Extended Data Fig. 7: Cross-individual correlation vs. top eQTL allele frequency for all tested models. | Nature Genetics

Extended Data Fig. 7: Cross-individual correlation vs. top eQTL allele frequency for all tested models.

From: Personal transcriptome variation is poorly explained by current genomic deep learning models

Extended Data Fig. 7

Cross-individual correlations for (a) Enformer, (b) Basenji2, (c) ExPecto, and (d) Xpresso compared to the global minor allele frequency (from Ensembl biomaRt) of the most statistically significant Geuvadis eQTL in each gene. For each model, the Pearson correlation and line of best fit using ordinary least squares are shown separately for genes with positive and negative cross-individual correlations (orange and green, respectively).

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