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1. pepkit/pephub pepkit/pephub Public

   A web API and database for biological sample metadata

   TypeScript 20 2

2. databio/gtars databio/gtars Public

   Performance-critical tools to manipulate, analyze, and process genomic interval data. Primarily focused on building tools for geniml - our genomic machine learning python package.

   Rust 10 5

3. pepkit/pephubclient pepkit/pephubclient Public

   A tool to provide Python and CLI interface and Python API for PEPhub.

   Python 3

4. pepkit/geofetch pepkit/geofetch Public

   Builds a PEP from SRA or GEO accessions

   Python 53 6

5. pepkit/peppy pepkit/peppy Public

   Project metadata manager for PEPs in Python

   Python 37 12

6. databio/bedhost databio/bedhost Public

   API and UI for BEDbase

   TypeScript 2 1