Stars
MetaMDBG: a lightweight assembler for long and accurate metagenomics reads.
A bioinformatics tool for working with modified bases
Bam Error Stats Tool (best): analysis of error types in aligned reads.
a short-read polishing tool for long-read assemblies
🪡Correct and scaffold assemblies using long reads
A tool for generating consensus long-read assemblies for bacterial genomes
Fast, efficient RNA-Seq metrics for quality control and process optimization
Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
Megalodon is a research command line tool to extract high accuracy modified base and sequence variant calls from raw nanopore reads by anchoring the information rich basecalling neural network out…
Analysis pipelines from Oxford Nanopore Technologies' Research Division
RNA modifications detection from Nanopore dRNA-Seq data
Plotting tools for nanopore methylation data
🍊 💫 Trim, circularise and orient long read bacterial genome assemblies
Detection of incorrectly labeled sequences across kingdoms
Fast Fourier Transform-accelerated Interpolation-based t-SNE (FIt-SNE)
Raw nanopore signal mapper that enables real-time targeted sequencing
Detect novel (and reference) STR expansions from short-read data
A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information