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SWAT4LS 2008: Edinburgh, UK
- Albert Burger, Adrian Paschke, Paolo Romano, Andrea Splendiani:
Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences ( SWAT4LS ) Edinburgh, United Kingdom, November 28, 2008. CEUR Workshop Proceedings 435, CEUR-WS.org 2008 - Preface.
Oral Communications
- Heiko Dietze, Michael Schroeder:
GoWeb: A Semantic Search Engine for the Life Science Web. - George Zheng, Athman Bouguettaya:
PathExplorer: Service Mining for Biological Pathways on the Web. - Simon Jupp, Robert Stevens, Sean Bechhofer, Yeliz Yesilada, Patty Kostkova:
Knowledge Representation for Web Navigation. - Erick Antezana, Ward Blondé, Mikel Egaña, Alistair Rutherford, Robert Stevens, Bernard De Baets, Vladimir Mironov, Martin Kuiper:
Structuring the Life Science Resourceome for Semantic Systems Biology: Lessons from the BioGateway Project. - Nadia Anwar, Ela Hunt, Walter Kolch, Andrew Pitt:
Semantic Data Integration for Francisella tularensis novicida Proteomic and Genomic Data. - Robert Bossy, Alain Kotoujansky, Sophie Aubin, Claire Nedellec:
Close Integration of ML and NLP Tools in BioAlvis for Semantic Search in Bacteriology. - María del Mar Roldán-García, Ismael Navas-Delgado, Amine Kerzazi, Othmane Chniber, Joaquin J. Molina-Castro, José Francisco Aldana-Montes:
KASBi: Knowledge-Based Analysis in Systems Biology. - Antonio Jimeno-Yepes, Ernesto Jiménez-Ruiz, Rafael Berlanga Llavori, Dietrich Rebholz-Schuhmann:
Use of Shared Lexical Resources for Efficient Ontological Engineering.
Highlight Posters
- Anna-Lena Lamprecht, Tiziana Margaria, Bernhard Steffen:
Supporting Process Development in Bio-jETI by Model Checking and Synthesis. - Marco Roos, M. Scott Marshall, Andrew P. Gibson, Pieter W. Adriaans:
Structuring Mined Knowledge for the Support of Hypothesis Generation in Molecular Biology. - Dongeun Sun, Seongbin Park, Hyosook Jung:
Knowledge Management Using Wikipedia. - Wee Tiong Ang, Rajaraman Kanagasabai, Christopher J. O. Baker:
Knowledge Translation: Computing the Query Potential of Bio-ontologies.
Posters
- Erick Antezana, Ward Blondé, Mikel Egaña, Alistair Rutherford, Robert Stevens, Bernard De Baets, Vladimir Mironov, Martin Kuiper:
BioGateway: Integrated RDF for Life Science Queries. - Genevieve Mae Aquino, Jeffrey Detras, Rosemary Shrestha, Martin Senger, Kevin Manansala, Elizabeth Arnaud, Reinhard Simon, Jayashree Balaiji, Thomas Hazekamp, Guy Davenport, Graham McLaren, Theo J. L. van Hintum, Richard M. Bruskiewich:
The Generation Challenge Programme Model Driven Architecture: Scientific Domain Model and Ontology. - Erick Antezana, Mikel Egaña, Ward Blondé, Robert Stevens, Bernard De Baets, Vladimir Mironov, Martin Kuiper:
The Cell Cycle Ontology: An Application Ontology Supporting the Life Sciences. - Janna Hastings, Kirill Degtyarenko, Paula de Matos, Marcus Ennis, Christoph Steinbeck:
The ChEBI Ontology: An Ontology for Chemistry within a Biological Context. - Anupam Bhattacharjee, Aminul Islam, Mohammad Shafkat Amin, Shahriyar Hossain, Shazzad Hosain, Hasan Jamil
:
LifeDB: An Autonomous System for Semantic Integration of Life Science Data on Hidden Web. - Michaela Gündel, Ciro Scognamiglio, Marco Brandizi, Andrea Splendiani:
The DC-THERA Directory: A Knowledge Management System to Support Collaboration on Dendritic Cell and Immunology Research. - Karen Sutherland, Albert Burger:
Goal-Oriented Task Composition for Bioinformatics. - José Antonio Miñarro-Giménez, Marisa Madrid, Jesualdo Tomás Fernández-Breis:
An Integrated Ontological Knowledge Base About Orthologous Genes and Proteins. - Norio Kobayashi, Tetsuro Toyoda:
Penta and Hexa Statements are Suitable for Representing Omics Knowledge on the Semantic Web. - Vassil Momtchev, Georgi Georgiev, Deyan Peychev:
LifeSKIM: Application for Large Scale Biomedical Semantic Annotations. - Norio Kobayashi, Yuko Makita, Eli Kaminuma, Shuji Kawaguchi, Yuko Yoshida, Yoshiki Mochizuki, Akihiro Matsushima, Manabu Ishii, Ryo Umetsu, Satomi Asano, Naohiko Heida, Tetsuya Sakurai, Takashi Kuromori, Kazuo Shinozaki, Tetsuro Toyoda:
A Secure Data Repository Integrating Huge Volumes of Digital Contents as a Semantic Web. - Tiago Franco, José Júlio Alferes, Ludwig Krippahl, Ricardo Amador:
Bio-informatics Reactivity Features Through the Semantic Web. - Gayo Diallo, Gemma Madle, Gawesh Jawaheer, Patty Kostkova, Dimitra Alexopoulou, Robert Stevens, Simon Jupp, Khaled Khelif:
A User-Centred Evaluation Framework for the SeaLife Semantic Web Browsers.
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