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Running Pre-trained Machine Learning Models in Godot.

C++ 65 6 Updated Sep 7, 2025

Adversarial Robustness Toolbox (ART) - Python Library for Machine Learning Security - Evasion, Poisoning, Extraction, Inference - Red and Blue Teams

Python 5,599 1,258 Updated Oct 20, 2025

NF-FRAGMENTOMICS PIPELINE

Nextflow 2 Updated Jun 5, 2025
Python 1,436 113 Updated Feb 15, 2025

Learn the basics of robotics through hands-on experience using ROS 2 and Gazebo simulation.

C++ 1,920 172 Updated Mar 12, 2025

Test data to be used for automated testing with the nf-core pipelines

1 Updated Jun 9, 2025

Analysis pipleine to model tumour clonal evolution from WGS data (driver annotation, quality control of copy number calls, subclonal and mutational signature deconvolution)

Nextflow 18 5 Updated Oct 16, 2025

SelectiOn in PRotein ANnotated regiOns. Adapted dN/dS based method to detect selection in specific protein regions

Python 3 Updated May 16, 2025

Single-cell RNA-Seq pipeline for barcode-based protocols such as 10x, DropSeq or SmartSeq, offering a variety of aligners and empty-droplet detection

Nextflow 295 200 Updated Oct 16, 2025

Utilities for handling Ethereum keys

TypeScript 995 297 Updated Oct 30, 2024

🎤⌨️ Acoustic keyboard eavesdropping

C++ 8,915 604 Updated Jan 15, 2023

Code and data used to create the JASPAR UCSC Genome Browser tracks data hub

Python 15 7 Updated Aug 12, 2022

A Shiny-based framework to analyze and visualize interactively genomic data

R 11 2 Updated May 11, 2023

Toolbox for molecular animations in Blender, powered by Geometry Nodes.

Python 1,091 101 Updated Oct 17, 2025

Metacell - Single-cell mRNA Analysis

R 117 30 Updated Jan 26, 2025

Metacells - Single-cell RNA Sequencing Analysis

Python 113 8 Updated Sep 27, 2024

A shiny app for metacell analysis

R 10 2 Updated Oct 19, 2025

A FASTQ read simulator

C 8 1 Updated Jun 14, 2019

fastq2bcl convert fastq files in a bcl2fastq-able run directory.

Python 11 3 Updated Oct 30, 2023

FNA - Accuracy-focused XNA4 reimplementation for open platforms

C# 2,859 306 Updated Oct 15, 2025

Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.

Python 112 31 Updated Sep 2, 2024

a long read simulator that can imitate many types of read problems

Python 245 24 Updated Jul 22, 2024

SelectiOn in PRotein ANnotated regiOns. Adapted dN/dS based method to detect selection in specific protein regions

Perl 11 3 Updated May 2, 2024

nextNEOpi: a comprehensive pipeline for computational neoantigen prediction

Nextflow 78 25 Updated Jun 6, 2025

Ten Simple Rules for Writing Dockerfiles for Reproducible Data Science

TeX 67 15 Updated Nov 11, 2020

Making it easy to write shell-like scripts in Go

Go 6,850 341 Updated Sep 16, 2025

Language and framework for high performance computational pipelines.

Go 158 24 Updated Jun 23, 2025

nextflow pipeline for 10x-sc-ARC (multiome RNA+ATAC) analysis

Python 8 2 Updated Sep 28, 2021

:neckbeard: Awesome list GitHub Wikis

383 33 Updated Oct 13, 2025
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