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Merged
merged 1 commit into from
May 28, 2024
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refactor #561

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7 changes: 0 additions & 7 deletions .github/workflows/download_pipeline.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -77,10 +77,3 @@ jobs:
NXF_SINGULARITY_CACHEDIR: ./
NXF_SINGULARITY_HOME_MOUNT: true
run: nextflow run ./${{ env.REPOTITLE_LOWERCASE }}/$( sed 's/\W/_/g' <<< ${{ env.REPO_BRANCH }}) -stub -profile test,singularity --outdir ./results
- name: Run the downloaded pipeline (stub run not supported)
id: run_pipeline
if: ${{ job.steps.stub_run_pipeline.status == failure() }}
env:
NXF_SINGULARITY_CACHEDIR: ./
NXF_SINGULARITY_HOME_MOUNT: true
run: nextflow run ./${{ env.REPOTITLE_LOWERCASE }}/$( sed 's/\W/_/g' <<< ${{ env.REPO_BRANCH }}) -profile test,singularity --outdir ./results
7 changes: 7 additions & 0 deletions CHANGELOG.md
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Expand Up @@ -48,6 +48,13 @@ Parameter has been removed if new parameter information isn't present.
| bwa | 0.7.17 | 0.7.18 |
| CADD | 1.6.1 | 1.6.post1 |
| Sentieon | 202308.01 | 202308.02 |
| bwameme | | 1.0.6 |

:::note
Version has been updated if both old and new version information is present.
Version has been added if just the new version information is present.
Version has been removed if new version information isn't present.
:::

## 2.0.1 - Asterix (Patch) [2024-03-25]

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