Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 7
    <211> LENGTH: 5
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 7
    Val Ala Xaa Ser Xaa
    1 5
    <210> SEQ ID NO 8
    <211> LENGTH: 6
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 8
    Xaa Val Ala Xaa Ser Xaa
    1 5
    <210> SEQ ID NO 9
    <211> LENGTH: 5
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: Nle
    <400> SEQUENCE: 9
    Xaa Val Ala Xaa Ser
    1 5
    <210> SEQ ID NO 10
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: Nle
    <400> SEQUENCE: 10
    Xaa Val Ala Xaa Ser Phe Asp
    1 5
    <210> SEQ ID NO 11
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: Nle
    <400> SEQUENCE: 11
    Xaa Val Ala Xaa Ser Tyr Asp
    1 5
    <210> SEQ ID NO 12
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: Nle
    <400> SEQUENCE: 12
    Xaa Val Ala Xaa Ser Ala Asp
    1 5
    <210> SEQ ID NO 13
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: Nle
    <400> SEQUENCE: 13
    Xaa Val Ala Xaa Ser Lys Asp
    1 5
    <210> SEQ ID NO 14
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: eAHA
    <400> SEQUENCE: 14
    Xaa Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 15
    <211> LENGTH: 6
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 15
    Xaa Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 16
    <211> LENGTH: 5
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 16
    Xaa Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 17
    <211> LENGTH: 5
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 17
    Val Ala Xaa Ser Xaa
    1 5
    <210> SEQ ID NO 18
    <211> LENGTH: 5
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 18
    Val Ala Xaa Ser Xaa
    1 5
    <210> SEQ ID NO 19
    <211> LENGTH: 5
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 19
    Val Ala Xaa Ser Xaa
    1 5
    <210> SEQ ID NO 20
    <211> LENGTH: 5
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 20
    Val Ala Xaa Ser Xaa
    1 5
    <210> SEQ ID NO 21
    <211> LENGTH: 5
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 21
    Val Ala Xaa Ser Xaa
    1 5
    <210> SEQ ID NO 22
    <211> LENGTH: 5
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 22
    Val Ala Xaa Ser Xaa
    1 5
    <210> SEQ ID NO 23
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 23
    Xaa Val Ala Lys Ser Xaa Asp
    1 5
    <210> SEQ ID NO 24
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 24
    Xaa Val Ala Gln Ser Xaa Asp
    1 5
    <210> SEQ ID NO 25
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 25
    Xaa Val Ala Thr Ser Xaa Asp
    1 5
    <210> SEQ ID NO 26
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 26
    Xaa Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 27
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: Cha
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 27
    Xaa Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 28
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 28
    Xaa Val Ala His Ser Xaa Asp
    1 5
    <210> SEQ ID NO 29
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: ACH
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 29
    Xaa Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 30
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: DNle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 30
    Xaa Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 31
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: 3pyr
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 31
    Xaa Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 32
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: Hyp
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 32
    Xaa Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 33
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: ACP
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 33
    Xaa Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 34
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 34
    Xaa Val Lys Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 35
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: DAla
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 35
    Xaa Val Xaa Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 36
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: Tic
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 36
    Xaa Val Xaa Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 37
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: ACH
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 37
    Xaa Val Xaa Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 38
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: Met(O)
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 38
    Xaa Val Xaa Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 39
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: 2Nal
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 39
    Xaa Val Xaa Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 40
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: ACP
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 40
    Xaa Val Xaa Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 41
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: DLys
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 41
    Xaa Val Xaa Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 42
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: DGln
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 42
