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Thomas Jefferson University
- Philadelphia
- http://qradiomics.com
- https://orcid.org/0000-0001-8038-5876
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Local Deep Research achieves ~95% on SimpleQA benchmark (tested with GPT-4.1-mini) and includes benchmark tools to test on your own setup. Searches 10+ sources - arXiv, PubMed, GitHub, web, and you…
Code, examples, and instructions for the TrackRAD 2025 challenge
A software for nonlinear optimization with Quantum Hamiltonian Decent (QHD)
QATrack+ is an open source program for managing the quality control program of radiotherapy and diagnostic imaging clinics.
The Fuzzy Labs guide to the universe of open source MLOps
A graphical user interface for distributed data processing of high throughput genomics
PyRaDiSe: A Python package for DICOM-RT-based auto-segmentation pipeline construction and DICOM-RT data conversion
Solution that I provided to the 2020 challenge organized by Collège de France and Ecole Normale Supérieure of Paris. I finished 2nd out of the 98 teams/participants that participated.
Image processing tools for radiomics analysis
A game theoretic approach to explain the output of any machine learning model.
Compressed Radiation Treatment Planning [NeurIPS'24, MP'2025, PMB'23]
Opensource Python project for cancer radiation treatment planning [AAPM'23]
YOLOv3 in PyTorch > ONNX > CoreML > TFLite
YOLOv5 🚀 in PyTorch > ONNX > CoreML > TFLite
repository for Human Action Recognition using Multi-view Cameras (CCAM_E-055 Project)
Lung cancer screening radiomics
Official Pytorch implementation of GGDR (ECCV 2022)
Clinically-Interpretable Radiomics [MICCAI'22, CMPB'21]
choilab-jefferson / CIR
Forked from nadeemlab/CIRClinically-Interpretable Radiomics [MICCAI'22, CMPB'21]
choilab-jefferson / PathCNN
Forked from mskspi/PathCNNInterpretable convolutional neural networks on multi-omics data predict long-term survival in glioblastoma
personal toolbox for lidc-idri dataset / lung cancer / nodule