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1. pysradb pysradb Public

   Package for fetching metadata and downloading data from SRA/ENA/GEO

   Python 341 63

2. covmuller covmuller Public

   Covmuller is an R-package designed for analysis of SARS-CoV-2 sequencing metadata deposited on GISAID

   R 4

3. pySCTransform pySCTransform Public

   Python package to perform normalization and variance-stabilization of single-cell data

   Jupyter Notebook 25 12

4. blog blog Public

   Jupyter Notebook 2

5. gencode_regions gencode_regions Public

   Extract 3'UTR, 5'UTR, CDS, Promoter, Genes, Introns, Exons from GTF files

   Jupyter Notebook 115 51

6. smithlabcode/ribotricer smithlabcode/ribotricer Public

   A tool for accurately detecting actively translating ORFs from Ribo-seq data

   Python 39 9