    Xaa Val Xaa Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 43
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: 3pyr
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 43
    Xaa Val Xaa Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 44
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: Cha
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 44
    Xaa Val Xaa Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 45
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: DVal
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 45
    Xaa Xaa Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 46
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 46
    Xaa Gln Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 47
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 47
    Xaa Lys Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 48
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: Tic
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 48
    Xaa Xaa Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 49
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: ACH
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 49
    Xaa Xaa Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 50
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: Met(O)
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 50
    Xaa Xaa Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 51
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: 3pyr
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 51
    Xaa Xaa Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 52
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: 2Nal
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 52
    Xaa Xaa Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 53
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 53
    Xaa Leu Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 54
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: Cha
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 54
    Xaa Xaa Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 55
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: Bip
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 55
    Xaa Xaa Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 56
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: Bip
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 56
    Xaa Xaa Ala Xaa Tyr Xaa Asp
    1 5
    <210> SEQ ID NO 57
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: Bip
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 57
    Xaa Xaa Ala Xaa Leu Xaa Asp
    1 5
    <210> SEQ ID NO 58
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: Bip
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 58
    Xaa Xaa Ala Xaa Lys Xaa Asp
    1 5
    <210> SEQ ID NO 59
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: Bip
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 59
    Xaa Xaa Ala Xaa Asp Xaa Asp
    1 5
    <210> SEQ ID NO 60
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: Bip
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Abu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 60
    Xaa Xaa Ala Xaa Xaa Xaa Asp
    1 5
    <210> SEQ ID NO 61
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: Bip
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Cha
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 61
    Xaa Xaa Ala Xaa Xaa Xaa Asp
    1 5
    <210> SEQ ID NO 62
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: Bip
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Met(O)
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 62
    Xaa Xaa Ala Xaa Xaa Xaa Asp
    1 5
    <210> SEQ ID NO 63
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: Bip
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 63
    Xaa Xaa Ala Xaa Thr Xaa Asp
    1 5
    <210> SEQ ID NO 64
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: Bip
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: 3pyr
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 64
    Xaa Xaa Ala Xaa Xaa Xaa Asp
    1 5
    <210> SEQ ID NO 65
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: Bip
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: BuGly
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 65
    Xaa Xaa Ala Xaa Xaa Xaa Asp
    1 5
    <210> SEQ ID NO 66
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: Bip
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: hLeu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Hyp
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 66
    Xaa Xaa Ala Xaa Xaa Xaa Asp
    1 5
    <210> SEQ ID NO 67
    <211> LENGTH: 8
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (7)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 67
    Xaa Phe Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 68
    <211> LENGTH: 8
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: 3.Pyr
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (7)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 68
    Xaa Xaa Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 69
    <211> LENGTH: 8
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: 1.Naph
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (7)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 69
    Xaa Xaa Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 70
    <211> LENGTH: 8
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: 2.Naph
