CN118772279A - Anti-FGFR2b antibody or antigen-binding fragment thereof and use thereof - Google Patents
Anti-FGFR2b antibody or antigen-binding fragment thereof and use thereof Download PDFInfo
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- CN118772279A CN118772279A CN202410857516.1A CN202410857516A CN118772279A CN 118772279 A CN118772279 A CN 118772279A CN 202410857516 A CN202410857516 A CN 202410857516A CN 118772279 A CN118772279 A CN 118772279A
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Abstract
Description
技术领域Technical Field
本公开涉及一种抗FGFR2b抗体或其抗原结合片段及其用途,具体涉及一种特异性靶向FGFR2b,能阻断配体FGF7诱导的细胞增殖,具有抗体依赖的细胞毒性(ADCC)作用的单克隆抗体,其在治疗FGFR2b基因过表达、配体作用的过度激活有关疾病及不良预后中有着潜在意义。The present disclosure relates to an anti-FGFR2b antibody or an antigen-binding fragment thereof and uses thereof, and in particular to a monoclonal antibody that specifically targets FGFR2b, can block cell proliferation induced by the ligand FGF7, and has antibody-dependent cellular cytotoxicity (ADCC) effect, and has potential significance in treating diseases related to FGFR2b gene overexpression, excessive activation of ligand action, and poor prognosis.
背景技术Background Art
纤维母细胞生长因子受体2b(Fibroblast Growth Factor Receptor 2b,简称FGFR2b),是受体酪氨酸激酶家族的一员FGFR2的同源异构体。FGFR2b和整个FGFR家族的受体一样在细胞膜上表达。整个受体由三个主要元素构成:(1)FGFR2胞外区,由3个Ig结构域组成(约355aa),FGFR2b或FGFR2c两种异构体由于选择性剪切形成,区别仅在于Ig III近膜端约30aa(也称IIIb或IIIc),胞外区用于与纤维母细胞生长因子(Fibroblast GrowthFactor,简称FGF)配体结合;(2)跨膜螺旋(Transmembrane Helix):单一的跨膜结构,将外细胞域连接到细胞内;(3)细胞内酪氨酸激酶结构域(Intracellular Tyrosine KinaseDomain),在信号传导中起关键作用,激活后可以磷酸化酪氨酸残基,触发下游信号通路。与配体FGF结合后,FGFRs二聚体形成导致结构的构象变化,激活细胞内激酶结构域,导致细胞内结构域的磷酸化。通过招募FRS2、SOS和GRB2信号分子,RAS和MAPK途径下游被激活。PI3K-mTOR-AKT和STAT3信号通路也被FGFR激活。FGFR2b是一种重要的信号传导受体,涉及多个细胞过程,包括细胞增殖、分化、迁移和存活。Fibroblast Growth Factor Receptor 2b (FGFR2b) is a homologous isomer of FGFR2, a member of the receptor tyrosine kinase family. FGFR2b is expressed on the cell membrane like the receptors of the entire FGFR family. The entire receptor is composed of three main elements: (1) FGFR2 extracellular region, which is composed of three Ig domains (about 355aa). The two isoforms FGFR2b or FGFR2c are formed due to selective splicing. The only difference is that the Ig III near the membrane end is about 30aa (also called IIIb or IIIc). The extracellular region is used to bind to the fibroblast growth factor (FGF) ligand; (2) Transmembrane helix: a single transmembrane structure that connects the extracellular domain to the cell; (3) Intracellular tyrosine kinase domain, which plays a key role in signal transduction. After activation, it can phosphorylate tyrosine residues and trigger downstream signaling pathways. After binding to the ligand FGF, FGFRs dimerize, resulting in conformational changes in the structure, activating the intracellular kinase domain, and leading to phosphorylation of the intracellular domain. By recruiting FRS2, SOS, and GRB2 signaling molecules, the downstream RAS and MAPK pathways are activated. The PI3K-mTOR-AKT and STAT3 signaling pathways are also activated by FGFR. FGFR2b is an important signaling receptor involved in multiple cellular processes, including cell proliferation, differentiation, migration, and survival.
在正常组织中,FGFR2b的表达支持多种生理过程,包括胚胎发育和组织修复。FGFR2b主要表达于上皮来源细胞,而FGFR2c主要表达于间充质细胞。然而,在各种癌症中都可发现FGFR2b表达的失调。FGFR2b的扩增、突变或过表达已在乳腺癌、胃癌和肺癌等多种恶性肿瘤中得到确认。FGFR2b表达的改变通常与肿瘤的增殖增强和不良预后相关。FGFR2b的过表达已在包括乳腺、子宫内膜、宫颈、肺、食管、胃、胰腺和结直肠癌的多种癌症中报道,但FGFR2b变体在不同癌症类型之间的作用存在争议。在食管癌患者中,41%的患者的食管癌细胞中表达了FGFR2b,并且FGFR2b的表达与食管癌的良性细胞类型相关。使用免疫组织化学(IHC)检测,发现73例(1974例中的4%)胃癌患者中FGFR2b蛋白过表达,并且所有具有FGFR2b过表达的肿瘤均通过荧光原位杂交检测到FGFR2扩增。并且,FGFR2b在胃癌中的表达尤为显著,在一项研究中,一种新型的FGFR2b初级抗体通过免疫组织化学来预测基因扩增,并发现4%的胃癌中存在FGFR2b过表达,其中92%的病例通过FISH确认为FGFR2基因扩增,证实这是FGFR2扩增的胃癌中主要表达的是FGFR2b亚型,而不是FGFR2c亚型。值得关注的是,随着FGFR2b表达水平的增加,观察到更大的生存获益,说明FGFR2b靶点或可作为临床中肿瘤疗效预测的指标。2019年Kim等人总结了从1996年到2018年期间的10项研究,共有4,294名患者被纳入了对FGFR2表达状态的病理特征的比值比(ORs)和95%置信区间(CIs)的汇总分析,以及对总生存率的风险比(HRs)和95% CIs的汇总分析。与低FGFR2表达的肿瘤相比,FGFR2过表达的胃癌显示出更深的侵袭深度(pT3-4)(OR=2.63,95% CI:1.70-4.06,p<0.0001)、更高的淋巴结转移率(OR=1.87,95% CI:1.31-2.67,p<0.0001)和更晚期的分期(III-IV)(OR=1.78,95% CI:1.07-2.96,p=0.03)。此外,FGFR2过表达的胃癌患者的生存率明显低于FGFR2低表达肿瘤的患者(HR=1.40,95% CI:1.25-1.58,p<0.00001)。总之,这项分析表明,FGFR2过表达与胃癌患者的不良病理特征和预后相关(J Cancer.2019Jan1;10(1):20-27)。In normal tissues, the expression of FGFR2b supports a variety of physiological processes, including embryonic development and tissue repair. FGFR2b is mainly expressed in cells of epithelial origin, while FGFR2c is mainly expressed in mesenchymal cells. However, dysregulation of FGFR2b expression can be found in various cancers. Amplification, mutation, or overexpression of FGFR2b has been confirmed in a variety of malignancies, including breast cancer, gastric cancer, and lung cancer. Alterations in FGFR2b expression are often associated with enhanced tumor proliferation and poor prognosis. Overexpression of FGFR2b has been reported in a variety of cancers, including breast, endometrial, cervical, lung, esophageal, gastric, pancreatic, and colorectal cancers, but the role of FGFR2b variants between different cancer types is controversial. In patients with esophageal cancer, FGFR2b was expressed in esophageal cancer cells in 41% of patients, and FGFR2b expression was associated with benign cell types in esophageal cancer. Using immunohistochemistry (IHC), it was found that FGFR2b protein was overexpressed in 73 patients (4% of 1974 cases) with gastric cancer, and all tumors with FGFR2b overexpression had FGFR2 amplification detected by fluorescence in situ hybridization. Moreover, the expression of FGFR2b in gastric cancer is particularly significant. In one study, a new FGFR2b primary antibody was used to predict gene amplification by immunohistochemistry, and FGFR2b overexpression was found in 4% of gastric cancers, of which 92% of cases were confirmed as FGFR2 gene amplification by FISH, confirming that this is FGFR2 amplified gastric cancer that mainly expresses the FGFR2b subtype, rather than the FGFR2c subtype. It is worth noting that with the increase in FGFR2b expression levels, a greater survival benefit was observed, indicating that the FGFR2b target may be used as an indicator for predicting tumor efficacy in clinical practice. In 2019, Kim et al. summarized 10 studies from 1996 to 2018, with a total of 4,294 patients included in the pooled analysis of odds ratios (ORs) and 95% confidence intervals (CIs) of pathological characteristics of FGFR2 expression status, as well as the pooled analysis of hazard ratios (HRs) and 95% CIs for overall survival. Compared with tumors with low FGFR2 expression, gastric cancer with FGFR2 overexpression showed deeper invasion depth (pT3-4) (OR = 2.63, 95% CI: 1.70-4.06, p < 0.0001), higher lymph node metastasis rate (OR = 1.87, 95% CI: 1.31-2.67, p < 0.0001) and more advanced stage (III-IV) (OR = 1.78, 95% CI: 1.07-2.96, p = 0.03). In addition, the survival rate of gastric cancer patients with FGFR2 overexpression was significantly lower than that of patients with FGFR2 low-expression tumors (HR = 1.40, 95% CI: 1.25-1.58, p < 0.00001). In summary, this analysis showed that FGFR2 overexpression was associated with adverse pathological features and prognosis in gastric cancer patients (J Cancer. 2019 Jan 1; 10 (1): 20-27).
综上所述,FGFR2b基因出现异常(扩增、突变或易位)导致基因的过表达、配体作用的过度激活与胃癌的发生发展及不良预后有正相关。FGFR2靶向药物根据作用机制可分为四类:(1)小分子酪氨酸激酶抑制剂(TKIs),包括非选择性和选择性的FGFR抑制剂;(2)对抗性单克隆抗体,竞争性结合到FGFR细胞外区域,阻止FGFs–FGFR信号的激活;(3)FGF配体陷阱,阻止多种FGF配体的活性和配体-受体相互作用;以及(4)抗体-药物结合物(ADCs),由FGFR抗体与细胞毒性荷载组成。In summary, abnormalities in the FGFR2b gene (amplification, mutation, or translocation) lead to gene overexpression and excessive activation of ligand action, which are positively correlated with the occurrence, development, and poor prognosis of gastric cancer. FGFR2 targeted drugs can be divided into four categories based on their mechanism of action: (1) small molecule tyrosine kinase inhibitors (TKIs), including non-selective and selective FGFR inhibitors; (2) antagonistic monoclonal antibodies, which competitively bind to the extracellular region of FGFR and prevent the activation of FGFs–FGFR signaling; (3) FGF ligand traps, which prevent the activity of multiple FGF ligands and ligand-receptor interactions; and (4) antibody-drug conjugates (ADCs), which are composed of FGFR antibodies and cytotoxic loads.
发明内容Summary of the invention
一方面,本公开提供了一种纤维母细胞生长因子受体2b(FGFR2b)的抗体或其抗原结合片段,其包含重链可变区和轻链可变区,所述重链可变区和轻链可变区的CDR组合物为:由氨基酸序列SEQ ID NO:1构成的重链CDR1,由氨基酸序列SEQ ID NO:15构成的重链CDR2,由氨基酸序列SEQ ID NO:3构成的重链CDR3,以及由氨基酸序列SEQ ID NO:6构成的轻链CDR1,由氨基酸序列SEQ ID NO:7构成的轻链CDR2,由氨基酸序列SEQ ID NO:20构成的轻链CDR3。On the one hand, the present disclosure provides an antibody or an antigen-binding fragment thereof of fibroblast growth factor receptor 2b (FGFR2b), which comprises a heavy chain variable region and a light chain variable region, wherein the CDR composition of the heavy chain variable region and the light chain variable region is: a heavy chain CDR1 consisting of the amino acid sequence SEQ ID NO:1, a heavy chain CDR2 consisting of the amino acid sequence SEQ ID NO:15, a heavy chain CDR3 consisting of the amino acid sequence SEQ ID NO:3, and a light chain CDR1 consisting of the amino acid sequence SEQ ID NO:6, a light chain CDR2 consisting of the amino acid sequence SEQ ID NO:7, and a light chain CDR3 consisting of the amino acid sequence SEQ ID NO:20.
