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@nf-cmgg

Center For Medical Genetics Ghent - Nextflow workflows

Center For Medical Genetics Ghent - Ghent University Hospital - Nextflow workflows

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  1. structural structural Public

    A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region expansions (RREs) from short DNA reads

    Nextflow 23 2

  2. smallvariants smallvariants Public

    A nextflow pipeline for calling and annotating small germline variants from short DNA reads for WES and WGS data

    Nextflow 12 3

  3. preprocessing preprocessing Public

    Preprocessing workflow for sequencing data at CMGG

    Nextflow 5 4

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