Commits

Branch selector

 v5.1.0

User selector

All users

Datepicker

All time

Commit History

Commits on Mar 17, 2023

• Merge pull request #318 from biowdl/shallow_mode

  Show description for c2b179a
  DavyCats

  authored
  c2b179a

  Copy full SHA for c2b179a

Commits on Mar 10, 2023

• update parameter_meta and changelog

  DavyCats

  committed
  36a4575

  Copy full SHA for 36a4575

Commits on Mar 3, 2023

• add purple options needed for shallow mode

  DavyCats

  committed
  5d35105

  Copy full SHA for 5d35105

• add option to enable/disable ploy-g trimming to fastp task

  DavyCats

  committed
  ab54bb5

  Copy full SHA for ab54bb5

Commits on Feb 23, 2023

• Merge pull request #317 from biowdl/fastp_update

  Show description for d2f3c9e
  DavyCats

  authored
  d2f3c9e

  Copy full SHA for d2f3c9e

• add some options to disable filters in fastp

  DavyCats

  committed
  eba9ad4

  Copy full SHA for eba9ad4

Commits on Feb 17, 2023

• Merge pull request #316 from biowdl/fastp

  Show description for 9e946c7
  DavyCats

  authored
  9e946c7

  Copy full SHA for 9e946c7

• Merge remote-tracking branch 'origin/develop' into fastp

  DavyCats

  committed
  19652d8

  Copy full SHA for 19652d8

• Merge pull request #312 from biowdl/somaticSv

  Show description for 07c44ca
  DavyCats

  authored
  07c44ca

  Copy full SHA for 07c44ca

Commits on Feb 16, 2023

• update scripts

  DavyCats

  committed
  7b9e076

  Copy full SHA for 7b9e076

• update changelog

  DavyCats

  committed
  6694286

  Copy full SHA for 6694286

• Merge remote-tracking branch 'origin/develop' into somaticSv

  DavyCats

  committed
  2761d30

  Copy full SHA for 2761d30

• update scripts

  DavyCats

  committed
  ad97efa

  Copy full SHA for ad97efa

• update changelog

  DavyCats

  committed
  c3f246f

  Copy full SHA for c3f246f

• Merge remote-tracking branch 'origin/develop' into fastp

  DavyCats

  committed
  5a4ceb3

  Copy full SHA for 5a4ceb3

Commits on Feb 10, 2023

• Merge pull request #315 from biowdl/BIOWDL-604

  Show description for bfabd79
  rhpvorderman

  authored
  bfabd79

  Copy full SHA for bfabd79

• Add missing interpunction

  rhpvorderman

  committed
  b3c9204

  Copy full SHA for b3c9204

• Update changelog with separatorChar

  rhpvorderman

  committed
  84a8781

  Copy full SHA for 84a8781

• Allow a custom separator char

  rhpvorderman

  committed
  3961ab4

  Copy full SHA for 3961ab4

Commits on Feb 6, 2023

• add samples option to bcftools view

  DavyCats

  committed
  d320b3c

  Copy full SHA for d320b3c

Commits on Feb 1, 2023

• fix gridss somatic filter output paths?

  DavyCats

  committed
  b17076a

  Copy full SHA for b17076a

• fix output paths gridss somatic filter

  DavyCats

  committed
  42796e3

  Copy full SHA for 42796e3

Commits on Jan 31, 2023

• add missing fasta index input to gridss GeneratePonBedpe

  DavyCats

  committed
  4834041

  Copy full SHA for 4834041

• give delly more time, specify normal ordinal in gridss GeneratePonBedpe command

  DavyCats

  committed
  dd9ea3d

  Copy full SHA for dd9ea3d

Commits on Jan 27, 2023

• update parameter_meta

  DavyCats

  committed
  71193e8

  Copy full SHA for 71193e8

• add index to delly call inputs as well

  DavyCats

  committed
  9af2205

  Copy full SHA for 9af2205

• add bcf index input for delly somatic filter

  DavyCats

  committed
  1bf7725

  Copy full SHA for 1bf7725

• increase time for manta, add index to delly outputs

  DavyCats

  committed
  ee0b137

  Copy full SHA for ee0b137

• Merge pull request #314 from biowdl/fix_arg_space

  Show description for 44781d1
  DavyCats

  authored
  44781d1

  Copy full SHA for 44781d1

• Update CHANGELOG.md

  johnmous

  authored
  b79e59b

  Copy full SHA for b79e59b

• Add space between flag and the value following

  johnmous

  authored
  6d03295

  Copy full SHA for 6d03295

Commits on Jan 26, 2023

• Merge remote-tracking branch 'origin/develop' into somaticSv

  DavyCats

  committed
  c85f016

  Copy full SHA for c85f016

• add missing paramter_meta

  DavyCats

  committed
  2b4fb7e

  Copy full SHA for 2b4fb7e

• Merge pull request #313 from biowdl/macs2_flags

  Show description for 24f6a06
  DavyCats

  authored
  24f6a06

  Copy full SHA for 24f6a06

• Update CHANGELOG.md

  johnmous

  authored
  ece0782

  Copy full SHA for ece0782

Pagination

Previous

Next