在一些实施方式中,前述的抗体或其抗原结合片段具有下列的重链可变区和轻链可变区的组合:In some embodiments, the aforementioned antibody or antigen-binding fragment thereof has the following combination of heavy chain variable region and light chain variable region:
所述重链可变区包含SEQ ID NO.16所示氨基酸序列或与其具有至少80%、85%、90%、95%、96%、97%、98%或99%或以上同一性的氨基酸序列,和所述轻链可变区包含SEQ ID NO.21所示氨基酸序列或与其具有至少80%、85%、90%、95%、96%、97%、98%或99%以上同一性的氨基酸序列。The heavy chain variable region comprises the amino acid sequence shown in SEQ ID NO.16 or an amino acid sequence that is at least 80%, 85%, 90%, 95%, 96%, 97%, 98% or 99% or more identical thereto, and the light chain variable region comprises the amino acid sequence shown in SEQ ID NO.21 or an amino acid sequence that is at least 80%, 85%, 90%, 95%, 96%, 97%, 98% or 99% or more identical thereto.
在一些实施方式中,前述的抗体是IgG1、IgG2、IgG3或IgG4型抗体。In some embodiments, the aforementioned antibody is an IgG1, IgG2, IgG3 or IgG4 antibody.
在一些优选的实施方式中,所述重链包含SEQ ID NO.18所示氨基酸序列或与其具有至少80%、85%、90%、95%、96%、97%、98%或99%以上同一性的氨基酸序列;In some preferred embodiments, the heavy chain comprises the amino acid sequence shown in SEQ ID NO. 18 or an amino acid sequence having at least 80%, 85%, 90%, 95%, 96%, 97%, 98% or 99% identity thereto;
在一些优选的实施方式中,所述轻链包含与SEQ ID NO.23所示氨基酸序列或与其具有至少80%、85%、90%、95%、96%、97%、98%或99%以上同一性的氨基酸序列。In some preferred embodiments, the light chain comprises an amino acid sequence shown in SEQ ID NO. 23 or an amino acid sequence that is at least 80%, 85%, 90%, 95%, 96%, 97%, 98% or 99% identical thereto.
另一方面,本公开提供了编码前述的抗体或其抗原结合片段的核酸。In another aspect, the present disclosure provides a nucleic acid encoding the aforementioned antibody or antigen-binding fragment thereof.
在一些优选的实施方式中,前述核酸具有SEQ ID NO.17或其任何变体的抗体重链可变区编码核苷酸序列,和SEQ ID NO.22或其任何变体的抗体轻链可变区编码核苷酸序列。其中,所述任何变体优选与SEQ ID NO.17和/或SEQ ID NO.22具有至少80%、85%、90%、95%、96%、97%、98%或99%以上同一性的核苷酸序列。In some preferred embodiments, the aforementioned nucleic acid has a nucleotide sequence encoding an antibody heavy chain variable region of SEQ ID NO.17 or any variant thereof, and a nucleotide sequence encoding an antibody light chain variable region of SEQ ID NO.22 or any variant thereof. Wherein, any of the variants preferably have a nucleotide sequence that is at least 80%, 85%, 90%, 95%, 96%, 97%, 98% or 99% identical to SEQ ID NO.17 and/or SEQ ID NO.22.
在一些优选的实施方式中,前述核酸具有SEQ ID NO.19或其任何变体的抗体重链编码核苷酸序列,和SEQ ID NO.24或其任何变体的抗体轻链编码核苷酸序列。其中,所述任何变体优选与SEQ ID NO.19和/或SEQ ID NO.24具有至少80%、85%、90%、95%、96%、97%、98%或99%以上同一性的核苷酸序列。In some preferred embodiments, the aforementioned nucleic acid has an antibody heavy chain encoding nucleotide sequence of SEQ ID NO.19 or any variant thereof, and an antibody light chain encoding nucleotide sequence of SEQ ID NO.24 or any variant thereof. Wherein, any of the variants preferably have a nucleotide sequence that is at least 80%, 85%, 90%, 95%, 96%, 97%, 98% or 99% identical to SEQ ID NO.19 and/or SEQ ID NO.24.
另一方面,本公开提供了前述核酸的载体。In another aspect, the present disclosure provides a vector of the aforementioned nucleic acid.
另一方面,本公开提供了前述核酸载体的宿主细胞。In another aspect, the present disclosure provides a host cell for the aforementioned nucleic acid vector.
另一方面,本公开提供了一种药物组合物或药物组合,其包含前述的抗体或其抗原结合片段、核酸、载体和/或细胞。On the other hand, the present disclosure provides a pharmaceutical composition or pharmaceutical combination comprising the aforementioned antibody or antigen-binding fragment thereof, nucleic acid, vector and/or cell.
在一些实施方式中,所述组合物或药物组合还包括第二治疗剂。In some embodiments, the composition or pharmaceutical combination further comprises a second therapeutic agent.
在一些优选的实施方式中,所述第二治疗剂选自β-2肾上腺素受体激动剂(SABA)、抗胆碱能药、肾上腺素能激动剂、糖皮质激素、长效β-2肾上腺素受体激动剂(LABA)、白三烯拮抗剂和肥大细胞稳定剂。In some preferred embodiments, the second therapeutic agent is selected from beta-2 adrenergic receptor agonists (SABAs), anticholinergics, adrenergic agonists, glucocorticoids, long-acting beta-2 adrenergic receptor agonists (LABAs), leukotriene antagonists, and mast cell stabilizers.
另一方面,本公开提供了一种生成前述的抗体或其抗原结合片段的方法,该方法包括培养前述的核酸或表达载体的宿主细胞。In another aspect, the present disclosure provides a method for producing the aforementioned antibody or antigen-binding fragment thereof, the method comprising culturing a host cell containing the aforementioned nucleic acid or expression vector.
另一方面,本公开提供了前述抗体或其抗原结合片段、核酸、载体、宿主细胞或药物组合物或药物组合用于制备检测、治疗、预防和/或减轻与表达FGFR2b相关的疾病的药物或试剂盒中的用途。On the other hand, the present disclosure provides the use of the aforementioned antibodies or antigen-binding fragments thereof, nucleic acids, vectors, host cells or pharmaceutical compositions or drug combinations for preparing drugs or kits for detecting, treating, preventing and/or alleviating diseases associated with the expression of FGFR2b.
在一些优选的实施方式中,所述与表达FGFR2b相关的疾病是肿瘤。In some preferred embodiments, the disease associated with the expression of FGFR2b is a tumor.
在一些更优选的实施方式中,所述与表达FGFR2b相关的是胃癌。In some more preferred embodiments, the cancer associated with the expression of FGFR2b is gastric cancer.
本公开提供的人源化抗体h21G4 H4K3能特异性结合人、食蟹猴和大鼠FGFR2b,不结合人FGFR2c,且具有阻断FGF7诱导的细胞增殖活性,分子本身具有ADCC活性。The humanized antibody h21G4 H4K3 provided by the present disclosure can specifically bind to human, cynomolgus monkey and rat FGFR2b, does not bind to human FGFR2c, and has the activity of blocking FGF7-induced cell proliferation, and the molecule itself has ADCC activity.
附图说明BRIEF DESCRIPTION OF THE DRAWINGS
此处的附图被并入说明书中并构成本说明书的一部分,示出了符合本说明书的实施例,并与说明书一起用于解释本说明书的原理。The accompanying drawings, which are incorporated in and constitute a part of this specification, illustrate embodiments consistent with the specification and, together with the description, serve to explain the principles of the specification.
图1示出了原核表达的人、食蟹猴、大鼠FGFR2b和人FGFR2c蛋白的SDS-PAGE结果。FIG1 shows the SDS-PAGE results of prokaryotically expressed human, cynomolgus monkey, rat FGFR2b and human FGFR2c proteins.
图2示出了嵌合抗体21G4与人FGFR2b蛋白的结合。FIG2 shows the binding of chimeric antibody 21G4 to human FGFR2b protein.
图3示出了嵌合抗体21G4与食蟹猴(图3-A)、大鼠(图3-B)FGFR2b蛋白的结合情况。FIG3 shows the binding of chimeric antibody 21G4 to FGFR2b proteins of cynomolgus monkey ( FIG3-A ) and rat ( FIG3-B ).
图4示出了嵌合抗体21G4与表达人FGFR2b细胞的结合情况。FIG4 shows the binding of chimeric antibody 21G4 to cells expressing human FGFR2b.
图5示出了示出了嵌合抗体21G4与食蟹猴(图5-A)、大鼠(图5-B)FGFR2b细胞的结合情况。FIG5 shows the binding of the chimeric antibody 21G4 to FGFR2b cells of cynomolgus monkeys ( FIG5-A ) and rats ( FIG5-B ).
图6示出了嵌合抗体21G4对FGF7/FGFR2b结合的阻断。FIG6 shows the blocking of FGF7/FGFR2b binding by the chimeric antibody 21G4.
图7示出了嵌合抗体21G4对FGF7诱导细胞增殖的抑制。FIG. 7 shows the inhibition of FGF7-induced cell proliferation by chimeric antibody 21G4.
图8示出了嵌合抗体21G4对FGF10/FGFR2b(图8-A)和FGF23/FGFR2c(图8-B)结合的作用。FIG8 shows the effect of chimeric antibody 21G4 on FGF10/FGFR2b ( FIG8-A ) and FGF23/FGFR2c ( FIG8-B ) binding.
图9示出了嵌合抗体21G4对FGF10诱导细胞增殖的阻断。FIG. 9 shows the blocking effect of chimeric antibody 21G4 on FGF10-induced cell proliferation.
图10示出了嵌合抗体21G4的结合特异性。FIG. 10 shows the binding specificity of the chimeric antibody 21G4.
图11示出了嵌合抗体21G4与FGFR2b亲和力。FIG. 11 shows the affinity of chimeric antibody 21G4 to FGFR2b.
图12示出了人源化抗体h21G4 H4K3与人FGFR2b抗原(图12-A)、食蟹猴FGFR2b抗原(图12-B)、大鼠FGFR2b抗原(图12-C)和人FGFR2c(图12-D)抗原的结合情况.FIG12 shows the binding of the humanized antibody h21G4 H4K3 to human FGFR2b antigen ( FIG12-A ), cynomolgus monkey FGFR2b antigen ( FIG12-B ), rat FGFR2b antigen ( FIG12-C ), and human FGFR2c antigen ( FIG12-D ).
图13示出了人源化抗体h21G4 H4K3与表达FGFR2b细胞的结合情况。FIG. 13 shows the binding of humanized antibody h21G4 H4K3 to cells expressing FGFR2b.
图14示出了人源化抗体h21G4 H4K3阻断FGF7诱导的细胞增殖作用。FIG. 14 shows that humanized antibody h21G4 H4K3 blocks FGF7-induced cell proliferation.
图15示出了人源化抗体h21G4 H4K3的ADCC活性。FIG. 15 shows the ADCC activity of the humanized antibody h21G4 H4K3.
具体实施方式DETAILED DESCRIPTION
I.定义I. Definitions
在本公开中,除非另有说明,否则本文中使用的科学和技术名词具有本领域技术人员所通常理解的含义。并且,本文中所用的蛋白质和核酸化学、分子生物学、细胞和组织培养、微生物学、免疫学相关术语和实验室操作步骤均为相应领域内广泛使用的术语和常规步骤。同时,为了更好地理解本公开,下面提供相关术语的定义和解释。In the present disclosure, unless otherwise specified, the scientific and technical terms used herein have the meanings commonly understood by those skilled in the art. In addition, the protein and nucleic acid chemistry, molecular biology, cell and tissue culture, microbiology, immunology and laboratory operation procedures used herein are terms and routine procedures widely used in the corresponding fields. At the same time, in order to better understand the present disclosure, the definitions and explanations of the relevant terms are provided below.