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (7)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 70
    Xaa Xaa Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 71
    <211> LENGTH: 8
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (7)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 71
    Xaa Tyr Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 72
    <211> LENGTH: 8
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: Bip
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (7)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 72
    Xaa Xaa Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 73
    <211> LENGTH: 8
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (7)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 73
    Xaa Lys Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 74
    <211> LENGTH: 8
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (7)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 74
    Xaa Glu Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 75
    <211> LENGTH: 8
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (7)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 75
    Xaa Leu Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 76
    <211> LENGTH: 8
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: Hyp
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (7)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 76
    Xaa Xaa Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 77
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: (NMe)Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 77
    Xaa Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 78
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: (NMe)Ala
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 78
    Xaa Val Xaa Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 79
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: Aib
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 79
    Xaa Val Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 80
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: Aib
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 80
    Xaa Val Xaa Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 81
    <211> LENGTH: 7
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: Deg
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 81
    Xaa Xaa Ala Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 82
    <211> LENGTH: 6
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: nBu
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: D.Ser
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: D.Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: D.Ala
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: D.Val
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: p.Aba
    <400> SEQUENCE: 82
    Xaa Xaa Xaa Xaa Xaa Xaa
    1 5
    <210> SEQ ID NO 83
    <211> LENGTH: 6
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Bz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: Statine
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (6)
    <223> OTHER INFORMATION: eAha
    <400> SEQUENCE: 83
    Xaa Val Ala Xaa Ser Xaa
    1 5
    <210> SEQ ID NO 84
    <211> LENGTH: 6
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: p.Aba
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 84
    Xaa Xaa Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 85
    <211> LENGTH: 6
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Abz
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (2)
    <223> OTHER INFORMATION: Cmpi
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (3)
    <223> OTHER INFORMATION: Nle
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: Tyr(NO2)
    <400> SEQUENCE: 85
    Xaa Xaa Xaa Ser Xaa Asp
    1 5
    <210> SEQ ID NO 86
    <211> LENGTH: 4
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: N-Benzoyl
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: L-norleucine
    <400> SEQUENCE: 86
    Xaa Val Ala Xaa
    1
    <210> SEQ ID NO 87
    <211> LENGTH: 4
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: N-Benzoyl
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: L-norleucine bromomethyl ketone
    <400> SEQUENCE: 87
    Xaa Val Ala Xaa
    1
    <210> SEQ ID NO 88
    <211> LENGTH: 4
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: N-Benzoyl
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: L-norleucine 2, 6-bis (trifluoromethyl)
    benzoyloxymethyl ketone
    <400> SEQUENCE: 88
    Xaa Val Ala Xaa
    1
    <210> SEQ ID NO 89
    <211> LENGTH: 4
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: N-Benzoyl
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: L-norleucine 2, 6-dimethylbenzoyloxymethyl
    ketone
    <400> SEQUENCE: 89
    Xaa Val Ala Xaa
    1
    <210> SEQ ID NO 90
    <211> LENGTH: 4
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: N-Benzoyl
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: L-norleucine 2-hydroxybenzoyloxymethyl ketone
    <400> SEQUENCE: 90
    Xaa Val Ala Xaa
    1
    <210> SEQ ID NO 91
    <211> LENGTH: 4
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: N-Benzoyl
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: L-norleucine 2, 6-dichlorobenzoyloxymethyl
    ketone
    <400> SEQUENCE: 91
    Xaa Val Ala Xaa
    1
    <210> SEQ ID NO 92
    <211> LENGTH: 4
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: N-Benzoyl
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: L-norleucine benzoyloxymethyl ketone
