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5 changes: 5 additions & 0 deletions CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -9,10 +9,15 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0

### `Fixed`

- [#431](https://github.com/nf-core/modules/pull/4781#event-11555493525) Updated kaiju2table module to report taxon names (fix by @Joon-Klaps)
- [#430](https://github.com/nf-core/taxprofiler/pull/430) Fix the fastq output in the module LONGREAD_HOSTREMOVAL. (fix by @LilyAnderssonLee)

### `Dependencies`

| Tool | Previous version | New version |
| ----- | ---------------- | ----------- |
| kaiju | 1.8.2 | 1.10.0 |

### `Deprecated`

## v1.1.3 - Augmented Akita Patch [2024-01-12]
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6 changes: 3 additions & 3 deletions modules.json
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Expand Up @@ -103,17 +103,17 @@
},
"kaiju/kaiju": {
"branch": "master",
"git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
"git_sha": "3db50674956b1fb3741a44eb917458d788a50197",
"installed_by": ["modules"]
},
"kaiju/kaiju2krona": {
"branch": "master",
"git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
"git_sha": "3db50674956b1fb3741a44eb917458d788a50197",
"installed_by": ["modules"]
},
"kaiju/kaiju2table": {
"branch": "master",
"git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
"git_sha": "3db50674956b1fb3741a44eb917458d788a50197",
"installed_by": ["modules"]
},
"kmcp/profile": {
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7 changes: 7 additions & 0 deletions modules/nf-core/kaiju/kaiju/environment.yml

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20 changes: 17 additions & 3 deletions modules/nf-core/kaiju/kaiju/main.nf

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9 changes: 5 additions & 4 deletions modules/nf-core/kaiju/kaiju/meta.yml

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117 changes: 117 additions & 0 deletions modules/nf-core/kaiju/kaiju/tests/main.nf.test

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8 changes: 8 additions & 0 deletions modules/nf-core/kaiju/kaiju/tests/main.nf.test.snap

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2 changes: 2 additions & 0 deletions modules/nf-core/kaiju/kaiju/tests/tags.yml

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7 changes: 7 additions & 0 deletions modules/nf-core/kaiju/kaiju2krona/environment.yml

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19 changes: 16 additions & 3 deletions modules/nf-core/kaiju/kaiju2krona/main.nf

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5 changes: 2 additions & 3 deletions modules/nf-core/kaiju/kaiju2krona/meta.yml

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