如本文使用的和除非另作说明,术语“约”或“大约”是指在给定值或范围的加或减10%之内。在需要整数的情况下,该术语是指在给定值或范围的加或减10%之内、向上或向下舍入到最接近的整数。As used herein and unless otherwise specified, the term "about" or "approximately" means within plus or minus 10% of a given value or range. Where an integer is required, the term means within plus or minus 10% of a given value or range, rounded up or down to the nearest integer.
序列“相同性”或“同一性”具有本领域公认的含义,并且可以利用公开的技术计算两个核酸或多肽分子或区域之间序列相同性的百分比。可以沿着多核苷酸或多肽的全长或者沿着该分子的区域测量序列相同性(参见,例如:Computational Molecular Biology,Lesk,A.M.,ed.,Oxford University Pres,New York,1988;Biocomputing:Informaticsand Genome Projects,Smith,D.W.,ed.,Academic Press,New York,1993;ComputerAnalysis of Sequence Data,Part I,Griffin,A.M.,and Griffin,H.G.,eds.,HumanaPress,New Jersey,1994;Sequence Analysis in Molecular Biology,von Heinje,G.,Academic Press,1987;and Sequence Analysis Primer,Gribskov,M.and Devereux,J.,eds.,M Stockton Press,New York,1991)。虽然存在许多测量两个多核苷酸或多肽之间的相同性的方法,但是术语“相同性”是技术人员公知的(Carrillo,H.&Lipman,D.,SIAM JApplied Math 48:1073(1988))。Sequence "identity" or "identity" has an art-recognized meaning, and the percentage of sequence identity between two nucleic acid or polypeptide molecules or regions can be calculated using published techniques. Sequence identity can be measured along the entire length of a polynucleotide or polypeptide, or along a region of the molecule (see, e.g., Computational Molecular Biology, Lesk, A. M., ed., Oxford University Press, New York, 1988; Biocomputing: Informatics and Genome Projects, Smith, D. W., ed., Academic Press, New York, 1993; Computer Analysis of Sequence Data, Part I, Griffin, A. M., and Griffin, H. G., eds., Humana Press, New Jersey, 1994; Sequence Analysis in Molecular Biology, von Heinje, G., Academic Press, 1987; and Sequence Analysis Primer, Gribskov, M. and Devereux, J., eds., M Stockton Press, New York, 1991). Although there are many methods to measure the identity between two polynucleotides or polypeptides, the term "identity" is well known to those of skill (Carrillo, H. & Lipman, D., SIAM J Applied Math 48: 1073 (1988)).
就抗体的可变结构域而言,术语“可变”系指抗体之间有广泛序列差异的相关分子的某些部分,且被用于针对其特异靶的特定抗体的特异识别和结合。但是,可变性在抗体的整个可变结构域内不是均匀分布的。可变性集中在被称为互补决定区域(CDRs;即CDR1、CDR2和CDR3)或超变区的三个区段,它们均位于轻链和重链的可变结构域内。可变结构域内保守程度更高的部分被称为构架(FR)区或构架序列。天然重链和轻链的每个可变结构域均包括四个FR区,其主要采用β-折叠构型,它们将三个CDRs连接起来,CDRs形成环,所述环连接β-折叠结构并在某些情形下形成部分的β-折叠结构。每条链的CDRs通常被FR区在邻近连接起来,并且借助于来自其它链的CDR,有助于抗体靶结合位点(表位或决定簇)的形成(参看Kabat等人Sequences of Proteins of Immunological Interest,NationalInstituteof Health,Bethesda,MD(1987))。正如本文所使用,免疫球蛋白氨基酸残基的编号是依据Kabat等人的免疫球蛋白氨基酸残基编号系统而进行的,除非另有说明。一个CDR可具有特异结合关联表位的能力。With respect to the variable domains of antibodies, the term "variable" refers to certain parts of related molecules that have extensive sequence differences between antibodies and are used for specific recognition and binding of a particular antibody to its specific target. However, the variability is not evenly distributed throughout the variable domain of an antibody. The variability is concentrated in three segments called complementarity determining regions (CDRs; i.e., CDR1, CDR2, and CDR3) or hypervariable regions, which are located in the variable domains of light and heavy chains. The more conserved parts of the variable domains are called framework (FR) regions or framework sequences. Each variable domain of a natural heavy chain and light chain includes four FR regions, which mainly adopt a β-pleated configuration, connecting three CDRs, which form loops that connect the β-pleated structure and in some cases form part of the β-pleated structure. The CDRs of each chain are usually linked together in proximity by the FR regions and, with the help of the CDRs from the other chain, contribute to the formation of the antibody target binding site (epitope or determinant) (see Kabat et al. Sequences of Proteins of Immunological Interest, National Institute of Health, Bethesda, MD (1987)). As used herein, the numbering of immunoglobulin amino acid residues is based on the immunoglobulin amino acid residue numbering system of Kabat et al., unless otherwise indicated. A CDR may have the ability to specifically bind to a cognate epitope.
如本文所用,抗体的“抗体片段”或“抗原结合片段”指全长抗体的任何部分,其少于全长,但是至少包含结合抗原的所述抗体的部分可变区(例如一个或多个CDR和/或一个或多个抗体结合位点),并且因此保留结合特异性以及所述全长抗体的至少部分特异性结合能力。因此,抗原结合片段指包含与衍生抗体片段的抗体结合相同抗原的抗原结合部分的抗体片段。抗体片段包括通过酶促处理全长抗体所产生的抗体衍生物,以及合成产生的衍生物,例如重组产生的衍生物。As used herein, an "antibody fragment" or "antigen-binding fragment" of an antibody refers to any portion of a full-length antibody that is less than the full length, but contains at least a portion of the variable region (e.g., one or more CDRs and/or one or more antibody combining sites) of the antibody that binds to an antigen, and thus retains binding specificity and at least a portion of the specific binding ability of the full-length antibody. Thus, an antigen-binding fragment refers to an antibody fragment that contains an antigen-binding portion that binds to the same antigen as the antibody from which the antibody fragment was derived. Antibody fragments include antibody derivatives produced by enzymatic treatment of full-length antibodies, as well as synthetically produced derivatives, such as recombinantly produced derivatives.
如本文所用,“单克隆抗体”指相同抗体的群体,表示单克隆抗体群体中的每个单独的抗体分子与其他抗体分子相同。这种特性与抗体的多克隆群体的特性相反,所述抗体的多克隆群体包含具有多种不同序列的抗体。单克隆抗体可以通过许多公知的方法来制备(Smith et al.(2004)J.Clin.Pathol.57,912-917;和Nelson et al.,J Clin Pathol(2000),53,111-117)。例如,单克隆抗体可以通过永生化B细胞来制备,例如通过与骨髓瘤细胞融合以产生杂交瘤细胞系或者通过用诸如EBV的病毒感染B细胞。重组技术还可以用来在体外通过用携带编码抗体的核苷酸的人工序列的质粒转化宿主细胞来从宿主细胞的克隆群体制备抗体。As used herein, "monoclonal antibody" refers to a population of identical antibodies, meaning that each individual antibody molecule in a monoclonal antibody population is identical to other antibody molecules. This property is in contrast to the properties of a polyclonal population of antibodies, which contains antibodies with a variety of different sequences. Monoclonal antibodies can be prepared by many well-known methods (Smith et al. (2004) J. Clin. Pathol. 57, 912-917; and Nelson et al., J Clin Pathol (2000), 53, 111-117). For example, monoclonal antibodies can be prepared by immortalized B cells, for example, by fusion with myeloma cells to produce hybridoma cell lines or by infecting B cells with viruses such as EBV. Recombinant technology can also be used to prepare antibodies from a clonal population of host cells in vitro by transforming host cells with a plasmid carrying an artificial sequence of nucleotides encoding the antibody.
如本文所用,全长抗体是具有两条全长重链(例如VH-CH1-CH2-CH3或VH-CH1-CH2-CH3-CH4)和两条全长轻链(VL-CL)和铰链区的抗体,例如通过抗体分泌B细胞天然产生的抗体以及合成产生的具有相同结构域的抗体。As used herein, a full-length antibody is an antibody having two full-length heavy chains (e.g., VH-CH1-CH2-CH3 or VH-CH1-CH2-CH3-CH4) and two full-length light chains (VL-CL) and a hinge region, such as antibodies naturally produced by antibody-secreting B cells and antibodies produced synthetically with the same domains.
如本文所用,术语“嵌合抗体”是指这样的抗体,其中可变区序列源自一个物种,恒定区序列源自另一物种,如其中可变区序列源自小鼠抗体及恒定区序列源自人抗体的抗体。As used herein, the term "chimeric antibody" refers to an antibody in which the variable region sequence is derived from one species and the constant region sequence is derived from another species, such as an antibody in which the variable region sequence is derived from a mouse antibody and the constant region sequence is derived from a human antibody.
如本文所用,术语“人源化”抗体是指非人(例如小鼠)抗体形式,其是嵌合的免疫球蛋白、免疫球蛋白链或者其片段(如Fv、Fab、Fab'、F(ab')2或者抗体的其它抗原结合亚序列),含有源自非人免疫球蛋白的最小序列。优选地,人源化抗体是人免疫球蛋白(接受者抗体),其中接受者抗体的互补决定区(CDR)的残基由来自具有希望的特异性、亲和性和能力的非人物种(供体抗体)如小鼠、大鼠或者兔的CDR残基置换。As used herein, the term "humanized" antibody refers to a non-human (e.g., mouse) antibody form that is a chimeric immunoglobulin, immunoglobulin chain, or fragment thereof (e.g., Fv, Fab, Fab', F(ab') 2 , or other antigen-binding subsequences of an antibody) containing minimal sequence derived from a non-human immunoglobulin. Preferably, a humanized antibody is a human immunoglobulin (recipient antibody) in which residues in the complementary determining regions (CDRs) of the recipient antibody are replaced by CDR residues from a non-human species (donor antibody) such as a mouse, rat, or rabbit having the desired specificity, affinity, and capacity.
此外,在人源化中,还可能对VH和/或VL的CDR1、CDR2和/或CDR3区内的氨基酸残基进行突变,由此改善抗体的一或多种结合特性(例如亲和性)。可进行例如PCR介导的突变引入突变,其对抗体结合或其它功能特性的影响可利用本文所述的体外或体内测试评估。通常,引入保守性突变。此类突变可为氨基酸取代、添加或缺失。另外,CDR内的突变通常不超过一个或两个。因此,本公开所述人源化抗体还涵盖CDR内包含1或2两个氨基酸突变的抗体。In addition, in humanization, it is also possible to mutate the amino acid residues in the CDR1, CDR2 and/or CDR3 regions of VH and/or VL, thereby improving one or more binding properties (e.g., affinity) of the antibody. For example, PCR-mediated mutations can be used to introduce mutations, and their effects on antibody binding or other functional properties can be evaluated using in vitro or in vivo tests described herein. Typically, conservative mutations are introduced. Such mutations can be amino acid substitutions, additions or deletions. In addition, the mutations in the CDR are generally no more than one or two. Therefore, the humanized antibodies described in the present disclosure also encompass antibodies comprising 1 or 2 amino acid mutations in the CDR.
