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Starred repositories

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A CLI code-typing game that turns your source code into typing challenges

Rust 408 11 Updated Oct 9, 2025

Opinionated Arch/Hyprland Setup

Shell 12,975 1,230 Updated Oct 9, 2025
Python 843 52 Updated Sep 27, 2025

Influenza genome analysis Nextflow workflow

Nextflow 23 11 Updated Sep 15, 2025

Efficient merging of structural variants from multiple SV callers and samples

Python 26 1 Updated Sep 25, 2025

A focused launcher for your desktop — native, fast, extensible

C++ 2,887 68 Updated Oct 10, 2025
Nextflow 2 1 Updated Sep 11, 2025

Chrome and Firefox extension for Conventional Comments in GitHub UI.

JavaScript 95 8 Updated Sep 11, 2025

Self-hosted GitHub Actions runners made simple. For AWS. 10x cheaper, 30% faster, and unlimited caching. Best alternative to Actions Runner Controller.

Shell 882 33 Updated Oct 5, 2025

Use various fgbio functions and classes in your Nextflow scope.

Groovy 5 Updated May 21, 2025

A tool to standardize VCF files from structural variant callers

Go 4 1 Updated Jul 15, 2025

ctDNA Analysis pipeline. Version 1.0.0

Python 6 3 Updated Oct 9, 2025

Framework for Operational Radiometric Correction for Environmental monitoring

C 186 56 Updated Oct 2, 2025
Nextflow 1 Updated Jun 18, 2025

Simplifying Bioinformatics Workflows through a Containerized Approach to Tool Integration and Management

Shell 6 1 Updated Jul 7, 2025

Bioinformatics web-platform visualisation dashboard creation

Python 22 Updated Oct 6, 2025

Repository containing scripts to generate optimized configurations for resource utilization for nf-core AWS Megatests.

Python 2 1 Updated May 2, 2025
Nextflow 8 7 Updated Sep 4, 2025

Nextflow plugin for nf-core utils

Groovy 1 Updated Sep 12, 2025

Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines

Groovy 45 28 Updated Sep 25, 2025

Where new ideas for nf-core pipelines, special interest groups and more are proposed

8 3 Updated Sep 26, 2025

expressions on VCFs

Rust 85 4 Updated Apr 19, 2025

A tool to map bisulfite converted sequence reads and determine cytosine methylation states

HTML 1 Updated Apr 6, 2025

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

Nextflow 1,110 801 Updated Sep 18, 2025

analysis pipeline for somatic diagnosis on ctDNA

Nextflow 2 Updated Jun 13, 2025

Command and Conquer: Red Alert

C++ 6,474 1,274 Updated Feb 27, 2025

Command & Conquer: Remastered Collection

C++ 21,205 5,425 Updated Jan 16, 2025

An ontology for domestic cats developed for a group assignment in CS3613: Introduction to Artificial Intelligence

2 Updated Dec 27, 2022

Grabbing genome accessions & download info based on taxonomy, using the NCBI REST API, w00t

Python 12 1 Updated Feb 23, 2025

Making RNA-based models accessible to all.

Jupyter Notebook 9 1 Updated Feb 15, 2025
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