    <400> SEQUENCE: 92
    Xaa Val Ala Xaa
    1
    <210> SEQ ID NO 93
    <211> LENGTH: 4
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: N-Benzoyl
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: L-norleucine 2, 3, 4, 5,
    6-pentafluorobenzoyloxymethyl ketone
    <400> SEQUENCE: 93
    Xaa Val Ala Xaa
    1
    <210> SEQ ID NO 94
    <211> LENGTH: 4
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: N-Benzoyl
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: L-norleucine 1, 1-dimethylpropyloxymethyl
    ketone
    <400> SEQUENCE: 94
    Xaa Val Ala Xaa
    1
    <210> SEQ ID NO 95
    <211> LENGTH: 5
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: N-Benzoyl
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: L-norleucine
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: N(-benxyloxycarbonyl)-D-serinyl
    -(0-tert-butyl) oxymethyl ketone
    <400> SEQUENCE: 95
    Xaa Val Ala Xaa Xaa
    1 5
    <210> SEQ ID NO 96
    <211> LENGTH: 5
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: N-Benzoyl
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: L-norleucine
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: N(-benxyloxycarbonyl)-D-serineoxy
    methyl ketone
    <400> SEQUENCE: 96
    Xaa Val Ala Xaa Xaa
    1 5
    <210> SEQ ID NO 97
    <211> LENGTH: 5
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: N-Benzoyl
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: L-norleucine
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (5)
    <223> OTHER INFORMATION: 2-furanoxy methyl ketone
    <400> SEQUENCE: 97
    Xaa Val Ala Xaa Xaa
    1 5
    <210> SEQ ID NO 98
    <211> LENGTH: 4
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: N-Benzoyl
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: L-norleucine 2, 6-dichlorophenylacyloxy
    methyl ketone
    <400> SEQUENCE: 98
    Xaa Val Ala Xaa
    1
    <210> SEQ ID NO 99
    <211> LENGTH: 4
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Ethyl-(S)-(E)-3-(tert-butoxy carbonyl)
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: amino-6-methyl-hept-2-enoate
    <400> SEQUENCE: 99
    Xaa Val Ala Xaa
    1
    <210> SEQ ID NO 100
    <211> LENGTH: 4
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: (S)-(E)-3-(tert-butoxy carbonyl)
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: amino-6-methyl-hept-2-enoic acid
    <400> SEQUENCE: 100
    Xaa Val Ala Xaa
    1
    <210> SEQ ID NO 101
    <211> LENGTH: 4
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: 1,1,1-Trifluoroethyl-(S)-(E)-3-(tert-butoxy
    carbonyl)
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: amino-6-methyl-hept-2-enoate
    <400> SEQUENCE: 101
    Xaa Val Ala Xaa
    1
    <210> SEQ ID NO 102
    <211> LENGTH: 4
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Ethyl-(S)-(E)-3-(N-benzoyl)
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: amino-6-methyl-hept-2-enoate
    <400> SEQUENCE: 102
    Xaa Val Ala Xaa
    1
    <210> SEQ ID NO 103
    <211> LENGTH: 4
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: (S)-(E)-3-(tert-butoxycarbonylamino)
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: amino-1-phenylsulfonyl-5-methyl-1-hexene
    <400> SEQUENCE: 103
    Xaa Val Ala Xaa
    1
    <210> SEQ ID NO 104
    <211> LENGTH: 4
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: (S)-(E)-3-(tert-butoxycarbonylamino)
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: amino-1-methylsulfonyl-5-methyl-1-hexene
    <400> SEQUENCE: 104
    Xaa Val Ala Xaa
    1
    SEQ ID NO 105
    LENGTH: 4
    <212> TYPE: PRT
    <213> ORGANISM: Artificial Sequence
    <220> FEATURE:
    <223> OTHER INFORMATION: Description of Artificial Sequence: Synthetic
    peptide
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (1)
    <223> OTHER INFORMATION: Diethyl(S)-(E)-3-(tert-butoxycarbonylamino)
    <220> FEATURE:
    <221> NAME/KEY: MOD_RES
    <222> LOCATION: (4)
    <223> OTHER INFORMATION: amino-5-methylhexenylsulfonate
    <400> SEQUENCE: 105
    Xaa Val Ala Xaa
    1

Claims (28)

1. A complementary pair of compound libraries L1 and L2 which constitute a set containing combinatorial FRET compounds of formula:
Aa-Bb-Cc-Dd-n(Ee)-Ff-Gg
in which;
A represents a fluorescor internally quenched by F;
B, C, D, and E represent groups such that the scissile bond between any two of these groups is a suitable bond;
F represents a quencher capable of internally quenching the fluorescor A; and wherein all compounds are in aqueous solution; and
n represents an interger between 1 and 4 inclusive;
giving a×b×c×d×e×f×g=Mn compounds in each library, there being a predetermined number (P1, P2) of mixtures each consisting of a predetermined number (Q1, Q2) of individual identifiable compounds in each library, wherein both L1 and L2 contain the same Mn compounds, but wherein any two compounds which are found together in one mixture of Q1 compounds of L1 are not found together in any one of the P2 mixtures of L2.
2. A method of screening for enzymic activity, wherein the activity is the interaction of proteolytic enzyme applied to a well with one or more compounds of a mixture in the well, using the libraries L1, L2 according to claim 1, in which the P1 mixtures of L1 and the P2 mixtures of L2 are each placed separately into individual wells of well plates, the well plates having wells arranged in a format adapted to allow deduction of a unique active compound formula from the presence of activity in one well of L1 and one well of L2.