如本文所用,术语“CDR”指互补决定区(complementarity-determining region),已知抗体分子的每个重链和轻链具有3个CDR。CDR也称作高变区,且存在于抗体的每个重链和轻链的可变区中,在CDR的一级结构中具有非常高的变异性位点。本说明书中,重链的CDR由来自重链的氨基端序列的氨基端的CDR1、CDR2、CDR3表示,轻链的CDR由来自轻链的氨基端序列的氨基端的CDR1、CDR2、CDR3表示。这些位点在三级结构中彼此临近,并决定抗体所结合的抗原的特异性。As used herein, the term "CDR" refers to a complementarity-determining region, and each heavy chain and light chain of a known antibody molecule has three CDRs. CDRs are also referred to as hypervariable regions and are present in the variable regions of each heavy chain and light chain of an antibody, with very high variability sites in the primary structure of the CDRs. In this specification, the CDRs of the heavy chain are represented by CDR1, CDR2, and CDR3 from the amino terminal of the amino terminal sequence of the heavy chain, and the CDRs of the light chain are represented by CDR1, CDR2, and CDR3 from the amino terminal of the amino terminal sequence of the light chain. These sites are adjacent to each other in the tertiary structure and determine the specificity of the antigen to which the antibody binds.
如本文所用,术语“表位”指抗体的互补位结合的抗原上的任何抗原决定簇。表位决定簇通常包含分子的化学活性表面分型,例如氨基酸或糖侧链,并且通常具有特定的三维结构特征以及特定的电荷特征。As used herein, the term "epitope" refers to any antigenic determinant on an antigen to which the paratope of an antibody binds. Epitopic determinants usually comprise chemically active surface patterns of molecules, such as amino acids or sugar side chains, and usually have specific three-dimensional structural characteristics as well as specific charge characteristics.
如本文所用,关于抗体或其抗原结合片段的“特异性结合”或“免疫特异性地结合”在本文中可交换使用,并且指抗体或抗原结合片段通过抗体和抗原的抗体结合位点之间的非共价相互作用与同种抗原形成一个或多个非共价键的能力。所述抗原可以是分离的抗原或存在于肿瘤细胞。通常,免疫特异性地结合(或特异性结合)抗原的抗体是以约或1×107M-1或1×108M-1或更大的亲和常数Ka(或者1×10-7M或1×10-8M或更低的解离常数(Kd))结合所述抗原。亲和常数可以通过抗体反应的标准动力学方法来测定,例如,免疫测定、表面等离子共振(SPR)(Rich and Myszka(2000)Curr.Opin.Biotechnol 11:54;Englebienne(1998)Analyst.123:1599)、等温滴定量热法(ITC)或本领域已知的其他动力学相互作用测定(参见,例如,Paul,ed.,Fundamental Immunology,2nd ed.,Raven Press,New York,pages 332-336(1989);还参见描述用于计算抗体的结合亲和力的示例性SPR和ITC方法的美国专利第7,229,619号)。用于实时检测和监测结合速率的仪器和方法是已知的,并且可商购(参见,BiaCore 2000,Biacore AB,Upsala,Sweden and GE Healthcare LifeSciences;Malmqvist(2000)Biochem.Soc.Trans.27:335)。As used herein, "specific binding" or "immunospecifically binds" with respect to an antibody or antigen-binding fragment thereof are used interchangeably herein and refer to the ability of an antibody or antigen-binding fragment to form one or more non-covalent bonds with a cognate antigen through non-covalent interactions between the antibody combining sites of the antibody and the antigen. The antigen may be an isolated antigen or present in a tumor cell. Typically, an antibody that immunospecifically binds (or specifically binds) an antigen binds the antigen with an affinity constant Ka of about or 1×10 7 M -1 or 1×10 8 M -1 or greater (or a dissociation constant (Kd) of 1×10 -7 M or 1×10 -8 M or less). Affinity constants can be determined by standard kinetic methods of antibody reactions, e.g., immunoassays, surface plasmon resonance (SPR) (Rich and Myszka (2000) Curr. Opin. Biotechnol 11:54; Englebienne (1998) Analyst. 123:1599), isothermal titration calorimetry (ITC), or other kinetic interaction assays known in the art (see, e.g., Paul, ed., Fundamental Immunology, 2nd ed., Raven Press, New York, pages 332-336 (1989); see also U.S. Pat. No. 7,229,619 for a description of exemplary SPR and ITC methods for calculating the binding affinity of an antibody). Instruments and methods for real-time detection and monitoring of binding rates are known and commercially available (see, BiaCore 2000, Biacore AB, Upsala, Sweden and GE Healthcare Life Sciences; Malmqvist (2000) Biochem. Soc. Trans. 27:335).
如本文所用,术语“多核苷酸”和“核酸分子”指包含至少两个连接的核苷酸或核苷酸衍生物的寡聚体或聚合物,包括通常通过磷酸二酯键连接在一起的脱氧核糖核酸(DNA)和核糖核酸(RNA)。如本文所使用,术语“核酸分子”意欲包括DNA分子及RNA分子。核酸分子可为单链或双链,且可为cDNA。As used herein, the terms "polynucleotide" and "nucleic acid molecule" refer to an oligomer or polymer comprising at least two linked nucleotides or nucleotide derivatives, including deoxyribonucleic acid (DNA) and ribonucleic acid (RNA), usually linked together by a phosphodiester bond. As used herein, the term "nucleic acid molecule" is intended to include DNA molecules and RNA molecules. Nucleic acid molecules can be single-stranded or double-stranded, and can be cDNA.
如本文所用,分离的核酸分子是从存在于核酸分子的天然来源中的其他核酸分子分离的核酸分子。诸如cDNA分子的“分离的”核酸分子可以在通过重组技术制备时基本上不含其他细胞物质或培养基,或者在化学合成时基本上不含化学前体或其他化学成分。本文所提供的示例性分离的核酸分子包括编码所提供的抗体或抗原结合片段的分离的核酸分子。As used herein, an isolated nucleic acid molecule is a nucleic acid molecule isolated from other nucleic acid molecules present in the natural source of the nucleic acid molecule. "Isolated" nucleic acid molecules such as cDNA molecules can be substantially free of other cellular materials or culture media when prepared by recombinant technology, or substantially free of chemical precursors or other chemical compositions when chemosynthesized. The exemplary isolated nucleic acid molecules provided herein include the isolated nucleic acid molecules of the antibody or Fab provided by encoding.
如本文所用,“载体”是可复制的核酸,当载体转化入适当的宿主细胞时,可以从该载体表达一种或多种异源蛋白。关于载体包括那些通常通过限制酶切消化和连接可以将编码多肽或其片段的核酸引入其中的载体。关于载体还包括那些包含编码多肽的核酸的载体。载体用来将编码多肽的核酸引入宿主细胞,用于扩增核酸或者用于表达/展示核酸所编码的多肽。载体通常保持游离,但是可以设计为使基因或其部分整合入基因组的染色体。还考虑人工染色体的载体,例如酵母人工载体和哺乳动物人工染色体。这类媒介物的选择和用途是本领域技术人员公知的。As used herein, "vector" is a replicable nucleic acid from which one or more heterologous proteins can be expressed when the vector is transformed into an appropriate host cell. Vectors include those into which nucleic acids encoding polypeptides or fragments thereof can be introduced, usually by restriction digestion and ligation. Vectors also include those containing nucleic acids encoding polypeptides. Vectors are used to introduce nucleic acids encoding polypeptides into host cells, for amplification of nucleic acids or for expression/display of polypeptides encoded by nucleic acids. Vectors are usually kept free, but can be designed to integrate genes or parts thereof into chromosomes of the genome. Artificial chromosome vectors are also contemplated, such as yeast artificial vectors and mammalian artificial chromosomes. The selection and use of such vehicles are well known to those skilled in the art.
如本文所用,载体还包括“病毒载体”或“病毒的载体”。病毒的载体是工程化的病毒,其可操作地连接至外源基因以将外源基因转移(作为媒介物或穿梭(shuttle))入细胞。As used herein, vectors also include “viral vectors” or “viral vectors.” Viral vectors are engineered viruses that are operably linked to exogenous genes to transfer (as a vehicle or shuttle) the exogenous genes into cells.
如本文所用,“表达载体”包括能够表达DNA的载体,所述DNA与诸如启动子区的能够影响这类DNA片段表达的调控序列可操作地连接。这类额外的片段可以包括启动子和终止子序列,并且任选地可以包括一个或多个复制起点、一个或多个选择标记、增强子、多腺苷酸化信号等。表达载体一般来源于质粒或病毒DNA,或者可以包含这两者的元件。因此,表达载体指重组DNA或RNA构建体,例如质粒、噬菌体、重组病毒或其他载体,当引入适当的宿主细胞时,导致克隆DNA的表达。适当的表达载体是本领域技术人员公知的,并且包括在真核细胞和/或原核细胞中可复制的表达载体以及保持游离的表达载体或者整合入宿主细胞基因组的表达载体。As used herein, "expression vector" includes vectors capable of expressing DNA, which is operably linked to regulatory sequences such as promoter regions that can affect the expression of such DNA fragments. Such additional fragments may include promoter and terminator sequences, and may optionally include one or more replication origins, one or more selection markers, enhancers, polyadenylation signals, etc. Expression vectors are generally derived from plasmid or viral DNA, or may contain elements of both. Therefore, expression vectors refer to recombinant DNA or RNA constructs, such as plasmids, phages, recombinant viruses or other vectors, which, when introduced into appropriate host cells, result in the expression of cloned DNA. Suitable expression vectors are well known to those skilled in the art, and include expression vectors that are replicable in eukaryotic cells and/or prokaryotic cells and expression vectors that remain free or are integrated into the host cell genome.
如本文所用,术语“双特异性抗体”或“多特异性抗体”是指,将抗体通过功能连接(例如化学偶联、基因融合、非共价结合或其他方法)至一个或多个其他结合分子上,从而形成与两个以上不同位点和/或靶点结合的新的抗体构建体。其中,使用较多的是“双特异性抗体”,其特指针对两种不同抗原具有特异性的抗体构建体。通常,双特异性抗体或多特异性抗体至少包括2个抗原结合结构域。As used herein, the term "bispecific antibody" or "multispecific antibody" refers to the formation of a new antibody construct that binds to two or more different sites and/or targets by functionally linking an antibody (e.g., chemical coupling, gene fusion, non-covalent binding or other methods). Among them, the most commonly used is "bispecific antibody", which specifically refers to an antibody construct that is specific for two different antigens. Typically, a bispecific antibody or multispecific antibody includes at least two antigen binding domains.
如本文所用,术语“嵌合抗原受体(CAR)”是工程化的受体,其将任意特异性移植至免疫效应细胞上。通常,这些受体用来将单克隆抗体的特异性移植至T细胞上;通过逆转录病毒或慢病毒载体或者通过转座子促进它们编码序列的转移。CAR-工程化的T细胞(也缩写为CAR-T细胞)是装有嵌合受体的遗传工程化的T细胞,其胞外识别单元包含抗体衍生的识别结构域,并且其胞内区源自淋巴细胞刺激部分。原型CAR的结构是模块化的,设计为容纳各种功能结构域,从而使得能够选择特异性并控制T细胞的激活。优选的抗体衍生的识别单元是组合单克隆抗体的重链和轻链可变区的特异性和结合残基的单链可变片段(scFv)。最常见的淋巴细胞激活部分包括与T-细胞触发(例如CD3ζ)部分串联的T-细胞共刺激(例如CD28)结构域。通过用这类嵌合受体装备效应子淋巴细胞(如T细胞和自然杀伤细胞),工程化的细胞重新定向具有预先定义的对任何期望靶抗原的特异性,以非HLA限制性方式。利用逆转录病毒或慢病毒载体或者转座子将CAR构建体离体引入来自给定患者的外周淋巴细胞的T细胞。将所得的CAR工程化的T细胞输注回患者之后,它们运输,到达它们的靶位点,并且在与它们的靶细胞或组织相互作用时,它们经历激活并发挥它们预先定义的效应子功能。CAR方法的治疗靶标包括癌症和HIV感染的细胞,或者自身免疫效应细胞。As used herein, the term "chimeric antigen receptor (CAR)" is an engineered receptor that transplants any specificity to immune effector cells. Typically, these receptors are used to transplant the specificity of monoclonal antibodies to T cells; the transfer of their coding sequences is promoted by retroviral or lentiviral vectors or by transposons. CAR-engineered T cells (also abbreviated as CAR-T cells) are genetically engineered T cells equipped with chimeric receptors, whose extracellular recognition units include antibody-derived recognition domains, and whose intracellular regions are derived from lymphocyte stimulation parts. The structure of the prototype CAR is modular and is designed to accommodate various functional domains, so that specificity can be selected and the activation of T cells can be controlled. The preferred antibody-derived recognition unit is a single-chain variable fragment (scFv) of the specificity and binding residues of the heavy and light chain variable regions of the combined monoclonal antibodies. The most common lymphocyte activation part includes a T-cell costimulation (eg, CD28) domain in series with a T-cell trigger (eg, CD3ζ) part. By equipping effector lymphocytes (such as T cells and natural killer cells) with such chimeric receptors, engineered cell redirection has predefined specificity for any desired target antigen, in a non-HLA restricted manner. CAR constructs are introduced in vitro into T cells of peripheral lymphocytes from a given patient using retroviral or lentiviral vectors or transposons. After the resulting CAR engineered T cells are infused back into the patient, they are transported, arrive at their target sites, and when interacting with their target cells or tissues, they undergo activation and play their predefined effector functions. The therapeutic targets of the CAR method include cancer and HIV-infected cells, or autoimmune effector cells.
