Hello,
I am attempting to colour and group sections of a large pESI plasmid. I have 7 different groups along the plasmid backbone and have grouped all of these genes within a CSv file attributing the genes to the correct groups as well as a colour CSV file with the appropriate colours that theses groupd should have. The problem i am facing is that whne i create the Clinker some groups are being coloured incorrectly whilst its also just not grouping certain genes into the groups i have defined. Is there anyway to force Clinker to group and colour according to my parameters? I have attached the files below in case you wanted to see what i have been trying along with the command i am running.

clinker rep_H211340782_plas_col.gbk rep_H204960951_plas_col.gbk rep_H153520460_plas_col.gbk rep_H213340902_plas_col.gbk -gf genes.csv -cm colours.csv -p -ufo

colours.csv
genes.csv

I have also uploaded the GBK files (as TXT files as they aren't supported)
rep_H153520460_plas_col.txt
rep_H204960951_plas_col.txt
rep_H211340782_plas_col.txt
rep_H213340902_plas_col.txt