Fig. 4: Superoxide from Cpd III mediates the cooperative catalysis of two distant pockets. | Nature

Fig. 4: Superoxide from Cpd III mediates the cooperative catalysis of two distant pockets.

From: Chanoclavine synthase operates by an NADPH-independent superoxide mechanism

Fig. 4

a, Detailed inhibitory data of superoxide scavenger tempol towards EasCCf activity. The reaction system generally consisted of 20 μM enzyme, 0.5 mM PCC and 2 mM NADPH. A triplicate assay was conducted. The enzyme activity of each sample was calculated as a percentage of the control sample. The individual (n = 3) and average values along with error bars (s.d.) of each group in one representative experiment among three independent experiments are shown. b, High-performance liquid chromatography (HPLC) profiles of the restoration of SOTS-1 of the tempol-inhibited EasCCf activity. HPLC profiles were recorded at λ = 320 nm. SOTS-1 (8 mM) was directedly added to reaction mixtures, which were incubated with the superoxide scavenger tempol (10 mM) in advance. c, HPLC profiles of the Xox system (312 μM per 5 mU) restoration of tempol-inhibited EasCCf activity. HPLC profiles were recorded at λ = 320 nm. The Xox system was directedly added to the EasC reaction mixtures, which were incubated with the superoxide scavenger tempol (10 mM) in advance. d, HRMS of CC isolated from the competitive incorporation experiment with 18O-superoxide. 18O-labelled CC [M + H]+ m/z: calculated 259.1696 and observed 259.1689. The blue line displays the data for the control group without the addition of 18O-superoxide, whereas the red line displays the data for the experimental group with the addition of O18-superoxide. This diagram shows the relative abundance of each component, with the molecular weight of 257 set as 100%. EasC noted in the figure is EasCCf.

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