如本文所用,术语“亲和力”或“结合亲和力”指反映结合对的成员(例如抗体与抗原)之间相互作用的固有结合亲和力。分子X对其配偶体Y的亲和力通常可用平衡解离常数(KD)来表述。平衡解离常数是解离速率常数和结合速率常数(分别是kdis和kon)的比值。KD越小说明解离越小,代表抗体与抗原间的亲和力越强。亲和力可通过本领域知道的常用方法来测量,例如,使用表面等离子体共振术(SPR)在BIACORE仪中测定的KD。通常,抗体以不高于1×10-5M,例如小于大约1×10-6M、1×10-7M、1×10-8M、1×10-9M或1×10-10M或更小的平衡解离常数(KD)与抗原解离。As used herein, the term "affinity" or "binding affinity" refers to the intrinsic binding affinity that reflects the interaction between members of a binding pair (e.g., an antibody and an antigen). The affinity of a molecule X for its partner Y can usually be expressed in terms of an equilibrium dissociation constant (KD). The equilibrium dissociation constant is the ratio of the dissociation rate constant and the association rate constant (k dis and kon , respectively). The smaller the KD, the smaller the dissociation, which represents the stronger affinity between the antibody and the antigen. Affinity can be measured by conventional methods known in the art, for example, using a KD determined in a BIACORE instrument using surface plasmon resonance (SPR). Typically, an antibody dissociates from an antigen with an equilibrium dissociation constant (KD) of no more than 1×10 -5 M, for example, less than about 1×10 -6 M, 1×10 -7 M, 1×10 -8 M, 1×10 -9 M, or 1×10 -10 M or less.
如本文所用,术语“抗体依赖性细胞介导的细胞毒性”(ADCC)指抗体结合病毒感染的细胞或肿瘤细胞的抗原表位,其Fc段与杀伤细胞(NK细胞、巨噬细胞等)表面的Fc受体(FcR)结合,介导杀伤细胞直接杀伤靶细胞。As used herein, the term "antibody-dependent cell-mediated cytotoxicity" (ADCC) refers to the binding of antibodies to antigenic epitopes of virus-infected cells or tumor cells, and the binding of their Fc fragments to Fc receptors (FcR) on the surface of killer cells (NK cells, macrophages, etc.), mediating the direct killing of target cells by killer cells.
II.具体实施方案详述II. Detailed description of specific implementation scheme
一方面,本公开提供了一种纤维母细胞生长因子受体2b(FGFR2b)的抗体或其抗原结合片段,其包含重链可变区和轻链可变区,所述重链可变区和轻链可变区的CDR组合物为:由氨基酸序列SEQ ID NO:1构成的重链CDR1,由氨基酸序列SEQ ID NO:15构成的重链CDR2,由氨基酸序列SEQ ID NO:3构成的重链CDR3,以及由氨基酸序列SEQ ID NO:6构成的轻链CDR1,由氨基酸序列SEQ ID NO:7构成的轻链CDR2,由氨基酸序列SEQ ID NO:20构成的轻链CDR3。On the one hand, the present disclosure provides an antibody or an antigen-binding fragment thereof of fibroblast growth factor receptor 2b (FGFR2b), which comprises a heavy chain variable region and a light chain variable region, wherein the CDR composition of the heavy chain variable region and the light chain variable region is: a heavy chain CDR1 consisting of the amino acid sequence SEQ ID NO:1, a heavy chain CDR2 consisting of the amino acid sequence SEQ ID NO:15, a heavy chain CDR3 consisting of the amino acid sequence SEQ ID NO:3, and a light chain CDR1 consisting of the amino acid sequence SEQ ID NO:6, a light chain CDR2 consisting of the amino acid sequence SEQ ID NO:7, and a light chain CDR3 consisting of the amino acid sequence SEQ ID NO:20.
在一些实施方式中,前述的抗体或其抗原结合片段具有下列的重链可变区和轻链可变区的组合:In some embodiments, the aforementioned antibody or antigen-binding fragment thereof has the following combination of heavy chain variable region and light chain variable region:
所述重链可变区包含与SEQ ID NO.16所示氨基酸序列具有至少80%、85%、90%、95%、96%、97%、98%、99%或100%同一性的氨基酸序列,和所述轻链可变区包含与SEQID NO.21所示氨基酸序列具有至少80%、85%、90%、95%、96%、97%、98%、99%或100%同一性的氨基酸序列。The heavy chain variable region comprises an amino acid sequence that is at least 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99% or 100% identical to the amino acid sequence shown in SEQ ID NO.16, and the light chain variable region comprises an amino acid sequence that is at least 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99% or 100% identical to the amino acid sequence shown in SEQ ID NO.21.
在一些实施方式中,前述的抗体是IgG1、IgG2、IgG3或IgG4型抗体。In some embodiments, the aforementioned antibody is an IgG1, IgG2, IgG3 or IgG4 antibody.
在一些优选的实施方式中,前述重链包含与SEQ ID NO.18所示氨基酸序列具有至少80%、85%、90%、95%、96%、97%、98%、99%或100%同一性的氨基酸序列。In some preferred embodiments, the aforementioned heavy chain comprises an amino acid sequence that is at least 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99% or 100% identical to the amino acid sequence shown in SEQ ID NO.18.
在一些优选的实施方式中,前述轻链包含与SEQ ID NO.23所示氨基酸序列具有至少80%、85%、90%、95%、96%、97%、98%、99%或100%同一性的氨基酸序列。In some preferred embodiments, the aforementioned light chain comprises an amino acid sequence that is at least 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99% or 100% identical to the amino acid sequence shown in SEQ ID NO.23.
另一方面,本公开提供了编码前述的抗体或其抗原结合片段的核酸。In another aspect, the present disclosure provides a nucleic acid encoding the aforementioned antibody or antigen-binding fragment thereof.
在一些优选的实施方式中,前述核酸具有SEQ ID NO.17或其任何变体的抗体重链可变区编码核苷酸序列,和SEQ ID NO.22或其任何变体的抗体轻链可变区编码核苷酸序列。其中,所述任何变体优选与SEQ ID NO.17和/或SEQ ID NO.22具有至少80%、85%、90%、95%、96%、97%、98%或99%以上同一性的核苷酸序列。In some preferred embodiments, the aforementioned nucleic acid has a nucleotide sequence encoding an antibody heavy chain variable region of SEQ ID NO.17 or any variant thereof, and a nucleotide sequence encoding an antibody light chain variable region of SEQ ID NO.22 or any variant thereof. Wherein, any of the variants preferably have a nucleotide sequence that is at least 80%, 85%, 90%, 95%, 96%, 97%, 98% or 99% identical to SEQ ID NO.17 and/or SEQ ID NO.22.
在一些优选的实施方式中,前述核酸具有SEQ ID NO.19或其任何变体的抗体重链编码核苷酸序列,和SEQ ID NO.24或其任何变体的抗体轻链编码核苷酸序列。其中,所述任何变体优选与SEQ ID NO.19和/或SEQ ID NO.24具有至少80%、85%、90%、95%、96%、97%、98%或99%以上同一性的核苷酸序列。In some preferred embodiments, the aforementioned nucleic acid has an antibody heavy chain encoding nucleotide sequence of SEQ ID NO.19 or any variant thereof, and an antibody light chain encoding nucleotide sequence of SEQ ID NO.24 or any variant thereof. Wherein, any of the variants preferably have a nucleotide sequence that is at least 80%, 85%, 90%, 95%, 96%, 97%, 98% or 99% identical to SEQ ID NO.19 and/or SEQ ID NO.24.
另一方面,本公开提供了前述核酸的载体。In another aspect, the present disclosure provides a vector of the aforementioned nucleic acid.
另一方面,本公开提供了前述核酸载体的宿主细胞。In another aspect, the present disclosure provides a host cell for the aforementioned nucleic acid vector.
另一方面,本公开提供了一种药物组合物或药物组合,其包含前述的抗体或其抗原结合片段、核酸、载体和/或细胞。On the other hand, the present disclosure provides a pharmaceutical composition or pharmaceutical combination comprising the aforementioned antibody or antigen-binding fragment thereof, nucleic acid, vector and/or cell.
另一方面,本公开提供了一种生成前述的抗体或其抗原结合片段的方法,该方法包括培养前述的核酸或表达载体的宿主细胞。In another aspect, the present disclosure provides a method for producing the aforementioned antibody or antigen-binding fragment thereof, the method comprising culturing a host cell containing the aforementioned nucleic acid or expression vector.
另一方面,本公开提供了前述抗体或其抗原结合片段、核酸、载体、宿主细胞或药物组合物或药物组合用于制备检测、治疗、预防和/或减轻与表达FGFR2b相关的疾病的药物或试剂盒中的用途。On the other hand, the present disclosure provides the use of the aforementioned antibodies or antigen-binding fragments thereof, nucleic acids, vectors, host cells or pharmaceutical compositions or drug combinations for preparing drugs or kits for detecting, treating, preventing and/or alleviating diseases associated with the expression of FGFR2b.
在一些优选的实施方式中,所述与表达FGFR2b相关的疾病是肿瘤。In some preferred embodiments, the disease associated with the expression of FGFR2b is a tumor.
在一些更优选的实施方式中,所述与表达FGFR2b相关的疾病是胃癌。In some more preferred embodiments, the disease associated with the expression of FGFR2b is gastric cancer.
为了达到清楚和简洁描述的目的,本文中作为相同的或分开的一些实施方案的一部分来描述特征,然而,将要理解的是,本公开的范围可包括具有所描述的所有或一些特征的组合的一些实施方案。For purposes of clarity and concise description, features are described herein as part of the same or separate embodiments, however, it will be understood that the scope of the present disclosure may include embodiments having a combination of all or some of the described features.
实施例Example
实施例1:抗原制备Example 1: Antigen preparation
合成人FGFR2b(SEQ ID NO:11)、食蟹猴FGFR2b(SEQ ID NO:12)、大鼠FGFR2b(SEQID NO:13)和人FGFR2c(SEQ ID NO:14),序列如表1所示,将其胞外片段克隆到原核表达质粒中,以此质粒转化BL21E.coli。纯化得到人、食蟹猴、大鼠FGFR2b和人FGFR2c蛋白,SDS-PAGE结果如图1。Human FGFR2b (SEQ ID NO: 11), cynomolgus monkey FGFR2b (SEQ ID NO: 12), rat FGFR2b (SEQ ID NO: 13) and human FGFR2c (SEQ ID NO: 14) were synthesized, and their sequences are shown in Table 1. The extracellular fragments were cloned into prokaryotic expression plasmids, and BL21E.coli was transformed with the plasmids. Human, cynomolgus monkey, rat FGFR2b and human FGFR2c proteins were purified, and the SDS-PAGE results are shown in Figure 1.
