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hey

Downloads and install

  1. Download the appropriate .tar.gz files

Tip

These binaries are built automatically with each push to the main branch and represent the latest development version.

  1. Unzip the downloaded file.

    tar -xzf <downloaded_filename.tar.gz>
  2. Make the binary executable (if necessary):

    chmod +x hey

Usage

  1. Now you can run the hey binary from your terminal:

    ./hey --help

    You might want to move the hey binary to a directory in your system's PATH (e.g., /usr/local/bin or ~/bin) to make it accessible from anywhere.

Commands showcase

  • open: Open file in server with browser.
  • tsv: Preview tsv file in a pretty way.
  • colname: Transpose and format table, showing column names and initial data rows.
  • fastq: Colorize and visualize FASTQ files, including quality scores and adapter detection.
  • sam (sam2pairwise): Convert SAM records into pairwise alignment format with highlighting.
  • stats: Concatenate and transpose columns from files into a matrix.
  • wc: Count lines, words, and characters in files (gzip supported).
  • rname: Identify instrument, flow cell type, and lane from FASTQ read names.
  • rc: Compute the reverse complement of DNA sequences.

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