3. A method according to claim 2 wherein the format complies with general deconvolution formulae in which:
( i ) n s = Rp · Cp · Rs · Cs N p
Figure US20030092067A1-20030515-M00003
(ii) k=b.c.d.np.e (iii) k=x.N.np (iv) N=Rp.Cp (v) K=X.Rp.Cp.np (vi) b.c.d.e=X.Rp.Cp (vii) Cp.e=X (viii) Rp.e=X, if Rp=Cp
and wherein
np=number of primary plates
ns=number of secondary plates
Rp=number of primary rows
Rs=number of secondary rows
Cp=number of primary columns
Cs=number of secondary columns
K=number of combinations of compounds
N=number of wells on a plate, and
x=number of compounds per well.
4. A method according to claim 3 wherein
n=4
ns=16
Rp=8
Rs=4
Cp=10
Cs=5
K=6400
N=80
x=20
5. A library pair according to claim 1 wherein the scissile bond is between D and E.
6. A library pair according to claim 1 wherein A represents an unsubstituted or substituted anthranilic acid derivative.
7. A library pair according to claim 1 wherein B, C, D and E independently represent natural or unnatural amino acid residues.
8. A library pair according to claim 1 wherein F represents an unsubstituted or substituted 3-nitrotyrosine derivative.
9. A library pair according to claim 1 wherein the scissile bond is a suitable bond selected from the group consisting of an unsubstituted amide bond, and an ester bond.
10. A library pair according to claim 1 wherein the formula further comprises G which ensures the compound is imparted with aqueous solubility.
11. A library pair according to claim 10 which is represented by the formula A-B-C-D-n(E)-F-G in which A, B, C, D, E, F and n are as defined in claim 1; and G represents a hydrophilic moiety which is not an enzyme substrate.
12. A library pair according to claim 10 or 11 of general formula:
Abz-B-C-D-E-Tyr(NO2)-Asp-NH2
Where
B=Valine>Alanine, Glutamine, Leucine, Phenylalanine
C=Alanine>>Glutamine, or Lysine.
D=Leucine, Norleucine or Alanine>Serine
E=Serine
13. Apparatus which comprises an auto-deconvoluting set of compounds according to claim 1 that facilitates the invention of novel inhibitors of proteolytic enzymes and the rapid generation of structure-activity relationships (SAR) by the detection and measurement of proteolytic enzyme activity.
14. Apparatus according to claims 13 wherein each library comprises a mixture of compounds represented by the formula:
A-B1-10-C1-10-D1-8-n (E1-2)-F.
15. Apparatus according to claim 14 wherein the formula further comprises G which ensures that compounds in the library are imparted with aqueous solubility.
16. Apparatus according to claim 15 wherein each library comprises a mixture of compounds represented by the formula:
A-B1-10-C1-10-D1-8-n (E1-2)-F-G
in which;
G represents a hydrophilic moiety which is not an enzyme substrate.
17. Apparatus according to claim 15 or 16 in which G represents an aspartyl amide moiety.
18. Apparatus according to any one of claims 13 to 17 wherein the library comprises 1600n compounds as 80n mixtures of 20 distinct, identifiable compounds.
19. Apparatus according to claim 18 wherein the mixtures of 20 distinct, identifiable compounds are placed separately into each of 80 wells of an microtitre plate.
20. Use of a combinatorial FRET library pair according to claim 1 in a method which provides rapid generation of structure-activity relationships (SAR) which comprises detection and measurement of proteolytic enzyme activity by carrying out an assay with a library pair of combinatorial FRET (fluorescence resonance energy transfer) molecules to find a substrate or substrates for the enzyme.
21. Use of a combinatorial FRET library pair according to claim 1 in a method for detection and measurement of proteolytic enzyme activity against compounds of the library.
22. A method of identifying and synthesising an inhibitor of a proteolytic enzyme which comprises detection and measurement of proteolytic enzyme activity by carrying out an assay with a library pair of combinatorial FRET (fluorescence resonance energy transfer) molecules according to claim 1, deconvoluting the library to find a substrate or substrates for the enzyme and synthesis of an inhibitor based on the substrate or substrates.