表1人FGFR2b、食蟹猴FGFR2b、大鼠FGFR2b和人FGFR2c序列Table 1 Sequences of human FGFR2b, cynomolgus monkey FGFR2b, rat FGFR2b and human FGFR2c
实施例2:抗FGFR2b抗体的产生Example 2: Generation of anti-FGFR2b antibodies
(1)小鼠免疫(1) Mouse immunization
选择4-6周龄雌性Balb/C小鼠,按抗原、基因枪或组合形式进行免疫。免疫剂量为每只小鼠每次免疫20μg人FGFR2b质粒,每次间隔一周。抗原免疫。免疫剂量为每只小鼠每次免疫50μg FGFR2b蛋白,抗原与TiterMax佐剂(Sigma-Aldrich)等体积混合后进行皮下免疫和足垫免疫,每次间隔两周。六免后血清中抗体与人FGFR2b结合滴度,六免后血清效价增加明显,titer约1:170000-1:200000。在细胞水平上,免疫小鼠血清均能结合HEK293-hFGFR2b细胞和HEK293-hFGFR2c细胞。免疫小鼠血清中结合负筛蛋白FGFR2c血清效价低于FGFR2b抗体效价。Female Balb/C mice aged 4-6 weeks were selected and immunized by antigen, gene gun or combination. The immunization dose was 20 μg of human FGFR2b plasmid per mouse per immunization, with an interval of one week between each immunization. Antigen immunization. The immunization dose was 50 μg of FGFR2b protein per mouse per immunization. The antigen was mixed with TiterMax adjuvant (Sigma-Aldrich) in equal volumes and then subcutaneously and footpad immunized, with an interval of two weeks between each immunization. The antibody binding titer to human FGFR2b in the serum after six immunizations increased significantly, with a titer of about 1:170000-1:200000. At the cellular level, the sera of immunized mice can bind to HEK293-hFGFR2b cells and HEK293-hFGFR2c cells. The titer of the serum binding to the negative sieve protein FGFR2c in the sera of immunized mice was lower than the titer of the FGFR2b antibody.
(2)噬菌体筛选(2) Phage screening
取小鼠淋巴结及脾细胞,采用TRNzol裂解法提取细胞的RNA,然后逆转录合成单链cDNA,以此为模板扩增抗体的可变区序列。在自主建立的Fab抗体片段噬菌体展示平台,构建FGFR2b免疫文库。在固相免疫管(Maxisorp immunotube)中加入人FGFR2b蛋白或表达人FGFR2b细胞,人FGFR2c蛋白和表达人FGFR2c细胞作为负筛。选用所有免疫小鼠进行建库,库容大小为1.5×1010,Dot-Blot检测重链表达为100%,轻链表达为95%。随机挑选10-20个Fab进行测序验证噬菌体库多样性,显示重链可变区和轻链可变区均来自不同germline,说明该库多样性良好。筛选策略为抗原和细胞组合筛选,人FGFR2b的蛋白或细胞作为正筛,人FGFR2c的蛋白作为负筛,食蟹猴和大鼠FGFR2b作为辅助负筛。利用96孔板筛选得到抗原水平结合人FGFR2b的克隆和细胞水平上结合人FGFR2b较好的克隆并进行测序。结合上述孔板筛选数据,最终选择克隆21G4分子用于后续活性分析和评价。Mouse lymph nodes and spleen cells were taken, and the RNA of the cells was extracted by TRNzol lysis method, and then reverse transcribed to synthesize single-stranded cDNA, which was used as a template to amplify the variable region sequence of the antibody. The FGFR2b immune library was constructed on the self-established Fab antibody fragment phage display platform. Human FGFR2b protein or cells expressing human FGFR2b, human FGFR2c protein and cells expressing human FGFR2c were added to the solid phase immunotube (Maxisorp immunotube) as negative screens. All immune mice were selected for library construction, with a library capacity of 1.5×1010. Dot-Blot detection showed that the heavy chain expression was 100% and the light chain expression was 95%. 10-20 Fabs were randomly selected for sequencing to verify the diversity of the phage library, showing that the heavy chain variable region and the light chain variable region were from different germlines, indicating that the library had good diversity. The screening strategy is antigen and cell combination screening, with human FGFR2b protein or cells as positive screening, human FGFR2c protein as negative screening, and cynomolgus monkey and rat FGFR2b as auxiliary negative screening. The clones that bind to human FGFR2b at the antigen level and clones that bind to human FGFR2b well at the cell level were screened using 96-well plates and sequenced. Combined with the above well plate screening data, the clone 21G4 molecule was finally selected for subsequent activity analysis and evaluation.
(3)阳性克隆的序列获取(3) Sequence acquisition of positive clones
根据噬菌体筛选的结果,扩增21G4阳性克隆的可变区序列。将扩增产物测序,得到候选抗体重链和轻链可变区序列。采用PCR方法分别克隆抗体轻、重链的可变区序列到真核表达载体,在CHO-18细胞中表达全长IgG抗体,分析全长抗体活性。21G4序列见表2。According to the results of phage screening, the variable region sequence of 21G4 positive clones was amplified. The amplified products were sequenced to obtain the heavy chain and light chain variable region sequences of the candidate antibodies. The variable region sequences of the antibody light and heavy chains were cloned into eukaryotic expression vectors by PCR, and the full-length IgG antibody was expressed in CHO-18 cells, and the activity of the full-length antibody was analyzed. The 21G4 sequence is shown in Table 2.
表2 21G4序列Table 2 21G4 sequence
实施例3:嵌合抗体活性检测Example 3: Chimeric Antibody Activity Detection
(1)嵌合抗体人FGFR2b蛋白的结合(1) Binding of chimeric antibodies to human FGFR2b protein
在96孔酶标板上包被0.5μg/mL的人FGFR2b蛋白,包被液为pH9.6的碳酸盐缓冲溶液,4℃过夜。用PBST洗三次,每孔加入200μl含有2%milk/PBS封闭1小时。PBST洗一次后每孔加入100μl样品上清,室温孵育60分钟;用PBST洗3遍后,每孔加入100μl HRP标记的抗人IgG Fc二抗,室温孵育60分钟。用PBST洗三遍后,每孔加入100μl TMB底物37℃显色10分钟后,以每孔50μl 2M硫酸溶液终止反应,并在450nm波长处读取吸光度。结果表明,21G4在抗原水平上能结合人FGFR2b蛋白,EC50为0.02nM,如图2所示。0.5 μg/mL human FGFR2b protein was coated on a 96-well ELISA plate, and the coating solution was a carbonate buffer solution with pH 9.6, overnight at 4°C. Wash three times with PBST, and add 200 μl of 2% milk/PBS to each well for blocking for 1 hour. After washing once with PBST, add 100 μl of sample supernatant to each well and incubate at room temperature for 60 minutes; after washing three times with PBST, add 100 μl of HRP-labeled anti-human IgG Fc secondary antibody to each well and incubate at room temperature for 60 minutes. After washing three times with PBST, add 100 μl of TMB substrate to each well for color development at 37°C for 10 minutes, terminate the reaction with 50 μl of 2M sulfuric acid solution per well, and read the absorbance at a wavelength of 450 nm. The results show that 21G4 can bind to human FGFR2b protein at the antigen level, with an EC 50 of 0.02 nM, as shown in Figure 2.
(2)嵌合抗体与食蟹猴、大鼠FGFR2b的结合(2) Binding of chimeric antibodies to cynomolgus monkey and rat FGFR2b
在96孔酶标板上包被0.5μg/mL的食蟹猴或者大鼠FGFR2b蛋白,包被液为pH9.6的碳酸盐缓冲溶液,4℃过夜。用PBST洗三次,每孔加入200μl含有2%milk/PBS封闭1小时。PBST洗一次后每孔加入100μl样品上清,室温孵育60分钟;用PBST洗3遍后,每孔加入100μlHRP标记的抗人IgG Fc二抗,室温孵育60分钟。用PBST洗三遍后,每孔加入100μlTMB底物37℃显色10分钟后,以每孔50μl 2M硫酸溶液终止反应,并在450nm波长处读取吸光度。结果表明,嵌合抗体21G4在抗原水平上能结合食蟹猴FGFR2b蛋白,也能结合大鼠FGFR2b蛋白,EC50均为0.02nM,如图3所示。0.5 μg/mL of cynomolgus monkey or rat FGFR2b protein was coated on a 96-well ELISA plate, and the coating solution was a carbonate buffer solution with pH 9.6, overnight at 4°C. Wash three times with PBST, and add 200 μl of 2% milk/PBS to each well for blocking for 1 hour. After washing once with PBST, add 100 μl of sample supernatant to each well and incubate at room temperature for 60 minutes; after washing three times with PBST, add 100 μl of HRP-labeled anti-human IgG Fc secondary antibody to each well and incubate at room temperature for 60 minutes. After washing three times with PBST, add 100 μl of TMB substrate to each well for color development at 37°C for 10 minutes, terminate the reaction with 50 μl of 2M sulfuric acid solution per well, and read the absorbance at a wavelength of 450 nm. The results show that the chimeric antibody 21G4 can bind to cynomolgus monkey FGFR2b protein and rat FGFR2b protein at the antigen level, and the EC 50 is 0.02 nM, as shown in Figure 3.
(3)嵌合抗体与表达人FGFR2b细胞的结合(3) Binding of chimeric antibodies to cells expressing human FGFR2b
收集人胃癌细胞KATOIII加入96孔板中,每孔2×104个细胞,100μL/孔。300g离心3分钟后弃上清,用50μL 3%BSA/PBS封闭10min后,将50μL抗体样品加入细胞中,轻轻混匀后于4℃孵育30分钟,用0.5%BSA/PBS洗3次。加入偶联AF647的抗人IgG二抗溶液,轻轻混匀后于4℃孵育30分钟,用0.5%BSA/PBS洗3次。最后用含5μg/mL PI的PBS重悬,混匀后用流式细胞仪检测。结果表明,嵌合抗体21G4在细胞水平上具有较好的结合活性,EC50为2.6nM,如图4所示。Human gastric cancer cells KATOIII were collected and added to a 96-well plate, 2×10 4 cells per well, 100 μL/well. After centrifugation at 300g for 3 minutes, the supernatant was discarded, and after blocking with 50 μL 3% BSA/PBS for 10 minutes, 50 μL of antibody sample was added to the cells, gently mixed and incubated at 4°C for 30 minutes, and washed 3 times with 0.5% BSA/PBS. Anti-human IgG secondary antibody solution coupled to AF647 was added, gently mixed and incubated at 4°C for 30 minutes, and washed 3 times with 0.5% BSA/PBS. Finally, it was resuspended with PBS containing 5 μg/mL PI, and detected by flow cytometry after mixing. The results showed that the chimeric antibody 21G4 had good binding activity at the cellular level, with an EC 50 of 2.6 nM, as shown in Figure 4.
(4)嵌合抗体与食蟹猴、大鼠FGFR2b细胞的结合(4) Binding of chimeric antibodies to cynomolgus monkey and rat FGFR2b cells
收集细胞加入96孔板中,每孔2×104个细胞,100μL/孔。300g离心3分钟后弃上清,用50μL 3%BSA/PBS封闭10min后,将50μL抗体样品加入细胞中,轻轻混匀后于4℃孵育30分钟,用0.5%BSA/PBS洗3次。加入偶联AF647的抗人IgG二抗溶液,轻轻混匀后于4℃孵育30分钟,用0.5%BSA/PBS洗3次。最后用含5μg/mL PI的PBS重悬,混匀后用流式细胞仪检测。结果表明,嵌合抗体21G4能结合食蟹猴FGFR2b细胞和大鼠FGFR2b细胞,结合食蟹猴细胞的EC50为0.20nM,结合大鼠细胞的EC50为0.67nM,如图5所示。Collect cells and add them to a 96-well plate, 2×10 4 cells per well, 100 μL/well. After centrifugation at 300g for 3 minutes, discard the supernatant, block with 50 μL 3% BSA/PBS for 10 minutes, add 50 μL of antibody sample to the cells, mix gently and incubate at 4°C for 30 minutes, and wash 3 times with 0.5% BSA/PBS. Add anti-human IgG secondary antibody solution conjugated to AF647, mix gently and incubate at 4°C for 30 minutes, and wash 3 times with 0.5% BSA/PBS. Finally, resuspend with PBS containing 5 μg/mL PI, mix and detect with flow cytometry. The results show that the chimeric antibody 21G4 can bind to cynomolgus monkey FGFR2b cells and rat FGFR2b cells, with an EC 50 of 0.20nM for cynomolgus monkey cells and 0.67nM for rat cells, as shown in Figure 5.
