andrsd · andrsd · May 26, 2025 · May 26, 2025 · May 26, 2025 · May 26, 2025
diff --git a/.editorconfig b/.editorconfig
@@ -13,6 +13,10 @@ max_line_length = 100
 indent_style = space
 indent_size = 2
 
+[*.yaml]
+indent_style = space
+indent_size = 2
+
 [*.py]
 indent_style = space
 indent_size = 4

diff --git a/.github/release.yaml b/.github/release.yaml
@@ -0,0 +1,17 @@
+changelog:
+  exclude:
+    labels:
+      - ignore-for-release
+  categories:
+    - title: New Features
+      labels:
+        - enhancement
+    - title: Fixed Problems
+      labels:
+        - bug-fix
+    - title: API Changes
+      labels:
+        - api-change
+    - title: Other Changes
+      labels:
+        - "*"
diff --git a/.github/workflows/build.yaml b/.github/workflows/build.yaml
@@ -0,0 +1,96 @@
+name: build
+
+on:
+  push:
+    branches:
+      - main
+  pull_request:
+    branches:
+      - main
+
+jobs:
+  build:
+    name: "${{ matrix.os }}, ${{ matrix.build }}"
+    defaults:
+      run:
+        shell: bash -el {0}
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-22.04
+            build: Debug
+          - os: ubuntu-22.04
+            build: Release
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Set up miniconda
+        uses: conda-incubator/setup-miniconda@v3
+        with:
+          python-version: 3.9
+          auto-update-conda: false
+          channels: andrsd,defaults
+
+      - name: Checkout source
+        uses: actions/checkout@v4
+
+      - name: Install dependencies
+        run: |
+          conda install \
+            cmake \
+            make \
+            mpich-mpicxx \
+            fmt==9.1.0 \
+            yaml-cpp=0.8.0 \
+            boost \
+            lcov
+
+      - name: Configure
+        run: |
+          cmake -S ${{ github.workspace }} -B ${{ github.workspace }}/build \
+            -DCMAKE_BUILD_TYPE=${{ matrix.build }} \
+            -DTECIOCPP_WITH_MPI=YES \
+            -DTECIOCPP_BUILD_TESTS=YES \
+            -DTECIOCPP_CODE_COVERAGE=YES
+
+      - name: Build
+        run: make -C ${{ github.workspace }}/build
+
+      - name: Run tests
+        run: |
+          echo "### Test results" >> $GITHUB_STEP_SUMMARY
+          ctest --test-dir ${{ github.workspace }}/build -O test.log
+          echo "\`\`\`" >> $GITHUB_STEP_SUMMARY
+          awk 's;/^\[HANDLER_OUTPUT\]/{s=1}' test.log >> $GITHUB_STEP_SUMMARY
+          echo "\`\`\`" >> $GITHUB_STEP_SUMMARY
+
+      - name: Upload test result
+        if: always()
+        uses: actions/upload-artifact@v4
+        with:
+          name: test-results-${{ matrix.os }}-${{ matrix.build }}-petsc-${{ matrix.petsc }}
+          path: ${{ github.workspace }}/build/Testing/Temporary/LastTest.log
+
+      - name: Generate code coverage
+        run: make -C ${{ github.workspace }}/build coverage
+
+      - name: Upload coverage artifact
+        uses: actions/upload-artifact@v4
+        with:
+          name: coverage-${{ matrix.os }}-${{ matrix.build }}-petsc-${{ matrix.petsc }}
+          path: ${{ github.workspace }}/build/coverage.info
+
+  upload-to-codecov:
+    needs: [build]
+    runs-on: ubuntu-22.04
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v4
+
+      - name: Download artifacts
+        uses: actions/download-artifact@v4
+
+      - name: Upload to Codecov
+        uses: codecov/codecov-action@v4
+        with:
+          token: ${{ secrets.CODECOV_TOKEN }}
diff --git a/.github/workflows/qa.yaml b/.github/workflows/qa.yaml
@@ -0,0 +1,63 @@
+name: qa
+
+on:
+  pull_request:
+    branches:
+      - main
+
+jobs:
+  cpp-linter:
+    name: c++ linter
+    defaults:
+      run:
+        shell: bash -el {0}
+    runs-on: ubuntu-22.04
+    steps:
+      - name: Set up miniconda
+        uses: conda-incubator/setup-miniconda@v3
+        with:
+          python-version: 3.9
+          auto-update-conda: false
+          channels: andrsd,defaults
+
+      - uses: actions/checkout@v4
+
+      - name: Install dependencies
+        run: |
+          conda install \
+            cmake \
+            make \
+            mpich-mpicxx \
+            fmt==9.1.0 \
+            yaml-cpp==0.8.0 \
+            boost
+
+      - name: Configure
+        run: |
+          cmake -S ${{ github.workspace }} -B ${{ github.workspace }}/build \
+            -DTECIOCPP_WITH_MPI=YES \
+            -DTECIOCPP_BUILD_TESTS=YES \
+            -DCMAKE_EXPORT_COMPILE_COMMANDS=on
+
+      - uses: cpp-linter/cpp-linter-action@v2
+        with:
+          style: file
+          tidy-checks: ""
+          version: 14
+          lines-changed-only: true
+          ignore: "contrib"
+          step-summary: true
+          database: build
+        env:
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+
+  check-spdx-tags:
+    name: check spdx tags
+    defaults:
+      run:
+        shell: bash -el {0}
+    runs-on: ubuntu-22.04
+    steps:
+      - uses: actions/checkout@v4
+
+      - uses: kt3k/license_checker@v1.0.6
diff --git a/CMakeLists.txt b/CMakeLists.txt
@@ -19,6 +19,10 @@ option(TECIOCPP_WITH_MPI "Build with MPI support" YES)
 option(TECIOCPP_BUILD_TESTS "Build tests" NO)
 option(TECIOCPP_BUILD_TOOLS "Build tools" YES)
 
+find_package(Boost REQUIRED CONFIG)
+if (Boost_FOUND)
+    message(STATUS "Found Boost: ${Boost_INCLUDE_DIRS} (found version \"${Boost_VERSION}\")")
+endif()
 find_package(fmt 8.0 REQUIRED)
 if (TECIOCPP_WITH_MPI)
     find_package(MPI REQUIRED)

diff --git a/src/file.cpp b/src/file.cpp
@@ -6,6 +6,7 @@
 #include "teciocpp/exception.h"
 #include "teciocpp/utils.h"
 #include "TECIO.h"
+#include <algorithm>
 #include <cassert>
 
 namespace teciocpp {