23. An inhibition assay which uses a FRET molecule, which has been identified as a substrate for the enzyme by the method of claim 2, wherein the molecule is assayed with the enzyme separately against a panel of possible inhibitors.
24. A method which provides the rapid generation of structure-activity relationships (SAR) which comprises detection and measurement of proteolytic enzyme activity by carrying out an assay with a library pair of combinatorial FRET (fluorescence resonance energy transfer) molecules according to claim 1 to find a substrate or substrates for the enzyme.
25. A method which comprises the identification of an enzyme inhibitor or inhibitors wherein a FRET compound which has been identified as a substrate by the method of claim 2 is used in an inhibition assay with the enzyme separately against a panel of possible inhibitors.
26. A method according to claim 25 wherein the assay is performed by using the apparatus according to any of claims 13 to 19.
27. A method according to any preceding method claim wherein the compounds of the library pair are synthesized using a solid phase technique.
28. A library pair, apparatus, method or assay substantially as described herein with reference to example 1.
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Families Citing this family (28)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6149869A (en) * 1996-10-23 2000-11-21 Glaxo Wellcome Inc. Chemical synthesizers
US6042789A (en) * 1996-10-23 2000-03-28 Glaxo Group Limited System for parallel synthesis of organic compounds
US6617114B1 (en) 1996-10-31 2003-09-09 Karo Bio Ab Identification of drug complementary combinatorial libraries
EP0937253A1 (en) * 1996-10-31 1999-08-25 Novalon Pharmaceutical Corporation Identification of drugs using complementary combinatorial libraries
US6054325A (en) * 1996-12-02 2000-04-25 Glaxo Wellcom Inc. Method and apparatus for transferring and combining distinct chemical compositions with reagents
US6083761A (en) * 1996-12-02 2000-07-04 Glaxo Wellcome Inc. Method and apparatus for transferring and combining reagents
GB9722818D0 (en) * 1997-10-30 1997-12-24 Peptide Therapeutics Ltd A method for mapping the active sites bound by enzymes that covalently modify substrate molecules
CA2311490A1 (en) * 1997-11-26 1999-06-03 Tony Johnson A solid-phase technology for the preparation of combinatorial libraries through amide-bond anchoring
US6083682A (en) 1997-12-19 2000-07-04 Glaxo Group Limited System and method for solid-phase parallel synthesis of a combinatorial collection of compounds
MY153569A (en) 1998-01-20 2015-02-27 Mitsubishi Tanabe Pharma Corp Inhibitors of ?4 mediated cell adhesion
US6569636B2 (en) 1998-05-29 2003-05-27 Hawaii Biotechnology Group, Inc. Assay for modulators of metallo-enzyme activity
DE19925402C2 (en) * 1999-06-02 2001-12-20 Molecular Machines & Ind Gmbh Screening of target-ligand interactions
WO2001059149A2 (en) * 2000-02-11 2001-08-16 Cellomics, Inc. Peptide biosensors for anthrax protease
JP2002250730A (en) * 2001-02-27 2002-09-06 Shinwa Kako Kk Molecule sensor and its producing method
MY140707A (en) 2002-02-28 2010-01-15 Mitsubishi Tanabe Pharma Corp Process for preparing a phenylalanine derivative and intermediates thereof
US7122580B2 (en) * 2002-08-09 2006-10-17 Transtech Pharma, Inc. Aryl and heteroaryl compounds and methods to modulate coagulation
US7459472B2 (en) * 2003-08-08 2008-12-02 Transtech Pharma, Inc. Aryl and heteroaryl compounds, compositions, and methods of use
US7208601B2 (en) 2003-08-08 2007-04-24 Mjalli Adnan M M Aryl and heteroaryl compounds, compositions, and methods of use