(5)嵌合抗体对FGF7/FGFR2b结合的阻断(5) Blockade of FGF7/FGFR2b binding by chimeric antibodies
在96孔酶标板上包被50μg/mL肝素溶液,包被液为pH9.6的碳酸盐缓冲液,4℃过夜。用PBST洗三次,每孔加入100μl含有0.2%μg/mL的FGF7溶液孵育1小时。用PBST洗三次,2%BSA/PBS再孵育1个小时,用PBST洗三次,将不同浓度抗体样品与0.5μg/mL的人FGFR2b蛋白(小鼠Fc标签)在封闭好的U型96孔板中37℃孵育15分钟。用PBS洗三次96孔酶标板,每孔加入100μl已孵育好的混合物,室温孵育1小时。用PBST洗三次后,每孔加入100μlHRP偶联的抗小鼠Fc的抗体,室温避光孵育1个小时。用PBST洗三次后每孔加入100μlTMB底物37℃显色10分钟后,以每孔50μl 2M硫酸溶液终止反应,并在450nm波长处读取吸光度。结果显示,嵌合抗体21G4在抗原水平上能较好抑制FGF7与人FGFR2b蛋白的结合,如图6所示。Coat a 96-well ELISA plate with a 50 μg/mL heparin solution in a carbonate buffer solution at pH 9.6 at 4°C overnight. Wash three times with PBST, add 100 μl of a 0.2% μg/mL FGF7 solution to each well and incubate for 1 hour. Wash three times with PBST, incubate with 2% BSA/PBS for another hour, wash three times with PBST, and incubate different concentrations of antibody samples with 0.5 μg/mL human FGFR2b protein (mouse Fc tag) in a blocked U-shaped 96-well plate at 37°C for 15 minutes. Wash the 96-well ELISA plate three times with PBS, add 100 μl of the incubated mixture to each well, and incubate at room temperature for 1 hour. After washing three times with PBST, add 100 μl of HRP-coupled anti-mouse Fc antibody to each well and incubate at room temperature for 1 hour in the dark. After washing three times with PBST, 100 μl TMB substrate was added to each well for color development at 37°C for 10 minutes, and then 50 μl 2M sulfuric acid solution was added to each well to terminate the reaction, and the absorbance was read at a wavelength of 450 nm. The results showed that the chimeric antibody 21G4 could well inhibit the binding of FGF7 to human FGFR2b protein at the antigen level, as shown in Figure 6.
(6)嵌合抗体对FGF7诱导细胞增殖的抑制(6) Inhibition of FGF7-induced cell proliferation by chimeric antibodies
将Ba/F3-hFGFR2b-1G9细胞用不含小鼠IL-3、含2.5μg/mL的肝素和10%胎牛血清的IMDM培养基重悬细胞,按照每孔3×104个细胞,100μL/孔铺板,饥饿过夜。次日,将30ng/mL的FGF7与不同浓度的抗体等体积混合,37℃孵育15分钟。取100μL孵育完成的FGF7/抗体混合溶液加到细胞中,在5%CO2、37℃细胞培养箱中培养5天,培养完成后用Promega公司的Cell titer Glo(货号G7570)进行检测,用酶标仪检测化学发光信号。结果表明,嵌合抗体21G4增殖阻断活性较好,IC50为1.3nM,如图7所示。Ba/F3-hFGFR2b-1G9 cells were resuspended in IMDM medium containing 2.5 μg/mL heparin and 10% fetal bovine serum without mouse IL-3, and 3×104 cells were plated at 100 μL/well per well, and starved overnight. The next day, 30 ng/mL of FGF7 was mixed with antibodies of different concentrations in equal volumes and incubated at 37°C for 15 minutes. 100 μL of the incubated FGF7/antibody mixed solution was added to the cells and cultured in a 5% CO 2 , 37°C cell culture incubator for 5 days. After the culture was completed, Promega's Cell titer Glo (Cat. No. G7570) was used for detection, and the chemiluminescent signal was detected with an enzyme marker. The results showed that the chimeric antibody 21G4 had good proliferation blocking activity, with an IC 50 of 1.3 nM, as shown in Figure 7.
(7)嵌合抗体对FGF10/FGFR2b及FGF23/FGFR2c结合的阻断(7) Blockade of FGF10/FGFR2b and FGF23/FGFR2c binding by chimeric antibodies
在96孔酶标板上包被50μg/mL肝素溶液,包被液为pH9.6的碳酸盐缓冲液,4℃过夜。用PBST洗三次,每孔加入100μl含有0.2%μg/mL的FGF10/FGF23溶液孵育1小时。用PBST洗三次,2%BSA/PBS再孵育1个小时,用PBST洗三次,将不同浓度抗体样品与0.5μg/mL的人FGFR2b蛋白(小鼠Fc标签)在封闭好的U型96孔板中37℃孵育15分钟。用PBS洗三次96孔酶标板,每孔加入100μl已孵育好的混合物,室温孵育1小时。用PBST洗三次后,每孔加入100μlHRP偶联的抗小鼠Fc的抗体,室温避光孵育1个小时。用PBST洗三次后每孔加入100μl TMB底物37℃显色10分钟后,以每孔50μl 2M硫酸溶液终止反应,并在450nm波长处读取吸光度。结果显示嵌合抗体21G4在抗原水平上能较好抑制FGF10与人FGFR2b蛋白的结合,IC50为5.7nM,不会阻断负筛蛋白FGFR2c与其配体FGF23与的结合,如图8所示。Coat the 96-well ELISA plate with 50 μg/mL heparin solution, the coating solution is pH 9.6 carbonate buffer, overnight at 4°C. Wash three times with PBST, add 100 μl of 0.2% μg/mL FGF10/FGF23 solution to each well and incubate for 1 hour. Wash three times with PBST, incubate for another hour with 2% BSA/PBS, wash three times with PBST, and incubate different concentrations of antibody samples with 0.5 μg/mL human FGFR2b protein (mouse Fc tag) in a blocked U-shaped 96-well plate at 37°C for 15 minutes. Wash the 96-well ELISA plate three times with PBS, add 100 μl of the incubated mixture to each well, and incubate at room temperature for 1 hour. After washing three times with PBST, add 100 μl of HRP-coupled anti-mouse Fc antibody to each well and incubate at room temperature for 1 hour in the dark. After washing three times with PBST, 100 μl of TMB substrate was added to each well for color development at 37°C for 10 minutes, and then 50 μl of 2M sulfuric acid solution was added to each well to terminate the reaction, and the absorbance was read at a wavelength of 450 nm. The results showed that the chimeric antibody 21G4 could well inhibit the binding of FGF10 to human FGFR2b protein at the antigen level, with an IC 50 of 5.7 nM, and would not block the binding of negative sieve protein FGFR2c to its ligand FGF23, as shown in Figure 8.
(8)嵌合抗体对FGF10诱导细胞增殖的阻断(8) Chimeric antibodies block FGF10-induced cell proliferation
将Ba/F3-hFGFR2b-1G9细胞用不含小鼠IL-3、含2.5μg/mL的肝素和10%胎牛血清的IMDM培养基重悬细胞,按照每孔3×104个细胞,100μL/孔铺板,饥饿过夜。次日,将30ng/mL的FGF10与不同浓度的抗体等体积混合,37℃孵育15分钟。取100μL孵育完成的FGF10/抗体混合溶液加到细胞中,在5%CO2、37℃细胞培养箱中培养5天,培养完成后用Promega公司的Cell titer Glo(货号G7570)进行检测,用酶标仪检测化学发光信号。结果表明,嵌合抗体21G4能够阻断FGF10诱导的细胞增殖,IC50为1.9nM,如图9所示。Ba/F3-hFGFR2b-1G9 cells were resuspended in IMDM medium containing 2.5 μg/mL heparin and 10% fetal bovine serum without mouse IL-3, and 3×10 4 cells were plated at 100 μL/well per well, and starved overnight. The next day, 30 ng/mL of FGF10 was mixed with antibodies of different concentrations in equal volumes and incubated at 37°C for 15 minutes. 100 μL of the incubated FGF10/antibody mixed solution was added to the cells, and cultured in a 5% CO 2 , 37°C cell culture incubator for 5 days. After the culture was completed, the cells were detected with Promega's Cell titer Glo (Cat. No. G7570), and the chemiluminescent signal was detected with an enzyme marker. The results showed that the chimeric antibody 21G4 was able to block FGF10-induced cell proliferation, with an IC 50 of 1.9 nM, as shown in Figure 9.
(9)嵌合抗体结合特异性(9) Chimeric Antibody Binding Specificity
在96孔酶标板上包被0.5μg/mL的人FGFR2c蛋白,包被液为pH9.6的碳酸盐缓冲溶液,4℃过夜。用PBST洗三次,每孔加入200μl含有2%milk/PBS封闭1小时。PBST洗一次后每孔加入100μl样品上清,室温孵育60分钟;用PBST洗3遍后,每孔加入100μl HRP标记的抗人IgG Fc二抗,室温孵育60分钟。用PBST洗三遍后,每孔加入100μl TMB底物37℃显色10分钟后,以每孔50μl 2M硫酸溶液终止反应,并在450nm波长处读取吸光度。结果显示,嵌合抗体21G4不结合人FGFR2c蛋白,如图10-A所示。0.5 μg/mL human FGFR2c protein was coated on a 96-well ELISA plate, and the coating solution was a carbonate buffer solution with a pH of 9.6, overnight at 4°C. Wash three times with PBST, and add 200 μl of 2% milk/PBS to each well for blocking for 1 hour. After washing once with PBST, add 100 μl of sample supernatant to each well and incubate at room temperature for 60 minutes; after washing three times with PBST, add 100 μl of HRP-labeled anti-human IgG Fc secondary antibody to each well and incubate at room temperature for 60 minutes. After washing three times with PBST, add 100 μl of TMB substrate to each well for color development at 37°C for 10 minutes, terminate the reaction with 50 μl of 2M sulfuric acid solution per well, and read the absorbance at a wavelength of 450 nm. The results show that the chimeric antibody 21G4 does not bind to the human FGFR2c protein, as shown in Figure 10-A.
收集HEK293-hFGFR2c-3D5负筛细胞加入96孔板中,每孔2×104个细胞,100μL/孔。300g离心3分钟后弃上清,用50μL 3%BSA/PBS封闭10min后,将50μL抗体样品加入细胞中,轻轻混匀后于4℃孵育30分钟,用0.5%BSA/PBS洗3次。加入偶联AF647的抗人IgG二抗溶液,轻轻混匀后于4℃孵育30分钟,用0.5%BSA/PBS洗3次。最后用含5μg/mL PI的PBS重悬,混匀后用流式细胞仪检测,结果显示,嵌合抗体21G4不结合表达人FGFR2c的细胞,如图10-B所示。HEK293-hFGFR2c-3D5 negative screening cells were collected and added to a 96-well plate, 2×10 4 cells per well, 100 μL/well. After centrifugation at 300g for 3 minutes, the supernatant was discarded, and after blocking with 50 μL 3% BSA/PBS for 10 minutes, 50 μL of antibody sample was added to the cells, gently mixed and incubated at 4°C for 30 minutes, and washed 3 times with 0.5% BSA/PBS. Anti-human IgG secondary antibody solution coupled to AF647 was added, gently mixed and incubated at 4°C for 30 minutes, and washed 3 times with 0.5% BSA/PBS. Finally, it was resuspended with PBS containing 5 μg/mL PI, mixed and detected by flow cytometry. The results showed that the chimeric antibody 21G4 did not bind to cells expressing human FGFR2c, as shown in Figure 10-B.
