Best Claude Code framework that actually save time. Built by a dev tired of typing "please act like a senior engineer" in every conversation.

A configuration framework that enhances Claude Code with specialized commands, cognitive personas, and development methodologies.

The minimalistic document archiving platform.

MacOS inside a Docker container.

Langflow is a powerful tool for building and deploying AI-powered agents and workflows.

An LLM-powered knowledge curation system that researches a topic and generates a full-length report with citations.

This repository contains the implementation of AutoSchemaKG, a novel framework for automatic knowledge graph construction that combines schema generation via conceptualization.

A powerful Zotero AI and MCP plugin with ChatGPT, Gemini, Claude, Grok, DeepSeek, OpenRouter, Kimi, GLM, SiliconFlow, GPT-oss, Gemma 3, Qwen 3

A simple, secure MCP-to-OpenAPI proxy server

🔐 Documentation/News/History/Guide on openpilot with Toyota/Lexus/Subaru with TSK/ECU SECURITY KEY/SecOC

Tools for pooled single cell sequencing experiments: demultiplex cells, infer doublet rate, assign treatments/sgRNAs, infer ambient RNA from allele matching

Tools to use and expand the capabilities of the original GenePT

MCP implementation that enables communication between MCP servers and OpenAI-compatible LLMs

A very quick project that transforms research papers into engaging three-person discussions, offering an intuitive and thought-provoking listening experience. Perfect for podcast enthusiasts seekin…

BioFabric is an open-source network visualization tool

Swiss army knife container for vscode development environments

Information on how to set up RStudio Workbench with SLURM Launcher and Singularity

A minimal working example of running a targets workflow using Hipergator HPC via SSH

Scripts for bioinformatics analysis of sequencing data

ask R anything

Calibrated clustering via knockoffs for single-cell genomics

Significance analysis for clustering single-cell RNA-sequencing data

Cell type annotation with local Large Language Models (LLMs) - Ensuring privacy and speed with extensive customized reports

Single RNA-seq data analysis with R (Finland, May, 2019)

scRNA multimodal analysis pipeline utilised for large dataset processing - capable in handeling scRNA, scATAC, Hastag Multiplexed samples

Explainable AI for Bioinformatics

The multi-agent framework, runtime and UI built for speed.