US8015064B2 (en) * 2005-04-20 2011-09-06 At&T Intellectual Property I, Lp System and method of providing advertisements to cellular devices
JP2009502158A (en) * 2005-07-26 2009-01-29 カウンシル オブ サイエンティフィック アンド インダストリアル リサーチ Methods for identifying genes that increase stress tolerance in yeast and their use for yeast strain improvement
WO2010052244A1 (en) 2008-11-05 2010-05-14 Morphosys Ag Deconvolution method
WO2010059051A2 (en) * 2008-11-20 2010-05-27 Nederlandse Organisatie Voor Toegepast-Natuurwetenschappelijk Onderzoek Tno Rapid fret based pathogen diagnosis
EP2189536A1 (en) * 2008-11-20 2010-05-26 Nederlandse Organisatie voor toegepast-natuurwetenschappelijk Onderzoek TNO Rapid FRET based anthrax diagnosis
BR112014017095A2 (en) 2012-01-12 2017-06-13 Yale University compound, pharmaceutical composition, method for regulating protein activity of a target protein, method for treating a disease state or condition, library of a compound, method for degrading a target protein, and use of a compound
GB201311891D0 (en) 2013-07-03 2013-08-14 Glaxosmithkline Ip Dev Ltd Novel compound
GB201311888D0 (en) 2013-07-03 2013-08-14 Glaxosmithkline Ip Dev Ltd Novel compounds
US20180228907A1 (en) 2014-04-14 2018-08-16 Arvinas, Inc. Cereblon ligands and bifunctional compounds comprising the same
AU2016349781A1 (en) 2015-11-02 2018-05-10 Yale University Proteolysis targeting chimera compounds and methods of preparing and using same

Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5011910A (en) * 1989-12-28 1991-04-30 Washington University Reagent and method for determining activity of retroviral protease
US5164300A (en) * 1989-12-28 1992-11-17 Washington University Method for determining activity of retroviral protease
US5506115A (en) * 1994-04-29 1996-04-09 G. D. Searle & Co. Reagent and method for determining activity of herpes protease
US20040062911A1 (en) * 2002-09-27 2004-04-01 Lauf Robert J. Combinatorial synthesis of ceramic materials

Family Cites Families (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP0428000A1 (en) 1989-11-03 1991-05-22 Abbott Laboratories Fluorogenic substrates for the detection of proteolytic enzyme activity
DK93990D0 (en) * 1990-04-17 1990-04-17 Carlsberg As FLUOROGENEOUS PEPTIDES AND THEIR USE IN DETERMINING ENZYMATIC ACTIVITY
HU9201687D0 (en) 1992-05-21 1992-08-28 Arpad Furka Preparation of sets from peptid mixtures with polycomponents and their use for the identification of biologically active peptides
US5585275A (en) 1992-09-02 1996-12-17 Arris Pharmaceutical Corporation Pilot apparatus for peptide synthesis and screening
SG48166A1 (en) 1993-12-15 1998-04-17 Conbichem Inc Combinatorial libraries and methods for their use
US5738996A (en) * 1994-06-15 1998-04-14 Pence, Inc. Combinational library composition and method
WO1997025437A1 (en) * 1996-01-04 1997-07-17 Nederlandse Organisatie Voor Toegepast-Natuurwetenschappelijk Onderzoek Tno Method for assaying proteolytic enzymes using fluorescence-quenched substrates

Patent Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5011910A (en) * 1989-12-28 1991-04-30 Washington University Reagent and method for determining activity of retroviral protease
US5164300A (en) * 1989-12-28 1992-11-17 Washington University Method for determining activity of retroviral protease
US5506115A (en) * 1994-04-29 1996-04-09 G. D. Searle & Co. Reagent and method for determining activity of herpes protease
US20040062911A1 (en) * 2002-09-27 2004-04-01 Lauf Robert J. Combinatorial synthesis of ceramic materials

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