(10)嵌合抗体亲和力(10) Chimeric antibody affinity
使用BIAcore T200系统,通过表面等离子体共振(SPR),测量抗FGFR2b抗体对人FGFR2b的动力学结合活性。将2μg/ml的抗FGFR2b抗体固定到传感器芯片Protein A上,用1×HBS-EP缓冲液作为运行缓冲液,流速为10μl/分钟,运行40秒。将0-21.7nM的不同浓度的人FGFR2b以30μl/分钟的流速注射到固定化的抗FGFR2b抗体表面上。在每个注射循环后,用再生缓冲液10mM甘氨酸(pH2.0)以30μl/分钟的流速再生Protein A芯片表面。使用背景扣除结合传感图,分析结合速率常数(ka)和解离速率常数(kd)及平衡解离常数KD,如表3所示。用BIAevaluation软件,将所得的数据集与Langmuir 1∶1 kinetics模型拟合。结果显示,嵌合抗体21G4高亲和力结合人FGFR2b,如图11所示。The kinetic binding activity of anti-FGFR2b antibodies to human FGFR2b was measured by surface plasmon resonance (SPR) using the BIAcore T200 system. 2 μg/ml of anti-FGFR2b antibodies were immobilized on the sensor chip Protein A, and 1×HBS-EP buffer was used as the running buffer at a flow rate of 10 μl/min for 40 seconds. Different concentrations of human FGFR2b of 0-21.7 nM were injected onto the immobilized anti-FGFR2b antibody surface at a flow rate of 30 μl/min. After each injection cycle, the Protein A chip surface was regenerated at a flow rate of 30 μl/min with a regeneration buffer of 10 mM glycine (pH 2.0). The binding rate constant (ka) and dissociation rate constant (kd) and equilibrium dissociation constant KD were analyzed using background subtraction binding sensorgrams, as shown in Table 3. The resulting data set was fitted to the Langmuir 1:1 kinetics model using BIAevaluation software. The results showed that the chimeric antibody 21G4 bound to human FGFR2b with high affinity, as shown in FIG11 .
表3嵌合抗体21G4亲和力测定Table 3 Affinity determination of chimeric antibody 21G4
实施例4:抗FGFR2b嵌合抗体的人源化改造Example 4: Humanization of anti-FGFR2b chimeric antibody
以嵌合抗体21G4为基础进行人源化改造。将轻、重链衍生物分别进行全序列合成后,克隆到含有抗体κ链恒定区CK或人IgG1恒定区CH1-CH3的载体。轻、重链衍生物质粒转染CHO细胞,表达7-9天,收取上清进行Protein A柱纯化,得到人源化分子h21G4 H4K3。h21G4H4K3序列见表4。Humanization was performed based on the chimeric antibody 21G4. The light and heavy chain derivatives were fully synthesized and cloned into a vector containing the antibody κ chain constant region CK or the human IgG1 constant region CH1-CH3. The light and heavy chain derivative plasmids were transfected into CHO cells and expressed for 7-9 days. The supernatant was collected and purified by Protein A column to obtain the humanized molecule h21G4 H4K3. The sequence of h21G4H4K3 is shown in Table 4.
表4 h21G4 H4K3序列Table 4 h21G4 H4K3 sequence
实施例5:人源化抗体活性检测Example 5: Humanized Antibody Activity Detection
(1)人源化抗体与FGFR2b的结合(1) Binding of humanized antibodies to FGFR2b
在96孔酶标板上包被0.5μg/mL的抗原蛋白,分别为人FGFR2b、食蟹猴FGFR2b、大鼠FGFR2b、人FGFR2c蛋白,包被液为pH9.6的碳酸盐缓冲溶液,4℃过夜。用PBST洗三次,每孔加入200μl含有2%milk/PBS封闭1小时。PBST洗一次后每孔加入100μl样品上清,室温孵育60分钟;用PBST洗3遍后,每孔加入100μl HRP标记的抗人IgG二抗,室温孵育60分钟。用PBST洗三遍后,每孔加入100μl TMB底物37℃显色10分钟后,以每孔50μl 2M硫酸溶液终止反应,并在450nm波长处读取吸光度。结果显示,人源化抗体h21G4 H4K3在抗原水平上能与人FGFR2b、食蟹猴FGFR2b和大鼠FGFR2b结合,且不结合人FGFR2c蛋白,如表5和图12所示。0.5 μg/mL antigen protein was coated on a 96-well ELISA plate, including human FGFR2b, cynomolgus monkey FGFR2b, rat FGFR2b, and human FGFR2c proteins. The coating solution was a carbonate buffer solution at pH 9.6, and the plate was incubated at 4°C overnight. Wash three times with PBST, and add 200 μl of 2% milk/PBS to each well for blocking for 1 hour. After washing once with PBST, add 100 μl of sample supernatant to each well and incubate at room temperature for 60 minutes; after washing three times with PBST, add 100 μl of HRP-labeled anti-human IgG secondary antibody to each well and incubate at room temperature for 60 minutes. After washing three times with PBST, add 100 μl of TMB substrate to each well for color development at 37°C for 10 minutes, terminate the reaction with 50 μl of 2M sulfuric acid solution per well, and read the absorbance at a wavelength of 450 nm. The results showed that the humanized antibody h21G4 H4K3 could bind to human FGFR2b, cynomolgus monkey FGFR2b and rat FGFR2b at the antigen level, but did not bind to human FGFR2c protein, as shown in Table 5 and FIG. 12 .
表5人源化抗体h21G4 H4K3结合情况Table 5 Humanized antibody h21G4 H4K3 binding
(2)人源化抗体与表达人FGFR2b细胞的结合(2) Binding of humanized antibodies to cells expressing human FGFR2b
收集人胃癌细胞KATOIII加入96孔板中,每孔2×104个细胞,100μL/孔。300g离心3分钟后弃上清,用50μL 3%BSA/PBS封闭10min后,将50μL抗体样品加入细胞中,轻轻混匀后于4℃孵育30分钟,用0.5%BSA/PBS洗3次。加入偶联AF647的抗人IgG二抗溶液,轻轻混匀后于4℃孵育30分钟,用0.5%BSA/PBS洗3次。最后用含5μg/mL PI的PBS重悬,混匀后用流式细胞仪检测。结果显示,人源化抗体h21G4 H4K3在细胞水平上能与人FGFR2b结合,EC50为0.97nM,结果如图13所示。Human gastric cancer cells KATOIII were collected and added to a 96-well plate, 2×10 4 cells per well, 100 μL/well. After centrifugation at 300g for 3 minutes, the supernatant was discarded, and after blocking with 50 μL 3% BSA/PBS for 10 minutes, 50 μL of antibody sample was added to the cells, gently mixed and incubated at 4°C for 30 minutes, and washed 3 times with 0.5% BSA/PBS. Anti-human IgG secondary antibody solution coupled to AF647 was added, gently mixed and incubated at 4°C for 30 minutes, and washed 3 times with 0.5% BSA/PBS. Finally, it was resuspended with PBS containing 5 μg/mL PI, and detected by flow cytometry after mixing. The results showed that the humanized antibody h21G4 H4K3 could bind to human FGFR2b at the cellular level, with an EC 50 of 0.97 nM, as shown in Figure 13.
(3)人源化抗体与人FGFR2c的结合(3) Binding of humanized antibodies to human FGFR2c
收集HEK293-hFGFR2c-3D5细胞加入96孔板中,每孔2×104个细胞,100μL/孔。300g离心3分钟后弃上清,用50μL 3%BSA/PBS封闭10min后,将50μL抗体样品加入细胞中,轻轻混匀后于4℃孵育30分钟,用0.5%BSA/PBS洗3次。加入偶联AF647的抗人IgG二抗溶液,轻轻混匀后于4℃孵育30分钟,用0.5%BSA/PBS洗3次。最后用含5μg/mL PI的PBS重悬,混匀后用流式细胞仪检测。结果显示,人源化抗体h21G4 H4K3在细胞水平上不能结合人FGFR2c细胞。HEK293-hFGFR2c-3D5 cells were collected and added to a 96-well plate, 2×10 4 cells per well, 100 μL/well. After centrifugation at 300g for 3 minutes, the supernatant was discarded, and after blocking with 50 μL 3% BSA/PBS for 10 minutes, 50 μL of antibody sample was added to the cells, gently mixed and incubated at 4°C for 30 minutes, and washed 3 times with 0.5% BSA/PBS. Anti-human IgG secondary antibody solution conjugated to AF647 was added, gently mixed and incubated at 4°C for 30 minutes, and washed 3 times with 0.5% BSA/PBS. Finally, it was resuspended with PBS containing 5 μg/mL PI, and detected by flow cytometry after mixing. The results showed that the humanized antibody h21G4 H4K3 could not bind to human FGFR2c cells at the cellular level.
(4)人源化抗体对FGF7诱导的细胞增殖阻断作用(4) Blocking effect of humanized antibodies on FGF7-induced cell proliferation
将Ba/F3-hFGFR2b-1G9细胞用不含小鼠IL-3、含2.5μg/mL的肝素和10%胎牛血清的IMDM培养基重悬细胞,按照每孔3×104个细胞,100μL/孔铺板,饥饿过夜。次日,将30ng/mL的FGF7与不同浓度的抗体等体积混合,37℃孵育15分钟。取100μL孵育完成的FGF7/抗体混合溶液加到细胞中,在5%CO2、37℃细胞培养箱中培养5天,培养完成后用Promega公司的Cell titer Glo进行检测。结果显示人源化抗体h21G4 H4K3能阻断FGF7诱导的细胞增殖活性,IC50为3.3nM,如图14所示。Ba/F3-hFGFR2b-1G9 cells were resuspended in IMDM medium containing 2.5 μg/mL heparin and 10% fetal bovine serum without mouse IL-3, and 3×10 4 cells were plated at 100 μL/well per well, and starved overnight. The next day, 30 ng/mL FGF7 was mixed with antibodies of different concentrations in equal volumes and incubated at 37°C for 15 minutes. 100 μL of the incubated FGF7/antibody mixed solution was added to the cells, cultured in a 5% CO 2 , 37°C cell culture incubator for 5 days, and detected with Promega's Cell titer Glo after the culture was completed. The results showed that the humanized antibody h21G4 H4K3 could block the cell proliferation activity induced by FGF7, with an IC 50 of 3.3 nM, as shown in Figure 14.
(5)人源化抗体ADCC活性(5) Humanized Antibody ADCC Activity
将Ba/F3-hFGFR2b-1G9细胞作为靶细胞,NK92-MI-CD16a作为效应细胞,按照效应细胞:靶细胞数=2:1,将细胞铺板于96孔U型板中,加入不同浓度的人源化抗体,37℃、5%CO2条件下孵育4个小时。孵育完后检测LDH释放。释放率=(实验孔-自发孔)÷(最大释放孔-自发孔)×100%。如图15所示的人源化抗体均具有ADCC活性,EC50介于0.50-1.36nM,其中h21G4 H4K5的EC50为0.50nM。Ba/F3-hFGFR2b-1G9 cells were used as target cells and NK92-MI-CD16a as effector cells. The cells were plated in a 96-well U-shaped plate according to the ratio of effector cells to target cells = 2: 1 . Humanized antibodies of different concentrations were added and incubated for 4 hours at 37°C and 5% CO2. LDH release was detected after incubation. Release rate = (experimental well - spontaneous well) ÷ (maximum release well - spontaneous well) × 100%. The humanized antibodies shown in Figure 15 all have ADCC activity, with EC 50 ranging from 0.50-1.36nM, of which the EC 50 of h21G4 H4K5 is 0.50nM.
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