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Jie Chen 0001
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Publications
- 2025
- [j53]Xudong Liu, Zhiwei Nie
, Haorui Si, Xurui Shen, Yutian Liu, Xiansong Huang, Tianyi Dong, Fan Xu, Zhixiang Ren, Peng Zhou, Jie Chen:
Generative prediction of real-world prevalent SARS-CoV-2 mutation with in silico virus evolution. Briefings Bioinform. 26(3) (2025) - [j52]Zhiwei Nie
Predicting protein stability changes upon mutations with dual-view ensemble learning from single sequence. Briefings Bioinform. 26(4) (2025) - [j49]Zhiwei Nie
A Unified Peptide Generative Framework via a Weakly Order-Dependent Autoregressive Language Model and Lifelong Learning. J. Chem. Inf. Model. 65(15): 7919-7935 (2025) - [j46]Zhiwei Nie
A unified evolution-driven deep learning framework for virus variation driver prediction. Nat. Mac. Intell. 7(1): 131-144 (2025) - [i53]Zhiwei Nie, Hongyu Zhang, Hao Jiang, Yutian Liu, Xiansong Huang, Fan Xu, Jie Fu, Zhixiang Ren, Yonghong Tian, Wen-Bin Zhang, Jie Chen:
OmniESI: A unified framework for enzyme-substrate interaction prediction with progressive conditional deep learning. CoRR abs/2506.17963 (2025) - 2023
- [j37]Yitian Fang
AFP-MFL: accurate identification of antifungal peptides using multi-view feature learning. Briefings Bioinform. 24(1) (2023) - [j36]Jie Chen, Zhiwei Nie
Running ahead of evolution - AI-based simulation for predicting future high-risk SARS-CoV-2 variants. Int. J. High Perform. Comput. Appl. 37(6): 650-665 (2023) - [c83]Pengchong Qiao, Zhidan Wei, Yu Wang, Zhennan Wang, Guoli Song, Fan Xu, Xiangyang Ji, Chang Liu, Jie Chen:
Fuzzy Positive Learning for Semi-Supervised Semantic Segmentation. CVPR 2023: 15465-15474 - [c73]Hongliang He, Jun Wang, Pengxu Wei, Fan Xu, Xiangyang Ji, Chang Liu, Jie Chen:
TopoSeg: Topology-Aware Nuclear Instance Segmentation. ICCV 2023: 21250-21259 - 2022
- [i28]Zhennan Wang, Kehan Li, Runyi Yu, Yian Zhao, Pengchong Qiao, Guoli Song, Fan Xu, Jie Chen:
Difference in Euclidean Norm Can Cause Semantic Divergence in Batch Normalization. CoRR abs/2207.02625 (2022) - 2020
- [c37]Lijuan Duan, Xuan Feng, Jie Chen, Fan Xu:
An Automated Method with Feature Pyramid Encoder and Dual-Path Decoder for Nuclei Segmentation. PRCV (1) 2020: 341-352
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